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numba version 0.60.0 #135

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Intron7 opened this issue Jun 17, 2024 · 6 comments
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numba version 0.60.0 #135

Intron7 opened this issue Jun 17, 2024 · 6 comments
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@Intron7
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Intron7 commented Jun 17, 2024

decoupler fails to import with numba version 0.60.0

https://github.com/scverse/rapids_singlecell/actions/runs/9552426465/job/26329883508

@Intron7 Intron7 added the bug Something isn't working label Jun 17, 2024
@deeenes
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deeenes commented Jun 17, 2024

See also #134

@Intron7
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Intron7 commented Jun 17, 2024

I only checked issues sorry. But it seems there are some more things broken.

If you want me to help with some of these issue let me know.

@deeenes
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deeenes commented Jun 19, 2024

Thanks @Intron7, Now we merged the PR above, and because numba won't support numpy 2.0 until Sept the earliest, we just had to pin numpy < 2.0. With that, everything should work like before.

@deeenes deeenes closed this as completed Jun 19, 2024
@Zethson
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Zethson commented Jun 19, 2024

@deeenes could we get a release, please?

@deeenes
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deeenes commented Jun 19, 2024

Yes, @PauBadiaM are you doing a release tomorrow? Also, we have an old version in bioconda

@PauBadiaM
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PauBadiaM commented Jun 20, 2024

@Zethson @Intron7 I've released the latest version with the fix: https://pypi.org/project/decoupler/1.7.0/
@deeenes the updated version can be found in conda-forge(this new version still needs to propagate) instead of bioconda

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