From e8624bea049308bc4c9fbd1a1e787b195434ba54 Mon Sep 17 00:00:00 2001 From: Alexey Girin Date: Sun, 14 Jul 2024 11:55:38 +0300 Subject: [PATCH 1/5] 5041 - Autotests: Side chain connections --- .../Snake-Mode/side-chain-connections.spec.ts | 790 ++ ...s-are-in-the-same-row-1-chromium-linux.png | Bin 0 -> 24510 bytes ...s-are-in-the-same-row-1-chromium-linux.png | Bin 0 -> 56323 bytes ...s-are-in-the-same-row-1-chromium-linux.png | Bin 0 -> 56078 bytes ...s-are-in-the-same-row-1-chromium-linux.png | Bin 0 -> 55097 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 49391 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 56316 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 55735 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 56316 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 55735 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 55735 bytes ...are-in-different-rows-1-chromium-linux.png | Bin 0 -> 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.../KET/Side-Chain-Connections/2.3.ket | 6821 ++++++++++++ .../KET/Side-Chain-Connections/2.4.ket | 7316 +++++++++++++ .../KET/Side-Chain-Connections/2.5.ket | 6821 ++++++++++++ .../KET/Side-Chain-Connections/2.6.ket | 7792 ++++++++++++++ .../KET/Side-Chain-Connections/2.7.ket | 7792 ++++++++++++++ .../KET/Side-Chain-Connections/3.1.ket | 7304 +++++++++++++ .../KET/Side-Chain-Connections/3.2.ket | 7460 +++++++++++++ .../KET/Side-Chain-Connections/3.3.ket | 7485 +++++++++++++ .../KET/Side-Chain-Connections/3.4.ket | 7969 ++++++++++++++ .../KET/Side-Chain-Connections/3.5.ket | 7379 +++++++++++++ .../KET/Side-Chain-Connections/3.6.ket | 7386 +++++++++++++ .../KET/Side-Chain-Connections/3.7.ket | 8870 +++++++++++++++ .../KET/Side-Chain-Connections/4.1.ket | 7304 +++++++++++++ .../KET/Side-Chain-Connections/4.2.ket | 7460 +++++++++++++ .../KET/Side-Chain-Connections/4.3.ket | 7485 +++++++++++++ .../KET/Side-Chain-Connections/4.4.ket | 7969 ++++++++++++++ .../KET/Side-Chain-Connections/4.5.ket | 7379 +++++++++++++ .../KET/Side-Chain-Connections/4.6.ket | 7386 +++++++++++++ .../KET/Side-Chain-Connections/4.7.ket | 8870 +++++++++++++++ .../KET/Side-Chain-Connections/5.ket | 6908 ++++++++++++ .../KET/Side-Chain-Connections/6.1.ket | 8816 +++++++++++++++ .../KET/Side-Chain-Connections/6.2.ket | 9520 +++++++++++++++++ .../KET/Side-Chain-Connections/6.ket | 9355 ++++++++++++++++ .../KET/Side-Chain-Connections/7.1.ket | 1425 +++ .../KET/Side-Chain-Connections/7.2.ket | 1425 +++ .../KET/Side-Chain-Connections/7.3.ket | 1425 +++ .../KET/Side-Chain-Connections/7.4.ket | 1425 +++ .../KET/Side-Chain-Connections/7.5.ket | 1425 +++ 69 files changed, 232065 insertions(+) create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-1-Verify-correct-disp-45eca-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-2-Verify-correct-disp-60c14-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-3-Verify-correct-disp-c2885-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-4-Verify-correct-disp-b18bd-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-1-Verify-correct-disp-32da4-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-2-Verify-correct-disp-31f6f-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-3-Verify-correct-disp-bd45d-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-4-Verify-correct-disp-76318-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-5-Verify-correct-disp-7e784-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-6-Verify-correct-disp-e6655-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-2-7-Verify-correct-disp-73a7e-tions-when-two-monomers-are-in-different-rows-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-1-Check-that-R1-R1-co-d7e9c--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-2-Check-that-R1-R1-co-3957c--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-3-Check-that-R1-R1-co-4d434--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-4-Check-that-R1-R1-co-776e9--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-5-Check-that-R1-R1-co-3d488--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-6-Check-that-R1-R1-co-de973--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-3-7-Check-that-R1-R1-co-41e6d--first-positions-in-different-backbone-chains-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-1-In-case-of-R2-R2-bo-c940d-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-2-In-case-of-R2-R2-bo-683d8-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-3-In-case-of-R2-R2-bo-24541-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-4-In-case-of-R2-R2-bo-d3b21-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-5-In-case-of-R2-R2-bo-4d20e-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-6-In-case-of-R2-R2-bo-e0bc0-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-4-7-In-case-of-R2-R2-bo-7200b-uld-be-drawn-on-the-right-from-these-monomers-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-5-Verify-side-chain-co-ac201-ignment-and-avoidance-of-overlap-horizontal-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-6-1-Verify-side-chain-c-1d735-alignment-and-avoidance-of-overlap-vertical-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-6-2-Verify-side-chain-c-66313-alignment-and-avoidance-of-overlap-vertical-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-6-Verify-side-chain-co-36145-alignment-and-avoidance-of-overlap-vertical-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-7-1-Verify-handling-of--5d122--be-displayed-as-a-straight-line-usual-way-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-7-2-Verify-handling-of--3d292--be-displayed-as-a-straight-line-usual-way-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-7-3-Verify-handling-of--6a614--be-displayed-as-a-straight-line-usual-way-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-7-4-Verify-handling-of--5f057--be-displayed-as-a-straight-line-usual-way-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-7-5-Verify-handling-of--d3b6c--be-displayed-as-a-straight-line-usual-way-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.3.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.4.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.3.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.4.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.5.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.6.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.7.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.3.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.4.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.5.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.6.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/3.7.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.3.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.4.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.5.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.6.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.7.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/5.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.1.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.2.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.3.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.4.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.5.ket diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts index 8d0e1af9cd..837e1c62ba 100755 --- a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts +++ b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts @@ -52,4 +52,794 @@ test.describe('Side chain connections', () => { await moveMouseAway(page); await takeEditorScreenshot(page); }); + + test('1.1 Verify correct display of side-chain connections when two monomers are in the same row', async ({ + page, + }) => { + /* + /* Case 1.1: Verify correct display of side-chain connections when two monomers are in the same row + /* (connection should be drawn horizontally above these monomers) + /* All canvases (4 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations horisontally. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/1.1.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('1.2 Verify correct display of side-chain connections when two monomers are in the same row', async ({ + page, + }) => { + /* + /* Case 1.2: Verify correct display of side-chain connections when two monomers are in the same row + /* (connection should be drawn horizontally above these monomers) + /* All canvases (4 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations horisontally. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/1.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('1.3 Verify correct display of side-chain connections when two monomers are in the same row', async ({ + page, + }) => { + /* + /* Case 1.3: Verify correct display of side-chain connections when two monomers are in the same row + /* (connection should be drawn horizontally above these monomers) + /* All canvases (4 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations horisontally. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/1.3.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('1.4 Verify correct display of side-chain connections when two monomers are in the same row', async ({ + page, + }) => { + /* + /* Case 1.4: Verify correct display of side-chain connections when two monomers are in the same row + /* (connection should be drawn horizontally above these monomers) + /* All canvases (4 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations horisontally. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/1.4.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.1 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.1: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.1.ket`, + page, + ); + await moveMouseAway(page); + // Zoom out to see whole picture + await page.keyboard.press('Control+Minus'); + await takeEditorScreenshot(page); + }); + + test('2.2 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.2: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.3 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.3: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.3.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.4 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.4: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.4.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.5 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.5: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.6 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.6: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('2.7 Verify correct display of side-chain connections when two monomers are in different rows', async ({ + page, + }) => { + /* + /* Case 2.7: Verify correct display of side-chain connections when two monomers are in different rows + /* (connection curve should go from topmost monomer upside down and left to right (or right to left) using free space between monomers) + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected by all possible combinations. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/2.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.1 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.1 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.1.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.2 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.2 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.3 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.3 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.3.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.4 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.4 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.4.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.5 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.5 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.6 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.6 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.6.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('3.7 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains', async ({ + page, + }) => { + /* + /* Case 3.7 Check that R1-R1 connection is established between two monomers occupying first positions in different backbone chains, + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the left. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5069 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/3.7.ket`, + page, + ); + await moveMouseAway(page); + // Zoom out to see bottom chians + await page.keyboard.press('Control+Minus'); + await takeEditorScreenshot(page); + }); + + test('4.1 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.1 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.1.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.2 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.2 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.3 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.3 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.3.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.4 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.4 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.4.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.5 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.5 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.6 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.6 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.6.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('4.7 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers', async ({ + page, + }) => { + /* + /* Case 4.7 In case of R2-R2 bond connecting the last monomers of the chains the connection should be drawn on the right from these monomers + /* connection drawn on the left from these monomers + /* + /* All canvases (7 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the right of each chain. + /* + /* IMPORTANT: Test results is incorrect now because we have bug https://github.com/epam/ketcher/issues/5070 + /* Screenshot should be updated after fix. + /* + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/4.7.ket`, + page, + ); + await moveMouseAway(page); + // Zoom out to see bottom chians + await page.keyboard.press('Control+Minus'); + await takeEditorScreenshot(page); + }); + + test('5. Verify side-chain connections alignment and avoidance of overlap (horizontal)', async ({ + page, + }) => { + /* + /* Case 5: Side chain connections may intersect backbone and other side chain connections but should not overlap. + /* If more than one side connection is drawn horizontally between two monomer rows, they should be shifted vertically against each other. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro(`KET/Side-Chain-Connections/5.ket`, page); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('6. Verify side-chain connections alignment and avoidance of overlap (vertical)', async ({ + page, + }) => { + /* + /* Case 6: Similarly to point 5, vertically oriented connections should not overlap. + /* If multiple connections run vertically in the space between two monomers, they should be shifted horizontally relative to each other. + /* + /* All canvases (3 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the vertically. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro(`KET/Side-Chain-Connections/6.ket`, page); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('6.1 Verify side-chain connections alignment and avoidance of overlap (vertical)', async ({ + page, + }) => { + /* + /* Case 6.1: Similarly to point 5, vertically oriented connections should not overlap. + /* If multiple connections run vertically in the space between two monomers, they should be shifted horizontally relative to each other. + /* + /* All canvases (3 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the vertically. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/6.1.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('6.2 Verify side-chain connections alignment and avoidance of overlap (vertical)', async ({ + page, + }) => { + /* + /* Case 6.2: Similarly to point 5, vertically oriented connections should not overlap. + /* If multiple connections run vertically in the space between two monomers, they should be shifted horizontally relative to each other. + /* + /* All canvases (3 in total) contain all combinations of all types on mnomers (except unresolved monomer because of bug) + /* connected from the vertically. + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/6.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('7.1 Verify handling of RNA monomer connections between R1 of base and R3 of sugar (should be displayed as a straight line (usual way))', async ({ + page, + }) => { + /* + /* Case 7.1: Specific case for RNA monomers: the bond between R1 of base and R3 of sugar should not be + /* considered side chain connection and should be displayed as a straight line (usual way). All other + /* bonds connected to the base are considered side chain connections. + /* + /* All canvases (5 in total) contain all combinations of connections between base and sugar + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/7.1.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('7.2 Verify handling of RNA monomer connections between R1 of base and R3 of sugar (should be displayed as a straight line (usual way))', async ({ + page, + }) => { + /* + /* Case 7.2: Specific case for RNA monomers: the bond between R1 of base and R3 of sugar should not be + /* considered side chain connection and should be displayed as a straight line (usual way). All other + /* bonds connected to the base are considered side chain connections. + /* + /* All canvases (5 in total) contain all combinations of connections between base and sugar + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/7.2.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('7.3 Verify handling of RNA monomer connections between R1 of base and R3 of sugar (should be displayed as a straight line (usual way))', async ({ + page, + }) => { + /* + /* Case 7.3: Specific case for RNA monomers: the bond between R1 of base and R3 of sugar should not be + /* considered side chain connection and should be displayed as a straight line (usual way). All other + /* bonds connected to the base are considered side chain connections. + /* + /* All canvases (5 in total) contain all combinations of connections between base and sugar + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/7.3.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('7.4 Verify handling of RNA monomer connections between R1 of base and R3 of sugar (should be displayed as a straight line (usual way))', async ({ + page, + }) => { + /* + /* Case 7.4: Specific case for RNA monomers: the bond between R1 of base and R3 of sugar should not be + /* considered side chain connection and should be displayed as a straight line (usual way). All other + /* bonds connected to the base are considered side chain connections. + /* + /* All canvases (5 in total) contain all combinations of connections between base and sugar + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/7.4.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('7.5 Verify handling of RNA monomer connections between R1 of base and R3 of sugar (should be displayed as a straight line (usual way))', async ({ + page, + }) => { + /* + /* Case 7.5: Specific case for RNA monomers: the bond between R1 of base and R3 of sugar should not be + /* considered side chain connection and should be displayed as a straight line (usual way). All other + /* bonds connected to the base are considered side chain connections. + /* + /* All canvases (5 in total) contain all combinations of connections between base and sugar + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/7.5.ket`, + page, + ); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); }); diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-1-Verify-correct-disp-45eca-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-1-Verify-correct-disp-45eca-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png new file mode 100644 index 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"monomer5680" + }, + { + "$ref": "monomer5681" + }, + { + "$ref": "monomer5682" + }, + { + "$ref": "monomer5683" + }, + { + "$ref": "monomer5684" + }, + { + "$ref": "monomer5685" + }, + { + "$ref": "monomer5686" + }, + { + "$ref": "monomer5687" + }, + { + "$ref": "monomer5688" + }, + { + "$ref": "monomer5689" + }, + { + "$ref": "monomer5690" + }, + { + "$ref": "monomer5691" + }, + { + "$ref": "monomer5692" + }, + { + "$ref": "monomer5693" + }, + { + "$ref": "monomer5694" + }, + { + "$ref": "monomer5695" + }, + { + "$ref": "monomer5696" + }, + { + "$ref": "monomer5697" + }, + { + "$ref": "monomer5698" + }, + { + "$ref": "monomer5699" + }, + { + "$ref": "monomer5700" + }, + { + "$ref": "monomer5701" + }, + { + "$ref": "monomer5702" + }, + { + "$ref": "monomer5703" + }, + { + "$ref": "monomer5704" + }, + { + "$ref": "monomer5705" + }, + { + "$ref": "monomer5706" + }, + { + "$ref": "monomer5707" + }, + { + "$ref": "monomer5708" + }, + { + "$ref": "monomer5709" + }, + { + "$ref": "monomer5710" + }, + { + "$ref": "monomer5711" + }, + { + "$ref": "monomer5712" + }, + { + "$ref": "monomer5713" + }, + { + "$ref": "monomer5714" + }, + { + "$ref": "monomer5715" + }, + { + "$ref": "monomer5716" + }, + { + "$ref": "monomer5717" + }, + { + "$ref": "monomer5718" + }, + { + "$ref": "monomer5719" + }, + { + "$ref": "monomer5720" + }, + { + "$ref": "monomer5721" + }, + { + "$ref": "monomer5722" + }, + { + "$ref": "monomer5723" + }, + { + "$ref": "monomer5724" + }, + { + "$ref": "monomer5725" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5646", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5641", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5646", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5651", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5651", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5656", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5656", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5661", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5647", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5642", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5647", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5652", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5648", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5653", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5648", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5643", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5658", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5653", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5658", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5663", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5657", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5662", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5657", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5652", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5644", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5649", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5649", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5654", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5654", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5659", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5650", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5655", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5650", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5645", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5655", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5660", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5660", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5665", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5659", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5664", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5670", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5665", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5669", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5664", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5668", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer5663", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5661", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5666", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5666", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5671", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5671", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5676", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5676", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5681", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5681", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5686", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5662", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5667", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5667", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5672", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5672", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5677", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5677", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5682", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5668", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5673", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5669", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5674", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5670", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5675", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5673", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5678", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5674", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5679", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5675", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5680", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5680", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5685", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5679", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5684", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5678", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5683", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5683", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5688", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5684", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5689", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5685", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5690", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5690", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5695", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5695", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5700", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5700", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5705", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5705", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5710", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5689", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5694", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5694", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5699", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5699", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5704", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5704", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5709", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5688", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5693", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5693", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5698", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5698", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5703", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5682", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5687", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5687", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5692", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5686", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5691", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5691", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5696", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5696", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5701", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5701", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5706", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5697", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5702", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5692", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5697", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5702", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5707", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5703", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5708", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5706", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5711", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5712", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5717", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5707", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5712", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5711", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5716", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5716", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5721", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5717", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5722", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5718", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5723", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5713", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5718", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5708", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5713", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5709", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5714", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5714", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5719", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer5719", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer5724", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": 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43.30449694824219 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer5725": { + "type": "monomer", + "id": "5725", + "position": { + "x": 27, + "y": 41.79199694824219 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.2.