diff --git a/setup.py b/setup.py
index e0ac028a4..3e6f51064 100644
--- a/setup.py
+++ b/setup.py
@@ -32,10 +32,11 @@
         "funlib.math>=0.1",
         "funlib.geometry>=0.2",
         "mwatershed>=0.1",
-        "funlib.persistence>=0.1",
+        "funlib.persistence @ git+https://github.com/janelia-cellmap/funlib.persistence",
         "funlib.evaluate @ git+https://github.com/pattonw/funlib.evaluate",
         "gunpowder>=1.3",
-        "lsds>=0.1.3",
+        # "lsds>=0.1.3",
+        "lsds @ git+https://github.com/funkelab/lsd",
         "xarray",
         "cattrs",
         "numpy-indexed",