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Slice shape issue on page /20_image_segmentation/Segmentation_3D.html #38

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ClementCaporal opened this issue Jun 26, 2023 · 0 comments

ClementCaporal commented Jun 26, 2023 •

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Hello ,

Thank you for your work. There is always a notebook for what I am looking for!

In this notebook : https://haesleinhuepf.github.io/BioImageAnalysisNotebooks/20_image_segmentation/Segmentation_3D.html
In the section intensity and background correction I think the slice should be

a_slice = cle.create([resampled.shape[1], resampled.shape[2]])

With the example data the change is not obvious but with less cubic data I think it will crop part of the image

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