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.2.ket new file mode 100644 index 0000000000..af5066d553 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.2.ket @@ -0,0 +1,8202 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer6226" + }, + { + "$ref": "monomer6227" + }, + { + "$ref": "monomer6228" + }, + { + "$ref": "monomer6229" + }, + { + "$ref": "monomer6230" + }, + { + "$ref": "monomer6231" + }, + { + "$ref": "monomer6232" + }, + { + "$ref": "monomer6233" + }, + { + "$ref": "monomer6234" + }, + { + "$ref": "monomer6235" + }, + { + "$ref": "monomer6236" + }, + { + "$ref": "monomer6237" + }, + { + "$ref": "monomer6238" + }, + { + "$ref": "monomer6239" + }, + { + "$ref": "monomer6240" + }, + { + "$ref": "monomer6241" + }, + { + "$ref": "monomer6242" + }, + { + "$ref": "monomer6243" + }, + { + "$ref": "monomer6244" + }, + { + "$ref": "monomer6245" + }, + { + "$ref": "monomer6246" + }, + { + "$ref": "monomer6247" + }, + { + "$ref": "monomer6248" + }, + { + "$ref": "monomer6249" + }, + { + "$ref": "monomer6250" + }, + { + "$ref": "monomer6251" + }, + { + "$ref": "monomer6252" + }, + { + "$ref": "monomer6253" + }, + { + "$ref": "monomer6254" + }, + { + "$ref": "monomer6255" + }, + { + "$ref": "monomer6256" + }, + { + "$ref": "monomer6257" + }, + { + "$ref": "monomer6258" + }, + { + "$ref": "monomer6259" + }, + { + "$ref": "monomer6260" + }, + { + "$ref": "monomer6261" + }, + { + "$ref": "monomer6262" + }, + { + "$ref": "monomer6263" + }, + { + "$ref": "monomer6264" + }, + { + "$ref": "monomer6265" + }, + { + "$ref": 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"templateId": "2Abz___2-Aminobenzoic acid" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.3.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.3.ket new file mode 100644 index 0000000000..a1971a1df3 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/1.3.ket @@ -0,0 +1,8202 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer7006" + }, + { + "$ref": "monomer7007" + }, + { + "$ref": "monomer7008" + }, + { + "$ref": "monomer7009" + }, + { + "$ref": "monomer7010" + }, + { + "$ref": "monomer7011" + }, + { + "$ref": "monomer7012" + }, + { + "$ref": "monomer7013" + }, + { + "$ref": "monomer7014" + }, + { + "$ref": "monomer7015" + }, + { + "$ref": "monomer7016" + }, + { + "$ref": "monomer7017" + }, + { + "$ref": "monomer7018" + }, + { + "$ref": "monomer7019" + }, + { + "$ref": "monomer7020" + }, + { + "$ref": "monomer7021" + }, + { + "$ref": "monomer7022" + }, + { + "$ref": 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"attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2751", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2731", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2759", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2732", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2767", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2733", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2775", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2734", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2755", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2726", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2763", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2727", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2771", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2728", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2779", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2729", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2779", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2739", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2771", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2738", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2763", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2737", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2755", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2736", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2754", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2736", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2762", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2737", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2770", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2738", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2778", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2739", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2778", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2724", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2770", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2723", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2762", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2722", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2754", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2721", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2753", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2721", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2761", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2722", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2769", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2723", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2777", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2724", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2777", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2719", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2769", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2718", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2761", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2717", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2753", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2716", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2745", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2715", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2744", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2715", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2752", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2716", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2760", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2717", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2768", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2718", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2776", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2719", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2734", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2776", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2733", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2768", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2732", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2760", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2731", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2752", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2730", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2744", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2742", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2710", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2710", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2743", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2705", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2742", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2705", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2741", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2695", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2740", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2740", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2700", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2700", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2741", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2696", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2748", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2748", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2701", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2701", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2749", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2749", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2706", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2706", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2750", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2750", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2711", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2711", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2751", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2712", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2759", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2713", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2767", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2758", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2712", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2707", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2758", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2766", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2713", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2708", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2766", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2765", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2708", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2757", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2707", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2702", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2757", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2756", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2702", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2697", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2756", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2698", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2764", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2764", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2703", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2703", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2765", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2699", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2772", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2772", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2704", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2704", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2773", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2773", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2709", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2709", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2774", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2774", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2714", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2714", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2775", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2725", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2780", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2780", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2785", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2726", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2781", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2781", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2786", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2727", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2782", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2782", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2787", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2788", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2783", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2728", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2783", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2729", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2784", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2784", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2789", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2806", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2796", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2806", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2798", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2805", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2798", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2805", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2795", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2804", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2795", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2802", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2797", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2804", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2794", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2803", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2794", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2797", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2803", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2801", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2793", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2793", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2802", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2792", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2801", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2792", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer2800", + "attachmentPointId": "R2" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2790", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2799", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2799", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2791", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2791", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2800", + 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"E___Glutamic acid" + }, + "monomer4395": { + "type": "monomer", + "id": "4395", + "position": { + "x": 22.25, + "y": -11.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer4396": { + "type": "monomer", + "id": "4396", + "position": { + "x": 23.75, + "y": -11.75 + }, + "alias": "E", + "templateId": "E___Glutamic acid" + }, + "monomer4397": { + "type": "monomer", + "id": "4397", + "position": { + "x": 25.25, + "y": -11.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4398": { + "type": "monomer", + "id": "4398", + "position": { + "x": 1.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer4399": { + "type": "monomer", + "id": "4399", + "position": { + "x": 2.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4400": { + "type": "monomer", + "id": "4400", + "position": { + "x": 4.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4401": { + "type": "monomer", + "id": "4401", + "position": { + "x": 5.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4402": { + "type": "monomer", + "id": "4402", + "position": { + "x": 7.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4403": { + "type": "monomer", + "id": "4403", + "position": { + "x": 8.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4404": { + "type": "monomer", + "id": "4404", + "position": { + "x": 10.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4405": { + "type": "monomer", + "id": "4405", + "position": { + "x": 11.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4406": { + "type": "monomer", + "id": "4406", + "position": { + "x": 13.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer4407": { + "type": "monomer", + "id": "4407", + "position": { + "x": 14.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4408": { + "type": "monomer", + "id": "4408", + "position": { + "x": 16.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4409": { + "type": "monomer", + "id": "4409", + "position": { + "x": 17.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4410": { + "type": "monomer", + "id": "4410", + "position": { + "x": 19.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer4411": { + "type": "monomer", + "id": "4411", + "position": { + "x": 20.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4412": { + "type": "monomer", + "id": "4412", + "position": { + "x": 22.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer4413": { + "type": "monomer", + "id": "4413", + "position": { + "x": 23.75, + "y": -14.75 + }, + "alias": "F", + "templateId": "F___Phenylalanine" + }, + "monomer4414": { + "type": "monomer", + "id": "4414", + "position": { + "x": 25.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.7.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.7.ket new file mode 100644 index 0000000000..99d80a37b5 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/2.7.ket @@ -0,0 +1,7792 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer42308" + }, + { + "$ref": "monomer42309" + }, + { + "$ref": "monomer42310" + }, + { + "$ref": "monomer42311" + }, + { + "$ref": "monomer42312" + }, + { + "$ref": "monomer42313" + }, + { + "$ref": "monomer42314" + }, + { + "$ref": "monomer42315" + }, + { + "$ref": "monomer42316" + }, + { + "$ref": "monomer42317" + }, + { + "$ref": "monomer42318" + }, + { + "$ref": "monomer42319" + }, + { + "$ref": "monomer42320" + }, + { + "$ref": "monomer42321" + }, + { + "$ref": "monomer42322" + }, + { + "$ref": "monomer42323" + }, + { + "$ref": "monomer42324" + }, + { + "$ref": "monomer42325" + }, + { + "$ref": "monomer42326" + }, + { + "$ref": "monomer42327" + }, + { + "$ref": "monomer42328" + }, + { + "$ref": "monomer42329" + }, + { + "$ref": "monomer42330" + }, + { + "$ref": "monomer42331" + }, + { + "$ref": "monomer42332" + }, + { + "$ref": "monomer42333" + }, + { + "$ref": "monomer42334" + }, + { + "$ref": "monomer42335" + }, + { + "$ref": "monomer42336" + }, + { + "$ref": "monomer42337" + }, + { + "$ref": "monomer42338" + }, + { + "$ref": "monomer42339" + }, + { + "$ref": "monomer42340" 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"R2" + }, + "endpoint2": { + "monomerId": "monomer12211", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12212", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12213", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12213", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12214", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12214", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12215", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12216", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12217", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12215", + "attachmentPointId": 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"R2" + }, + "endpoint2": { + "monomerId": "monomer12212", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12219", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12220", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12220", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12221", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12221", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12222", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12222", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12223", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12223", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12224", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12224", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12225", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12225", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12226", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12226", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12227", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12227", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12228", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12228", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12229", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12229", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12230", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12218", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12219", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12231", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12232", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12232", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12233", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12233", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12234", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12234", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12235", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12235", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12236", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12230", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12231", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12238", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12239", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12239", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12240", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12240", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12241", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12241", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12242", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12242", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12243", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12243", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12244", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12244", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12245", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12245", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12246", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12246", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12247", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12247", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12248", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12248", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12249", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12237", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12238", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12250", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12251", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12251", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12252", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12252", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12253", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12253", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12254", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12254", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12255", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12249", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12250", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12257", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12258", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12258", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12259", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12259", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12260", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12260", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12261", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12261", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12262", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12262", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12263", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12263", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12264", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12264", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12265", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12265", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12266", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12266", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12267", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12267", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12268", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12256", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12257", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12269", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12270", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12270", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12271", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12271", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12272", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12272", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12273", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12273", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12274", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12268", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12269", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12276", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12277", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12277", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12278", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12278", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12279", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12279", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12280", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12280", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12281", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12281", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12282", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12282", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12283", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12283", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12284", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12284", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12285", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12285", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12286", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12286", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12287", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12275", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12276", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12288", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12289", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12289", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12290", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12290", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12291", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12291", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12292", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12292", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12293", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12287", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12288", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12295", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12296", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12296", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12297", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12297", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12298", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12298", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12299", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12299", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12300", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12300", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12301", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12301", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12302", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12302", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12303", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12303", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12304", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12304", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12305", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12305", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12306", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12294", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12295", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12307", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12308", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12308", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12309", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12309", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12310", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12310", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12311", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12311", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12312", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12306", + "attachmentPointId": 