bio-dna.md

• DNA
  • Chromosomes
  • Sequence Analysis
• PAPERS

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DNA

• Mitochondrial DNA :: http://en.wikipedia.org/wiki/Mitochondrial_DNA
• Palaeo-Eskimo, an ancient-human :: http://en.wikipedia.org/wiki/Palaeo-Eskimo
• Nuclear DNA :: http://en.wikipedia.org/wiki/Nuclear_DNA
• Denisova hominin's mtDNA :: http://en.wikipedia.org/wiki/Denisova_hominin
• http://en.wikipedia.org/wiki/MtDNA
• Ancient DNA :: http://en.wikipedia.org/wiki/Ancient_DNA
• Alternative splicing :: http://en.wikipedia.org/wiki/Alternative_splicing
• Single gene disorder :: http://en.wikipedia.org/wiki/Genetic_disorder#Single_gene_disorder
• Significance analysis of microarrays: http://en.wikipedia.org/wiki/Significance_analysis_of_microarrays
• Gene Ontology: http://en.wikipedia.org/wiki/Gene_Ontology
• Contig :: http://en.wikipedia.org/wiki/Contig
• ORF :: http://en.wikipedia.org/wiki/Open_reading_frames
• Gene expression profiling, http://en.wikipedia.org/wiki/Gene_expression_profiling
• DNA (Deoxyribonucleic acid)
• DNA mutations and changes, http://www.genetichealth.com/g101_changes_in_dna.shtml

• Variomes
• http://en.wikipedia.org/wiki/Deoxyribonucleotide
• A hidden code in our DNA explains how new pieces of genes are made.

DNA replication

• Genetic code
• http://en.wikipedia.org/wiki/Prokaryotic_DNA_replication
• http://en.wikipedia.org/wiki/Origin_of_replication
• DNA polymerase
• http://en.wikipedia.org/wiki/DNA_polymerase_III_holoenzyme
• http://en.wikipedia.org/wiki/Divalent
• https://en.wikipedia.org/wiki/DNA_codon_table
• Start codon :: The first codon of a messenger RNA (mRNA) transcript translated by a ribosome.
• 5' prime untranslated region

Chromosomes

• The U.S. National Library of Medicine's Genetics Home Reference on Chromosomes

Sequence Analysis

• Guide to SEQ analysis

• http://en.wikipedia.org/wiki/Medical_genetics
• http://en.wikipedia.org/wiki/Molecular_genetics#Techniques_in_molecular_genetics
  • Precursor mRNA : http://en.wikipedia.org/wiki/Precursor_mRNA
• Whole genome sequencing : http://en.wikipedia.org/wiki/Whole_genome_sequencing
• 5′-end and a 3′-end
• http://en.wikipedia.org/wiki/Upstream_and_downstream_%28DNA%29
• http://en.wikipedia.org/wiki/RNA_polymerase

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PAPERS

• Screening the human exome: a comparison of whole genome and whole transcriptome sequencing, Elizabeth T Cirulli, Abanish Singh, Kevin V Shianna, Dongliang Ge, Jason P Smith, Jessica M Maia, Erin L Heinzen, James J Goedert, David B Goldstein for the Center for HIV/AIDS Vaccine Immunology (CHAVI).
• Sequence complexity and DNA curvature by Gabrielian, A.E. & Bolshoy, A. in Comput Chem. 23, 263-274 (1999).

• The demoiselle of X-inactivation: 50 years old and as trendy and mesmerising as ever, Morey C, Avner P. (2011). PLoS Genet 7(7):e1002212.
• A comparative encyclopedia of DNA elements in the mouse genome
• Principles of regulatory information conservation between mouse and human

• Proteins for technical applications
• PAPER: Genomic imprinting: recognition and marking of imprinted loci, Abramowitz LK, Bartolomei MS. (2012). Curr Opin Genet Dev 22(2):72-8.
• [tag:ToDo] PAPER? Man’s Genome From 45,000 Years Ago Is Reconstructed
  • Toe Fossil Provides Complete Neanderthal Genome
• From One Genome, Many Types of Cells. But How? by Wade N., on 23Feb2009 in the New York Times.
• http://genome.cshlp.org/content/13/1/1.full
• VIDEO : Genetics, Epigenetics and Disease by Professor Adrian Bird, CBE FMedSci FRS, on Tuesday 22 January 2013, Royal Society GlaxoSmithKline Prize Lecture.
• Transcriptome Analysis and Screening for Potential Target Genes for RNAi-Mediated Pest Control of the Beet Armyworm, Spodoptera exigua, Hang Li, Weihua Jiang, Zan Zhang, Yanru Xing, Fei Li, Published: June 18, 2013; DOI: 10.1371/journal.pone.0065931
• http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3426205/
• http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=ProgSelectionGuide