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Commits on Apr 26, 2016

• Merge pull request galaxyproject#368 from mvdbeek/bwa_data_manager_dep_upgrade

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• Bump version with dependency upgrade

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• Upgrade bwa_mem_index_builder's bwa dependency to 0.7.12

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Commits on Apr 12, 2016

• Merge pull request galaxyproject#364 from ChristopheH/ChristopheH-patch-1

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Commits on Apr 11, 2016

• Merge pull request galaxyproject#361 from jmchilton/fastqc_test_data_fix

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Commits on Apr 7, 2016

• Version number modified

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• Quote missing

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• Update vcftools_merge.xml

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Commits on Mar 30, 2016

• Update FastQC to trust PATH.

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  jmchilton

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• Update FastQC test data for 0.11.4.

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Commits on Mar 24, 2016

• add tool repo to readne

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Commits on Mar 23, 2016

• Merge pull request galaxyproject#359 from blankenberg/kraken

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• Kraken: only the first <requirements> is used.

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Commits on Mar 21, 2016

• Merge pull request galaxyproject#356 from mvdbeek/bowtie2_samtools

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• bump version number

  mvdbeek

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• Implement aligned option.

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• Merge pull request galaxyproject#355 from blankenberg/kraken

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• Update kraken tool_dependencies.xml

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Commits on Mar 19, 2016

• Add IUC channel

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Commits on Mar 18, 2016

• Merge pull request galaxyproject#354 from jmchilton/fastq_interlace_citation

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• Merge pull request galaxyproject#353 from nsoranzo/master

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• Enable conda testing of fastq_paired_end_interlacer.

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• Remove deprecated "interpreter" attribute.

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• Add paired dataset collection support.

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• Add citation to empty citation block added with galaxyproject#353.

  jmchilton

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• Merge pull request galaxyproject#352 from blankenberg/kraken

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• Add additional package requirement of 0.10.6_eaf8fb68 for Kraken, to allow conda resolution.

  blankenberg

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• Remove Kraken from testing blacklist.

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• Update kraken tools to use 0.10.6-eaf8fb68 kraken dependency.

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Commits on Mar 17, 2016

• Merge pull request galaxyproject#351 from zfrenchee/master

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Commits on Mar 16, 2016

• Update samtool_filter2.xml

  

  Alexander Lenail

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• Merge pull request galaxyproject#1 from zfrenchee/patch-3

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• Update tool_dependencies.xml

  

  Alexander Lenail

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• Remove samtool_filter2 from the testing blacklist

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Commits on Mar 8, 2016

• Merge pull request galaxyproject#344 from galaxyproject/travis

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