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"endpoint1": { + "monomerId": "monomer12880", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12881", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12882", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12883", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12883", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12884", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12884", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12885", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12877", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12878", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12881", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12882", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12886", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12887", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12887", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12888", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12888", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12889", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12890", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12891", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12889", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12890", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12885", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12886", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12893", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12894", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12894", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12895", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12895", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12896", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12896", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12897", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12897", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12898", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12898", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12899", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12899", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12900", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12900", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12901", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12901", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12902", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12902", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12903", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12903", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12904", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12892", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12893", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12905", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12906", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12906", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12907", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12907", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12908", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12908", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12909", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12909", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12910", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12904", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12905", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12892", + "attachmentPointId": "R1" + }, + "endpoint2": { + "monomerId": "monomer12873", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12914", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12915", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12915", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12916", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12916", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12917", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12917", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12918", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12918", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12919", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12919", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12920", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12920", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12921", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12921", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12922", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12922", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12923", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12923", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12924", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12924", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12925", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12926", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12927", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12938", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12939", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12927", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12928", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12928", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12929", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12929", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12930", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12930", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12931", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12931", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12932", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12932", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12933", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12933", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12934", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12934", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12935", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12935", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12936", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12936", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12937", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12939", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12940", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12940", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12941", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12941", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12942", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12942", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12943", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12943", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12944", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12944", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12945", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12945", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12946", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12946", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12947", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12947", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12948", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12948", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12949", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12911", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12914", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12912", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12926", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12913", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12938", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12950", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12951", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12951", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12952", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12952", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12953", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + 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"endpoint1": { + "monomerId": "monomer12965", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12966", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12966", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12967", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12925", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12950", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12937", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12956", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer12949", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer12962", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + 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"attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13634", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13635", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13635", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13636", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13628", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13629", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13632", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13633", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13637", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13638", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13638", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13639", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13639", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13640", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13623", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13637", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13641", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13642", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13642", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13643", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13643", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13644", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13645", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13646", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13646", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13647", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13647", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13648", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13640", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13641", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13644", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13645", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13649", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13650", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13650", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13651", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13651", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13652", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13653", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13654", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13652", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13653", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13655", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13656", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13656", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13657", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13657", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13658", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13659", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13660", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13658", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13659", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13636", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13649", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13648", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13655", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13663", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13664", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13664", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13665", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13665", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13666", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13666", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13667", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13667", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13668", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13668", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13669", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13669", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13670", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13670", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13671", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13671", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13672", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13672", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13673", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13673", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13674", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13675", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13676", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13676", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13677", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13677", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13678", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13678", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13679", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13679", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13680", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13680", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13681", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13681", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13682", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13682", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13683", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13683", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13684", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13684", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13685", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13685", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13686", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13661", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13663", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13662", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13675", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13687", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13688", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13688", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13689", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13689", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13690", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13690", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13691", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13691", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13692", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13693", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13694", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13694", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13695", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13695", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13696", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13696", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13697", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13697", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13698", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13674", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13687", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13686", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13693", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13700", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13701", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13701", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13702", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13702", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13703", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13703", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13704", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13704", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13705", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13705", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13706", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13706", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13707", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13707", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13708", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13708", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13709", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13709", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13710", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13710", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13711", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13699", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13700", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13712", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13713", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13713", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13714", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13714", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13715", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13715", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13716", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13716", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13717", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13711", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13712", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13719", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13720", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13720", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13721", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13721", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13722", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13722", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13723", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13723", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13724", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13724", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13725", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13725", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13726", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13726", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13727", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13727", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13728", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13728", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13729", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13729", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13730", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13718", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13719", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer13731", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer13732", + 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"monomer15163" + }, + { + "$ref": "monomer15164" + }, + { + "$ref": "monomer15165" + }, + { + "$ref": "monomer15166" + }, + { + "$ref": "monomer15167" + }, + { + "$ref": "monomer15168" + }, + { + "$ref": "monomer15169" + }, + { + "$ref": "monomer15170" + }, + { + "$ref": "monomer15171" + }, + { + "$ref": "monomer15172" + }, + { + "$ref": "monomer15173" + }, + { + "$ref": "monomer15174" + }, + { + "$ref": "monomer15175" + }, + { + "$ref": "monomer15176" + }, + { + "$ref": "monomer15177" + }, + { + "$ref": "monomer15178" + }, + { + "$ref": "monomer15179" + }, + { + "$ref": "monomer15180" + }, + { + "$ref": "monomer15181" + }, + { + "$ref": "monomer15182" + }, + { + "$ref": "monomer15183" + }, + { + "$ref": "monomer15184" + }, + { + "$ref": "monomer15185" + }, + { + "$ref": "monomer15186" + }, + { + "$ref": "monomer15187" + }, + { + "$ref": "monomer15188" + }, + { + "$ref": "monomer15189" + }, + { + "$ref": "monomer15190" + }, + { + "$ref": "monomer15191" + }, + { + "$ref": "monomer15192" + }, + { + "$ref": "monomer15193" + }, + { + "$ref": "monomer15194" + }, + { + "$ref": "monomer15195" + }, + { + "$ref": "monomer15196" + }, + { + "$ref": "monomer15197" + }, + { + "$ref": "monomer15198" + }, + { + "$ref": "monomer15199" + }, + { + "$ref": "monomer15200" + }, + { + "$ref": "monomer15201" + }, + { + "$ref": "monomer15202" + }, + { + "$ref": "monomer15203" + }, + { + "$ref": "monomer15204" + }, + { + "$ref": "monomer15205" + }, + { + "$ref": "monomer15206" + }, + { + "$ref": "monomer15207" + }, + { + "$ref": "monomer15208" + }, + { + "$ref": "monomer15209" + }, + { + "$ref": "monomer15210" + }, + { + "$ref": "monomer15211" + }, + { + "$ref": "monomer15212" + }, + { + "$ref": "monomer15213" + }, + { + "$ref": "monomer15214" + }, + { + "$ref": "monomer15215" + }, + { + "$ref": "monomer15216" + }, + { + "$ref": "monomer15217" + }, + { + "$ref": "monomer15218" + }, + { + "$ref": "monomer15219" + }, + { + "$ref": "monomer15220" + }, + { + "$ref": "monomer15221" + }, + { + "$ref": "monomer15222" + }, + { + "$ref": "monomer15223" + }, + { + "$ref": "monomer15224" + }, + { + "$ref": "monomer15225" + }, + { + "$ref": "monomer15226" + }, + { + "$ref": "monomer15227" + }, + { + "$ref": "monomer15228" + }, + { + "$ref": "monomer15229" + }, + { + "$ref": "monomer15230" + }, + { + "$ref": "monomer15231" + }, + { + "$ref": "monomer15232" + }, + { + "$ref": "monomer15233" + }, + { + "$ref": "monomer15234" + }, + { + "$ref": "monomer15235" + }, + { + "$ref": "monomer15236" + }, + { + "$ref": "monomer15237" + }, + { + "$ref": "monomer15238" + }, + { + "$ref": "monomer15239" + }, + { + "$ref": "monomer15240" + }, + { + "$ref": "monomer15241" + }, + { + "$ref": "monomer15242" + }, + { + "$ref": "monomer15243" + }, + { + "$ref": "monomer15244" + }, + { + "$ref": "monomer15245" + }, + { + "$ref": "monomer15246" + }, + { + "$ref": "monomer15247" + }, + { + "$ref": "monomer15248" + }, + { + "$ref": "monomer15249" + }, + { + "$ref": "monomer15250" + }, + { + "$ref": "monomer15251" + }, + { + "$ref": "monomer15252" + }, + { + "$ref": "monomer15253" + }, + { + "$ref": "monomer15254" + }, + { + "$ref": "monomer15255" + }, + { + "$ref": "monomer15256" + }, + { + "$ref": "monomer15257" + }, + { + "$ref": "monomer15258" + }, + { + "$ref": "monomer15259" + }, + { + "$ref": "monomer15260" + }, + { + "$ref": "monomer15261" + }, + { + "$ref": "monomer15262" + }, + { + "$ref": "monomer15263" + }, + { + "$ref": "monomer15264" + }, + { + "$ref": "monomer15265" + }, + { + "$ref": "monomer15266" + }, + { + "$ref": "monomer15267" + }, + { + "$ref": "monomer15268" + }, + { + "$ref": "monomer15269" + }, + { + "$ref": "monomer15270" + }, + { + "$ref": "monomer15271" + }, + { + "$ref": "monomer15272" + }, + { + "$ref": "monomer15273" + }, + { + "$ref": "monomer15274" + }, + { + "$ref": "monomer15275" + }, + { + "$ref": "monomer15276" + }, + { + "$ref": "monomer15277" + }, + { + "$ref": "monomer15278" + }, + { + "$ref": "monomer15279" + }, + { + "$ref": "monomer15280" + }, + { + "$ref": "monomer15281" + }, + { + "$ref": "monomer15282" + }, + { + "$ref": "monomer15283" + }, + { + "$ref": "monomer15284" + }, + { + "$ref": "monomer15285" + }, + { + "$ref": "monomer15286" + }, + { + "$ref": "monomer15287" + }, + { + "$ref": "monomer15288" + }, + { + "$ref": "monomer15289" + }, + { + "$ref": "monomer15290" + }, + { + "$ref": "monomer15291" + }, + { + "$ref": "monomer15292" + }, + { + "$ref": "monomer15293" + }, + { + "$ref": "monomer15294" + }, + { + "$ref": "monomer15295" + }, + { + "$ref": "monomer15296" + }, + { + "$ref": "monomer15297" + }, + { + "$ref": "monomer15298" + }, + { + "$ref": "monomer15299" + }, + { + "$ref": "monomer15300" + }, + { + "$ref": "monomer15301" + }, + { + "$ref": "monomer15302" + }, + { + "$ref": "monomer15303" + }, + { + "$ref": "monomer15304" + }, + { + "$ref": "monomer15305" + }, + { + "$ref": "monomer15306" + }, + { + "$ref": "monomer15307" + }, + { + "$ref": "monomer15308" + }, + { + "$ref": "monomer15309" + }, + { + "$ref": "monomer15310" + }, + { + "$ref": "monomer15311" + }, + { + "$ref": "monomer15312" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15127", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15128", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15139", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15140", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15128", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15129", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15129", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15130", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15130", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15131", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15131", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