Skip to content

Commit 90e2948

Browse files
authored
Update README.md
1 parent de32e94 commit 90e2948

File tree

1 file changed

+4
-1
lines changed

1 file changed

+4
-1
lines changed

README.md

+4-1
Original file line numberDiff line numberDiff line change
@@ -1,13 +1,16 @@
1+
# Kinbiont.jl
12

23
Ecological and evolutionary processes of microbes are characterized by observables like growth rates and biomass yield, inferred from kinetics experiments.
34
Across conditions, these observables map response patterns such as antibiotic growth inhibition and yield dependence on substrate.
45
But how do we extract ecological and evolutionary insights from massive datasets of time-resolved microbial data? Here we introduce Kinbiont — an ecosystem of numerical methods combining state-of-the-art solvers for ordinary differential equations, non-linear optimization, signal processing, and interpretable machine learning algorithms.
56
Kinbiont provides a comprehensive, model-based analysis pipeline, covering all aspects of microbial kinetics data, from preprocessing to result interpretation.
67

7-
8+
# Documentation
89

910
For stable documentation please consult [Documentation](https://kinbiont.fuzue.org/).
1011

12+
# Publication
13+
1114
Pre-print at [Biorxiv](https://www.biorxiv.org/content/10.1101/2024.09.09.611847v1) .
1215

1316
Data and scripts to reproduce the paper results at [Kinbiont utilities](https://github.com/pinheiroGroup/Kinbiont_utilities)

0 commit comments

Comments
 (0)