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@openneuropet

Open NeuroPET

Brain PET data sharing, data curation tools, processing pipelines, molecular templates

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  1. PET2BIDS PET2BIDS Public

    PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @JOSS https://doi.org/10.21105/joss.06067

    Python 27 22

  2. molecular_atlases molecular_atlases Public

    Download molecular atlases (serotonin, GABA)

    3 1

  3. outreach outreach Public

    talks, posters, educational material, everything we do is free and open

    Jupyter Notebook 4 10

  4. derivatives derivatives Public

    MATLAB 2

  5. PET_pipelines PET_pipelines Public

    A suite of brain PET processing pipelines

    Python 14 6

  6. BrainPET-metadata-examples BrainPET-metadata-examples Public

    A collection of shared metadata to illustrate and learn from each other on how we store information about PET tracers and blood analyses

    1

Repositories

Showing 10 of 22 repositories
  • outreach Public

    talks, posters, educational material, everything we do is free and open

    openneuropet/outreach’s past year of commit activity
    Jupyter Notebook 4 10 9 2 Updated Apr 2, 2025
  • ezbids Public Forked from brainlife/ezbids

    A web service for semi-automated conversion of raw imaging data to BIDS

    openneuropet/ezbids’s past year of commit activity
    Vue 0 MIT 15 0 0 Updated Mar 28, 2025
  • multiverse_tools Public

    tools helping with multiverse analyses

    openneuropet/multiverse_tools’s past year of commit activity
    R 0 MIT 0 1 0 Updated Mar 5, 2025
  • PET2BIDS Public

    PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @Joss https://doi.org/10.21105/joss.06067

    openneuropet/PET2BIDS’s past year of commit activity
    Python 27 MIT 22 9 1 Updated Feb 19, 2025
  • petdeface Public

    A nipype implementation of an anatomical MR and PET defacing pipeline for BIDS datasets

    openneuropet/petdeface’s past year of commit activity
    Python 2 2 5 2 Updated Jan 16, 2025
  • PET_pipelines Public

    A suite of brain PET processing pipelines

    openneuropet/PET_pipelines’s past year of commit activity
    Python 14 6 1 1 Updated Jan 6, 2025
  • bids-specification Public Forked from bids-standard/bids-specification

    Brain Imaging Data Structure (BIDS) Specification

    openneuropet/bids-specification’s past year of commit activity
    Python 0 CC-BY-4.0 175 0 0 Updated Dec 19, 2024
  • app-petdeface Public

    PET Deface Packaged as a Brainlife.io app

    openneuropet/app-petdeface’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 9, 2024
  • nifti_fixer Public

    fixes niftis that aren't quite ready for BIDS

    openneuropet/nifti_fixer’s past year of commit activity
    Python 0 0 2 0 Updated Dec 6, 2024
  • local_bids_validation Public
    openneuropet/local_bids_validation’s past year of commit activity
    Python 0 MIT 0 3 (1 issue needs help) 0 Updated Nov 12, 2024
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