15132", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15132", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15133", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15133", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15134", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15134", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15135", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15135", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15136", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15136", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15137", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15137", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15138", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15140", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15141", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15141", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15142", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15142", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15143", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15143", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15144", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15144", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15145", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15145", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15146", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15146", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15147", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15147", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15148", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15148", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15149", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15149", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15150", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15124", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15127", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15125", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15139", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15126", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15151", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15151", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15152", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15152", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15153", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15153", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15154", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15155", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15156", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15156", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15157", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15157", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15158", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15159", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15160", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15160", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15161", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15161", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15162", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15154", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15155", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15158", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15159", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15163", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15164", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15164", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15165", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15165", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15166", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15123", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15163", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15167", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15168", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15168", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15169", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15169", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15170", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15171", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15172", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15172", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15173", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15173", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15174", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15166", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15167", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15170", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15171", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15175", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15176", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15181", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15182", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15176", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15177", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15177", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15178", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15178", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15179", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15179", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15180", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15182", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15183", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15183", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15184", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15184", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15185", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15185", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15186", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15187", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15188", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15188", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15189", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15189", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15190", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15191", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15192", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15190", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15191", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15193", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15194", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15194", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15195", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15195", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15196", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15197", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15198", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15196", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15197", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15138", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer15175", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer15150", 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"$ref": "monomer48886" + }, + { + "$ref": "monomer48887" + }, + { + "$ref": "monomer48888" + }, + { + "$ref": "monomer48889" + }, + { + "$ref": "monomer48890" + }, + { + "$ref": "monomer48891" + }, + { + "$ref": "monomer48892" + }, + { + "$ref": "monomer48893" + }, + { + "$ref": "monomer48894" + }, + { + "$ref": "monomer48895" + }, + { + "$ref": "monomer48896" + }, + { + "$ref": "monomer48897" + }, + { + "$ref": "monomer48898" + }, + { + "$ref": "monomer48899" + }, + { + "$ref": "monomer48900" + }, + { + "$ref": "monomer48901" + }, + { + "$ref": "monomer48902" + }, + { + "$ref": "monomer48903" + }, + { + "$ref": "monomer48904" + }, + { + "$ref": "monomer48905" + }, + { + "$ref": "monomer48906" + }, + { + "$ref": "monomer48907" + }, + { + "$ref": "monomer48908" + }, + { + "$ref": "monomer48909" + }, + { + "$ref": "monomer48910" + }, + { + "$ref": "monomer48911" + }, + { + "$ref": "monomer48912" + }, + { + "$ref": "monomer48913" + }, + { + "$ref": "monomer48920" + }, + { + "$ref": 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"$ref": "monomer49610" + }, + { + "$ref": "monomer49611" + }, + { + "$ref": "monomer49618" + }, + { + "$ref": "monomer49619" + }, + { + "$ref": "monomer49620" + }, + { + "$ref": "monomer49621" + }, + { + "$ref": "monomer49622" + }, + { + "$ref": "monomer49623" + }, + { + "$ref": "monomer49624" + }, + { + "$ref": "monomer49625" + }, + { + "$ref": "monomer49626" + }, + { + "$ref": "monomer49627" + }, + { + "$ref": "monomer49628" + }, + { + "$ref": "monomer49629" + }, + { + "$ref": "monomer49630" + }, + { + "$ref": "monomer49631" + }, + { + "$ref": "monomer49632" + }, + { + "$ref": "monomer49633" + }, + { + "$ref": "monomer49634" + }, + { + "$ref": "monomer49635" + }, + { + "$ref": "monomer49636" + }, + { + "$ref": "monomer49643" + }, + { + "$ref": "monomer49644" + }, + { + "$ref": "monomer49645" + }, + { + "$ref": "monomer49646" + }, + { + "$ref": "monomer49647" + }, + { + "$ref": "monomer49648" + }, + { + "$ref": "monomer49649" + }, + { + "$ref": "monomer49650" + }, + { + "$ref": "monomer49651" + }, + { + "$ref": "monomer49652" + }, + { + "$ref": "monomer49653" + }, + { + "$ref": "monomer49654" + }, + { + "$ref": "monomer49655" + }, + { + "$ref": "monomer49656" + }, + { + "$ref": "monomer49657" + }, + { + "$ref": "monomer49658" + }, + { + "$ref": "monomer49659" + }, + { + "$ref": "monomer49660" + }, + { + "$ref": "monomer49661" + }, + { + "$ref": "monomer49668" + }, + { + "$ref": "monomer49669" + }, + { + "$ref": "monomer49670" + }, + { + "$ref": "monomer49671" + }, + { + "$ref": "monomer49672" + }, + { + "$ref": "monomer49673" + }, + { + "$ref": "monomer49674" + }, + { + "$ref": "monomer49675" + }, + { + "$ref": "monomer49676" + }, + { + "$ref": "monomer49677" + }, + { + "$ref": "monomer49678" + }, + { + "$ref": "monomer49679" + }, + { + "$ref": "monomer49680" + }, + { + "$ref": "monomer49681" + }, + { + "$ref": "monomer49682" + }, + { + "$ref": "monomer49683" + }, + { + "$ref": "monomer49684" + }, + { + "$ref": "monomer49685" + }, + { + "$ref": "monomer49686" + }, + { + "$ref": "monomer49693" + }, + { + "$ref": "monomer49694" + }, + { + "$ref": "monomer49695" + }, + { + "$ref": "monomer49696" + }, + { + "$ref": "monomer49697" + }, + { + "$ref": "monomer49698" + }, + { + "$ref": "monomer49699" + }, + { + "$ref": "monomer49700" + }, + { + "$ref": "monomer49701" + }, + { + "$ref": "monomer49702" + }, + { + "$ref": "monomer49703" + }, + { + "$ref": "monomer49704" + }, + { + "$ref": "monomer49705" + }, + { + "$ref": "monomer49706" + }, + { + "$ref": "monomer49707" + }, + { + "$ref": "monomer49708" + }, + { + "$ref": "monomer49709" + }, + { + "$ref": "monomer49710" + }, + { + "$ref": "monomer49711" + }, + { + "$ref": "monomer49718" + }, + { + "$ref": "monomer49719" + }, + { + "$ref": "monomer49720" + }, + { + "$ref": "monomer49721" + }, + { + "$ref": "monomer49722" + }, + { + "$ref": "monomer49723" + }, + { + "$ref": "monomer49724" + }, + { + "$ref": "monomer49725" + }, + { + "$ref": "monomer49726" + }, + { + "$ref": "monomer49727" + }, + { + "$ref": "monomer49728" + }, + { + "$ref": "monomer49729" + }, + { + "$ref": "monomer49730" + }, + { + "$ref": "monomer49731" + }, + { + "$ref": "monomer49732" + }, + { + "$ref": "monomer49733" + }, + { + "$ref": "monomer49734" + }, + { + "$ref": "monomer49735" + }, + { + "$ref": "monomer49736" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48848", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48849", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48849", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48850", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48850", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48851", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48851", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48852", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48852", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48853", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48853", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48854", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48854", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48855", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48855", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48856", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48856", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48857", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48857", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48858", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48858", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48859", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48860", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48861", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48872", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48873", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48861", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48862", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48862", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48863", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48863", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48864", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48864", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48865", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48865", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48866", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48866", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48867", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48867", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48868", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48868", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48869", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48869", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48870", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48870", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48871", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48873", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48874", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48874", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48875", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48875", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48876", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48876", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48877", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48877", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48878", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48878", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48879", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48879", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48880", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48880", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48881", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48881", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48882", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48882", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48883", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48843", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48848", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48845", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48860", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48846", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48872", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48847", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48884", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48884", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48885", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48885", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48886", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48886", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48887", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48888", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48889", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48889", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48890", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48890", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48891", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48892", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48893", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48893", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48894", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48894", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48895", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48887", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48888", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48891", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48892", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48896", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48897", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48897", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48898", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48898", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48899", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48844", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48896", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer48900", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer48901", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": 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b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.1.ket new file mode 100644 index 0000000000..18d3145457 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/4.1.ket @@ -0,0 +1,7304 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer18207" + }, + { + "$ref": "monomer18208" + }, + { + "$ref": "monomer18209" + }, + { + "$ref": "monomer18210" + }, + { + "$ref": "monomer18211" + }, + { + "$ref": "monomer18212" + }, + { + "$ref": "monomer18213" + }, + { + "$ref": "monomer18214" + }, + { + "$ref": "monomer18215" + }, + { + "$ref": "monomer18216" + }, + { + "$ref": "monomer18217" + }, + { + "$ref": "monomer18218" + }, + { + "$ref": "monomer18219" + }, + { + "$ref": "monomer18220" + }, + { + "$ref": "monomer18221" + }, + { + "$ref": "monomer18222" + }, + { + "$ref": "monomer18223" + }, + { + "$ref": "monomer18224" + }, + { + "$ref": "monomer18225" + }, + { + "$ref": "monomer18226" + }, + { + "$ref": "monomer18227" + }, + { + "$ref": "monomer18228" 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"attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer19765", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer19765", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer19766", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer19766", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer19767", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer19767", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer19768", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer19768", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer19769", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer19769", + 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"$ref": "monomer20600" + }, + { + "$ref": "monomer20601" + }, + { + "$ref": "monomer20602" + }, + { + "$ref": "monomer20603" + }, + { + "$ref": "monomer20604" + }, + { + "$ref": "monomer20605" + }, + { + "$ref": "monomer20606" + }, + { + "$ref": "monomer20607" + }, + { + "$ref": "monomer20608" + }, + { + "$ref": "monomer20609" + }, + { + "$ref": "monomer20610" + }, + { + "$ref": "monomer20611" + }, + { + "$ref": "monomer20612" + }, + { + "$ref": "monomer20613" + }, + { + "$ref": "monomer20614" + }, + { + "$ref": "monomer20615" + }, + { + "$ref": "monomer20616" + }, + { + "$ref": "monomer20617" + }, + { + "$ref": "monomer20618" + }, + { + "$ref": "monomer20619" + }, + { + "$ref": "monomer20620" + }, + { + "$ref": "monomer20621" + }, + { + "$ref": "monomer20622" + }, + { + "$ref": "monomer20623" + }, + { + "$ref": "monomer20624" + }, + { + "$ref": "monomer20625" + }, + { + "$ref": "monomer20626" + }, + { + "$ref": "monomer20627" + }, + { + "$ref": "monomer20628" + }, + { + "$ref": 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"attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20460", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20461", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20461", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20462", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20462", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20463", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20459", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20460", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20464", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20465", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20465", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20466", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20467", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20468", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20468", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20469", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20469", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20470", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20466", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20467", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20471", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20472", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20472", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20473", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20473", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20474", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20475", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20476", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20476", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20477", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20477", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20478", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20480", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20481", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20474", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20475", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20478", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20479", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20482", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20483", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20483", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20484", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20484", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20485", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20486", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20487", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20487", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20488", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20488", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20489", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20491", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20492", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20485", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20486", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20489", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20490", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20463", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20471", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20470", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20482", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20493", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20494", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20494", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20495", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20495", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20496", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20496", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20497", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20497", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20498", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20498", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20499", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20500", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20501", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20501", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20502", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20502", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20503", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20503", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20504", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20504", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20505", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20505", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20506", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20507", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20508", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20508", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20509", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20509", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20510", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20510", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20511", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20511", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20512", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20512", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20513", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20513", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20514", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20514", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20515", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20516", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20517", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20518", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20519", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20519", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20520", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20520", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20521", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20521", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20522", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20522", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20523", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20523", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20524", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20524", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20525", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20525", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20526", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20527", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20528", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20499", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20507", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20506", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20518", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20529", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20530", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20530", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20531", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20531", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20532", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20532", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20533", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20533", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20534", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20534", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20535", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20536", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20537", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer20537", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer20538", + 