diff --git a/docs/install.md b/docs/install.md index 14d813c7..66d423f1 100644 --- a/docs/install.md +++ b/docs/install.md @@ -21,7 +21,7 @@ git clone https://github.com/jotech/gapseq && cd gapseq ## MacOS using [homebrew](https://brew.sh) ``` -brew install coreutils binutils git glpk blast bedtools r brewsci/bio/barrnap +brew install coreutils binutils git glpk blast bedtools r brewsci/bio/barrnap grep R -e 'install.packages(c("data.table", "stringr", "sybil", "getopt", "reshape2", "doParallel", "foreach", "R.utils", "stringi", "glpkAPI"))' R -e 'if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager"); BiocManager::install("Biostrings")' git clone https://github.com/jotech/gapseq && cd gapseq