cds.application.yaml

#Uncomment the "servlet" and "context-path" lines below to make the fhir endpoint available at /example/path/fhir instead of the default value of /fhir
server:
#  servlet:
#    context-path: /example/path
  port: 8080
#Adds the option to go to eg. http://localhost:8080/actuator/health for seeing the running configuration
#see https://docs.spring.io/spring-boot/docs/current/reference/html/actuator.html#actuator.endpoints
management:
  #The following configuration will enable the actuator endpoints at /actuator/health, /actuator/info, /actuator/prometheus, /actuator/metrics. For security purposes, only /actuator/health is enabled by default.
  endpoints:
    enabled-by-default: false
    web:
      exposure:
        include: 'health' # or e.g. 'info,health,prometheus,metrics' or '*' for all'
  endpoint:
    info:
      enabled: true
    metrics:
      enabled: true
    health:
      enabled: true
      probes:
        enabled: true
      group:
        liveness:
          include:
            - livenessState
            - readinessState
    prometheus:
      enabled: true
  prometheus:
    metrics:
      export:
        enabled: true
spring:
  main:
    allow-circular-references: true
    allow-bean-definition-overriding: true
  flyway:
    enabled: false
    baselineOnMigrate: true
    fail-on-missing-locations: false
  datasource:
    #url: 'jdbc:h2:file:./target/database/h2'
    url: jdbc:h2:mem:test_mem
    username: sa
    password: null
    driverClassName: org.h2.Driver
    max-active: 15

    # database connection pool size
    hikari:
      maximum-pool-size: 10
  jpa:
    properties:
      hibernate.format_sql: false
      hibernate.show_sql: false

      #Hibernate dialect is automatically detected except Postgres and H2.
      #If using H2, then supply the value of ca.uhn.fhir.jpa.model.dialect.HapiFhirH2Dialect
      #If using postgres, then supply the value of ca.uhn.fhir.jpa.model.dialect.HapiFhirPostgres94Dialect
      hibernate.dialect: ca.uhn.fhir.jpa.model.dialect.HapiFhirH2Dialect
  #      hibernate.hbm2ddl.auto: update
  #      hibernate.jdbc.batch_size: 20
  #      hibernate.cache.use_query_cache: false
  #      hibernate.cache.use_second_level_cache: false
  #      hibernate.cache.use_structured_entries: false
  #      hibernate.cache.use_minimal_puts: false

  ###    These settings will enable fulltext search with lucene or elastic
      hibernate.search.enabled: true
  ### lucene parameters
#      hibernate.search.backend.type: lucene
#      hibernate.search.backend.analysis.configurer: ca.uhn.fhir.jpa.search.HapiHSearchAnalysisConfigurers$HapiLuceneAnalysisConfigurer
#      hibernate.search.backend.directory.type: local-filesystem
#      hibernate.search.backend.directory.root: target/lucenefiles
#      hibernate.search.backend.lucene_version: lucene_current
  ### elastic parameters ===> see also elasticsearch section below <===
#      hibernate.search.backend.type: elasticsearch
#      hibernate.search.backend.analysis.configurer: ca.uhn.fhir.jpa.search.HapiHSearchAnalysisConfigurers$HapiElasticAnalysisConfigurer
hapi:
  fhir:
    ### This flag when enabled to true, will avail evaluate measure operations from CR Module.
    ### Flag is false by default, can be passed as command line argument to override.
    cr:
      enabled: true
      caregaps:
        reporter: "default"
        section_author: "default"
      cql:
        use_embedded_libraries: true
        compiler:
          ### These are low-level compiler options.
          ### They are not typically needed by most users.
          # validate_units: true
          # verify_only: false
          # compatibility_level: "1.5"
          error_level: Info
          signature_level: All
          # analyze_data_requirements: false
          # collapse_data_requirements: false
          # translator_format: JSON
          # enable_date_range_optimization: true
          enable_annotations: true
          enable_locators: true
          enable_results_type: true
          enable_detailed_errors: true
          # disable_list_traversal: false
          # disable_list_demotion: false
          # enable_interval_demotion: false
          # enable_interval_promotion: false
          # disable_method_invocation: false
          # require_from_keyword: false
          # disable_default_model_info_load: false
        runtime:
          debug_logging_enabled: false
          # enable_validation: false
          # enable_expression_caching: true
        terminology:
          valueset_preexpansion_mode: REQUIRE # USE_IF_PRESENT, REQUIRE, IGNORE
          valueset_expansion_mode: PERFORM_NAIVE_EXPANSION # AUTO, USE_EXPANSION_OPERATION, PERFORM_NAIVE_EXPANSION
          valueset_membership_mode: USE_EXPANSION # AUTO, USE_VALIDATE_CODE_OPERATION, USE_EXPANSION
          code_lookup_mode: USE_CODESYSTEM_URL # AUTO, USE_VALIDATE_CODE_OPERATION, USE_CODESYSTEM_URL
        data:
          search_parameter_mode: USE_SEARCH_PARAMETERS # AUTO, USE_SEARCH_PARAMETERS, FILTER_IN_MEMORY
          terminology_parameter_mode: FILTER_IN_MEMORY #  AUTO, USE_VALUE_SET_URL, USE_INLINE_CODES, FILTER_IN_MEMORY
          profile_mode: OFF # ENFORCED, DECLARED, OPTIONAL, TRUST, OFF

