diff --git a/environment.yml b/environment.yml new file mode 100644 index 0000000..64fb17a --- /dev/null +++ b/environment.yml @@ -0,0 +1,173 @@ +name: covid19 +channels: + - conda-forge + - defaults +dependencies: + - _libgcc_mutex=0.1=main + - asn1crypto=1.3.0=py37_0 + - attrs=19.3.0=py_0 + - autopep8=1.4.4=py_0 + - backcall=0.1.0=py37_0 + - beautifulsoup4=4.8.2=py37_0 + - blas=1.0=mkl + - bleach=3.1.0=py37_0 + - bzip2=1.0.8=h7b6447c_0 + - ca-certificates=2020.1.1=0 + - cairo=1.14.12=h8948797_3 + - certifi=2019.11.28=py37_0 + - cffi=1.14.0=py37h2e261b9_0 + - chardet=3.0.4=py37_1003 + - click=7.0=py37_0 + - click-plugins=1.1.1=py_0 + - cligj=0.5.0=py37_0 + - cryptography=2.8=py37h1ba5d50_0 + - curl=7.67.0=hbc83047_0 + - cycler=0.10.0=py37_0 + - dbus=1.13.12=h746ee38_0 + - decorator=4.4.2=py_0 + - defusedxml=0.6.0=py_0 + - descartes=1.1.0=py_3 + - entrypoints=0.3=py37_0 + - expat=2.2.6=he6710b0_0 + - fiona=1.8.4=py37hc38cc03_0 + - fontconfig=2.13.0=h9420a91_0 + - freetype=2.9.1=h8a8886c_1 + - freexl=1.0.5=h14c3975_0 + - gdal=2.3.3=py37hbb2a789_0 + - geopandas=0.6.1=py_0 + - geos=3.7.1=he6710b0_0 + - giflib=5.1.4=h14c3975_1 + - glib=2.63.1=h5a9c865_0 + - gmp=6.1.2=h6c8ec71_1 + - gst-plugins-base=1.14.0=hbbd80ab_1 + - gstreamer=1.14.0=hb453b48_1 + - hdf4=4.2.13=h3ca952b_2 + - hdf5=1.10.4=hb1b8bf9_0 + - icu=58.2=h9c2bf20_1 + - idna=2.8=py37_0 + - importlib_metadata=1.5.0=py37_0 + - intel-openmp=2020.0=166 + - ipykernel=5.1.4=py37h39e3cac_0 + - ipython=7.13.0=py37h5ca1d4c_0 + - ipython_genutils=0.2.0=py37_0 + - ipywidgets=7.5.1=py_0 + - jedi=0.16.0=py37_0 + - jinja2=2.11.1=py_0 + - jpeg=9b=h024ee3a_2 + - json-c=0.13.1=h1bed415_0 + - jsonschema=3.2.0=py37_0 + - jupyter=1.0.0=py37_7 + - jupyter_client=5.3.4=py37_0 + - jupyter_console=6.1.0=py_0 + - jupyter_contrib_core=0.3.3=py_2 + - jupyter_contrib_nbextensions=0.5.1=py37_0 + - jupyter_core=4.6.1=py37_0 + - jupyter_highlight_selected_word=0.2.0=py37_1000 + - jupyter_latex_envs=1.4.4=py37_1000 + - jupyter_nbextensions_configurator=0.4.1=py37_0 + - kealib=1.4.7=hd0c454d_6 + - kiwisolver=1.1.0=py37he6710b0_0 + - krb5=1.16.4=h173b8e3_0 + - ld_impl_linux-64=2.33.1=h53a641e_7 + - libboost=1.67.0=h46d08c1_4 + - libcurl=7.67.0=h20c2e04_0 + - libdap4=3.19.1=h6ec2957_0 + - libedit=3.1.20181209=hc058e9b_0 + - libffi=3.2.1=hd88cf55_4 + - libgcc-ng=9.1.0=hdf63c60_0 + - libgdal=2.3.3=h2e7e64b_0 + - libgfortran-ng=7.3.0=hdf63c60_0 + - libkml=1.3.0=h590aaf7_4 + - libnetcdf=4.6.1=h11d0813_2 + - libpng=1.6.37=hbc83047_0 + - libpq=11.2=h20c2e04_0 + - libsodium=1.0.16=h1bed415_0 + - libspatialindex=1.9.3=he6710b0_0 + - libspatialite=4.3.0a=hb08deb6_19 + - libssh2=1.9.0=h1ba5d50_1 + - libstdcxx-ng=9.1.0=hdf63c60_0 + - libtiff=4.1.0=h2733197_0 + - libuuid=1.0.3=h1bed415_2 + - libxcb=1.13=h1bed415_1 + - libxml2=2.9.9=hea5a465_1 + - libxslt=1.1.33=h7d1a2b0_0 + - lxml=4.5.0=py37hefd8a0e_0 + - markupsafe=1.1.1=py37h7b6447c_0 + - matplotlib=3.1.3=py37_0 + - matplotlib-base=3.1.3=py37hef1b27d_0 + - mistune=0.8.4=py37h7b6447c_0 + - mkl=2020.0=166 + - mkl-service=2.3.0=py37he904b0f_0 + - mkl_fft=1.0.15=py37ha843d7b_0 + - mkl_random=1.1.0=py37hd6b4f25_0 + - munch=2.5.0=py_0 + - nbconvert=5.6.1=py37_0 + - nbformat=5.0.4=py_0 + - ncurses=6.2=he6710b0_0 + - notebook=6.0.3=py37_0 + - numpy=1.18.1=py37h4f9e942_0 + - numpy-base=1.18.1=py37hde5b4d6_1 + - openjpeg=2.3.0=h05c96fa_1 + - openssl=1.1.1d=h7b6447c_4 + - pandas=1.0.1=py37h0573a6f_0 + - pandoc=2.2.3.2=0 + - pandocfilters=1.4.2=py37_1 + - parso=0.6.1=py_0 + - pcre=8.43=he6710b0_0 + - pexpect=4.8.0=py37_0 + - pickleshare=0.7.5=py37_0 + - pip=20.0.2=py37_1 + - pixman=0.38.0=h7b6447c_0 + - poppler=0.65.0=h581218d_1 + - poppler-data=0.4.9=0 + - proj4=5.2.0=he6710b0_1 + - prometheus_client=0.7.1=py_0 + - prompt_toolkit=3.0.3=py_0 + - ptyprocess=0.6.0=py37_0 + - pycodestyle=2.5.0=py37_0 + - pycparser=2.19=py37_0 + - pygments=2.5.2=py_0 + - pyopenssl=19.1.0=py37_0 + - pyparsing=2.4.6=py_0 + - pyproj=1.9.6=py37h14380d9_0 + - pyqt=5.9.2=py37h05f1152_2 + - pyrsistent=0.15.7=py37h7b6447c_0 + - pysocks=1.7.1=py37_0 + - python=3.7.6=h0371630_2 + - python-dateutil=2.8.1=py_0 + - python_abi=3.7=1_cp37m + - pytz=2019.3=py_0 + - pyyaml=5.3=py37h8f50634_1 + - pyzmq=18.1.1=py37he6710b0_0 + - qt=5.9.7=h5867ecd_1 + - qtconsole=4.7.1=py_0 + - qtpy=1.9.0=py_0 + - readline=7.0=h7b6447c_5 + - requests=2.23.0=py37_0 + - rtree=0.9.3=py37_0 + - send2trash=1.5.0=py37_0 + - setuptools=46.0.0=py37_0 + - shapely=1.6.4=py37h86c5351_0 + - sip=4.19.8=py37hf484d3e_0 + - six=1.14.0=py37_0 + - soupsieve=1.9.5=py37_0 + - sqlite=3.31.1=h7b6447c_0 + - terminado=0.8.3=py37_0 + - testpath=0.4.4=py_0 + - tk=8.6.8=hbc83047_0 + - tornado=6.0.4=py37h7b6447c_1 + - traitlets=4.3.3=py37_0 + - urllib3=1.25.8=py37_0 + - wcwidth=0.1.8=py_0 + - webencodings=0.5.1=py37_1 + - wheel=0.34.2=py37_0 + - widgetsnbextension=3.5.1=py37_0 + - xerces-c=3.2.2=h780794e_0 + - xlrd=1.2.0=py37_0 + - xz=5.2.4=h14c3975_4 + - yaml=0.2.2=h516909a_1 + - zeromq=4.3.1=he6710b0_3 + - zipp=2.2.0=py_0 + - zlib=1.2.11=h7b6447c_3 + - zstd=1.3.7=h0b5b093_0 + diff --git a/requirements.txt b/requirements.txt index 8254265..eccc207 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,170 +1,90 @@ -# This file may be used to create an environment using: -# $ conda create --name --file -# platform: linux-64 -_libgcc_mutex=0.1=main -asn1crypto=1.3.0=py37_0 -attrs=19.3.0=py_0 -autopep8=1.4.4=py_0 -backcall=0.1.0=py37_0 -beautifulsoup4=4.8.2=py37_0 -blas=1.0=mkl -bleach=3.1.0=py37_0 -bzip2=1.0.8=h7b6447c_0 -ca-certificates=2020.1.1=0 -cairo=1.14.12=h8948797_3 -certifi=2019.11.28=py37_0 -cffi=1.14.0=py37h2e261b9_0 -chardet=3.0.4=py37_1003 -click=7.0=py37_0 -click-plugins=1.1.1=py_0 -cligj=0.5.0=py37_0 -cryptography=2.8=py37h1ba5d50_0 -curl=7.67.0=hbc83047_0 -cycler=0.10.0=py37_0 -dbus=1.13.12=h746ee38_0 -decorator=4.4.2=py_0 -defusedxml=0.6.0=py_0 -descartes=1.1.0=py_3 -entrypoints=0.3=py37_0 -expat=2.2.6=he6710b0_0 -fiona=1.8.4=py37hc38cc03_0 -fontconfig=2.13.0=h9420a91_0 -freetype=2.9.1=h8a8886c_1 -freexl=1.0.5=h14c3975_0 -gdal=2.3.3=py37hbb2a789_0 -geopandas=0.6.1=py_0 -geos=3.7.1=he6710b0_0 -giflib=5.1.4=h14c3975_1 -glib=2.63.1=h5a9c865_0 -gmp=6.1.2=h6c8ec71_1 -gst-plugins-base=1.14.0=hbbd80ab_1 -gstreamer=1.14.0=hb453b48_1 -hdf4=4.2.13=h3ca952b_2 -hdf5=1.10.4=hb1b8bf9_0 -icu=58.2=h9c2bf20_1 -idna=2.8=py37_0 -importlib_metadata=1.5.0=py37_0 -intel-openmp=2020.0=166 -ipykernel=5.1.4=py37h39e3cac_0 -ipython=7.13.0=py37h5ca1d4c_0 -ipython_genutils=0.2.0=py37_0 -ipywidgets=7.5.1=py_0 -jedi=0.16.0=py37_0 -jinja2=2.11.1=py_0 -jpeg=9b=h024ee3a_2 -json-c=0.13.1=h1bed415_0 -jsonschema=3.2.0=py37_0 -jupyter=1.0.0=py37_7 -jupyter_client=5.3.4=py37_0 -jupyter_console=6.1.0=py_0 -jupyter_contrib_core=0.3.3=py_2 -jupyter_contrib_nbextensions=0.5.1=py37_0 -jupyter_core=4.6.1=py37_0 -jupyter_highlight_selected_word=0.2.0=py37_1000 -jupyter_latex_envs=1.4.4=py37_1000 -jupyter_nbextensions_configurator=0.4.1=py37_0 -kealib=1.4.7=hd0c454d_6 -kiwisolver=1.1.0=py37he6710b0_0 -krb5=1.16.4=h173b8e3_0 -ld_impl_linux-64=2.33.1=h53a641e_7 -libboost=1.67.0=h46d08c1_4 -libcurl=7.67.0=h20c2e04_0 -libdap4=3.19.1=h6ec2957_0 -libedit=3.1.20181209=hc058e9b_0 -libffi=3.2.1=hd88cf55_4 -libgcc-ng=9.1.0=hdf63c60_0 -libgdal=2.3.3=h2e7e64b_0 -libgfortran-ng=7.3.0=hdf63c60_0 -libkml=1.3.0=h590aaf7_4 -libnetcdf=4.6.1=h11d0813_2 -libpng=1.6.37=hbc83047_0 -libpq=11.2=h20c2e04_0 -libsodium=1.0.16=h1bed415_0 -libspatialindex=1.9.3=he6710b0_0 -libspatialite=4.3.0a=hb08deb6_19 -libssh2=1.9.0=h1ba5d50_1 -libstdcxx-ng=9.1.0=hdf63c60_0 -libtiff=4.1.0=h2733197_0 -libuuid=1.0.3=h1bed415_2 -libxcb=1.13=h1bed415_1 -libxml2=2.9.9=hea5a465_1 -libxslt=1.1.33=h7d1a2b0_0 -lxml=4.5.0=py37hefd8a0e_0 -markupsafe=1.1.1=py37h7b6447c_0 -matplotlib=3.1.3=py37_0 -matplotlib-base=3.1.3=py37hef1b27d_0 -mistune=0.8.4=py37h7b6447c_0 -mkl=2020.0=166 -mkl-service=2.3.0=py37he904b0f_0 -mkl_fft=1.0.15=py37ha843d7b_0 -mkl_random=1.1.0=py37hd6b4f25_0 -munch=2.5.0=py_0 -nbconvert=5.6.1=py37_0 -nbformat=5.0.4=py_0 -ncurses=6.2=he6710b0_0 -notebook=6.0.3=py37_0 -numpy=1.18.1=py37h4f9e942_0 -numpy-base=1.18.1=py37hde5b4d6_1 -openjpeg=2.3.0=h05c96fa_1 -openssl=1.1.1d=h7b6447c_4 -pandas=1.0.1=py37h0573a6f_0 -pandoc=2.2.3.2=0 -pandocfilters=1.4.2=py37_1 -parso=0.6.1=py_0 -pcre=8.43=he6710b0_0 -pexpect=4.8.0=py37_0 -pickleshare=0.7.5=py37_0 -pip=20.0.2=py37_1 -pixman=0.38.0=h7b6447c_0 -poppler=0.65.0=h581218d_1 -poppler-data=0.4.9=0 -proj4=5.2.0=he6710b0_1 -prometheus_client=0.7.1=py_0 -prompt_toolkit=3.0.3=py_0 -ptyprocess=0.6.0=py37_0 -pycodestyle=2.5.0=py37_0 -pycparser=2.19=py37_0 -pygments=2.5.2=py_0 -pyopenssl=19.1.0=py37_0 -pyparsing=2.4.6=py_0 -pyproj=1.9.6=py37h14380d9_0 -pyqt=5.9.2=py37h05f1152_2 -pyrsistent=0.15.7=py37h7b6447c_0 -pysocks=1.7.1=py37_0 -python=3.7.6=h0371630_2 -python-dateutil=2.8.1=py_0 -python_abi=3.7=1_cp37m -pytz=2019.3=py_0 -pyyaml=5.3=py37h8f50634_1 -pyzmq=18.1.1=py37he6710b0_0 -qt=5.9.7=h5867ecd_1 -qtconsole=4.7.1=py_0 -qtpy=1.9.0=py_0 -readline=7.0=h7b6447c_5 -requests=2.23.0=py37_0 -rtree=0.9.3=py37_0 -send2trash=1.5.0=py37_0 -setuptools=46.0.0=py37_0 -shapely=1.6.4=py37h86c5351_0 -sip=4.19.8=py37hf484d3e_0 -six=1.14.0=py37_0 -soupsieve=1.9.5=py37_0 -sqlite=3.31.1=h7b6447c_0 -terminado=0.8.3=py37_0 -testpath=0.4.4=py_0 -tk=8.6.8=hbc83047_0 -tornado=6.0.4=py37h7b6447c_1 -traitlets=4.3.3=py37_0 -urllib3=1.25.8=py37_0 -wcwidth=0.1.8=py_0 -webencodings=0.5.1=py37_1 -wheel=0.34.2=py37_0 -widgetsnbextension=3.5.1=py37_0 -xerces-c=3.2.2=h780794e_0 -xlrd=1.2.0=py37_0 -xz=5.2.4=h14c3975_4 -yaml=0.2.2=h516909a_1 -zeromq=4.3.1=he6710b0_3 -zipp=2.2.0=py_0 -zlib=1.2.11=h7b6447c_3 -zstd=1.3.7=h0b5b093_0 +asn1crypto==1.3.0 +attrs==19.3.0 +autopep8==1.4.4 +backcall==0.1.0 +beautifulsoup4==4.8.2 +bleach==3.1.0 +certifi==2019.11.28 +cffi==1.14.0 +chardet==3.0.4 +Click==7.0 +click-plugins==1.1.1 +cligj==0.5.0 +cryptography==2.8 +cycler==0.10.0 +decorator==4.4.2 +defusedxml==0.6.0 +descartes==1.1.0 +entrypoints==0.3 +Fiona==1.8.4 +GDAL==2.3.3 +geopandas==0.6.1 +idna==2.8 +importlib-metadata==1.5.0 +ipykernel==5.1.4 +ipython==7.13.0 +ipython-genutils==0.2.0 +ipywidgets==7.5.1 +jedi==0.16.0 +Jinja2==2.11.1 +jsonschema==3.2.0 +jupyter==1.0.0 +jupyter-client==5.3.4 +jupyter-console==6.1.0 +jupyter-contrib-core==0.3.3 +jupyter-contrib-nbextensions==0.5.1 +jupyter-core==4.6.1 +jupyter-highlight-selected-word==0.2.0 +jupyter-latex-envs==1.4.4 +jupyter-nbextensions-configurator==0.4.1 +kiwisolver==1.1.0 +lxml==4.5.0 +MarkupSafe==1.1.1 +matplotlib==3.1.3 +mistune==0.8.4 +mkl-fft==1.0.15 +mkl-random==1.1.0 +mkl-service==2.3.0 +munch==2.5.0 +nbconvert==5.6.1 +nbformat==5.0.4 +notebook==6.0.3 +numpy==1.18.1 +pandas==1.0.1 +pandocfilters==1.4.2 +parso==0.6.1 +pexpect==4.8.0 +pickleshare==0.7.5 +prometheus-client==0.7.1 +prompt-toolkit==3.0.3 +ptyprocess==0.6.0 +pycodestyle==2.5.0 +pycparser==2.19 +Pygments==2.5.2 +pyOpenSSL==19.1.0 +pyparsing==2.4.6 +pyproj==1.9.6 +pyrsistent==0.15.7 +PySocks==1.7.1 +python-dateutil==2.8.1 +pytz==2019.3 +PyYAML==5.3 +pyzmq==18.1.1 +qtconsole==4.7.1 +QtPy==1.9.0 +requests==2.23.0 +Rtree==0.9.3 +Send2Trash==1.5.0 +Shapely==1.6.4.post1 +six==1.14.0 +soupsieve==1.9.5 +terminado==0.8.3 +testpath==0.4.4 +tornado==6.0.4 +traitlets==4.3.3 +urllib3==1.25.8 +wcwidth==0.1.8 +webencodings==0.5.1 +widgetsnbextension==3.5.1 +xlrd==1.2.0 +zipp==2.2.0