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"connectionType": "single", + "endpoint1": { + "monomerId": "monomer21289", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21290", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21290", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21291", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21291", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21292", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21292", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21293", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21293", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21294", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21295", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21296", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21285", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21286", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21297", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21298", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21298", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21299", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21299", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21300", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21300", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21301", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21301", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21302", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21302", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21303", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21304", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21305", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21305", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21306", + "attachmentPointId": "R1" + } + }, + { + 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"connectionType": "single", + "endpoint1": { + "monomerId": "monomer21311", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21312", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21313", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21314", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21303", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21304", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21315", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21316", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21316", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21317", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21317", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21318", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21318", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21319", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21319", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21320", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21320", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21321", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21322", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21323", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21323", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21324", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21324", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21325", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21325", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21326", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21326", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21327", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21327", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21328", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21328", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21329", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21329", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21330", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21331", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21332", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21321", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21322", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21333", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21334", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21334", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21335", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21335", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21336", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21336", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21337", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21337", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21338", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21338", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21339", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21340", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21341", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21341", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21342", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21342", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21343", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21343", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21344", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21344", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21345", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21345", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21346", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21346", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21347", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21347", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21348", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21349", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21350", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21339", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21340", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21351", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21352", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21352", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21353", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21353", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21354", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21354", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21355", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21355", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21356", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21356", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21357", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21358", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21359", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21359", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21360", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21360", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21361", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21361", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21362", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21362", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21363", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21363", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21364", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21364", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21365", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21365", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21366", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21367", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21368", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21357", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21358", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21369", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21370", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21370", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21371", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21371", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21372", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21372", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21373", + "attachmentPointId": "R1" + } + }, + { + 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"attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22002", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22002", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22003", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22003", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22004", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22005", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22006", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22007", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22008", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22008", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22009", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22009", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22010", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22011", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22012", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22012", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22013", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22013", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22014", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22016", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22017", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22010", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22011", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22014", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22015", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22018", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22019", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22019", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22020", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22020", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22021", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22022", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22023", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22023", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22024", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22024", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22025", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22027", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22028", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22021", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22022", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22025", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22026", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21963", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21985", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21970", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer21996", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21977", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22007", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer21984", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22018", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22029", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22030", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22030", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22031", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22031", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22032", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22032", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22033", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22033", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22034", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22034", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22035", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22036", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22037", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22037", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22038", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22038", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22039", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22039", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22040", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22040", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22041", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22041", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22042", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22042", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22043", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22043", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22044", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22045", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22046", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22035", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22036", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22047", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22048", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22048", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22049", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22049", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22050", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22050", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22051", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22051", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22052", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22052", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22053", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22054", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22055", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22055", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22056", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22056", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22057", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22057", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22058", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22058", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22059", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22059", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22060", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22060", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22061", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22061", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22062", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22063", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22064", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22053", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22054", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22065", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22066", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22066", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22067", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22067", + 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"attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22074", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22074", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22075", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22075", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22076", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22076", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22077", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22077", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer22078", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer22078", + 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"connectionType": "single", + "endpoint1": { + "monomerId": "monomer61524", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61525", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61525", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61526", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61521", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61522", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61529", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61530", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61530", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61531", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61531", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61532", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61532", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61533", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61534", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61535", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61535", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61536", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61536", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61537", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61533", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61534", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61526", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61537", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61529", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61518", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61525", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61536", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61530", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61519", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61524", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61535", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61531", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61520", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61523", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61534", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61532", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61521", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61522", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61533", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61540", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61541", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61541", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61542", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61542", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61543", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61543", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61544", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61544", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61545", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61545", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61546", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61546", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61547", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61547", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61548", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61551", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61552", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61552", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61553", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61553", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61554", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61554", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61555", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61555", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61556", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61556", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61557", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61557", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61558", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61558", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61559", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61548", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61559", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61547", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61558", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61546", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61557", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61545", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61556", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61544", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61555", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61551", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61540", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61552", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61541", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61553", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61542", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61554", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61543", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61562", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61563", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61563", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61564", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61564", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61565", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61565", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61566", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61566", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61567", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61568", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61569", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61569", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61570", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61573", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61574", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61567", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61568", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61575", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61576", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61576", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61577", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61577", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61578", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61578", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61579", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61579", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61580", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61580", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61581", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61574", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61575", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61570", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61581", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61569", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61580", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61568", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61579", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61567", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61578", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61573", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61562", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61574", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61563", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61575", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61564", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61576", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61565", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61577", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61566", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61584", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61585", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61585", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61586", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61586", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61587", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61588", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61589", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61589", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61590", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61590", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61591", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61591", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61592", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61587", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61588", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61595", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61596", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61596", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61597", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61598", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61599", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61599", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61600", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61600", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61601", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61601", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61602", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61597", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61598", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61602", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer61603", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61592", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61603", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61591", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61602", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61590", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61601", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61589", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61600", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61588", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61599", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61595", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61584", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61596", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer61585", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61597", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer61586", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer61598", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer61587", + "attachmentPointId": "R5" + } + }, + { + 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"Test-6-P", + "templateId": "Test-6-P___Test-6-AP-Peptide" + }, + "monomer2089": { + "type": "monomer", + "id": "2089", + "position": { + "x": 7.25, + "y": -1.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer2090": { + "type": "monomer", + "id": "2090", + "position": { + "x": 7.25, + "y": -2.