    cdshooks:
      enabled: true
      clientIdHeaderName: client_id

    ### This enables the swagger-ui at /fhir/swagger-ui/index.html as well as the /fhir/api-docs (see https://hapifhir.io/hapi-fhir/docs/server_plain/openapi.html)
    openapi_enabled: true
    ### This is the FHIR version. Choose between, DSTU2, DSTU3, R4 or R5
    fhir_version: R4
    ### Flag is false by default. This flag enables runtime installation of IG's.
    ig_runtime_upload_enabled: false
    ### This flag when enabled to true, will avail evaluate measure operations from CR Module.

    ### enable to use the ApacheProxyAddressStrategy which uses X-Forwarded-* headers
    ### to determine the FHIR server address
    #   use_apache_address_strategy: false
    ### forces the use of the https:// protocol for the returned server address.
    ### alternatively, it may be set using the X-Forwarded-Proto header.
    #   use_apache_address_strategy_https: false
    ### enables the server to overwrite defaults on HTML, css, etc. under the url pattern of eg. /content/custom **
    ### Folder with custom content MUST be named custom. If omitted then default content applies
    #custom_content_path: ./custom
    ### enables the server host custom content. If e.g. the value ./configs/app is supplied then the content
    ### will be served under /web/app
    #app_content_path: ./configs/app
    ### enable to set the Server URL
    #    server_address: http://hapi.fhir.org/baseR4
    #    defer_indexing_for_codesystems_of_size: 101
    ### Flag is true by default. This flag filters resources during package installation, allowing only those resources with a valid status (e.g. active) to be installed.
    #    validate_resource_status_for_package_upload: false 
    #    install_transitive_ig_dependencies: true
    #implementationguides:
    ###    example from registry (packages.fhir.org)
    #  swiss:
    #    name: swiss.mednet.fhir
    #    version: 0.8.0
    #    reloadExisting: false
    #    installMode: STORE_AND_INSTALL
    #      example not from registry
    #      ips_1_0_0:
    #        packageUrl: https://build.fhir.org/ig/HL7/fhir-ips/package.tgz
    #        name: hl7.fhir.uv.ips
    #        version: 1.0.0
    #    supported_resource_types:
    #      - Patient
    #      - Observation
    ##################################################
    # Allowed Bundle Types for persistence (defaults are: COLLECTION,DOCUMENT,MESSAGE)
    ##################################################
    #    allowed_bundle_types: COLLECTION,DOCUMENT,MESSAGE,TRANSACTION,TRANSACTIONRESPONSE,BATCH,BATCHRESPONSE,HISTORY,SEARCHSET
    #    allow_cascading_deletes: true
    #    allow_contains_searches: true
    allow_external_references: true
    #    allow_multiple_delete: true
    #    allow_override_default_search_params: true
    #    auto_create_placeholder_reference_targets: false
    ### tells the server to automatically append the current version of the target resource to references at these paths
    #    auto_version_reference_at_paths: Device.patient, Device.location, Device.parent, DeviceMetric.parent, DeviceMetric.source, Observation.device, Observation.subject
    #    ips_enabled: false
    #    default_encoding: JSON
    #    default_pretty_print: true
    #    default_page_size: 20
    #    delete_expunge_enabled: true
    #    enable_repository_validating_interceptor: true
    #    enable_index_missing_fields: false
    #    enable_index_of_type: true
    #    enable_index_contained_resource: false
    #    resource_dbhistory_enabled: false
    ###  !!Extended Lucene/Elasticsearch Indexing is still a experimental feature, expect some features (e.g. _total=accurate) to not work as expected!!
    ###  more information here: https://hapifhir.io/hapi-fhir/docs/server_jpa/elastic.html
    advanced_lucene_indexing: false
    bulk_export_enabled: false
    bulk_import_enabled: false
    #    language_search_parameter_enabled: true
    #    enforce_referential_integrity_on_delete: false
    # This is an experimental feature, and does not fully support _total and other FHIR features.
    #    enforce_referential_integrity_on_delete: false
    #    enforce_referential_integrity_on_write: false
    #    etag_support_enabled: true
    #    expunge_enabled: true
    #    client_id_strategy: ALPHANUMERIC
    #    server_id_strategy: SEQUENTIAL_NUMERIC
    #    fhirpath_interceptor_enabled: false
    #    filter_search_enabled: true
    #    graphql_enabled: true
    narrative_enabled: false
    mdm_enabled: false
    mdm_rules_json_location: "mdm-rules.json"
    #    local_base_urls:
    #      - https://hapi.fhir.org/baseR4
    logical_urls:
      - http://terminology.hl7.org/*
      - https://terminology.hl7.org/*
      - http://snomed.info/*
      - https://snomed.info/*
      - http://unitsofmeasure.org/*
      - https://unitsofmeasure.org/*
      - http://loinc.org/*
      - https://loinc.org/*
    #    partitioning:
    #      allow_references_across_partitions: false
    #      partitioning_include_in_search_hashes: false
    #      conditional_create_duplicate_identifiers_enabled: false
    cors:
      allow_Credentials: true
      # These are allowed_origin patterns, see: https://docs.spring.io/spring-framework/docs/current/javadoc-api/org/springframework/web/cors/CorsConfiguration.html#setAllowedOriginPatterns-java.util.List-
      allowed_origin:
        - '*'

