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gaussian_filter1d
init_args
This config:
outputs: - wf_current processors: wf_gaus: description: Gaussian-filtered raw waveform function: gaussian_filter1d module: dspeed.processors args: - waveform_bit_drop - wf_gaus( len(waveform_bit_drop), period=waveform_bit_drop.period, offset=waveform_bit_drop.offset ) init_args: - db.gauss.width - "10" defaults: db.gauss.width: 2 unit: ADC wf_current: description: First derivative of gaussian-filtered waveform function: avg_current module: dspeed.processors args: - wf_gaus - db.current.width - wf_current( len(wf_gaus) - db.current.width, period=wf_gaus.period, offset=wf_gaus.offset + db.current.width // 2 * wf_gaus.period ) defaults: db.current.width: 2 unit: ADC/sample
causes this:
2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2225 - prereqs for wf_gaus are ['waveform_bit_drop'] 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2197 - Database lookup: using default value of 2 for db.current.width 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2197 - Database lookup: using default value of 2 for db.current.width 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2197 - Database lookup: using default value of 2 for db.current.width 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2225 - prereqs for curr are ['wf_gaus'] 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2281 - processing parameters: ['wf_gaus', 'curr'] 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2282 - required input parameters: ['waveform_bit_drop'] 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2283 - copied output parameters: [] 2025-02-24 23:52:47,675 - dspeed - DEBUG - build_processing_chain - 2284 - processed output parameters: ['curr'] 2025-02-24 23:52:47,676 - dspeed - DEBUG - __init__ - 203 - added variable: waveform_bit_drop(shape: auto, dtype: auto, grid: auto, unit: auto, is_coord: auto) 2025-02-24 23:52:47,676 - dspeed - DEBUG - __init__ - 203 - added variable: waveform_bit_drop_dt(shape: (), dtype: float32, grid: None, unit: ns, is_coord: True) 2025-02-24 23:52:47,676 - dspeed - DEBUG - update_auto - 363 - updated variable: waveform_bit_drop(shape: (1024,), dtype: uint16, grid: (16.0 nanosecond,waveform_bit_drop_dt), unit: None, is_coord: False) 2025-02-24 23:52:47,678 - dspeed - DEBUG - link_input_buffer - 588 - added input buffer: waveform_bit_drop linked to lgdo.WaveformTable(values(shape=(1000, 1024), dtype=uint16, attrs={'datatype': 'array_of_equalsized_arrays<1,1>{real}'}), dt(shape=(1000,), dtype=float32, attrs={'datatype': 'array<1>{real}', 'units': 'ns'}), t0(shape=(1000,), dtype=float32, attrs={'datatype': 'array<1>{real}', 'units': 'ns'})) 2025-02-24 23:52:47,678 - dspeed - DEBUG - __init__ - 203 - added variable: wf_gaus(shape: auto, dtype: auto, grid: auto, unit: ADC, is_coord: auto) 2025-02-24 23:52:47,678 - dspeed - DEBUG - build_processing_chain - 2376 - database lookup: using default value of {db_node} for {db_var} 2025-02-24 23:52:47,678 - dspeed - DEBUG - build_processing_chain - 2402 - building function from init_args: gaussian_filter1d(2, 10) 2025-02-24 23:52:47,706 - dspeed - DEBUG - update_auto - 363 - updated variable: wf_gaus(shape: (1024,), dtype: auto, grid: (16.0 nanosecond,waveform_bit_drop_dt), unit: ADC, is_coord: auto) 2025-02-24 23:52:47,706 - dspeed - DEBUG - update_auto - 363 - updated variable: wf_gaus(shape: (1024,), dtype: float32, grid: (16.0 nanosecond,waveform_bit_drop_dt), unit: ADC, is_coord: False) 2025-02-24 23:52:47,707 - dspeed - DEBUG - add_processor - 