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2091": { + "type": "monomer", + "id": "2091", + "position": { + "x": 7.25, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2092": { + "type": "monomer", + "id": "2092", + "position": { + "x": 7.25, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2093": { + "type": "monomer", + "id": "2093", + "position": { + "x": 7.25, + "y": -7.25 + }, + "alias": "Test-6-P", + "templateId": "Test-6-P___Test-6-AP-Peptide" + }, + "monomer2094": { + "type": 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"(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2100": { + "type": "monomer", + "id": "2100", + "position": { + "x": 4.25, + "y": -4.25 + }, + "alias": "Test-6-P", + "templateId": "Test-6-P___Test-6-AP-Peptide" + }, + "monomer2101": { + "type": "monomer", + "id": "2101", + "position": { + "x": 2.75, + "y": -1.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2102": { + "type": "monomer", + "id": "2102", + "position": { + "x": 2.75, + "y": -2.75 + }, + "alias": "Test-6-P", + "templateId": "Test-6-P___Test-6-AP-Peptide" + }, + "monomer2103": { + "type": "monomer", + "id": "2103", + "position": { + "x": 1.25, + "y": -1.25 + }, + "alias": "Test-6-P", + "templateId": "Test-6-P___Test-6-AP-Peptide" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.ket new file mode 100644 index 0000000000..ba245173de --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/6.ket @@ -0,0 +1,9355 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer30101" + }, + { + "$ref": "monomer30102" + }, + { + "$ref": "monomer30103" + }, + { + "$ref": "monomer30104" + }, + { + "$ref": "monomer30105" + }, + { + "$ref": "monomer30106" + }, + { + "$ref": "monomer30107" + }, + { + "$ref": "monomer30108" + }, + { + "$ref": "monomer30109" + }, + { + "$ref": "monomer30110" + }, + { + "$ref": "monomer30111" + }, + { + "$ref": "monomer30112" + }, + { + "$ref": "monomer30113" + }, + { + "$ref": "monomer30114" + }, + { + "$ref": "monomer30115" + }, + { + "$ref": "monomer30116" + }, + { + "$ref": "monomer30117" + }, + { + "$ref": "monomer30118" + }, + { + "$ref": "monomer30119" + }, + { + "$ref": "monomer30120" + }, + { + "$ref": "monomer30121" + }, + { + "$ref": "monomer30122" + }, + { + "$ref": "monomer30123" + }, + { + "$ref": "monomer30124" + }, + { + "$ref": 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"(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer30338": { + "type": "monomer", + "id": "30338", + "position": { + "x": 28.25, + "y": -1.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.1.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.1.ket new file mode 100644 index 0000000000..716c66bad8 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/7.1.ket @@ -0,0 +1,1425 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer299" + }, + { + "$ref": "monomer300" + }, + { + "$ref": "monomer301" + }, + { + "$ref": "monomer302" + }, + { + "$ref": "monomer303" + }, + { + "$ref": "monomer304" + }, + { + "$ref": "monomer305" + }, + { + "$ref": "monomer306" + }, + { + "$ref": "monomer307" + }, + { + "$ref": "monomer308" + }, + { + "$ref": "monomer339" + }, + { + "$ref": 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7.208310632039088, + -1.4088307318339968, + 0 + ] + }, + { + "label": "H", + "location": [ + 6.641392560084315, + 0.22714046428660517, + 0 + ] + }, + { + "label": "C", + "location": [ + -3.1882976496708713, + -0.42575507214285024, + 0 + ] + }, + { + "label": "C", + "location": [ + -3.0010134053500495, + 0.556320849589288, + 0 + ] + }, + { + "label": "C", + "location": [ + -3.757815040319065, + 1.2095496320050794, + 0 + ] + }, + { + "label": "N", + "location": [ + -4.701967568806169, + 0.8807024926887326, + 0 + ] + }, + { + "label": "C", + "location": [ + -4.88925181312699, + -0.10130677984613844, + 0 + ] + }, + { + "label": "O", + "location": [ + -5.833337692416828, + -0.4301539191624852, + 0 + ] + }, + { + "label": "O", + "location": [ + -3.5705307959982426, + 2.1915589045399506, + 0 + ] + }, + { + "label": "N", + "location": [ + -4.132383528960708, + -0.7545355622619299, + 0 + ] + }, + { + "label": "C", + "location": [ + -2.055661191312137, + 0.8833684605794204, + 0 + ] + }, + { + "label": "H", + "location": [ + -4.31966777328153, + -1.7366114839940678, + 0 + ] + }, + { + "label": "C", + "location": [ + -1.2993927499212605, + 0.22874004502101788, + 0 + ] + }, + { + "label": "C", + "location": [ + -0.3540405358833471, + 0.5557876560111504, + 0 + ] + }, + { + "label": "N", + "location": [ + 0.40222790550752996, + -0.09884075954725216, + 0 + ] + }, + { + "label": "O", + "location": [ + -0.1650900616308454, + 1.5375303317569524, + 0 + ] + } + ], + "bonds": [ + { + "type": 1, + "atoms": [ + 21, + 0 + ] + }, + { + "type": 1, + "atoms": [ + 0, + 1 + ] + }, + { + "type": 1, + "atoms": [ + 1, + 2 + ] + }, + { + "type": 1, + "atoms": [ + 2, + 3 + ] + }, + { + "type": 1, + "atoms": [ + 3, + 4 + ] + }, + { + "type": 1, + "atoms": [ + 4, + 5 + ] + }, + { + "type": 1, + "atoms": [ + 5, + 6 + ] + }, + { + "type": 1, + "atoms": [ + 6, + 7 + ] + }, + { + "type": 1, + "atoms": [ + 6, + 8 + ] + }, + { + "type": 2, + "atoms": [ + 9, + 10 + ] + }, + { + "type": 1, + "atoms": [ + 10, + 11 + ] + }, + { + "type": 1, + "atoms": [ + 11, + 12 + ] + }, + { + "type": 1, + "atoms": [ + 12, + 13 + ] + }, + { + "type": 2, + "atoms": [ + 13, + 14 + ] + }, + { + "type": 2, + "atoms": [ + 11, + 15 + ] + }, + { + "type": 1, + "atoms": [ + 16, + 9 + ] + }, + { + "type": 1, + "atoms": [ + 16, + 13 + ] + }, + { + "type": 1, + "atoms": [ + 10, + 17 + ] + }, + { + "type": 1, + "atoms": [ + 16, + 18 + ] + }, + { + "type": 2, + "atoms": [ + 17, + 19 + ] + }, + { + "type": 1, + "atoms": [ + 19, + 20 + ] + }, + { + "type": 1, + "atoms": [ + 20, + 21 + ] + }, + { + "type": 2, + "atoms": [ + 20, + 22 + ] + } + ], + "class": "Base", + "classHELM": "RNA", + "id": "Base_R1_R2_R3_R4_R5_", + "fullName": "(R1,R2,R3,R4,R5)", + "alias": "(R1,R2,R3,R4,R5)", + "attachmentPoints": [ + { + "attachmentAtom": 16, + "leavingGroup": { + "atoms": [ + 18 + ] + }, + "type": "left" + }, + { + "attachmentAtom": 6, + "leavingGroup": { + "atoms": [ + 7 + ] + }, + "type": "right" + }, + { + "attachmentAtom": 6, + "leavingGroup": { + "atoms": [ + 8 + ] + }, + "type": "side" + }, + { + "attachmentAtom": 4, + "leavingGroup": { + "atoms": [ + 5 + ] + }, + "type": "side" + }, + { + "attachmentAtom": 2, + "leavingGroup": { + "atoms": [ + 3 + ] + }, + "type": "side" + } + ], + "naturalAnalogShort": "G" + }, + "monomer718": { + "type": "monomer", + "id": "718", + "position": { + "x": 4.25, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer719": { + "type": "monomer", + "id": "719", + "position": { + "x": 1.25, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer720": { + "type": "monomer", + "id": "720", + "position": { + "x": 5.75, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer721": { + "type": "monomer", + "id": "721", + "position": { + "x": 1.25, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer722": { + "type": "monomer", + "id": "722", + "position": { + "x": 7.25, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer723": { + "type": "monomer", + "id": "723", + "position": { + "x": 1.25, + "y": -11.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer724": { + "type": "monomer", + "id": "724", + "position": { + "x": 8.75, + "y": -13.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer725": { + "type": "monomer", + "id": "725", + "position": { + "x": 1.25, + "y": -14.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file From 1d664ac4fdeef6e789d09986fd1b9fd09800430a Mon Sep 17 00:00:00 2001 From: Alexey Girin Date: Tue, 16 Jul 2024 12:12:00 +0300 Subject: [PATCH 2/5] 5041 - Displaying Side Chain connections - second part --- .../Snake-Mode/side-chain-connections.spec.ts | 350 +- ...nce-mode-to-flex-mode-1-chromium-linux.png | Bin 0 -> 93851 bytes ...side-chain-connection-1-chromium-linux.png | Bin 0 -> 45709 bytes ...n-connection-and-Undo-1-chromium-linux.png | Bin 0 -> 45671 bytes ...n-connection-and-Undo-2-chromium-linux.png | Bin 0 -> 45687 bytes ...-connections-and-Undo-1-chromium-linux.png | Bin 0 -> 42494 bytes ...-connections-and-Undo-2-chromium-linux.png | Bin 0 -> 45684 bytes ...NA-structure-and-Undo-2-chromium-linux.png | Bin 0 -> 52536 bytes ...NA-structure-and-Undo-1-chromium-linux.png | Bin 0 -> 44843 bytes ...ide-chain-connections-1-chromium-linux.png | Bin 0 -> 44985 bytes ...ide-chain-connections-2-chromium-linux.png | Bin 0 -> 78449 bytes ...n-SVG-Document-format-1-chromium-linux.png | Bin 0 -> 82316 bytes ...n-SVG-Document-format-1-chromium-linux.png | Bin 0 -> 25951 bytes ...Micro-and-Macro-modes-1-chromium-linux.png | Bin 0 -> 44847 bytes ...Micro-and-Macro-modes-2-chromium-linux.png | Bin 0 -> 45226 bytes ...Micro-and-Macro-modes-3-chromium-linux.png | Bin 0 -> 18689 bytes ...ake-mode-to-flex-mode-1-chromium-linux.png | Bin 0 -> 138547 bytes ...mode-to-sequence-mode-1-chromium-linux.png | Bin 0 -> 29909 bytes .../KET/Side-Chain-Connections/10.ket | 6399 +++++++++++ .../KET/Side-Chain-Connections/11.ket | 3356 ++++++ .../KET/Side-Chain-Connections/12.ket | 3356 ++++++ .../KET/Side-Chain-Connections/13.ket | 3356 ++++++ .../KET/Side-Chain-Connections/14.ket | 3435 ++++++ .../KET/Side-Chain-Connections/15.ket | 3356 ++++++ .../KET/Side-Chain-Connections/16.ket | 3356 ++++++ .../KET/Side-Chain-Connections/17.ket | 3356 ++++++ .../KET/Side-Chain-Connections/18.ket | 3455 ++++++ .../Side-Chain-Connections/19-expected.ket | 8418 +++++++++++++++ .../KET/Side-Chain-Connections/19.ket | 8418 +++++++++++++++ .../Side-Chain-Connections/20-expected.mol | 1175 ++ .../KET/Side-Chain-Connections/20.ket | 8418 +++++++++++++++ .../KET/Side-Chain-Connections/8.ket | 9520 +++++++++++++++++ .../KET/Side-Chain-Connections/9.ket | 8418 +++++++++++++++ 33 files changed, 78140 insertions(+), 2 deletions(-) create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-10-Verify-display-of-s-c0d85-hen-switching-from-sequence-mode-to-flex-mode-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-11-Verify-selection-of-a-single-side-chain-connection-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-12-Verify-deletion-of-a-single-side-chain-connection-and-Undo-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-12-Verify-deletion-of-a-single-side-chain-connection-and-Undo-2-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-13-Verify-deletion-of-multiple-side-chain-connections-and-Undo-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-13-Verify-deletion-of-multiple-side-chain-connections-and-Undo-2-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-14-Verify-deletion-of--77d55-onnection-in-a-complex-RNA-structure-and-Undo-2-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-14-Verify-deletion-of--cebbd-onnection-in-a-complex-RNA-structure-and-Undo-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-15-Verify-copy-paste-of-a-structure-with-side-chain-connections-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-15-Verify-copy-paste-of-a-structure-with-side-chain-connections-2-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-16-Verify-saving-struc-bbf4c-side-chain-connections-in-SVG-Document-format-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-17-Verify-saving-struc-70169-side-chain-connections-in-SVG-Document-format-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-18-Check-that-display--396d3--when-switching-between-Micro-and-Macro-modes-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-18-Check-that-display--3e3be--when-switching-between-Micro-and-Macro-modes-2-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-18-Check-that-display--9985f--when-switching-between-Micro-and-Macro-modes-3-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-8-Verify-display-of-si-b9771-s-when-switching-from-snake-mode-to-flex-mode-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-9-Verify-display-of-si-2917a-en-switching-from-snake-mode-to-sequence-mode-1-chromium-linux.png create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/10.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/11.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/12.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/13.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/14.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/15.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/16.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/17.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/18.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19-expected.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20-expected.mol create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/8.ket create mode 100644 ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/9.ket diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts index 837e1c62ba..23adf127a3 100755 --- a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts +++ b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts @@ -1,12 +1,79 @@ -import { test } from '@playwright/test'; +import { Page, test } from '@playwright/test'; import { selectSnakeLayoutModeTool, takeEditorScreenshot, waitForPageInit, openFileAndAddToCanvasMacro, moveMouseAway, + selectFlexLayoutModeTool, + selectSequenceLayoutModeTool, + selectEraseTool, + clickUndo, + selectRectangleSelectionTool, + waitForRender, + selectTopPanelButton, + TopPanelButton, + getKet, + saveToFile, + receiveFileComparisonData, + getMolfile, } from '@utils'; -import { turnOnMacromoleculesEditor } from '@utils/macromolecules'; +import { + turnOnMacromoleculesEditor, + turnOnMicromoleculesEditor, +} from '@utils/macromolecules'; + +async function clickNthConnectionLine(page: Page, n: number) { + const bondLine = page.locator('g[pointer-events="stroke"]').nth(n); + await bondLine.click(); +} + +enum FileFormat { + SVGDocument = 'SVG Document', + PNGImage = 'PNG Image', +} + +async function clickOnFileFormatDropdown(page: Page) { + await page.getByRole('combobox').click(); +} + +async function closeSaveStrutureDialog(page: Page) { + await page.getByRole('button', { name: 'Cancel' }).click(); +} +async function saveFileAsPngOrSvgFormat(page: Page, FileFormat: string) { + await selectTopPanelButton(TopPanelButton.Save, page); + await clickOnFileFormatDropdown(page); + await page.getByRole('option', { name: FileFormat }).click(); +} + +async function saveToKet(page: Page, fileName: string) { + const expectedKetFile = await getKet(page); + await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedKetFile); + + const { fileExpected: ketFileExpected, file: ketFile } = + await receiveFileComparisonData({ + page, + expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, + }); + + expect(ketFile).toEqual(ketFileExpected); +} + +async function saveToMol(page: Page, fileName: string) { + const ignoredLineIndigo = 1; + const expectedMolFile = await getMolfile(page, 'v3000'); + await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedMolFile); + + const { fileExpected: molFileExpected, file: molFile } = + await receiveFileComparisonData({ + page, + expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, + metaDataIndexes: [ignoredLineIndigo], + fileFormat: 'v3000', + }); + + expect(molFile).toEqual(molFileExpected); +} test.describe('Side chain connections', () => { test.beforeEach(async ({ page }) => { @@ -842,4 +909,283 @@ test.describe('Side chain connections', () => { await moveMouseAway(page); await takeEditorScreenshot(page); }); + + test('8. Verify display of side-chain connections when switching from snake mode to flex mode', async ({ + page, + }) => { + /* + /* Case 8: Verify display of side-chain connections when switching from snake mode to flex mode + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro(`KET/Side-Chain-Connections/8.ket`, page); + await selectFlexLayoutModeTool(page); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('9. Verify display of side-chain connections when switching from snake mode to sequence mode', async ({ + page, + }) => { + /* + /* Case 9: Verify display of side-chain connections when switching from snake mode to sequence mode + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro(`KET/Side-Chain-Connections/9.ket`, page); + await selectSequenceLayoutModeTool(page); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('10. Verify display of side-chain connections when switching from sequence mode to flex mode', async ({ + page, + }) => { + /* + /* Case 10: Verify display of side-chain connections when switching from sequence mode to flex mode + */ + + await selectSequenceLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/10.ket`, + page, + ); + await selectFlexLayoutModeTool(page); + await moveMouseAway(page); + await takeEditorScreenshot(page); + }); + + test('11. Verify selection of a single side-chain connection', async ({ + page, + }) => { + /* + /* Case 11: Verify selection of a single side-chain connection + */ + + await selectFlexLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/11.ket`, + page, + ); + + const randomSideBondToSelect = 12; + await clickNthConnectionLine(page, randomSideBondToSelect); + await takeEditorScreenshot(page); + }); + + test('12. Verify deletion of a single side-chain connection and Undo', async ({ + page, + }) => { + /* + /* Case 12: Verify deletion of a single side-chain connection and Undo + */ + + await selectFlexLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/12.ket`, + page, + ); + + const randomSideBondToSelect = 12; + await clickNthConnectionLine(page, randomSideBondToSelect); + // await takeEditorScreenshot(page); + await selectEraseTool(page); + await takeEditorScreenshot(page); + await clickUndo(page); + await takeEditorScreenshot(page); + }); + + test('13. Verify deletion of multiple side-chain connections and Undo', async ({ + page, + }) => { + /* + /* Case 13: Verify deletion of multiple side-chain connections and Undo + */ + + await selectFlexLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/13.ket`, + page, + ); + + // Selectiong ALL 60 available bonds + const numberOfBondsToSelectAndDelete = 60; + await selectRectangleSelectionTool(page); + for (let i = 0; i < numberOfBondsToSelectAndDelete; i = i + 1) { + await page.keyboard.down('Shift'); + await clickNthConnectionLine(page, i); + await page.keyboard.up('Shift'); + } + await selectEraseTool(page); + await takeEditorScreenshot(page); + + await clickUndo(page); + await takeEditorScreenshot(page); + }); + + test('14. Verify deletion of a side-chain connection in a complex RNA structure and Undo', async ({ + page, + }) => { + /* + /* Case 14: Verify deletion of a side-chain connection in a complex RNA structure and Undo + */ + + await selectFlexLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/14.ket`, + page, + ); + + // Selecting ALL 53 available bonds + const numberOfBondsToSelectAndDelete = 53; + await selectRectangleSelectionTool(page); + for (let i = 0; i < numberOfBondsToSelectAndDelete; i = i + 1) { + await page.keyboard.down('Shift'); + await clickNthConnectionLine(page, i); + await page.keyboard.up('Shift'); + } + await selectEraseTool(page); + await takeEditorScreenshot(page); + + await clickUndo(page); + await takeEditorScreenshot(page); + }); + + test('15. Verify copy-paste of a structure with side-chain connections', async ({ + page, + }) => { + /* + /* Case 15: Verify copy-paste of a structure with side-chain connections + */ + + await selectSnakeLayoutModeTool(page); + // Closing Library to enlarge canvas + await page.getByText('Hide').click(); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/15.ket`, + page, + ); + await takeEditorScreenshot(page); + + await page.keyboard.press('Control+a'); + await waitForRender(page, async () => { + await page.keyboard.press('Control+c'); + }); + await waitForRender(page, async () => { + await page.keyboard.press('Control+v'); + }); + await takeEditorScreenshot(page); + }); + + test('16. Verify saving structure with side-chain connections in SVG Document format', async ({ + page, + }) => { + /* + /* + Case 16: Verify saving structure with side-chain connections in SVG Document format + */ + await selectSnakeLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/16.ket`, + page, + ); + await saveFileAsPngOrSvgFormat(page, FileFormat.SVGDocument); + await takeEditorScreenshot(page); + // Closing Save dialog + await closeSaveStrutureDialog(page); + }); + + test('17. Verify saving structure with side-chain connections in SVG Document format', async ({ + page, + }) => { + /* + /* + Case 17: Verify saving structure with side-chain connections in SVG Document format + */ + await selectSnakeLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/17.ket`, + page, + ); + + await waitForRender(page, async () => { + await turnOnMicromoleculesEditor(page); + }); + + await takeEditorScreenshot(page); + }); + + test('18. Check that display of side-chain connections does not visually change when switching between Micro and Macro modes', async ({ + page, + }) => { + /* + /* + Case 18: Check that display of side-chain connections does not visually change when switching between Micro and Macro modes + */ + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/18.ket`, + page, + ); + + await waitForRender(page, async () => { + await turnOnMicromoleculesEditor(page); + }); + + await waitForRender(page, async () => { + await turnOnMacromoleculesEditor(page); + }); + + await selectFlexLayoutModeTool(page); + await takeEditorScreenshot(page); + + await selectSnakeLayoutModeTool(page); + await takeEditorScreenshot(page); + + await selectSequenceLayoutModeTool(page); + await takeEditorScreenshot(page); + }); + + test('19. Verify saving and opening structure with side-chain connections in KET format', async ({ + page, + }) => { + /* + /* + /* Case 19: Verify saving and opening structure with side-chain connections in KET format + */ + await selectSequenceLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/19.ket`, + page, + ); + await saveToKet(page, '19-expected.ket'); + }); + + test('20. Verify saving and opening structure with side-chain connections in MOL V3000 format', async ({ + page, + }) => { + /* + /* + /* Case 20: Verify saving and opening structure with side-chain connections in MOL V3000 format + */ + await selectSequenceLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/20.ket`, + page, + ); + await saveToMol(page, '20-expected.mol'); + }); }); diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-10-Verify-display-of-s-c0d85-hen-switching-from-sequence-mode-to-flex-mode-1-chromium-linux.png b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-10-Verify-display-of-s-c0d85-hen-switching-from-sequence-mode-to-flex-mode-1-chromium-linux.png new file mode 100644 index 0000000000000000000000000000000000000000..0b6c45459c98841b166ca6d5694900e47767ba10 GIT binary patch literal 93851 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0000000000..d7f2315de9 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/10.ket @@ -0,0 +1,6399 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer464" + }, + { + "$ref": "monomer465" + }, + { + "$ref": "monomer466" + }, + { + "$ref": "monomer467" + }, + { + "$ref": "monomer468" + }, + { + "$ref": "monomer469" + }, + { + "$ref": "monomer470" + }, + { + "$ref": "monomer471" + }, + { + "$ref": "monomer472" + }, + { + "$ref": "monomer473" + }, + { + "$ref": "monomer474" + }, + { + "$ref": "monomer475" + }, + { + "$ref": "monomer476" + }, + { + "$ref": "monomer477" + }, + { + "$ref": "monomer478" + }, + { + "$ref": "monomer479" + }, + { + "$ref": "monomer480" + }, + { + "$ref": "monomer481" + }, + { + "$ref": "monomer482" + }, + { + "$ref": "monomer483" + }, + { + "$ref": "monomer484" + }, + { + "$ref": "monomer485" + }, + { + "$ref": "monomer486" + }, + { + "$ref": "monomer487" + }, + { + "$ref": "monomer488" + }, + { + "$ref": "monomer489" + }, + { + "$ref": "monomer490" + }, + { + "$ref": "monomer491" + }, + { + "$ref": "monomer492" + }, + { + "$ref": "monomer493" + }, + { + "$ref": "monomer494" + }, + { + "$ref": "monomer495" + }, + { + "$ref": "monomer496" + }, + { + "$ref": "monomer497" + }, + { + "$ref": "monomer498" + }, + { + "$ref": "monomer499" + }, + { + "$ref": "monomer500" + }, + { + "$ref": "monomer501" + }, + { + "$ref": "monomer502" + }, + { + "$ref": "monomer503" + }, + { + "$ref": "monomer504" + }, + { + "$ref": "monomer505" + }, + { + "$ref": "monomer506" + }, + { + "$ref": "monomer507" + }, + { + "$ref": "monomer508" + }, + { + "$ref": "monomer509" + }, + { + "$ref": "monomer510" + }, + { + "$ref": "monomer511" + }, + { + "$ref": "monomer512" + }, + { + "$ref": "monomer513" + }, + { + "$ref": "monomer514" + }, + { + "$ref": "monomer515" + }, + { + "$ref": "monomer516" + }, + { + "$ref": "monomer517" + }, + { + "$ref": "monomer518" + }, + { + "$ref": "monomer519" + }, + { + "$ref": "monomer520" + }, + { + "$ref": 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"connectionType": "single", + "endpoint1": { + "monomerId": "monomer493", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer492", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer492", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer491", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer489", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer488", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer491", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer489", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer488", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer490", + "attachmentPointId": "R1" + } + }, + { + "connectionType": 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"monomerId": "monomer494", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer481", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer496", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer480", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer505", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer479", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer504", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer503", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer484", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer501", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer493", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer500", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer492", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer502", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer491", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer511", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer489", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer510", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer488", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer509", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer490", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer507", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer499", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer506", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer498", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer508", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer497", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer517", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer495", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer516", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer494", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer515", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer496", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer513", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer505", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer512", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer504", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer528", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer503", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer527", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer501", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer500", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer525", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer502", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer524", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer511", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer526", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer535", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer510", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer534", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer509", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer533", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer507", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer531", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer506", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer530", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer508", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer532", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer517", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer541", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer516", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer540", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer515", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer539", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer513", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer537", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer512", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer528", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer536", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer527", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer538", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + 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+ "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer570", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer1293", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer569", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer1295", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer567", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer1320", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer566", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer1319", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer568", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer1318", + 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"y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer1339": { + "type": "monomer", + "id": "1339", + "position": { + "x": 26.75, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer1340": { + "type": "monomer", + "id": "1340", + "position": { + "x": 22.25, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer1341": { + "type": "monomer", + "id": "1341", + "position": { + "x": 20.75, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer1342": { + "type": "monomer", + "id": "1342", + "position": { + "x": 19.25, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer1349": { + "type": "monomer", + "id": "1349", + "position": { + "x": 28.25, + "y": -10.