Fix links

UPPMAX · Jan 14, 2025 · a4ffa13 · a4ffa13
1 parent 342dbe6
commit a4ffa13
Show file tree

Hide file tree

Showing 8 changed files with 20 additions and 20 deletions.
diff --git a/docs/beginner/exercises.md b/docs/beginner/exercises.md
@@ -8,7 +8,7 @@
 
 ???+ question "View in IGV"
 
-    - Load the genome, the bam file, and the annotated *vcf* that we got from the [demo](https://uppmax.github.io/bianca_workshops/modules/#workflows) into IGV for viewing
+    - Load the genome, the bam file, and the annotated *vcf* that we got from the [demo](https://uppmax.github.io/bianca_workshops/modules) into IGV for viewing
 
         ??? tip "Answer"
 

diff --git a/docs/beginner/slurm_intro.md b/docs/beginner/slurm_intro.md
@@ -355,9 +355,9 @@ srun echo Hello world!
 
     Intermediate workshop material on Slurm:
 
-    - [complex jobs](intermediate/complex_jobs.md)
-    - [efficient jobs](intermediate/efficient_jobs.md)
-    - [replicate jobs](intermediate/complex_jobs.md)
+    - [complex jobs](../intermediate/complex_jobs.md)
+    - [efficient jobs](../intermediate/efficient_jobs.md)
+    - [replicate jobs](../intermediate/complex_jobs.md)
 
 !!! admonition "Slurm Cheat Sheet"
 

diff --git a/docs/evaluations/20240419/README.md b/docs/evaluations/20240419/README.md
@@ -9,7 +9,7 @@
 
 This is an anonymous evaluation
 and will ideally be published in raw form at
-https://github.com/UPPMAX/bianca_workshops/tree/main/evaluations/20240419 .
+https://uppmax.github.io/bianca_workshops/evaluations/20240419/ .
 To do so, please do not share sensitive data here!
 
 Below are tallies, i.e. add one character behind each

diff --git a/docs/intermediate/install.md b/docs/intermediate/install.md
@@ -41,7 +41,7 @@
 
 ???- tip "Forgot how to use the module system?"
 
-    See [the basic Bianca course page 'Using the module system'](../modules.md).
+    See [the basic Bianca course page 'Using the module system'](../beginner/modules.md).
 
 - **Lots of programs and tools installed as modules** on Bianca.
     - You can **request installations** but that **may take several days or weeks** to be handled by the application experts at UPPMAX.

diff --git a/docs/intermediate/prevaluation_intermediate.md b/docs/intermediate/prevaluation_intermediate.md
@@ -11,7 +11,7 @@ The prevaluation form can be found `[not here anymore]`.
 
 ???- question "What do you mean with 'to measure how much knowledge is gained'?"
 
-    Here is [part of an evaluation](https://github.com/UPPMAX/bianca_workshops/blob/main/reflections/20240925/20240925_richel.md):
+    Here is [part of an evaluation](https://uppmax.github.io/bianca_workshops/evaluations/20240925/):
 
     ![Part of an evaluation](img/confidences_per_question_zoom.png)
 

diff --git a/docs/lesson_plans/20241111/20241111_richel.md b/docs/lesson_plans/20241111/20241111_richel.md
@@ -64,7 +64,7 @@ Resulting in:
 - Know how to set up jobs efficiently
 
 Looking at the course material, including a
-[PDF](https://github.com/UPPMAX/bianca_workshops/blob/main/docs/presentations/Bianca-Slurm-2023-12-Diana.pdf),
+[PDF](https://github.com/UPPMAX/bianca_workshops/blob/main/docs/beginner/presentations/Bianca-Slurm-2023-12-Diana.pdf),
 I infer more learning objectives:
 
 - Schedule dependent jobs

diff --git a/docs/lesson_plans/README.md b/docs/lesson_plans/README.md
@@ -4,9 +4,9 @@ TODO: split per course
 
 Iteration |Evaluation results
 ----------|-----------------------------
-?1        |[20230911](20230911/README.md)
-?2        |[20231211](20231211/README.md)
-?3        |[20240419](20240419/README.md)
-?4        |[20240419](20240524/README.md)
-?5        |[20240925](20240925/README.md)
-?6        |[20240925](20241111/README.md)
+?1        |[20230911 by Richel](20230911/20230911_richel.md)
+?2        |[20231211 by Richel](20231211/20231211_richel.md)
+?3        |[20240419 by Richel](20240419/20240419_richel.md)
+?4        |[20240524 by Richel](20240419/20240419_richel.md)
+?5        |[20240925 by Richel](20240419/20240419_richel.md)
+?6        |[20241111 by Richel](20241111/20241111_richel.md)
diff --git a/docs/reflections/README.md b/docs/reflections/README.md
@@ -4,9 +4,9 @@ TODO: split per course
 
 Iteration |Evaluation results
 ----------|-----------------------------
-?1        |[20230911](20230911/README.md)
-?2        |[20231211](20231211/README.md)
-?3        |[20240419](20240419/README.md)
-?4        |[20240419](20240524/README.md)
-?5        |[20240925](20240925/README.md)
-?6        |[20240925](20241111/README.md)
+?1        |[20230911 by Richel](20230911/20230911_richel.md)
+?2        |[20231211 by Richel](20231211/20231211_richel.md)
+?3        |[20240419 by Richel](20240419/20240419_richel.md)
+?4        |[20240524 by Richel](20240524/20240524_richel.md)
+?5        |[20240925 by Richel](20240925/20240925_richel.md)
+?6        |[20241111 by Richel](20241111/20241111_richel.md)