701 - added processor: gaussian_filter1d_out(waveform_bit_drop, wf_gaus) 2025-02-24 23:52:47,707 - dspeed - DEBUG - __init__ - 203 - added variable: curr(shape: auto, dtype: auto, grid: auto, unit: ADC/sample, is_coord: auto) 2025-02-24 23:52:47,707 - dspeed - DEBUG - __init__ - 203 - added variable: (waveform_bit_drop_dt+16.0 nanosecond)(shape: auto, dtype: auto, grid: auto, unit: ns, is_coord: True) 2025-02-24 23:52:47,708 - dspeed - DEBUG - update_auto - 363 - updated variable: (waveform_bit_drop_dt+16.0 nanosecond)(shape: (), dtype: float32, grid: (1 nanosecond,0 nanosecond), unit: ns, is_coord: True) 2025-02-24 23:52:47,708 - dspeed - DEBUG - _parse_expr - 870 - added processor: add(waveform_bit_drop_dt, 16.0 nanosecond, (waveform_bit_drop_dt+16.0 nanosecond)) 2025-02-24 23:52:47,709 - dspeed - DEBUG - update_auto - 363 - updated variable: curr(shape: (1022,), dtype: auto, grid: (16.0 nanosecond,(waveform_bit_drop_dt+16.0 nanosecond)), unit: ADC/sample, is_coord: auto) 2025-02-24 23:52:47,709 - dspeed - DEBUG - update_auto - 363 - updated variable: curr(shape: (1022,), dtype: float32, grid: (16.0 nanosecond,(waveform_bit_drop_dt+16.0 nanosecond)), unit: ADC/sample, is_coord: False) 2025-02-24 23:52:47,709 - dspeed - DEBUG - add_processor - 701 - added processor: avg_current(wf_gaus, 2, curr) 2025-02-24 23:52:47,711 - dspeed - DEBUG - link_output_buffer - 668 - added output buffer: curr linked to lgdo.WaveformTable(values(shape=(1000, 1022), dtype=float32, attrs={'datatype': 'array_of_equalsized_arrays<1,1>{real}'}), dt(shape=(1000,), dtype=float32, attrs={'datatype': 'array<1>{real}', 'units': 'ns'}), t0(shape=(1000,), dtype=float32, attrs={'datatype': 'array<1>{real}', 'units': 'ns'})) Traceback (most recent call last): File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/.snakemake/legend-dataflow/venv/bin/par-spms-dsp-trg-thr", line 10, in <module> sys.exit(par_spms_dsp_trg_thr()) ^^^^^^^^^^^^^^^^^^^^^^ File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/workflow/src/legenddataflow/scripts/par/spms/dsp/trigger_threshold.py", line 63, in par_spms_dsp_trg_thr chain.execute() File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/.snakemake/legend-dataflow/venv/lib/python3.12/site-packages/dspeed/processing_chain.py", line 708, in execute self._execute_procs(i, min(i + self._block_width, self._buffer_len)) File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/.snakemake/legend-dataflow/venv/lib/python3.12/site-packages/dspeed/processing_chain.py", line 1120, in _execute_procs proc_man.execute() File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/.snakemake/legend-dataflow/venv/lib/python3.12/site-packages/dspeed/processing_chain.py", line 1571, in execute self.processor(*self.args, **self.kwargs) File "/data1/shared/l200-p13/prodenv/prod-orig/dev-v0.0.2/.snakemake/legend-dataflow/venv/lib/python3.12/site-packages/numba/np/ufunc/gufunc.py", line 261, in __call__ return self.ufunc(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ IndexError: list index out of range
This is because
init_args: - db.gauss.width - "10"
is an invalid initialization for the gaussian kernel, but dspeed should try to print a more informative error message?
The text was updated successfully, but these errors were encountered:
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This config:
causes this:
This is because
is an invalid initialization for the gaussian kernel, but dspeed should try to print a more informative error message?
The text was updated successfully, but these errors were encountered: