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_pkgdown.yml
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reference:
- title: Package overview
desc: ~
contents:
- '`gphys-package`'
- title: Read/plot ephys data
desc: ~
contents:
- '`PlotRasterFromSweeps`'
- '`PlotOdourResponseFromSpikes`'
- '`CollectSpikesFromSweeps`'
- '`AddLinesToRasterPlot`'
- '`MakeAverageWaves`'
- '`IgorWavesForSpikes`'
- title: Summarising responses
desc: ~
contents:
- '`OdourResponseFromSpikes`'
- '`lifetime_sparseness`'
- title: Odour delivery information
desc: ~
contents:
- '`read.odd`'
- '`fix.odd`'
- title: Spike trains
desc: ~
contents:
- '`as.repeatedTrain`'
- '`spiketimes`'
- '`split.spiketimes`'
- '`merge.spiketimes`'
- '`divide`'
- '`is.spiketimes`'
- '`subset.spiketimes`'
- '`[.spiketimes`'
- '`+.spiketimes`'
- title: Time series helper functions/methods
desc: ~
contents:
- '`smooth_decimate`'
- '`scale.ts`'
- '`mean.mts`'
- '`tsp.nclamppxp`'
- '`tsp.psth`'
- title: PSTH helper functions/methods
desc: These help interact with STAR package smoothed peristimulus time histogram objects
contents:
- '`smpsth`'
- '`[.mpsth`'
- '`as.ts.mpsth`'
- '`as.ts.psth`'
- '`as.mpsth`'
- '`plot.mpsth`'
- title: Miscellaneous utility functions
desc: ~
contents:
- '`finder_colour`'
- '`finder_colour_fast`'
- '`set_finder_colour`'