From d72818ee1beb8e6621872d56418488fd25890206 Mon Sep 17 00:00:00 2001 From: Vedha Viyash <49812166+vedhav@users.noreply.github.com> Date: Mon, 3 Feb 2025 20:29:32 +0530 Subject: [PATCH 1/4] Make sure the code chunks does not break because of warnings (#1327) Part of vignette review https://github.com/insightsengineering/nestdevs-tasks/issues/99 --- vignettes/teal-modules-clinical.Rmd | 8 +++----- 1 file changed, 3 insertions(+), 5 deletions(-) diff --git a/vignettes/teal-modules-clinical.Rmd b/vignettes/teal-modules-clinical.Rmd index 5561bb2ec5..3824e06d01 100644 --- a/vignettes/teal-modules-clinical.Rmd +++ b/vignettes/teal-modules-clinical.Rmd @@ -46,7 +46,7 @@ See the full index of package functions & modules [here](https://insightsenginee A `teal.modules.clinical` module needs to be embedded inside a `shiny`/`teal` application to interact with it. A simple application including a bar chart module could look like this: -```{r app, message = FALSE, results = "hide"} +```{r app, eval=FALSE} library(teal.modules.clinical) library(nestcolor) @@ -82,9 +82,7 @@ app <- init( ) ) ) -``` -```{r shinyapp, eval = FALSE} shinyApp(app$ui, app$server) ``` @@ -170,7 +168,7 @@ app <- init( Finally, we use `shiny` to launch the application: ```r -if (interactive()) shinyApp(app$ui, app$server) +shinyApp(app$ui, app$server) ``` Some `teal.modules.clinical` modules allow for the specification of arguments using @@ -194,7 +192,7 @@ app <- init( ) ) -if (interactive()) shinyApp(app$ui, app$server) +shinyApp(app$ui, app$server) ``` Please refer to the [API reference](https://insightsengineering.github.io/teal.modules.clinical/latest-tag/reference/) From 672014f34d51a7867cd54c70246660d541880007 Mon Sep 17 00:00:00 2001 From: vedhav <49812166+vedhav@users.noreply.github.com> Date: Mon, 3 Feb 2025 15:00:35 +0000 Subject: [PATCH 2/4] [skip actions] Bump version to 0.9.1.9056 --- DESCRIPTION | 4 ++-- NEWS.md | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 0dd4a85da7..7f5ba86875 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: teal.modules.clinical Title: 'teal' Modules for Standard Clinical Outputs -Version: 0.9.1.9055 -Date: 2025-01-30 +Version: 0.9.1.9056 +Date: 2025-02-03 Authors@R: c( person("Joe", "Zhu", , "joe.zhu@roche.com", role = c("aut", "cre")), person("Jana", "Stoilova", , "jana.stoilova@roche.com", role = "aut"), diff --git a/NEWS.md b/NEWS.md index 6638730a03..16cb7b5270 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# teal.modules.clinical 0.9.1.9055 +# teal.modules.clinical 0.9.1.9056 ### Enhancements * Added `teal.logger` functionality for logging changes in shiny inputs in all modules. From a755f5f2a2bf6e7bc2e16063e9d36fe559c39d7f Mon Sep 17 00:00:00 2001 From: Marcin <133694481+m7pr@users.noreply.github.com> Date: Wed, 5 Feb 2025 16:00:26 +0100 Subject: [PATCH 3/4] vbump teal.widgets (#1328) Vbumps teal.widgets to the newest CRAN release version Signed-off-by: Marcin <133694481+m7pr@users.noreply.github.com> --- DESCRIPTION | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 7f5ba86875..9d0994b90e 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -59,7 +59,7 @@ Imports: teal.data (>= 0.7.0), teal.logger (>= 0.3.1), teal.reporter (>= 0.4.0), - teal.widgets (>= 0.4.2.9025), + teal.widgets (>= 0.4.3), tern.gee (>= 0.1.5), tern.mmrm (>= 0.3.1), utils, @@ -82,8 +82,7 @@ VignetteBuilder: rmarkdown Remotes: insightsengineering/teal, - insightsengineering/teal.transform, - insightsengineering/teal.widgets + insightsengineering/teal.transform Config/Needs/verdepcheck: insightsengineering/teal, insightsengineering/teal.slice, insightsengineering/teal.transform, insightsengineering/tern, tidymodels/broom, mllg/checkmate, From e8af72520985353e28591de9ec4fd7507a964964 Mon Sep 17 00:00:00 2001 From: m7pr <133694481+m7pr@users.noreply.github.com> Date: Wed, 5 Feb 2025 15:01:20 +0000 Subject: [PATCH 4/4] [skip actions] Bump version to 0.9.1.9057 --- DESCRIPTION | 4 ++-- NEWS.md | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 9d0994b90e..6a9f1b6534 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: teal.modules.clinical Title: 'teal' Modules for Standard Clinical Outputs -Version: 0.9.1.9056 -Date: 2025-02-03 +Version: 0.9.1.9057 +Date: 2025-02-05 Authors@R: c( person("Joe", "Zhu", , "joe.zhu@roche.com", role = c("aut", "cre")), person("Jana", "Stoilova", , "jana.stoilova@roche.com", role = "aut"), diff --git a/NEWS.md b/NEWS.md index 16cb7b5270..50a5c3a2a0 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# teal.modules.clinical 0.9.1.9056 +# teal.modules.clinical 0.9.1.9057 ### Enhancements * Added `teal.logger` functionality for logging changes in shiny inputs in all modules.