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ngsonto2017_july_innuendo.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://www.semanticweb.org/owl/owlapi/turtle#"
xml:base="http://www.semanticweb.org/owl/owlapi/turtle"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:oboOther="http://purl.obolibrary.org/obo/"
xmlns:ns1="http://edamontology.org/"
xmlns:edamontology="http://edamontology.org#"
xmlns:ns4="http://rdf.ebi.ac.uk/terms/biosd/"
xmlns:efo="http://www.ebi.ac.uk/efo/"
xmlns:ns6="http://rest.phyloviz.net/ontology#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:ns33="http://rdf.ebi.ac.uk/resource/biosamples/sample/"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:ns32="http://rest.phyloviz.net/"
xmlns:ns28="http://www.phyloviz.net/typon/ontology.owl#"
xmlns:ns27="http://www.phyloviz.net/typon/ontology.owl/resources/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:dc="http://purl.org/dc/elements/1.1/">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ngsonto.owl">
<owl:imports rdf:resource="http://ifomis.uni-saarland.de/bfo/owl"/>
<dc:title xml:lang="en">NGSOnto</dc:title>
<dc:creator xml:lang="en">"Mickael Silva"</dc:creator>
<dc:creator xml:lang="en">João Carriço</dc:creator>
<rdfs:comment xml:lang="en">This ontology aims to describe and anotate all pipelines of a NGS process, starting from DNA extraction from an isolate to the assembled draft genome, allowing the reproducibility of the processes. nConstructed from BFO (Basic Formal Ontology), an upper level ontology (http://www.ifomis.org/bfo) and designed based on NCBI Sequence Read Archive (http://www.ncbi.nlm.nih.gov/sra) and EMBL-EBI European Nucleotide Archive (http://www.ebi.ac.uk/ena/) public data.</rdfs:comment>
<dc:format xml:lang="en">OWL</dc:format>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://edamontology.org#comment -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#comment"/>
<!-- http://edamontology.org#created_in -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#created_in"/>
<!-- http://edamontology.org#def -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#def"/>
<!-- http://edamontology.org#editor_note -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#editor_note"/>
<!-- http://edamontology.org#namespace -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#namespace"/>
<!-- http://edamontology.org#obsolete_alt_id -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#obsolete_alt_id"/>
<!-- http://edamontology.org#subset -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#subset"/>
<!-- http://edamontology.org#synonym -->
<owl:AnnotationProperty rdf:about="http://edamontology.org#synonym"/>
<!-- http://edamontology.org/synonym -->
<owl:AnnotationProperty rdf:about="http://edamontology.org/synonym"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111">
<oboOther:IAO_0000111 xml:lang="en">editor preferred label</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">editor preferred label</rdfs:label>
<rdfs:label>editor preferred term</rdfs:label>
<rdfs:label xml:lang="en">editor preferred term</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112">
<oboOther:IAO_0000111 xml:lang="en">example of usage</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">A phrase describing how a class name should be used. May also include other kinds of examples that facilitate immediate understanding of a class semantics, such as widely known prototypical subclasses or instances of the class. Although essential for high level terms, examples for low level terms (e.g., Affymetrix HU133 array) are not</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">example of usage</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114">
<oboOther:IAO_0000111 xml:lang="en">has curation status</oboOther:IAO_0000111>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</oboOther:IAO_0000117>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Bill Bug</oboOther:IAO_0000117>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">OBI_0000281</oboOther:IAO_0000119>
<rdfs:label xml:lang="en">has curation status</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115">
<oboOther:IAO_0000111>definition</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</oboOther:IAO_0000115>
<oboOther:IAO_0000115 xml:lang="en">The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label>definition</rdfs:label>
<rdfs:label xml:lang="en">definition</rdfs:label>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">definition</rdfs:label>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">textual definition</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116">
<oboOther:IAO_0000111 xml:lang="en">editor note</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obfoundry.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">editor note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117">
<oboOther:IAO_0000111 xml:lang="en">term editor</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people</oboOther:IAO_0000115>
<oboOther:IAO_0000116 xml:lang="en">20110707, MC: label update to term editor and definition modified accordingly. See http://code.google.com/p/information-artifact-ontology/issues/detail?id=115.</oboOther:IAO_0000116>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">term editor</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118">
<oboOther:IAO_0000111 xml:lang="en">alternative term</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<oboOther:IAO_0000115 xml:lang="en">An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">alternative term</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119">
<oboOther:IAO_0000111 xml:lang="en">definition source</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</oboOther:IAO_0000117>
<oboOther:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w</oboOther:IAO_0000119>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">definition source</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232">
<oboOther:IAO_0000111 xml:lang="en">curator note</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115 xml:lang="en">An administrative note of use for a curator but of no use for a user</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</oboOther:IAO_0000117>
<rdfs:label xml:lang="en">curator note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412">
<oboOther:IAO_0000111 xml:lang="en">imported from</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<oboOther:IAO_0000115 xml:lang="en">For external terms/classes, the ontology from which the term was imported</oboOther:IAO_0000115>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</oboOther:IAO_0000117>
<oboOther:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</oboOther:IAO_0000117>
<oboOther:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></oboOther:IAO_0000119>
<rdfs:label xml:lang="en">imported from</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_id -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_id"/>
<!-- http://purl.obolibrary.org/obo/IAO_subset -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_subset"/>
<!-- http://purl.obolibrary.org/obo/IAO_xref -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_xref"/>
<!-- http://purl.obolibrary.org/obo/OBI_0001847 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0001847">
<oboOther:IAO_0000111 xml:lang="en">ISA alternative term</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<oboOther:IAO_0000115>An alternative term used by the ISA tools project (http://isa-tools.org).</oboOther:IAO_0000115>
<oboOther:IAO_0000117>Person: Alejandra Gonzalez-Beltran</oboOther:IAO_0000117>
<oboOther:IAO_0000117>Person: Philippe Rocca-Serra</oboOther:IAO_0000117>
<oboOther:IAO_0000119>ISA tools project (http://isa-tools.org)</oboOther:IAO_0000119>
<rdfs:label xml:lang="en">ISA alternative term</rdfs:label>
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000118"/>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
<!-- http://purl.org/dc/elements/1.1/format -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/format"/>
<!-- http://purl.org/dc/elements/1.1/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
<!-- http://www.ebi.ac.uk/efo/definition_editor -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/definition_editor"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDefinition -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDefinition"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#inSubset -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
<!-- http://www.semanticweb.org/owl/owlapi/turtle#created_in -->
<owl:AnnotationProperty rdf:about="http://www.semanticweb.org/owl/owlapi/turtle#created_in"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment"/>
<!-- http://www.w3.org/2000/01/rdf-schema#label -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#label"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Datatypes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://www.w3.org/1999/02/22-rdf-syntax-ns#PlainLiteral -->
<rdfs:Datatype rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#PlainLiteral"/>
<!-- http://www.w3.org/2001/XMLSchema#boolean -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#boolean"/>
<!-- http://www.w3.org/2001/XMLSchema#int -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#int"/>
<!-- http://www.w3.org/2001/XMLSchema#long -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#long"/>
<!-- http://www.w3.org/2001/XMLSchema#string -->
<rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#string"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/BFO_0000051 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000066"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000471"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000006"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000471"/>
</owl:unionOf>
</owl:Class>
</rdfs:range>
<oboOther:IAO_0000111 xml:lang="en">has part</oboOther:IAO_0000111>
<oboOther:IAO_0000118 xml:lang="en">has_part</oboOther:IAO_0000118>
<oboOther:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/obi.owl"/>
<rdfs:label xml:lang="en">has part</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000087 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000087">
<rdfs:label xml:lang="en">has role</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000015 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000015">
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000066"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000471"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0400103"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range rdf:resource="http://purl.org/dc/terms/Agent"/>
<oboOther:IAO_0000115 xml:lang="en">Possession relation between an agent and a study or pipeline.</oboOther:IAO_0000115>
<rdfs:label xml:lang="en">Belong To</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000020 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000020">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000072"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0400103"/>
<rdfs:label xml:lang="en">Sequenced on</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000022 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000022">
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000064"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000069"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000072"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range rdf:resource="http://edamontology.org/data_2527"/>
<rdfs:label xml:lang="en">used Parameter</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000023 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000023">
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000064"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000069"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/IAO_0000010"/>
<rdfs:label xml:lang="en">used Software</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000063 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000063">
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000064"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NGS_0000069"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/IAO_0000591"/>
<rdfs:label xml:lang="en">used function</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000076 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000076">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0000471"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/NGS_0000074"/>
<rdfs:label xml:lang="en">execute</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000077 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000077">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000075"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
<rdfs:label xml:lang="en">has protocol</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000078 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000078">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/NGS_0000075"/>
<rdfs:label xml:lang="en">has step</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000079 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000079">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000074"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<rdfs:label xml:lang="en">has workflow</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000091 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000091">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000006"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
<rdfs:label>is a Run of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0001950 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0001950">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<rdfs:range>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000245"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000968"/>
</owl:unionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000202"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:range>
<oboOther:IAO_0000111 xml:lang="en">has performer</oboOther:IAO_0000111>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000428"/>
<oboOther:IAO_0000117 xml:lang="en">performer relation covers the need to report on who performed a planned processed. it has to cover processes done by People or Devices (such as a robot controlled by software WF management system)</oboOther:IAO_0000117>
<oboOther:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/obi.owl"/>
<rdfs:label xml:lang="en">has performer</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002224 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002224">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:label xml:lang="en">starts with</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002230 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002230">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:label xml:lang="en">ends with</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002233 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002233">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000006"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/NGS_0000061"/>
<owl:propertyChainAxiom rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002224"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002233"/>
</owl:propertyChainAxiom>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<oboOther:IAO_0000115>p has input c if either: p has direct input c or p has indirect input c. See subrelations for definitions.</oboOther:IAO_0000115>
<oboOther:IAO_0000118>consumes</oboOther:IAO_0000118>
<oboOther:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ro.owl"/>
<rdfs:label xml:lang="en">has input</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002234 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002234">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/NGS_0000006"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/NGS_0000061"/>
