From af6ba20835940adb2929f8cfd5cab9a6f8b7291c Mon Sep 17 00:00:00 2001
From: Tim Poterba <tpoterba@gmail.com>
Date: Fri, 23 Sep 2022 13:38:51 -0400
Subject: [PATCH] [query] Log FASTA downloads (#12217)

---
 hail/src/main/scala/is/hail/io/reference/FASTAReader.scala | 1 +
 1 file changed, 1 insertion(+)

diff --git a/hail/src/main/scala/is/hail/io/reference/FASTAReader.scala b/hail/src/main/scala/is/hail/io/reference/FASTAReader.scala
index 02cd2a2dc8b..7f4ac39d5ec 100644
--- a/hail/src/main/scala/is/hail/io/reference/FASTAReader.scala
+++ b/hail/src/main/scala/is/hail/io/reference/FASTAReader.scala
@@ -38,6 +38,7 @@ object FASTAReader {
 
   def setup(tmpdir: String, fs: FS, fastaFile: String, indexFile: String): String = {
     val localFastaFile = ExecuteContext.createTmpPathNoCleanup(tmpdir, "fasta-reader", "fasta")
+    log.info(s"copying FASTA file at $fastaFile to $localFastaFile")
     fs.copyRecode(fastaFile, localFastaFile)
 
     val localIndexFile = localFastaFile + ".fai"