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/11.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/11.ket new file mode 100644 index 0000000000..2b2eb0934f --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/11.ket @@ -0,0 +1,3356 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer417" + }, + { + "$ref": "monomer418" + }, + { + "$ref": "monomer419" + }, + { + "$ref": "monomer420" + }, + { + "$ref": "monomer421" + }, + { + "$ref": "monomer422" + }, + { + "$ref": "monomer435" + }, + { + "$ref": "monomer436" + }, + { + "$ref": "monomer437" + }, + { + "$ref": "monomer438" + }, + { + "$ref": "monomer439" + }, + { + "$ref": "monomer446" + }, + { + "$ref": "monomer453" + }, + { + "$ref": "monomer454" + }, + { + "$ref": "monomer455" + }, + { + "$ref": "monomer456" + }, + { + "$ref": "monomer463" + }, + { + "$ref": "monomer464" + }, + { + "$ref": "monomer471" + }, + { + "$ref": "monomer472" + }, + { + "$ref": "monomer473" + }, + { + "$ref": "monomer480" + }, + { + "$ref": "monomer481" + }, + { + "$ref": "monomer482" + }, + { + "$ref": "monomer489" + }, + { + "$ref": "monomer491" + }, + { + "$ref": "monomer496" + }, + { + "$ref": "monomer498" + }, + { + "$ref": "monomer499" + }, + { + "$ref": "monomer500" + }, + { + "$ref": "monomer509" + }, + { + "$ref": "monomer513" + }, + { + "$ref": "monomer514" + }, + { + "$ref": "monomer516" + }, + { + "$ref": "monomer517" + }, + { + "$ref": "monomer518" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer422", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer439", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer439", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer456", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer456", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer472", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer472", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer489", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer489", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer509", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer438", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer421", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer438", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer454", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + 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"position": { + "x": 14.674999999999999, + "y": -6.474999999999997 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer464": { + "type": "monomer", + "id": "464", + "position": { + "x": 13.174999999999994, + "y": -6.474999999999997 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer471": { + "type": "monomer", + "id": "471", + "position": { + "x": 8.674999999999994, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer472": { + "type": "monomer", + "id": "472", + "position": { + "x": 7.174999999999996, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer473": { + "type": "monomer", + "id": "473", + "position": { + "x": 10.174999999999994, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer480": { + "type": "monomer", + "id": "480", + "position": { + "x": 14.674999999999999, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer481": { + "type": "monomer", + "id": "481", + "position": { + "x": 13.174999999999994, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer482": { + "type": "monomer", + "id": "482", + "position": { + "x": 11.674999999999992, + "y": -7.974999999999996 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer489": { + "type": "monomer", + "id": "489", + "position": { + "x": 7.174999999999996, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer491": { + "type": "monomer", + "id": "491", + "position": { + "x": 8.674999999999994, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer496": { + "type": "monomer", + "id": "496", + "position": { + "x": 14.674999999999999, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer498": { + "type": "monomer", + "id": "498", + "position": { + "x": 13.174999999999994, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer499": { + "type": "monomer", + "id": "499", + "position": { + "x": 11.674999999999992, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer500": { + "type": "monomer", + "id": "500", + "position": { + "x": 10.174999999999994, + "y": -9.474999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer509": { + "type": "monomer", + "id": "509", + "position": { + "x": 7.174999999999996, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer513": { + "type": "monomer", + "id": "513", + "position": { + "x": 14.674999999999999, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer514": { + "type": "monomer", + "id": "514", + "position": { + "x": 13.174999999999994, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer516": { + "type": "monomer", + "id": "516", + "position": { + "x": 11.674999999999992, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer517": { + "type": "monomer", + "id": "517", + "position": { + "x": 10.174999999999994, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer518": { + "type": "monomer", + "id": "518", + "position": { + "x": 8.674999999999994, + "y": -10.974999999999994 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/13.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/13.ket new file mode 100644 index 0000000000..2b2eb0934f --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/13.ket @@ -0,0 +1,3356 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer417" + }, + { + "$ref": "monomer418" + }, + { + "$ref": "monomer419" + }, + { + "$ref": "monomer420" + }, + { + "$ref": "monomer421" + }, + { + "$ref": "monomer422" + }, + { + "$ref": "monomer435" + }, + { + "$ref": "monomer436" + }, + { + "$ref": "monomer437" + }, + { + "$ref": "monomer438" + }, + { + "$ref": "monomer439" + }, + { + "$ref": "monomer446" + }, + { + "$ref": "monomer453" + }, + { + "$ref": "monomer454" + }, + { + "$ref": "monomer455" + }, + { + "$ref": "monomer456" + }, + { + "$ref": "monomer463" + }, + { + "$ref": "monomer464" + }, + { + "$ref": "monomer471" + }, + { + "$ref": "monomer472" + }, + { + "$ref": "monomer473" + }, + { + "$ref": "monomer480" + }, + { + "$ref": "monomer481" + }, + { + "$ref": "monomer482" + }, + { + "$ref": "monomer489" + }, + { + "$ref": "monomer491" + }, + { + "$ref": "monomer496" + }, + { + "$ref": "monomer498" + }, + { + "$ref": "monomer499" + }, + { + "$ref": "monomer500" + }, + { + "$ref": "monomer509" + }, + { + "$ref": "monomer513" + }, + { + "$ref": "monomer514" + }, + { + "$ref": "monomer516" + }, + { + "$ref": "monomer517" + }, + { + "$ref": "monomer518" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer422", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer439", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer439", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer456", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer456", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer472", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer472", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer489", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer489", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer509", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer438", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer421", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer438", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer454", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer454", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer471", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer471", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer491", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer491", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer518", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer420", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer436", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer436", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer453", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer453", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer473", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer473", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer500", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer500", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer517", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer418", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer435", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer435", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer455", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer455", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer482", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer482", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer499", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer499", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer516", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer417", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer437", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer437", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer464", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer464", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer481", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer481", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer498", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer498", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer514", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer419", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer446", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer446", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer463", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer463", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer480", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer480", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer496", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer496", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer513", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer514", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer513", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer498", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer496", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer481", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer480", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer464", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer463", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer437", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer446", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer417", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer419", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer516", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer514", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer499", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer498", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer482", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer481", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer455", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer464", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer435", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer437", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer418", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer417", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer517", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer516", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer500", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer499", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer473", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer482", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer453", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer455", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer436", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer435", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer420", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer418", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer518", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer517", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer491", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer500", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer471", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer473", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer454", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer453", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer438", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": 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a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/15.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/15.ket new file mode 100644 index 0000000000..62922e230c --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/15.ket @@ -0,0 +1,3356 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer2815" + }, + { + "$ref": "monomer2816" + }, + { + "$ref": "monomer2817" + }, + { + "$ref": "monomer2818" + }, + { + "$ref": "monomer2819" + }, + { + "$ref": "monomer2820" + }, + { + "$ref": "monomer2821" + }, + { + "$ref": "monomer2822" + }, + { + "$ref": "monomer2823" + }, + { + "$ref": "monomer2824" + }, + { + "$ref": "monomer2825" + }, + { + "$ref": "monomer2826" + }, + { + "$ref": "monomer2827" + }, + { + "$ref": "monomer2828" + }, + { + "$ref": "monomer2829" + }, + { + "$ref": "monomer2830" + }, + { + "$ref": "monomer2831" + }, + { + "$ref": "monomer2832" + }, + { + "$ref": "monomer2833" + }, + { + "$ref": "monomer2834" + }, + { + "$ref": 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+ "type": "monomer", + "id": "2824", + "position": { + "x": 2.75, + "y": -2.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2825": { + "type": "monomer", + "id": "2825", + "position": { + "x": 1.25, + "y": -2.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2826": { + "type": "monomer", + "id": "2826", + "position": { + "x": 8.75, + "y": -2.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2827": { + "type": "monomer", + "id": "2827", + "position": { + "x": 4.25, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer2828": { + "type": "monomer", + "id": "2828", + "position": { + "x": 2.75, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer2829": { + "type": "monomer", + "id": "2829", + "position": { + "x": 5.75, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer2830": { + "type": "monomer", + "id": "2830", + "position": { + "x": 1.25, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2831": { + "type": "monomer", + "id": "2831", + "position": { + "x": 8.75, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2832": { + "type": "monomer", + "id": "2832", + "position": { + "x": 7.25, + "y": -4.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2833": { + "type": "monomer", + "id": "2833", + "position": { + "x": 2.75, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer2834": { + "type": "monomer", + "id": "2834", + "position": { + "x": 1.25, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer2835": { + "type": "monomer", + "id": "2835", + "position": { + "x": 4.25, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer2836": { + "type": "monomer", + "id": "2836", + "position": { + "x": 8.75, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2837": { + "type": "monomer", + "id": "2837", + "position": { + "x": 7.25, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2838": { + "type": "monomer", + "id": "2838", + "position": { + "x": 5.75, + "y": -5.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2839": { + "type": "monomer", + "id": "2839", + "position": { + "x": 1.25, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer2840": { + "type": "monomer", + "id": "2840", + "position": { + "x": 2.75, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer2841": { + "type": "monomer", + "id": "2841", + "position": { + "x": 8.75, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer2842": { + "type": "monomer", + "id": "2842", + "position": { + "x": 7.25, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2843": { + "type": "monomer", + "id": "2843", + "position": { + "x": 5.75, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2844": { + "type": "monomer", + "id": "2844", + "position": { + "x": 4.25, + "y": -7.25 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer2845": { + "type": "monomer", + "id": "2845", + "position": { + "x": 1.25, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer2846": { + "type": "monomer", + "id": "2846", + "position": { + "x": 8.75, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer2847": { + "type": "monomer", + "id": "2847", + "position": { + "x": 7.25, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer2848": { + "type": "monomer", + "id": "2848", + "position": { + "x": 5.75, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer2849": { + "type": "monomer", + "id": "2849", + "position": { + "x": 4.25, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer2850": { + "type": "monomer", + "id": "2850", + "position": { + "x": 2.75, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/16.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/16.ket new file mode 100644 index 0000000000..62922e230c --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/16.ket @@ -0,0 +1,3356 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer2815" + }, + { + "$ref": "monomer2816" + }, + { + "$ref": "monomer2817" + }, + { + "$ref": "monomer2818" + }, + { + "$ref": "monomer2819" + }, + { + "$ref": "monomer2820" + }, + { + "$ref": "monomer2821" + }, + { + "$ref": "monomer2822" + }, + { + "$ref": "monomer2823" + }, + { + "$ref": "monomer2824" + }, + { + "$ref": "monomer2825" + }, + { + "$ref": "monomer2826" + }, + { + "$ref": "monomer2827" + }, + { + "$ref": "monomer2828" + }, + { + "$ref": "monomer2829" + }, + { + "$ref": "monomer2830" + }, + { + "$ref": "monomer2831" + }, + { + "$ref": "monomer2832" + }, + { + "$ref": "monomer2833" + }, + { + "$ref": "monomer2834" + }, + { + "$ref": "monomer2835" + }, + { + "$ref": "monomer2836" + }, + { + "$ref": "monomer2837" + }, + { + "$ref": "monomer2838" + }, + { + "$ref": "monomer2839" + }, + { + "$ref": "monomer2840" + }, + { + "$ref": "monomer2841" + }, + { + "$ref": "monomer2842" + }, + { + "$ref": "monomer2843" + }, + { + "$ref": "monomer2844" + }, + { + "$ref": "monomer2845" + }, + { + "$ref": "monomer2846" + }, + { + "$ref": "monomer2847" + }, + { + "$ref": "monomer2848" + }, + { + "$ref": "monomer2849" + }, + { + "$ref": "monomer2850" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2820", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2825", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2825", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2830", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2830", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2834", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2834", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2839", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2839", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2845", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2824", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2819", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2824", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2828", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2828", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2833", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2833", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2840", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2840", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2850", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2818", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2822", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2822", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2827", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2827", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2835", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2835", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2844", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2844", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2849", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2816", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2821", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2821", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2829", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2829", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2838", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2838", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2843", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2843", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2848", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2815", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2823", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2823", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2832", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2832", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2837", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2837", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2842", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2842", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2847", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2817", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2826", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2826", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2831", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2831", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2836", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2836", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2841", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2841", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2846", + "attachmentPointId": "R5" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2847", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2846", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2842", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2841", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2837", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2836", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2832", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2831", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2823", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2826", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2815", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2817", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2848", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2847", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2843", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2842", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2838", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2837", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2829", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2832", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2821", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2823", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2816", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer2815", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2849", + "attachmentPointId": "R2" + }, + "endpoint2": { + 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100644 index 0000000000..62922e230c --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/17.ket @@ -0,0 +1,3356 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer2815" + }, + { + "$ref": "monomer2816" + }, + { + "$ref": "monomer2817" + }, + { + "$ref": "monomer2818" + }, + { + "$ref": "monomer2819" + }, + { + "$ref": "monomer2820" + }, + { + "$ref": "monomer2821" + }, + { + "$ref": "monomer2822" + }, + { + "$ref": "monomer2823" + }, + { + "$ref": "monomer2824" + }, + { + "$ref": "monomer2825" + }, + { + "$ref": "monomer2826" + }, + { + "$ref": "monomer2827" + }, + { + "$ref": "monomer2828" + }, + { + "$ref": "monomer2829" + }, + { + "$ref": "monomer2830" + }, + { + "$ref": "monomer2831" + }, + { + "$ref": "monomer2832" + }, + { + "$ref": "monomer2833" + }, + { + "$ref": "monomer2834" + }, + { + "$ref": "monomer2835" + }, + { + "$ref": "monomer2836" + }, + { + "$ref": "monomer2837" + }, + { + "$ref": "monomer2838" + }, + { + "$ref": "monomer2839" + }, + { + "$ref": "monomer2840" + }, + { + "$ref": "monomer2841" + }, + { + "$ref": "monomer2842" + }, + { + "$ref": "monomer2843" + }, + { + "$ref": "monomer2844" + }, + { + "$ref": "monomer2845" + }, + { + "$ref": "monomer2846" + }, + { + "$ref": "monomer2847" + }, + { + "$ref": "monomer2848" + }, + { + "$ref": "monomer2849" + }, + { + "$ref": "monomer2850" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2820", + "attachmentPointId": "R3" + }, + "endpoint2": { + "monomerId": "monomer2825", + "attachmentPointId": "R3" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2825", + "attachmentPointId": "R4" + }, + "endpoint2": { + "monomerId": "monomer2830", + "attachmentPointId": "R4" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer2830", + "attachmentPointId": "R5" + }, + "endpoint2": { + "monomerId": "monomer2834", + "attachmentPointId": "R5" + } + }, + { + "connectionType": 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"position": { + "x": 5.75, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer6098": { + "type": "monomer", + "id": "6098", + "position": { + "x": 4.25, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer6099": { + "type": "monomer", + "id": "6099", + "position": { + "x": 2.75, + "y": -8.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19-expected.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19-expected.ket new file mode 100644 index 0000000000..1e6c601361 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19-expected.ket @@ -0,0 +1,8418 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer530" + }, + { + "$ref": "monomer531" + }, + { + "$ref": "monomer532" + }, + { + "$ref": "monomer533" 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+ "x": 22.25, + "y": -17.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer706": { + "type": "monomer", + "id": "706", + "position": { + "x": 17.75, + "y": -17.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer707": { + "type": "monomer", + "id": "707", + "position": { + "x": 16.25, + "y": -17.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer708": { + "type": "monomer", + "id": "708", + "position": { + "x": 14.75, + "y": -17.