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Hpc stack update (Issue 1465) #1596

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merged 80 commits into from
Feb 9, 2023
Merged

Hpc stack update (Issue 1465) #1596

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2a2554f
Update ufs_orion.intel.lua
zach1221 Jan 31, 2023
41a55e8
Merge branch 'ufs-community:develop' into develop
zach1221 Feb 7, 2023
58c1bd8
Update ufs_cheyenne.gnu.lua
zach1221 Feb 7, 2023
58b4fa5
Update ufs_cheyenne.gnu_debug.lua
zach1221 Feb 7, 2023
f5ca289
Update ufs_cheyenne.intel.lua
zach1221 Feb 7, 2023
1ed3589
Update ufs_cheyenne.intel_debug.lua
zach1221 Feb 7, 2023
09aa3a4
Update ufs_gaea.intel
zach1221 Feb 7, 2023
26891f5
Update ufs_gaea.intel_debug
zach1221 Feb 7, 2023
2bcc48a
Update ci.test
jkbk2004 Feb 7, 2023
3a7a9b2
Update ufs_hera.gnu.lua
zach1221 Feb 7, 2023
896ef08
Update cmp_proc_bind.sh
jkbk2004 Feb 7, 2023
0d27781
Update run_test.sh
jkbk2004 Feb 7, 2023
83abda0
Update ufs_hera.gnu_debug.lua
zach1221 Feb 7, 2023
87db639
Update ufs_hera.intel.lua
zach1221 Feb 7, 2023
3836052
Update ufs_hera.intel_debug.lua
zach1221 Feb 7, 2023
872e35f
Update ufs_jet.intel.lua
zach1221 Feb 7, 2023
8e26442
Update ufs_jet.intel_debug.lua
zach1221 Feb 7, 2023
ddff4bd
Update ufs_orion.intel.lua
zach1221 Feb 7, 2023
acee454
Update ufs_orion.intel_debug.lua
zach1221 Feb 7, 2023
e199364
Update bl.py
zach1221 Feb 7, 2023
8d3700a
Update opnReqTest
zach1221 Feb 7, 2023
a48490f
Update cmp_proc_bind.sh
zach1221 Feb 7, 2023
0496996
Update dcp.sh
zach1221 Feb 7, 2023
8230fe2
Update mpi.sh
zach1221 Feb 7, 2023
eaacfd0
Update std.sh
zach1221 Feb 7, 2023
cc976d9
Update thr.sh
zach1221 Feb 7, 2023
534a017
Update wrt_env.sh
zach1221 Feb 7, 2023
ea25126
Update run_test.sh
zach1221 Feb 7, 2023
abda64b
Update opnReqTest
jkbk2004 Feb 7, 2023
4b0376d
Update wrt_env.sh
zach1221 Feb 7, 2023
8170cd1
Update std.sh
jkbk2004 Feb 8, 2023
5167f89
Update thr.sh
jkbk2004 Feb 8, 2023
062f5f8
Update dcp.sh
jkbk2004 Feb 8, 2023
4cdda92
Update run_test.sh
jkbk2004 Feb 8, 2023
a043f23
add cheyenne intel.gnu RT logs: passed
jkbk2004 Feb 8, 2023
2707efd
Update ci.test
jkbk2004 Feb 8, 2023
094700b
Update cmp_proc_bind.sh
jkbk2004 Feb 8, 2023
e1acb16
Update dcp.sh
jkbk2004 Feb 8, 2023
b8e12d3
Update mpi.sh
jkbk2004 Feb 8, 2023
3016477
Update rst.sh
jkbk2004 Feb 8, 2023
898713c
Update std.sh
jkbk2004 Feb 8, 2023
d486284
Update thr.sh
jkbk2004 Feb 8, 2023
524b063
Update run_test.sh
jkbk2004 Feb 8, 2023
4006a42
Update opnReqTest
jkbk2004 Feb 8, 2023
84152ad
Update Jenkinsfile
jkbk2004 Feb 8, 2023
3b0c6c3
Update ufs_orion.intel.lua
jkbk2004 Feb 8, 2023
9cb6e83
Merge branch 'HPC-Stack-Update' into debug/regional
zach1221 Feb 8, 2023
ca97863
Merge pull request #3 from jkbk2004/debug/regional
zach1221 Feb 8, 2023
090dda0
add orion.intel RT logs: passed
Feb 8, 2023
aa07930
add jet.intel RT logs: passed
zach1221 Feb 8, 2023
2ea4f96
updated ort scripts
jkbk2004 Feb 8, 2023
5d14ecd
updated opnReqTest
jkbk2004 Feb 8, 2023
68fec39
Update opnReqTest
jkbk2004 Feb 8, 2023
ad2bbaa
Update run_test.sh
jkbk2004 Feb 8, 2023
7020079
add permission rt_test.sh
jkbk2004 Feb 8, 2023
b17bdeb
Update opnReqTest
jkbk2004 Feb 9, 2023
e3f887e
Update run_test.sh
jkbk2004 Feb 9, 2023
7eaa008
Update std.sh
jkbk2004 Feb 9, 2023
9e00948
Update wrt_env.sh
jkbk2004 Feb 9, 2023
0784a56
Update thr.sh
jkbk2004 Feb 9, 2023
cbe3537
Update opnReqTest
jkbk2004 Feb 9, 2023
716b228
Update opnReqTest
jkbk2004 Feb 9, 2023
38bc769
Update thr.sh
jkbk2004 Feb 9, 2023
af86884
Update thr.sh
jkbk2004 Feb 9, 2023
d7462c1
Update std.sh
jkbk2004 Feb 9, 2023
d8136b0
Update thr.sh
jkbk2004 Feb 9, 2023
2bda72c
Update ufs_gaea.intel
zach1221 Feb 9, 2023
d096257
Update ufs_gaea.intel_debug
zach1221 Feb 9, 2023
623e802
add hera intel.gnu RT logs: passed
jkbk2004 Feb 9, 2023
1421d9a
Update ufs_hera.gnu_debug.lua
zach1221 Feb 9, 2023
d6dba60
Update ufs_cheyenne.gnu_debug.lua
zach1221 Feb 9, 2023
6b560da
Update ufs_cheyenne.intel_debug.lua
zach1221 Feb 9, 2023
a026038
Update ufs_hera.intel_debug.lua
zach1221 Feb 9, 2023
fd00dac
Update ufs_jet.intel_debug.lua
zach1221 Feb 9, 2023
3e84274
Update ufs_orion.intel_debug.lua
zach1221 Feb 9, 2023
e9040df
Update dcp.sh
zach1221 Feb 9, 2023
9e5cd0c
Update mpi.sh
zach1221 Feb 9, 2023
fa0caa0
Update rst.sh
zach1221 Feb 9, 2023
694a8bd
Update thr.sh
zach1221 Feb 9, 2023
42e5139
Update run_test.sh
zach1221 Feb 9, 2023
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6 changes: 3 additions & 3 deletions modulefiles/ufs_cheyenne.gnu.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -14,23 +14,23 @@ load(pathJoin("ncarenv", ncarenv_ver))
gnu_ver=os.getenv("gnu_ver") or "10.1.0"
load(pathJoin("gnu", gnu_ver))

