This is an automatically generated PR. The following steps are all automatically performed:
- Fetch raw data
- Map raw data to DwC standard and save the output in
./data/processed
- Get an overview of the changes
- Run some tests, e.g. check the uniqueness of
occurrenceID
, check that all occurrences have aeventID
andscientificName
, check thatsamplingProtocol
andindividualCount
are correctly set.
Note to the reviewer: the workflow automation is still in a development phase. Please, check the output thoroughly before merging to main
. In case, improve the data fecthing fetch_data.Rmd
, the mapping dwc_mapping.Rmd
, both in ./src
or the GitHub workflows fetch-data.yaml
and mapping_and_testing.yaml
in ./.github/workflows
.