diff --git a/tests/config/test_data.config b/tests/config/test_data.config
index b17f2d796f8..db5bd5d6bc0 100644
--- a/tests/config/test_data.config
+++ b/tests/config/test_data.config
@@ -548,9 +548,6 @@ params {
             }
             'Gae_host' {
                 'genomic_data' {
-                    'pep' {
-                            pep_seq                                = "${tol_test_data_dir}/Gae_host/genomic_data/pep/Gae_host_pep.fa"
-                        }
                     'blast' {
                             blast_tsv                               = "${tol_test_data_dir}/Gae_host/genomic_data/blast/Gae_host.Gae-rna-final_blast.tsv"
                         }
@@ -561,7 +558,6 @@ params {
                     'nxOscSpen2' {
                         'selfcomp' {
                             mummer_bed                             = "${tol_test_data_dir}/Oscheius_sp/genomic_data/nxOscSpen2/selfcomp/nxOscSpen2.bed"
-                            split_fasta                            = "${tol_test_data_dir}/Oscheius_sp/genomic_data/nxOscSpen2/selfcomp/nxOscSpen2_split.fa"
                             split_agp                              = "${tol_test_data_dir}/Oscheius_sp/genomic_data/nxOscSpen2/selfcomp/nxOscSpen2_split.agp"
                             mummer_file                            = "${tol_test_data_dir}/Oscheius_sp/genomic_data/nxOscSpen2/selfcomp/nxOscSpen2.mummer"
                         }