mpt_ver=os.getenv("mpt_ver") or "2.22"
mpt_ver=os.getenv("mpt_ver") or "2.25"
load(pathJoin("mpt", mpt_ver))

ncarcompilers_ver=os.getenv("ncarcompilers_ver") or "0.5.0"
load(pathJoin("ncarcompilers", ncarcompilers_ver))

unload("netcdf")

prepend_path("MODULEPATH", "/glade/work/epicufsrt/GMTB/tools/gnu/10.1.0/hpc-stack-v1.2.0/modulefiles/stack")
prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/gnu10.1.0/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))

hpc_gnu_ver=os.getenv("hpc_gnu_ver") or "10.1.0"
load(pathJoin("hpc-gnu", hpc_gnu_ver))

hpc_mpt_ver=os.getenv("hpc_mpt_ver") or "2.22"
hpc_mpt_ver=os.getenv("hpc_mpt_ver") or "2.25"
load(pathJoin("hpc-mpt", hpc_mpt_ver))

load("ufs_common")
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6 changes: 3 additions & 3 deletions modulefiles/ufs_cheyenne.gnu_debug.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -14,23 +14,23 @@ load(pathJoin("ncarenv", ncarenv_ver))
gnu_ver=os.getenv("gnu_ver") or "10.1.0"
load(pathJoin("gnu", gnu_ver))

mpt_ver=os.getenv("mpt_ver") or "2.22"
mpt_ver=os.getenv("mpt_ver") or "2.25"
load(pathJoin("mpt", mpt_ver))

ncarcompilers_ver=os.getenv("ncarcompilers_ver") or "0.5.0"
load(pathJoin("ncarcompilers", ncarcompilers_ver))

unload("netcdf")

prepend_path("MODULEPATH", "/glade/work/epicufsrt/GMTB/tools/gnu/10.1.0/hpc-stack-v1.2.0/modulefiles/stack")
prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/gnu10.1.0/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))

hpc_gnu_ver=os.getenv("hpc_gnu_ver") or "10.1.0"
load(pathJoin("hpc-gnu", hpc_gnu_ver))

hpc_mpt_ver=os.getenv("hpc_mpt_ver") or "2.22"
hpc_mpt_ver=os.getenv("hpc_mpt_ver") or "2.25"
load(pathJoin("hpc-mpt", hpc_mpt_ver))

