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kousukousu
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Use unix line-endings everywhere.
This means modifying participants.tsv and sub-balgrist*, which must have been edited using Windows computers.
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+3177
-3177
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‎participants.tsv

+267-267
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‎sub-balgrist01/anat/sub-balgrist01_T1w.json

+66-66
Original file line numberDiff line numberDiff line change
@@ -1,66 +1,66 @@
1-
{
2-
"Modality": "MR",
3-
"MagneticFieldStrength": 3,
4-
"Manufacturer": "Siemens",
5-
"ManufacturersModelName": "Prisma",
6-
"InstitutionName": "SCMI_Balgrist_Campus",
7-
"InstitutionalDepartmentName": "SCMI",
8-
"InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008",
9-
"DeviceSerialNumber": "166093",
10-
"StationName": "Prisma",
11-
"BodyPartExamined": "CSPINE",
12-
"PatientPosition": "HFS",
13-
"ProcedureStepDescription": "Maryam_SC_CONS_SPINE",
14-
"SoftwareVersions": "syngo_MR_E11",
15-
"MRAcquisitionType": "3D",
16-
"SeriesDescription": "T1w",
17-
"ProtocolName": "T1w",
18-
"ScanningSequence": "GR_IR",
19-
"SequenceVariant": "SK_SP_MP",
20-
"ScanOptions": "IR",
21-
"SequenceName": "_tfl3d1_16",
22-
"ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"],
23-
"SeriesNumber": 2,
24-
"AcquisitionTime": "15:30:8.700000",
25-
"AcquisitionNumber": 1,
26-
"SliceThickness": 1,
27-
"SAR": 0.0648959,
28-
"EchoTime": 0.00372,
29-
"RepetitionTime": 2,
30-
"InversionTime": 1,
31-
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32-
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28 ],
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"TxRefAmp": 256.372,
44-
"PhaseResolution": 1,
45-
"ReceiveCoilName": "HeadNeck_64",
46-
"ReceiveCoilActiveElements": "HC1-7;NC1,2",
47-
"PulseSequenceDetails": "%SiemensSeq%_tfl",
48-
"ConsistencyInfo": "N4_VE11C_LATEST_20160120",
49-
"PercentPhaseFOV": 81.25,
50-
"PhaseEncodingSteps": 259,
51-
"AcquisitionMatrixPE": 260,
52-
"ReconMatrixPE": 320,
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"ParallelReductionFactorInPlane": 2,
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"PixelBandwidth": 150,
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"DwellTime": 1.04e-05,
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"InPlanePhaseEncodingDirectionDICOM": "ROW",
64-
"ConversionSoftware": "dcm2niix",
65-
"ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900"
66-
}
1+
{
2+
"Modality": "MR",
3+
"MagneticFieldStrength": 3,
4+
"Manufacturer": "Siemens",
5+
"ManufacturersModelName": "Prisma",
6+
"InstitutionName": "SCMI_Balgrist_Campus",
7+
"InstitutionalDepartmentName": "SCMI",
8+
"InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008",
9+
"DeviceSerialNumber": "166093",
10+
"StationName": "Prisma",
11+
"BodyPartExamined": "CSPINE",
12+
"PatientPosition": "HFS",
13+
"ProcedureStepDescription": "Maryam_SC_CONS_SPINE",
14+
"SoftwareVersions": "syngo_MR_E11",
15+
"MRAcquisitionType": "3D",
16+
"SeriesDescription": "T1w",
17+
"ProtocolName": "T1w",
18+
"ScanningSequence": "GR_IR",
19+
"SequenceVariant": "SK_SP_MP",
20+
"ScanOptions": "IR",
21+
"SequenceName": "_tfl3d1_16",
22+
"ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS3D", "DIS2D"],
23+
"SeriesNumber": 2,
24+
"AcquisitionTime": "15:30:8.700000",
25+
"AcquisitionNumber": 1,
26+
"SliceThickness": 1,
27+
"SAR": 0.0648959,
28+
"EchoTime": 0.00372,
29+
"RepetitionTime": 2,
30+
"InversionTime": 1,
31+
"FlipAngle": 9,
32+
"PartialFourier": 1,
33+
"BaseResolution": 320,
34+
"ShimSetting": [
35+
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28 ],
43+
"TxRefAmp": 256.372,
44+
"PhaseResolution": 1,
45+
"ReceiveCoilName": "HeadNeck_64",
46+
"ReceiveCoilActiveElements": "HC1-7;NC1,2",
47+
"PulseSequenceDetails": "%SiemensSeq%_tfl",
48+
"ConsistencyInfo": "N4_VE11C_LATEST_20160120",
49+
"PercentPhaseFOV": 81.25,
50+
"PhaseEncodingSteps": 259,
51+
"AcquisitionMatrixPE": 260,
52+
"ReconMatrixPE": 320,
53+
"ParallelReductionFactorInPlane": 2,
54+
"PixelBandwidth": 150,
55+
"DwellTime": 1.04e-05,
56+
"ImageOrientationPatientDICOM": [
57+
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58+
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59+
0,
60+
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61+
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62+
-0.998342 ],
63+
"InPlanePhaseEncodingDirectionDICOM": "ROW",
64+
"ConversionSoftware": "dcm2niix",
65+
"ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900"
66+
}