<owl:propertyChainAxiom rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002230"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002234"/>
</owl:propertyChainAxiom>
<oboOther:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<oboOther:IAO_0000115>p has output c if either: p has direct output c or p has output input c. See subrelations for definitions.</oboOther:IAO_0000115>
<oboOther:IAO_0000118>produces</oboOther:IAO_0000118>
<oboOther:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ro.owl"/>
<rdfs:label xml:lang="en">has output</rdfs:label>
</owl:ObjectProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Data properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/NGS_0000024 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000024">
<rdfs:label xml:lang="en">adaptor</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000025 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000025">
<rdfs:label xml:lang="en">ammount DNA</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000028 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000028">
<rdfs:label xml:lang="en">buffer</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000030 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000030">
<rdfs:label xml:lang="en">end repair enzyme</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000031 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000031">
<rdfs:label xml:lang="en">extraction method</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000032 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000032">
<rdfs:label xml:lang="en">file</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000033 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000033">
<rdfs:label xml:lang="en">file extension</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000034 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000034">
<rdfs:label xml:lang="en">fragmentation method</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000038 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000038">
<rdfs:label xml:lang="en">library type</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000040 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000040">
<rdfs:label xml:lang="en">name</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000041 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000041">
<rdfs:label xml:lang="en">parameter designation</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000042 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000042">
<rdfs:label xml:lang="en">parameter value</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000043 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000043">
<rdfs:label xml:lang="en">range of fragments size</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000045 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000045">
<rdfs:label xml:lang="en">reference genome</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000046 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000046">
<rdfs:label xml:lang="en">scaffolding</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000047 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000047">
<rdfs:label xml:lang="en">script file</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000048 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000048">
<rdfs:label xml:lang="en">script language</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000049 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000049">
<rdfs:label xml:lang="en">sequence coverage</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000051 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000051">
<rdfs:label xml:lang="en">size selector</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000052 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000052">
<rdfs:label xml:lang="en">software version</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000053 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000053">
<rdfs:label xml:lang="en">strategy</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000054 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000054">
<rdfs:label xml:lang="en">study description</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000055 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000055">
<rdfs:label xml:lang="en">study title</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000056 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000056">
<rdfs:label xml:lang="en">study type</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000057 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000057">
<rdfs:label xml:lang="en">tailing</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000058 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000058">
<rdfs:label xml:lang="en">uri</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000059 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000059">
<rdfs:label xml:lang="en">version</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000080 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000080">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">date</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000081 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000081">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">index</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000084 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000084">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DNA Extraction kit name</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000085 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000085">
<rdfs:label>password</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000086 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000086">
<rdfs:label xml:lang="en">Activation</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000087 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000087">
<rdfs:label>username</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000089 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000089">
<rdfs:label>Task ID</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000092 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000092">
<rdfs:label>Run Info</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000093 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000093">
<rdfs:label>Assembly</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000094 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000094">
<rdfs:label>Run Stats</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000095 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000095">
<rdfs:label>matrix</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000096 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000096">
<rdfs:label>Run log</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/NGS_0000097 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/NGS_0000097">
<rdfs:label>status</rdfs:label>
</owl:DatatypeProperty>
<!-- http://xmlns.com/foaf/0.1/mbox -->
<owl:DatatypeProperty rdf:about="http://xmlns.com/foaf/0.1/mbox">
<rdfs:label xml:lang="en">mail box</rdfs:label>
</owl:DatatypeProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://edamontology.org/data_2527 -->
<owl:Class rdf:about="http://edamontology.org/data_2527">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000027"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/NGS_0000041"/>
<owl:someValuesFrom rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/NGS_0000042"/>
<owl:someValuesFrom rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
</owl:Restriction>
</rdfs:subClassOf>
<edamontology:created_in>beta12orEarlier</edamontology:created_in>
<edamontology:def>"Typically a simple numerical or string value that controls the operation of a tool." [http://edamontology.org]</edamontology:def>
<edamontology:editor_note>Slightly narrower in the sense of changing the characteristics of a system/function.</edamontology:editor_note>