params.json

{
  "name": "Medicalimaging",
  "tagline": "Medical Imaging course project: http://sourabhd.github.io/medicalimaging/",
  "body": "Implementation of Chan-Vese like segmentation algorithm for 3D medical images\r\n=============================================================================\r\n\r\nAuthors:\r\n-------\r\n* Ahsanul Karim <karim.ahsanul@gmail.com>\r\n* Sourabh Daptardar <saurabh.daptardar@gmail.com>\r\n\r\nLicense:\r\n-------\r\nBSD\r\n\r\n\r\nAbout the code:\r\n--------------\r\nThis software implements Chan-Vese like segmentation algorithm based upon level\r\nsets. Major differences are : 1. It uses 'gaussian' curvature, instead of mean\r\ncurvature 2. Targeted for 3D objects rather than 2D images.\r\n\r\nThis code was created for course project in medical imaging course \r\nby Prof. Allen Tanenbaum at Stony Brook University.\r\nhttps://www.cs.stonybrook.edu/people/faculty/AllenTannenbaum\r\n\r\nRequires:\r\n--------\r\nMATLAB\r\n\r\nSteps to run\r\n------------\r\nOn Matlab prompt:\r\ncd src/\r\nmain\r\n\r\nmain.m contains demos to run the Slicer3D sample data files as well as\r\nsynthetic 3D dataset like 3D blobs, 3D solid sphere.\r\n\r\n\r\nSample data\r\n-----------\r\nSlicer3D sample data (MR images)  is placed in the data/ directory\r\nThis data was obtained from Slicer 3D app :  http://www.slicer.org/\r\nRefer to the website for terms of usage.\r\n\r\nDemos\r\n-----\r\n* Blob: https://www.youtube.com/watch?v=lxOBL_5ZKCA\r\n* MR Head: https://www.youtube.com/watch?v=tsz1UCLJ4qw\r\n\r\nAlso shipped along with the following third party codes which the software uses:\r\n-------------------------------------------------------------------------------\r\n1. nrrdread.m : Read NRRD images into matlab\r\nhttp://www.mathworks.com/matlabcentral/fileexchange/34653-nrrd-format-file-reader/content/nrrdread.m \r\nBSD license\r\n\r\n2. vol3d.m : Render 3D graphics in matlab\r\nhttp://www.mathworks.com/matlabcentral/fileexchange/22940-vol3d-v2\r\nBSD license\r\n\r\nReferences:\r\n----------\r\n1. Active Contours Without Edges, IEEE TRANSACTIONS ON IMAGE PROCESSING, VOL. 10, NO. 2, FEBRUARY 2001\r\n   Tony F. Chan, and Luminita A. Vese\r\n   http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=902291\r\n\r\n2. Summer Research School on Medical Imaging, 2012, The Fields Institute for Research in Mathematical Sciences.\r\n   Todd Wittman\r\nhttp://www.math.ucla.edu/~wittman/Fields/\r\n\r\n3. For general overview on level set methods\r\nhttp://www.museth.org/Ken/Publications_files/Breen-etal_SIG04.pdf\r\n",
  "note": "Don't delete this file! It's used internally to help with page regeneration."
}