diff --git a/pyfaidx/cli.py b/pyfaidx/cli.py index e3db4de..67695f5 100644 --- a/pyfaidx/cli.py +++ b/pyfaidx/cli.py @@ -80,7 +80,7 @@ def fetch_sequence(args, fasta, name, start=None, end=None): pass else: if (start or end) and not args.no_coords: - yield ''.join(['>', sequence.long_name, '\n']) + yield ''.join(['>', sequence.fancy_name, '\n']) else: yield ''.join(['>', sequence.name, '\n']) for line in wrap_sequence(line_len, sequence.seq):