load("ufs_common_debug")
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4 changes: 2 additions & 2 deletions modulefiles/ufs_cheyenne.intel.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ load(pathJoin("ncarcompilers", ncarcompilers_ver))

unload("netcdf")

prepend_path("MODULEPATH", "/glade/work/epicufsrt/GMTB/tools/intel/2022.1/hpc-stack-v1.2.0_6eb6/modulefiles/stack")
prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/intel2022.1/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
Expand All @@ -41,4 +41,4 @@ setenv("CXX", "mpicxx")
setenv("FC", "mpif90")
setenv("CMAKE_Platform", "cheyenne.intel")

whatis("Description: UFS build environment")
whatis("Description: UFS build environment")
4 changes: 2 additions & 2 deletions modulefiles/ufs_cheyenne.intel_debug.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ load(pathJoin("ncarcompilers", ncarcompilers_ver))

unload("netcdf")

prepend_path("MODULEPATH", "/glade/work/epicufsrt/GMTB/tools/intel/2022.1/hpc-stack-v1.2.0_6eb6/modulefiles/stack")
prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/intel2022.1/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
Expand All @@ -41,4 +41,4 @@ setenv("CXX", "mpicxx")
setenv("FC", "mpif90")
setenv("CMAKE_Platform", "cheyenne.intel")

whatis("Description: UFS build environment")
whatis("Description: UFS build environment")
4 changes: 2 additions & 2 deletions modulefiles/ufs_hera.gnu.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@ help([[
loads UFS Model prerequisites for Hera/GNU
]])

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "3.7.3"
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

prepend_path("MODULEPATH", "/contrib/sutils/modulefiles")
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6 changes: 3 additions & 3 deletions modulefiles/ufs_hera.gnu_debug.lua
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Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
help([[
loads UFS Model prerequisites for Hera/GNU Debugging
loads UFS Model prerequisites for Hera/GNU
]])

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "3.7.3"
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

prepend_path("MODULEPATH", "/contrib/sutils/modulefiles")
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4 changes: 2 additions & 2 deletions modulefiles/ufs_hera.intel.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@ help([[
loads UFS Model prerequisites for Hera/Intel
]])

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "3.7.3"
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

prepend_path("MODULEPATH", "/contrib/sutils/modulefiles")
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4 changes: 2 additions & 2 deletions modulefiles/ufs_hera.intel_debug.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@ help([[
loads UFS Model prerequisites for Hera/Intel
]])

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/emc.nemspara/soft/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "3.7.3"
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

prepend_path("MODULEPATH", "/contrib/sutils/modulefiles")
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7 changes: 6 additions & 1 deletion modulefiles/ufs_jet.intel.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,12 @@ load("sutils")
cmake_ver=os.getenv("cmake_ver") or "3.20.1"
load(pathJoin("cmake", cmake_ver))

prepend_path("MODULEPATH", "/lfs4/HFIP/hfv3gfs/nwprod/hpc-stack.epic/libs/intel/2022.1.2/modulefiles/stack")
prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))


prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
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7 changes: 6 additions & 1 deletion modulefiles/ufs_jet.intel_debug.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,12 @@ load("sutils")
cmake_ver=os.getenv("cmake_ver") or "3.20.1"
load(pathJoin("cmake", cmake_ver))

prepend_path("MODULEPATH", "/lfs4/HFIP/hfv3gfs/nwprod/hpc-stack.epic/libs/intel/2022.1.2/modulefiles/stack")
prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))


prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
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7 changes: 4 additions & 3 deletions modulefiles/ufs_orion.intel.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -8,10 +8,11 @@ load("noaatools")
cmake_ver=os.getenv("cmake_ver") or "3.22.1"
load(pathJoin("cmake", cmake_ver))

python_ver=os.getenv("python_ver") or "3.7.5"
load(pathJoin("python", python_ver))
prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

prepend_path("MODULEPATH", "/work/noaa/epic-ps/hpc-stack/libs/intel/2022.1.2/modulefiles/stack")
prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
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8 changes: 4 additions & 4 deletions modulefiles/ufs_orion.intel_debug.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -8,11 +8,11 @@ load("noaatools")
cmake_ver=os.getenv("cmake_ver") or "3.22.1"
load(pathJoin("cmake", cmake_ver))

python_ver=os.getenv("python_ver") or "3.7.5"
load(pathJoin("python", python_ver))
prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/miniconda3/modulefiles")
miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
load(pathJoin("miniconda3", miniconda3_ver))

--prepend_path("MODULEPATH", "/apps/contrib/NCEP/libs/hpc-stack/modulefiles/stack")
prepend_path("MODULEPATH", "/work/noaa/epic-ps/hpc-stack/libs/intel/2022.1.2/modulefiles/stack")
prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")

hpc_ver=os.getenv("hpc_ver") or "1.2.0"
load(pathJoin("hpc", hpc_ver))
Expand Down
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