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ica_reclassify logger fix #1
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handwerkerd
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Open
ica_reclassify logger fix #1
handwerkerd
wants to merge
18
commits into
martinezeguiluz:Fix_empty_file
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handwerkerd:Fix_empty_file_DH
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* docs: update README.md * docs: update .all-contributorsrc --------- Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Signed-off-by: fazledyn-or <[email protected]>
* added version numbers * Add lib info to html report
* docs: update README.md * docs: update .all-contributorsrc --------- Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com> Co-authored-by: Dan Handwerker <[email protected]> Co-authored-by: handwerkerd <[email protected]>
* Update index.rst Changed newsletter from TinyLetter to new google groups link. * Update README.md Changed newsletter link from TinyLetter to Google Groups * Update README.md Changed the content from tinyletter to google groups * Update support.rst updated newsletter link to google groups * Update README.md Co-authored-by: Eneko Uruñuela <[email protected]> * Update docs/index.rst Co-authored-by: Eneko Uruñuela <[email protected]> * Update README.md * Update support.rst * Update README.md --------- Co-authored-by: Eneko Uruñuela <[email protected]>
…E-ICA#1018) * docs: update README.md * docs: update .all-contributorsrc --------- Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
* Run new version of black. * Run isort.
…E-ICA#1024) * Create dependabot.yml * Drop release drafter in favor of release config.
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 2 to 5. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@v2...v5) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 2 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v2...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Base versions on last CircleCI 3.8 env build. * Base max versions on 3.12 test. * Set minimum versions too. * Update pyproject.toml Co-authored-by: Dan Handwerker <[email protected]> --------- Co-authored-by: Dan Handwerker <[email protected]>
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@martinezeguiluz Thank you so much for working on this and I apologize for my delay reviewing.
I noticed one subtle issue. In your PR, you are calling
LGR.warning
but that happens beforeutils.setup_loggers
is called to set up the logger to actually log the warnings. In this PR, I'm movingutils.setup_loggers
higher up in the function so that the warnings you added will now be appropriated logged.Once you merge this PR into yours (assuming you don't see any new issues) I'm fine approving.
(Also, I've been running tedana with python 3.12 and there are a couple more style complaints in
pca.py
andselection_nodes.py
that weren't flagged with older versions of python. To make the linter happy, I just corrected them here.