Missing data

[YenCheHsiao]

Hi mcollatz,
Thanks for your amazing work.

I want to retrain the model and I followed the readme file to run the repo code. When I downloaded positive and negative samples using utils/download_from_iedb.py, the program would stop running after downloading around 30000 data. So I just first download 100 data and test the next step.

The problem is that when I run the generate_binary_clustered_training_sets.py, I need to change the path in the code. However, I don't know how to get the data in the embeddings_bepipred_samples file at the 83 line and the data in the data_generator_bepipred_binary_0.8_seqID_checked_output file at the 35 line.