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    93 repositories

    • digital-form-builder

      Public
      Exploring how to quickly and easily design/prototype/deploy high quality digital forms for UK Gov. Based on the excellent work by DEFRA. Currently maintained by [email protected] at Caution Your Blast and a community collaboration between FCDO, HO, GDS, DfE, DIT, Version 1
      TypeScript
      •
      MIT License
      •35•2•0•8•Updated Feb 7, 2025Feb 7, 2025

    • SOMA

      Public
      A Nextflow pipeline designed to classify, align and assemble short-read metagenomic sequencing data.
      Nextflow
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

    • LOMA

      Public
      A Nextflow pipeline designed to classify, align and assemble nanopore metagenomic reads.
      metagenomic-pipelineoxford-nanopore-sequencing
      Nextflow
      •
      GNU General Public License v3.0
      •0•12•1•0•Updated Feb 6, 2025Feb 6, 2025

    • devops-github-reusable-workflows

      Public
      Repo containing Github Reusable Workflows. Repo managed by devops-github-repos
      0•0•0•3•Updated Feb 6, 2025Feb 6, 2025

    • devops-terraform-example-project

      Public
      Example for demonstrating ECS-based project created using IaC. Repo managed by devops-github-repos
      HCL
      •0•0•0•1•Updated Feb 5, 2025Feb 5, 2025

    • Mustard_and_Finnie

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 5, 2025Feb 5, 2025

    • pygom

      Public
      ODE modelling in Python
      Python
      •
      GNU General Public License v2.0
      •20•27•39•3•Updated Feb 3, 2025Feb 3, 2025

    • winter-2023-24-respiratory-forecasts

      Public
      Repository holding the operational code used to forecast COVID, Influenza & RSV over winter 2023/24
      R
      •1•9•0•0•Updated Jan 14, 2025Jan 14, 2025

    • devops-terraform-modules

      Public
      UKHSA Terraform Modules to deliver a IaC self-service platform. Repo managed by devops-github-repos
      HCL
      •
      MIT License
      •0•0•0•0•Updated Jan 14, 2025Jan 14, 2025

    • devops-github-actions

      Public
      Repo containing reusable Github Actions. Repo managed by devops-github-repos
      0•0•0•0•Updated Jan 13, 2025Jan 13, 2025

    • epiviz

      Public
      Epidemiological Data Visualisation
      R
      •
      Other
      •0•0•1•0•Updated Jan 10, 2025Jan 10, 2025

    • SmallpoxSomaliaReleased

      Public
      0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

    • epidm

      Public
      Epidemiological Data Management
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jan 2, 2025Jan 2, 2025

    • PHEindicatormethods

      Public
      R
      •
      GNU General Public License v3.0
      •15•27•12•1•Updated Dec 13, 2024Dec 13, 2024

    • devops-terraform-template

      Public template
      . Repo managed by devops-github-repos
      0•0•0•0•Updated Dec 5, 2024Dec 5, 2024

    • ukhsa-science-research-site-dev

      Public
      HTML
      •
      MIT License
      •4•0•0•0•Updated Nov 27, 2024Nov 27, 2024

    • ukhsa-science-research-site

      Public
      HTML
      •
      MIT License
      •4•1•0•0•Updated Nov 27, 2024Nov 27, 2024

    • UKHSA-Approved-Tech-and-Tools

      Public
      0•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • devops-terraform-ci

      Public
      Container image used to run CI pipelines. Repo managed by devops-github-repos
      Shell
      •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • ntbs_Beta

      Public
      C#
      •1•2•0•66•Updated Nov 12, 2024Nov 12, 2024

    • devops-hello-world-front

      Public
      Frontend component of the DevOps example project. Repo managed by devops-github-repos
      Python
      •0•0•0•1•Updated Nov 7, 2024Nov 7, 2024

    • devops-hello-world-api

      Public
      API component of the DevOps example project. Repo managed by devops-github-repos
      0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

    • statistics-production-hub

      Public
      A hub to host our best practice guidance resources.
      Ruby
      •
      MIT License
      •1•3•1•0•Updated Oct 16, 2024Oct 16, 2024

    • ntbs-reporting

      Public
      TSQL
      •0•2•0•0•Updated Oct 15, 2024Oct 15, 2024

    • ggbreak

      Public
      One-function R package for adding a y-axis break symbol to a ggplot object
      data-visualization
      R
      •
      Other
      •1•1•0•0•Updated Oct 8, 2024Oct 8, 2024

    • within-patient-pOXA48-conjugation

      Public
      An analysis on Plasmid conjugation for within-patient plasmid diversity
      HTML
      •0•0•0•0•Updated Sep 27, 2024Sep 27, 2024

    • drivers_epidemic_dynamics_from_nhs_covid19_app

      Public
      Code for the publication "Drivers of epidemic dynamics in real time from daily digital COVID-19 measurements" by Kendall et al.
      R
      •0•1•0•0•Updated Jun 12, 2024Jun 12, 2024

    • SDLC

      Public
      0•0•0•0•Updated May 17, 2024May 17, 2024

    • UKPID-Backend

      Public
      Public mirror of the UKPID Backend application currently in development by Juicy Media.
      PHP
      •
      MIT License
      •0•0•0•0•Updated Apr 19, 2024Apr 19, 2024

    • UKPID-Frontend

      Public
      Public mirror of the UKPID Desktop application currently in development by Juicy Media.
      Vue
      •
      MIT License
      •0•0•0•0•Updated Mar 26, 2024Mar 26, 2024