    # Search coordinator thread pool sizes
    search-coord-core-pool-size: 20
    search-coord-max-pool-size: 100
    search-coord-queue-capacity: 200
    
    # comma-separated package names, will be @ComponentScan'ed by Spring to allow for creating custom Spring beans
    #custom-bean-packages:
    
    # comma-separated list of fully qualified interceptor classes. 
    # classes listed here will be fetched from the Spring context when combined with 'custom-bean-packages', 
    # or will be instantiated via reflection using an no-arg contructor; then registered with the server  
    #custom-interceptor-classes:  

    # comma-separated list of fully qualified provider classes. 
    # classes listed here will be fetched from the Spring context when combined with 'custom-bean-packages', 
    # or will be instantiated via reflection using an no-arg contructor; then registered with the server  
    #custom-provider-classes:  
    
    # Threadpool size for BATCH'ed GETs in a bundle.
    #    bundle_batch_pool_size: 10
    #    bundle_batch_pool_max_size: 50

    #    logger:
    #      error_format: 'ERROR - ${requestVerb} ${requestUrl}'
    #      format: >-
    #        Path[${servletPath}] Source[${requestHeader.x-forwarded-for}]
    #        Operation[${operationType} ${operationName} ${idOrResourceName}]
    #        UA[${requestHeader.user-agent}] Params[${requestParameters}]
    #        ResponseEncoding[${responseEncodingNoDefault}]
    #      log_exceptions: true
    #      name: fhirtest.access
    #    max_binary_size: 104857600
    #    max_page_size: 200
    #    retain_cached_searches_mins: 60
    #    reuse_cached_search_results_millis: 60000
    tester:
      home:
        name: Local Tester
        server_address: 'http://localhost:8080/fhir'
        refuse_to_fetch_third_party_urls: false
        fhir_version: R4
      global:
        name: Global Tester
        server_address: "http://hapi.fhir.org/baseR4"
        refuse_to_fetch_third_party_urls: false
        fhir_version: R4
    #    validation:
    #      requests_enabled: true
    #      responses_enabled: true
    #    binary_storage_enabled: true
    inline_resource_storage_below_size: 4000
#    bulk_export_enabled: true
#    subscription:
#      resthook_enabled: true
#      websocket_enabled: false
#      email:
#        from: some@test.com
#        host: google.com
#        port:
#        username:
#        password:
#        auth:
#        startTlsEnable:
#        startTlsRequired:
#        quitWait:
#    lastn_enabled: true
#    store_resource_in_lucene_index_enabled: true
###  This is configuration for normalized quantity search level default is 0
###   0: NORMALIZED_QUANTITY_SEARCH_NOT_SUPPORTED - default
###   1: NORMALIZED_QUANTITY_STORAGE_SUPPORTED
###   2: NORMALIZED_QUANTITY_SEARCH_SUPPORTED
#    normalized_quantity_search_level: 2
#elasticsearch:
#  debug:
#    pretty_print_json_log: false
#    refresh_after_write: false
#  enabled: false
#  password: SomePassword
#  required_index_status: YELLOW
#  rest_url: 'localhost:9200'
#  protocol: 'http'
#  schema_management_strategy: CREATE
#  username: SomeUsername