‎sub-balgrist01/anat/sub-balgrist01_T2star.json

+68-68
Original file line numberDiff line numberDiff line change
@@ -1,68 +1,68 @@
1-
{
2-
"Modality": "MR",
3-
"MagneticFieldStrength": 3,
4-
"Manufacturer": "Siemens",
5-
"ManufacturersModelName": "Prisma",
6-
"InstitutionName": "SCMI_Balgrist_Campus",
7-
"InstitutionalDepartmentName": "SCMI",
8-
"InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008",
9-
"DeviceSerialNumber": "166093",
10-
"StationName": "Prisma",
11-
"BodyPartExamined": "CSPINE",
12-
"PatientPosition": "HFS",
13-
"ProcedureStepDescription": "Maryam_SC_CONS_SPINE",
14-
"SoftwareVersions": "syngo_MR_E11",
15-
"MRAcquisitionType": "2D",
16-
"SeriesDescription": "GRE-ME",
17-
"ProtocolName": "GRE-ME",
18-
"ScanningSequence": "GR",
19-
"SequenceVariant": "SP",
20-
"ScanOptions": "SAT1",
21-
"SequenceName": "_me2d1r3",
22-
"ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"],
23-
"SeriesNumber": 9,
24-
"AcquisitionTime": "15:59:17.002500",
25-
"AcquisitionNumber": 1,
26-
"SliceThickness": 5,
27-
"SpacingBetweenSlices": 5,
28-
"SAR": 0.218877,
29-
"EchoTime": 0.014,
30-
"RepetitionTime": 0.6,
31-
"FlipAngle": 30,
32-
"PartialFourier": 1,
33-
"BaseResolution": 448,
34-
"ShimSetting": [
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38-
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41-
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42-
167 ],
43-
"TxRefAmp": 261.333,
44-
"PhaseResolution": 1,
45-
"ReceiveCoilName": "HeadNeck_64",
46-
"ReceiveCoilActiveElements": "HC7;NC1,2",
47-
"PulseSequenceDetails": "%SiemensSeq%_medic",
48-
"ConsistencyInfo": "N4_VE11C_LATEST_20160120",
49-
"PercentPhaseFOV": 100,
50-
"EchoTrainLength": 3,
51-
"PhaseEncodingSteps": 447,
52-
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53-
"ReconMatrixPE": 448,
54-
"ParallelReductionFactorInPlane": 2,
55-
"PixelBandwidth": 260,
56-
"DwellTime": 4.3e-06,
57-
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58-
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65-
"InPlanePhaseEncodingDirectionDICOM": "COL",
66-
"ConversionSoftware": "dcm2niix",
67-
"ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900"
68-
}
1+
{
2+
"Modality": "MR",
3+
"MagneticFieldStrength": 3,
4+
"Manufacturer": "Siemens",
5+
"ManufacturersModelName": "Prisma",
6+
"InstitutionName": "SCMI_Balgrist_Campus",
7+
"InstitutionalDepartmentName": "SCMI",
8+
"InstitutionAddress": "Lengghalde_5_Zuerich_ZH_CH_8008",
9+
"DeviceSerialNumber": "166093",
10+
"StationName": "Prisma",
11+
"BodyPartExamined": "CSPINE",
12+
"PatientPosition": "HFS",
13+
"ProcedureStepDescription": "Maryam_SC_CONS_SPINE",
14+
"SoftwareVersions": "syngo_MR_E11",
15+
"MRAcquisitionType": "2D",
16+
"SeriesDescription": "GRE-ME",
17+
"ProtocolName": "GRE-ME",
18+
"ScanningSequence": "GR",
19+
"SequenceVariant": "SP",
20+
"ScanOptions": "SAT1",
21+
"SequenceName": "_me2d1r3",
22+
"ImageType": ["ORIGINAL", "PRIMARY", "M", "NORM", "DIS2D"],
23+
"SeriesNumber": 9,
24+
"AcquisitionTime": "15:59:17.002500",
25+
"AcquisitionNumber": 1,
26+
"SliceThickness": 5,
27+
"SpacingBetweenSlices": 5,
28+
"SAR": 0.218877,
29+
"EchoTime": 0.014,
30+
"RepetitionTime": 0.6,
31+
"FlipAngle": 30,
32+
"PartialFourier": 1,
33+
"BaseResolution": 448,
34+
"ShimSetting": [
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36+
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37+
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38+
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39+
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40+
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41+
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42+
167 ],
43+
"TxRefAmp": 261.333,
44+
"PhaseResolution": 1,
45+
"ReceiveCoilName": "HeadNeck_64",
46+
"ReceiveCoilActiveElements": "HC7;NC1,2",
47+
"PulseSequenceDetails": "%SiemensSeq%_medic",
48+
"ConsistencyInfo": "N4_VE11C_LATEST_20160120",
49+
"PercentPhaseFOV": 100,
50+
"EchoTrainLength": 3,
51+
"PhaseEncodingSteps": 447,
52+
"AcquisitionMatrixPE": 448,
53+
"ReconMatrixPE": 448,
54+
"ParallelReductionFactorInPlane": 2,
55+
"PixelBandwidth": 260,
56+
"DwellTime": 4.3e-06,
57+
"PhaseEncodingDirection": "j-",
58+
"ImageOrientationPatientDICOM": [
59+
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60+
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61+
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62+
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63+
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65+
"InPlanePhaseEncodingDirectionDICOM": "COL",
66+
"ConversionSoftware": "dcm2niix",
67+
"ConversionSoftwareVersion": "v1.0.20180622 (JP2:OpenJPEG) (JP-LS:CharLS) MSC1900"
68+
}

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