Skip to content

Commit

Permalink
Update LotuS2 wrapper to 2.30
Browse files Browse the repository at this point in the history
  • Loading branch information
nsoranzo committed Dec 11, 2023
1 parent 33e0b98 commit 726bde1
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tools/lotus2/lotus2.xml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
<tool id="lotus2" name="LotuS2" version="@VERSION@+galaxy0" profile="20.09">
<description>fast OTU processing pipeline</description>
<macros>
<token name="@VERSION@">2.28.1</token>
<token name="@VERSION@">2.30</token>
<xml name="refDB_macro" token_ref_fasta_formats="fasta,fasta.gz">
<conditional name="refDB_cond">
<param argument="-refDB" type="select" label="Taxonomy reference database">
Expand Down Expand Up @@ -260,7 +260,7 @@ SMPL${i} ${symlink_basename($f.forward.dataset)},${symlink_basename($f.reverse.d
<param argument="-taxAligner" type="select" label="Taxonomy aligner for taxonomic profiling of OTUs">
<option value="0" selected="true">RDPclassifier (max likelihood)</option>
<!-- <option value="1">Blast LCA against custom reference database</option> -->
<option value="2">LAMBDA, LCA against custom reference database</option>
<option value="2">Lambda, LCA against custom reference database</option>
<!-- <option value="4">VSEARCH LCA against custom reference database</option> -->
</param>
<when value="0">
Expand Down

0 comments on commit 726bde1

Please sign in to comment.