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer709": { + "type": "monomer", + "id": "709", + "position": { + "x": 11.75, + "y": -17.75 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19.ket new file mode 100644 index 0000000000..e0045f38de --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/19.ket @@ -0,0 +1,8418 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer9054" + }, + { + "$ref": "monomer9261" + }, + { + "$ref": "monomer9267" + }, + { + "$ref": "monomer9272" + }, + { + "$ref": "monomer9276" + }, + { + "$ref": "monomer9279" + }, + { + "$ref": "monomer9676" + }, + { + "$ref": "monomer9677" + }, + { + "$ref": "monomer9678" + }, + { + "$ref": "monomer9679" + }, + { + "$ref": "monomer9680" + }, + { + "$ref": "monomer9681" + }, + { + "$ref": "monomer9722" + }, + { + "$ref": "monomer9723" + }, + { + "$ref": "monomer9724" + }, + { + "$ref": "monomer9725" + }, + { + "$ref": "monomer9726" + }, + { + "$ref": "monomer9727" + }, + { + "$ref": "monomer9792" + }, + { + "$ref": "monomer9793" + }, + { + "$ref": "monomer9794" + }, + { + "$ref": "monomer9795" + }, + { + "$ref": "monomer9796" + }, + { + "$ref": "monomer9797" + }, + { + "$ref": "monomer9814" + }, + { + "$ref": "monomer9815" + }, + { + "$ref": "monomer9816" + }, + { + "$ref": "monomer9817" + }, + { + "$ref": "monomer9818" + }, + { + "$ref": "monomer9819" + }, + { + "$ref": "monomer9836" + }, + { + "$ref": "monomer9837" + }, + { + "$ref": "monomer9838" + }, + { + "$ref": "monomer9839" + }, + { + "$ref": "monomer9840" + }, + { + "$ref": "monomer9841" + }, + { + "$ref": "monomer9865" + }, + { + "$ref": "monomer9866" + }, + { + "$ref": "monomer9867" + }, + { + "$ref": "monomer9868" + }, + { + "$ref": "monomer9869" + }, + { + "$ref": "monomer10163" + }, + { + "$ref": "monomer10164" + }, + { + "$ref": "monomer10165" + }, + { + "$ref": "monomer10166" + }, + { + "$ref": "monomer10167" + }, + { + "$ref": "monomer10168" + }, + { + "$ref": "monomer10169" + }, + { + "$ref": "monomer10170" + }, + { + "$ref": "monomer10171" + }, + { + "$ref": "monomer10172" + }, + { + "$ref": "monomer10173" + }, + { + "$ref": "monomer10174" + }, + { + "$ref": "monomer10175" + }, + { + "$ref": "monomer10176" + }, + { + "$ref": "monomer10177" + }, + { + "$ref": "monomer10178" + }, + { + "$ref": "monomer10179" + }, + { + "$ref": "monomer10180" + }, + { + "$ref": "monomer10181" + }, + { + "$ref": "monomer10183" + }, + { + "$ref": "monomer10184" + }, + { + "$ref": "monomer10185" + }, + { + "$ref": "monomer9864" + }, + { + "$ref": "monomer11937" + }, + { + "$ref": "monomer13239" + }, + { + "$ref": "monomer14347" + }, + { + "$ref": "monomer14348" + }, + { + "$ref": "monomer14349" + }, + { + "$ref": "monomer14350" + }, + { + "$ref": "monomer14351" + }, + { + "$ref": "monomer14352" + }, + { + "$ref": "monomer14353" + }, + { + "$ref": "monomer14354" + }, + { + "$ref": "monomer14355" + }, + { + "$ref": "monomer14356" + }, + { + "$ref": "monomer14357" + }, + { + "$ref": "monomer14358" + }, + { + "$ref": "monomer14359" + }, + { + "$ref": "monomer14360" + }, + { + "$ref": "monomer14361" + }, + { + "$ref": "monomer14362" + }, + { + "$ref": "monomer14363" + }, + { + "$ref": "monomer14364" + }, + { + "$ref": "monomer14365" + }, + { + "$ref": "monomer14366" + }, + { + "$ref": "monomer14367" + }, + { + "$ref": "monomer14368" + }, + { + "$ref": "monomer14369" + }, + { + "$ref": "monomer14370" + }, + { + "$ref": "monomer14371" + }, + { + "$ref": "monomer14372" + }, + { + "$ref": "monomer14373" + }, + { + "$ref": "monomer14374" + }, + { + "$ref": "monomer14375" + }, + { + "$ref": "monomer14376" + }, + { + "$ref": "monomer14377" + }, + { + "$ref": "monomer14378" + }, + { + "$ref": "monomer14379" + }, + { + "$ref": "monomer14380" + }, + { + "$ref": "monomer14381" + }, + { + "$ref": "monomer14382" + }, + { + "$ref": "monomer14383" + }, + { + "$ref": "monomer14384" + }, + { + "$ref": "monomer14385" + }, + { + "$ref": "monomer14386" + }, + { + "$ref": "monomer14387" + }, + { + "$ref": "monomer14388" + }, + { + "$ref": "monomer14389" + }, + { + "$ref": "monomer14390" + }, + { + "$ref": "monomer14391" + }, + { + "$ref": "monomer14392" + }, + { + "$ref": "monomer14393" + }, + { + "$ref": "monomer14394" + }, + { + "$ref": "monomer14395" + }, + { + "$ref": "monomer14396" + }, + { + "$ref": "monomer14397" + }, + { + "$ref": "monomer14398" + }, + { + "$ref": "monomer14399" + }, + { + "$ref": "monomer14400" + }, + { + "$ref": "monomer14401" + }, + { + "$ref": "monomer14402" + }, + { + "$ref": "monomer14403" + }, + { + "$ref": "monomer14404" + }, + { + "$ref": "monomer14405" + }, + { + "$ref": "monomer14406" + }, + { + "$ref": "monomer14407" + }, + { + "$ref": "monomer14408" + }, + { + "$ref": "monomer14409" + }, + { + "$ref": "monomer14410" + }, + { + "$ref": "monomer14411" + }, + { + "$ref": "monomer14412" + }, + { + "$ref": "monomer14609" + }, + { + "$ref": "monomer14610" + }, + { + "$ref": "monomer14611" + }, + { + "$ref": "monomer14612" + }, + { + "$ref": "monomer14613" + }, + { + "$ref": "monomer14614" + }, + { + "$ref": "monomer14615" + }, + { + "$ref": "monomer14616" + }, + { + "$ref": "monomer14617" + }, + { + "$ref": "monomer14618" + }, + { + "$ref": "monomer14619" + }, + { + "$ref": "monomer14620" + }, + { + "$ref": "monomer14621" + }, + { + "$ref": "monomer14622" + }, + { + "$ref": "monomer14623" + }, + { + "$ref": "monomer14624" + }, + { + "$ref": "monomer14625" + }, + { + "$ref": "monomer14626" + }, + { + "$ref": "monomer14627" + }, + { + "$ref": "monomer14628" + }, + { + "$ref": "monomer14629" + }, + { + "$ref": "monomer14630" + }, + { + "$ref": "monomer14631" + }, + { + "$ref": "monomer14632" + }, + { + "$ref": "monomer14633" + }, + { + "$ref": "monomer14634" + }, + { + "$ref": "monomer14635" + }, + { + "$ref": "monomer14636" + }, + { + "$ref": "monomer14637" + }, + { + "$ref": "monomer14638" + }, + { + "$ref": "monomer14639" + }, + { + "$ref": "monomer14640" + }, + { + "$ref": "monomer14641" + }, + { + "$ref": "monomer14642" + }, + { + "$ref": "monomer14643" + }, + { + "$ref": "monomer14644" + }, + { + "$ref": "monomer14645" + }, + { + "$ref": "monomer14646" + }, + { + "$ref": "monomer14647" + }, + { + "$ref": "monomer14648" + }, + { + "$ref": "monomer14649" + }, + { + "$ref": "monomer14650" + }, + { + "$ref": "monomer14651" + }, + { + "$ref": "monomer14652" + }, + { + "$ref": "monomer14653" + }, + { + "$ref": "monomer14654" + }, + { + "$ref": "monomer14655" + }, + { + "$ref": "monomer14672" + } + ], + "connections": [ + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9279", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9276", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9276", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9272", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9261", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9054", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9272", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9261", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9054", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9267", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9681", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9680", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9680", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9679", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9677", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9676", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9679", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9677", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9676", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9678", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9267", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9681", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9727", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9726", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9726", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9725", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9723", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9722", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9725", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9723", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9722", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9724", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9678", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9727", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9797", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9796", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9796", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9795", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9793", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9792", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9795", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9793", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9792", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9794", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9819", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9818", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9818", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9817", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9815", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9814", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9817", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9815", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9814", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9816", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9841", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9840", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9840", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9839", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9837", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9836", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9839", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9837", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9836", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9838", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9724", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9797", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9794", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9819", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9816", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9841", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9869", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9868", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9868", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9867", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9867", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9865", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9838", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9869", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10168", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10167", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10167", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10166", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10164", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10163", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10163", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10165", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10174", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10173", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10173", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10172", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10170", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10169", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10172", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10170", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10169", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10171", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10165", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10174", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10180", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10179", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10179", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10178", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10176", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10175", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10178", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10176", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10175", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10177", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10171", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10180", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10185", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10184", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10184", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10183", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10183", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10181", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10177", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10185", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9866", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer10168", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9865", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9864", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9864", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9866", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer10181", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer11937", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + 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+ "id": "14652", + "position": { + "x": 33.49918859985664, + "y": 24.311271279670006 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14653": { + "type": "monomer", + "id": "14653", + "position": { + "x": 28.797944919928472, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14654": { + "type": "monomer", + "id": "14654", + "position": { + "x": 27.297944919928472, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14655": { + "type": "monomer", + "id": "14655", + "position": { + "x": 25.797944919928465, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14672": { + "type": "monomer", + "id": "14672", + "position": { + "x": 22.797944919928458, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20-expected.mol b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20-expected.mol new file mode 100644 index 0000000000..2f77d45c85 --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20-expected.mol @@ -0,0 +1,1175 @@ + + -INDIGO-07162409052D + + 0 0 0 0 0 0 0 0 0 0 0 V3000 +M V30 BEGIN CTAB +M V30 COUNTS 180 350 0 0 0 +M V30 BEGIN ATOM +M V30 1 (R1,R2,R3,R4,R5) 7.25 -1.25 0.0 0 CLASS=BASE ATTCHORD=(8 2 Al 3 Br 1- +M V30 39 Dx 133 Cx) +M V30 2 (R1,R2,R3,R4,R5) 5.75 -1.25 0.0 0 CLASS=LINKER ATTCHORD=(8 1 Br 4 Al- +M V30 140 Dx 134 Cx) +M V30 3 (R1,R2,R3,R4,R5) 8.75 -1.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 1 Al- +M V30 12 Br 141 Dx 135 Cx) +M V30 4 (R1,R2,R3,R4,R5) 4.25 -1.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(6 5 Al - +M V30 2 Br 142 Dx) +M V30 5 (R1,R2,R3,R4,R5) 2.75 -1.25 0.0 0 CLASS=PHOSPHATE SEQID=1 ATTCHORD=(- +M V30 6 6 Al 4 Br 143 Dx) +M V30 6 (R1,R2,R3,R4,R5) 1.25 -1.25 0.0 0 CLASS=SUGAR SEQID=1 ATTCHORD=(4 5 - +M V30 Br 144 Dx) +M V30 7 (R1,R2,R3,R4,R5) 16.25 -1.25 0.0 0 CLASS=BASE ATTCHORD=(8 8 Al 9 Br - +M V30 145 Dx 139 Cx) +M V30 8 (R1,R2,R3,R4,R5) 14.75 -1.25 0.0 0 CLASS=LINKER ATTCHORD=(8 7 Br 10 - +M V30 Al 146 Dx 140 Cx) +M V30 9 (R1,R2,R3,R4,R5) 17.75 -1.25 0.0 0 CLASS=RNA SEQID=4 ATTCHORD=(8 7 A- +M V30 l 18 Br 147 Dx 141 Cx) +M V30 10 (R1,R2,R3,R4,R5) 13.25 -1.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 11 - +M V30 Al 8 Br 148 Dx 142 Cx) +M V30 11 (R1,R2,R3,R4,R5) 11.75 -1.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 12 Al 10 Br 149 Dx 143 Cx) +M V30 12 (R1,R2,R3,R4,R5) 10.25 -1.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 11 Br 3 Al 150 Dx 144 Cx) +M V30 13 (R1,R2,R3,R4,R5) 2.75 -2.75 0.0 0 CLASS=BASE ATTCHORD=(8 14 Al 15 B- +M V30 r 151 Dx 145 Cx) +M V30 14 (R1,R2,R3,R4,R5) 1.25 -2.75 0.0 0 CLASS=LINKER ATTCHORD=(8 13 Br 16- +M V30 Al 152 Dx 146 Cx) +M V30 15 (R1,R2,R3,R4,R5) 4.25 -2.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 13 - +M V30 Al 24 Br 153 Dx 147 Cx) +M V30 16 (R1,R2,R3,R4,R5) 22.25 -1.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 17 - +M V30 Al 14 Br 154 Dx 148 Cx) +M V30 17 (R1,R2,R3,R4,R5) 20.75 -1.25 0.0 0 CLASS=PHOSPHATE SEQID=5 ATTCHORD- +M V30 =(8 18 Al 16 Br 155 Dx 149 Cx) +M V30 18 (R1,R2,R3,R4,R5) 19.25 -1.25 0.0 0 CLASS=SUGAR SEQID=5 ATTCHORD=(8 - +M V30 17 Br 9 Al 156 Dx 150 Cx) +M V30 19 (R1,R2,R3,R4,R5) 11.75 -2.75 0.0 0 CLASS=BASE ATTCHORD=(8 20 Al 21 - +M V30 Br 157 Dx 151 Cx) +M V30 20 (R1,R2,R3,R4,R5) 10.25 -2.75 0.0 0 CLASS=LINKER ATTCHORD=(8 19 Br 2- +M V30 2 Al 158 Dx 152 Cx) +M V30 21 (R1,R2,R3,R4,R5) 13.25 -2.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 19- +M V30 Al 30 Br 159 Dx 153 Cx) +M V30 22 (R1,R2,R3,R4,R5) 8.75 -2.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 23 A- +M V30 l 20 Br 160 Dx 154 Cx) +M V30 23 (R1,R2,R3,R4,R5) 7.25 -2.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD=- +M V30 (8 24 Al 22 Br 161 Dx 155 Cx) +M V30 24 (R1,R2,R3,R4,R5) 5.75 -2.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 2- +M V30 3 Br 15 Al 162 Dx 156 Cx) +M V30 25 (R1,R2,R3,R4,R5) 20.75 -2.75 0.0 0 CLASS=BASE ATTCHORD=(8 26 Al 27 - +M V30 Br 163 Dx 157 Cx) +M V30 26 (R1,R2,R3,R4,R5) 19.25 -2.75 0.0 0 CLASS=LINKER ATTCHORD=(8 25 Br 2- +M V30 8 Al 164 Dx 158 Cx) +M V30 27 (R1,R2,R3,R4,R5) 22.25 -2.75 0.0 0 CLASS=RNA SEQID=3 ATTCHORD=(8 25- +M V30 Al 36 Br 165 Dx 159 Cx) +M V30 28 (R1,R2,R3,R4,R5) 17.75 -2.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 29 - +M V30 Al 26 Br 166 Dx 160 Cx) +M V30 29 (R1,R2,R3,R4,R5) 16.25 -2.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 30 Al 28 Br 167 Dx 161 Cx) +M V30 30 (R1,R2,R3,R4,R5) 14.75 -2.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 29 Br 21 Al 168 Dx 162 Cx) +M V30 31 (R1,R2,R3,R4,R5) 7.25 -4.25 0.0 0 CLASS=BASE ATTCHORD=(8 32 Al 33 B- +M V30 r 180 Dx 163 Cx) +M V30 32 (R1,R2,R3,R4,R5) 5.75 -4.25 0.0 0 CLASS=LINKER ATTCHORD=(8 31 Br 34- +M V30 Al 169 Dx 164 Cx) +M V30 33 (R1,R2,R3,R4,R5) 8.75 -4.25 0.0 0 CLASS=RNA SEQID=3 ATTCHORD=(8 31 - +M V30 Al 41 Br 170 Dx 165 Cx) +M V30 34 (R1,R2,R3,R4,R5) 4.25 -4.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 35 A- +M V30 l 32 Br 171 Dx 166 Cx) +M V30 35 (R1,R2,R3,R4,R5) 2.75 -4.25 0.0 0 CLASS=PHOSPHATE SEQID=4 ATTCHORD=- +M V30 (8 36 Al 34 Br 172 Dx 167 Cx) +M V30 36 (R1,R2,R3,R4,R5) 1.25 -4.25 0.0 0 CLASS=SUGAR SEQID=4 ATTCHORD=(8 3- +M V30 5 Br 27 Al 173 Dx 168 Cx) +M V30 37 (R1,R2,R3,R4,R5) 14.75 -4.25 0.0 0 CLASS=LINKER ATTCHORD=(8 39 Al 6- +M V30 4 Br 175 Dx 169 Cx) +M V30 38 (R1,R2,R3,R4,R5) 17.75 -4.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 47- +M V30 Br 64 Al 176 Dx 170 Cx) +M V30 39 (R1,R2,R3,R4,R5) 13.25 -4.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 40 - +M V30 Al 37 Br 177 Dx 171 Cx) +M V30 40 (R1,R2,R3,R4,R5) 11.75 -4.25 0.0 0 CLASS=PHOSPHATE SEQID=4 ATTCHORD- +M V30 =(8 41 Al 39 Br 178 Dx 172 Cx) +M V30 41 (R1,R2,R3,R4,R5) 10.25 -4.25 0.0 0 CLASS=SUGAR SEQID=4 ATTCHORD=(8 - +M V30 40 Br 33 Al 179 Dx 173 Cx) +M V30 42 (R1,R2,R3,R4,R5) 2.75 -5.75 0.0 0 CLASS=BASE ATTCHORD=(8 43 Al 44 B- +M V30 r 96 Dx 94 Cx) +M V30 43 (R1,R2,R3,R4,R5) 1.25 -5.75 0.0 0 CLASS=LINKER ATTCHORD=(6 42 Br 45- +M V30 Al 95 Cx) +M V30 44 (R1,R2,R3,R4,R5) 4.25 -5.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 42 - +M V30 Al 53 Br 95 Dx 92 Cx) +M V30 45 (R1,R2,R3,R4,R5) 22.25 -4.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(6 46 - +M V30 Al 43 Br 177 Cx) +M V30 46 (R1,R2,R3,R4,R5) 20.75 -4.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(6 47 Al 45 Br 178 Cx) +M V30 47 (R1,R2,R3,R4,R5) 19.25 -4.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(6 - +M V30 46 Br 38 Al 179 Cx) +M V30 48 (R1,R2,R3,R4,R5) 11.75 -5.75 0.0 0 CLASS=BASE ATTCHORD=(8 49 Al 50 - +M V30 Br 102 Dx 100 Cx) +M V30 49 (R1,R2,R3,R4,R5) 10.25 -5.75 0.0 0 CLASS=LINKER ATTCHORD=(6 48 Br 5- +M V30 1 Al 101 Cx) +M V30 50 (R1,R2,R3,R4,R5) 13.25 -5.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 48- +M V30 Al 59 Br 101 Dx 98 Cx) +M V30 51 (R1,R2,R3,R4,R5) 8.75 -5.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 52 A- +M V30 l 49 Br 91 Dx 102 Cx) +M V30 52 (R1,R2,R3,R4,R5) 7.25 -5.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD=- +M V30 (8 53 Al 51 Br 92 Dx 93 Cx) +M V30 53 (R1,R2,R3,R4,R5) 5.75 -5.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 5- +M V30 2 Br 44 Al 94 Dx 91 Cx) +M V30 54 (R1,R2,R3,R4,R5) 20.75 -5.75 0.0 0 CLASS=BASE ATTCHORD=(8 55 Al 56 - +M V30 Br 107 Dx 105 Cx) +M V30 55 (R1,R2,R3,R4,R5) 19.25 -5.75 0.0 0 CLASS=LINKER ATTCHORD=(8 54 Br 5- +M V30 7 Al 99 Dx 106 Cx) +M V30 56 (R1,R2,R3,R4,R5) 22.25 -5.75 0.0 0 CLASS=RNA SEQID=2 ATTCHORD=(8 54- +M V30 Al 63 Br 106 Dx 103 Cx) +M V30 57 (R1,R2,R3,R4,R5) 17.75 -5.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 58 - +M V30 Al 55 Br 97 Dx 107 Cx) +M V30 58 (R1,R2,R3,R4,R5) 16.25 -5.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 59 Al 57 Br 98 Dx 99 Cx) +M V30 59 (R1,R2,R3,R4,R5) 14.75 -5.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 58 Br 50 Al 100 Dx 97 Cx) +M V30 60 (R1,R2,R3,R4,R5) 5.75 -7.25 0.0 0 CLASS=LINKER ATTCHORD=(8 61 Al 65- +M V30 Br 104 Dx 112 Cx) +M V30 61 (R1,R2,R3,R4,R5) 4.25 -7.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 62 A- +M V30 l 60 Br 130 Dx 113 Cx) +M V30 62 (R1,R2,R3,R4,R5) 2.75 -7.25 0.0 0 CLASS=PHOSPHATE SEQID=3 ATTCHORD=- +M V30 (8 63 Al 61 Br 103 Dx 104 Cx) +M V30 63 (R1,R2,R3,R4,R5) 1.25 -7.25 0.0 0 CLASS=SUGAR SEQID=3 ATTCHORD=(8 6- +M V30 2 Br 56 Al 105 Dx 130 Cx) +M V30 64 (R1,R2,R3,R4,R5) 16.25 -4.25 0.0 0 CLASS=BASE ATTCHORD=(8 37 Al 38 - +M V30 Br 174 Dx 180 Cx) +M V30 65 (R1,R2,R3,R4,R5) 7.25 -7.25 0.0 0 CLASS=BASE ATTCHORD=(8 60 Al 66 B- +M V30 r 113 Dx 111 Cx) +M V30 66 (R1,R2,R3,R4,R5) 8.75 -7.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 65 - +M V30 Al 72 Br 112 Dx 109 Cx) +M V30 67 (R1,R2,R3,R4,R5) 16.25 -7.25 0.0 0 CLASS=BASE ATTCHORD=(8 68 Al 69 - +M V30 Br 119 Dx 117 Cx) +M V30 68 (R1,R2,R3,R4,R5) 14.75 -7.25 0.0 0 CLASS=LINKER ATTCHORD=(8 67 Br 7- +M V30 0 Al 110 Dx 118 Cx) +M V30 69 (R1,R2,R3,R4,R5) 17.75 -7.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 67- +M V30 Al 78 Br 118 Dx 115 Cx) +M V30 70 (R1,R2,R3,R4,R5) 13.25 -7.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 71 - +M V30 Al 68 Br 108 Dx 119 Cx) +M V30 71 (R1,R2,R3,R4,R5) 11.75 -7.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 72 Al 70 Br 109 Dx 110 Cx) +M V30 72 (R1,R2,R3,R4,R5) 10.25 -7.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 71 Br 66 Al 111 Dx 108 Cx) +M V30 73 (R1,R2,R3,R4,R5) 2.75 -8.75 0.0 0 CLASS=BASE ATTCHORD=(8 74 Al 75 B- +M V30 r 125 Dx 123 Cx) +M V30 74 (R1,R2,R3,R4,R5) 1.25 -8.75 0.0 0 CLASS=LINKER ATTCHORD=(8 73 Br 76- +M V30 Al 116 Dx 124 Cx) +M V30 75 (R1,R2,R3,R4,R5) 4.25 -8.75 0.0 0 CLASS=RNA SEQID=2 ATTCHORD=(8 73 - +M V30 Al 84 Br 124 Dx 121 Cx) +M V30 76 (R1,R2,R3,R4,R5) 22.25 -7.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 77 - +M V30 Al 74 Br 114 Dx 125 Cx) +M V30 77 (R1,R2,R3,R4,R5) 20.75 -7.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 78 Al 76 Br 115 Dx 116 Cx) +M V30 78 (R1,R2,R3,R4,R5) 19.25 -7.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 77 Br 69 Al 117 Dx 114 Cx) +M V30 79 (R1,R2,R3,R4,R5) 11.75 -8.75 0.0 0 CLASS=BASE ATTCHORD=(8 80 Al 81 - +M V30 Br 129 Dx 127 Cx) +M V30 80 (R1,R2,R3,R4,R5) 10.25 -8.75 0.0 0 CLASS=LINKER ATTCHORD=(8 79 Br 8- +M V30 2 Al 122 Dx 128 Cx) +M V30 81 (R1,R2,R3,R4,R5) 13.25 -8.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 79- +M V30 Al 90 Br 128 Dx 126 Cx) +M V30 82 (R1,R2,R3,R4,R5) 8.75 -8.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 83 A- +M V30 l 80 Br 120 Dx 129 Cx) +M V30 83 (R1,R2,R3,R4,R5) 7.25 -8.75 0.0 0 CLASS=PHOSPHATE SEQID=3 ATTCHORD=- +M V30 (8 84 Al 82 Br 121 Dx 122 Cx) +M V30 84 (R1,R2,R3,R4,R5) 5.75 -8.75 0.0 0 CLASS=SUGAR SEQID=3 ATTCHORD=(8 8- +M V30 3 Br 75 Al 123 Dx 120 Cx) +M V30 85 (R1,R2,R3,R4,R5) 20.75 -8.75 0.0 0 CLASS=BASE ATTCHORD=(8 86 Al 87 - +M V30 Br 138 Dx 136 Cx) +M V30 86 (R1,R2,R3,R4,R5) 19.25 -8.75 0.0 0 CLASS=LINKER ATTCHORD=(8 85 Br 8- +M V30 8 Al 132 Dx 137 Cx) +M V30 87 (R1,R2,R3,R4,R5) 22.25 -8.75 0.0 0 CLASS=RNA SEQID=2 ATTCHORD=(6 85- +M V30 Al 96 Br 137 Dx) +M V30 88 (R1,R2,R3,R4,R5) 17.75 -8.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 89 - +M V30 Al 86 Br 131 Dx 138 Cx) +M V30 89 (R1,R2,R3,R4,R5) 16.25 -8.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHORD- +M V30 =(8 90 Al 88 Br 126 Dx 132 Cx) +M V30 90 (R1,R2,R3,R4,R5) 14.75 -8.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8 - +M V30 89 Br 81 Al 127 Dx 131 Cx) +M V30 91 (R1,R2,R3,R4,R5) 7.25 -10.25 0.0 0 CLASS=BASE SEQID=2 ATTCHORD=(8 9- +M V30 2 Al 93 Br 51 Dx 53 Cx) +M V30 92 (R1,R2,R3,R4,R5) 5.75 -10.25 0.0 0 CLASS=LINKER ATTCHORD=(8 91 Br 9- +M V30 4 Al 52 Dx 44 Cx) +M V30 93 (R1,R2,R3,R4,R5) 8.75 -10.25 0.0 0 CLASS=RNA SEQID=2 ATTCHORD=(6 91- +M V30 Al 102 Br 52 Cx) +M V30 94 (R1,R2,R3,R4,R5) 4.25 -10.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 95 - +M V30 Al 92 Br 53 Dx 42 Cx) +M V30 95 (R1,R2,R3,R4,R5) 2.75 -10.25 0.0 0 CLASS=PHOSPHATE SEQID=3 ATTCHORD- +M V30 =(8 96 Al 94 Br 44 Dx 43 Cx) +M V30 96 (R1,R2,R3,R4,R5) 1.25 -10.25 0.0 0 CLASS=SUGAR SEQID=3 ATTCHORD=(6 - +M V30 95 Br 87 Al 42 Dx) +M V30 97 (R1,R2,R3,R4,R5) 16.25 -10.25 0.0 0 CLASS=BASE SEQID=2 ATTCHORD=(8 - +M V30 98 Al 99 Br 57 Dx 59 Cx) +M V30 98 (R1,R2,R3,R4,R5) 14.75 -10.25 0.0 0 CLASS=LINKER ATTCHORD=(8 97 Br - +M V30 100 Al 58 Dx 50 Cx) +M V30 99 (R1,R2,R3,R4,R5) 17.75 -10.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 9- +M V30 7 Al 107 Br 55 Dx 58 Cx) +M V30 100 (R1,R2,R3,R4,R5) 13.25 -10.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 01 Al 98 Br 59 Dx 48 Cx) +M V30 101 (R1,R2,R3,R4,R5) 11.75 -10.25 0.0 0 CLASS=PHOSPHATE SEQID=3 ATTCHO- +M V30 RD=(8 102 Al 100 Br 50 Dx 49 Cx) +M V30 102 (R1,R2,R3,R4,R5) 10.25 -10.25 0.0 0 CLASS=SUGAR SEQID=3 ATTCHORD=(- +M V30 8 101 Br 93 Al 48 Dx 51 Cx) +M V30 103 (R1,R2,R3,R4,R5) 1.25 -11.75 0.0 0 CLASS=LINKER ATTCHORD=(8 105 Al- +M V30 130 Br 62 Dx 56 Cx) +M V30 104 (R1,R2,R3,R4,R5) 4.25 -11.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 1- +M V30 13 Br 130 Al 60 Dx 62 Cx) +M V30 105 (R1,R2,R3,R4,R5) 22.25 -10.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 06 Al 103 Br 63 Dx 54 Cx) +M V30 106 (R1,R2,R3,R4,R5) 20.75 -10.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHO- +M V30 RD=(8 107 Al 105 Br 56 Dx 55 Cx) +M V30 107 (R1,R2,R3,R4,R5) 19.25 -10.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(- +M V30 8 106 Br 99 Al 54 Dx 57 Cx) +M V30 108 (R1,R2,R3,R4,R5) 11.75 -11.75 0.0 0 CLASS=BASE SEQID=2 ATTCHORD=(8- +M V30 109 Al 110 Br 70 Dx 72 Cx) +M V30 109 (R1,R2,R3,R4,R5) 10.25 -11.75 0.0 0 CLASS=LINKER ATTCHORD=(8 108 B- +M V30 r 111 Al 71 Dx 66 Cx) +M V30 110 (R1,R2,R3,R4,R5) 13.25 -11.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 - +M V30 108 Al 119 Br 68 Dx 71 Cx) +M V30 111 (R1,R2,R3,R4,R5) 8.75 -11.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 11- +M V30 2 Al 109 Br 72 Dx 65 Cx) +M V30 112 (R1,R2,R3,R4,R5) 7.25 -11.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHOR- +M V30 D=(8 113 Al 111 Br 66 Dx 60 Cx) +M V30 113 (R1,R2,R3,R4,R5) 5.75 -11.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8- +M V30 112 Br 104 Al 65 Dx 61 Cx) +M V30 114 (R1,R2,R3,R4,R5) 20.75 -11.75 0.0 0 CLASS=BASE SEQID=2 ATTCHORD=(8- +M V30 115 Al 116 Br 76 Dx 78 Cx) +M V30 115 (R1,R2,R3,R4,R5) 19.25 -11.75 0.0 0 CLASS=LINKER ATTCHORD=(8 114 B- +M V30 r 117 Al 69 Cx 77 Dx) +M V30 116 (R1,R2,R3,R4,R5) 22.25 -11.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 - +M V30 114 Al 125 Br 74 Dx 77 Cx) +M V30 117 (R1,R2,R3,R4,R5) 17.75 -11.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 18 Al 115 Br 78 Dx 67 Cx) +M V30 118 (R1,R2,R3,R4,R5) 16.25 -11.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHO- +M V30 RD=(8 119 Al 117 Br 69 Dx 68 Cx) +M V30 119 (R1,R2,R3,R4,R5) 14.75 -11.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(- +M V30 8 118 Br 110 Al 67 Dx 70 Cx) +M V30 120 (R1,R2,R3,R4,R5) 7.25 -13.25 0.0 0 CLASS=BASE SEQID=3 ATTCHORD=(8 - +M V30 121 Al 122 Br 82 Dx 84 Cx) +M V30 121 (R1,R2,R3,R4,R5) 5.75 -13.25 0.0 0 CLASS=LINKER ATTCHORD=(8 120 Br- +M V30 123 Al 83 Dx 75 Cx) +M V30 122 (R1,R2,R3,R4,R5) 8.75 -13.25 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 1- +M V30 20 Al 129 Br 80 Dx 83 Cx) +M V30 123 (R1,R2,R3,R4,R5) 4.25 -13.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 12- +M V30 4 Al 121 Br 84 Dx 73 Cx) +M V30 124 (R1,R2,R3,R4,R5) 2.75 -13.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHOR- +M V30 D=(8 125 Al 123 Br 75 Dx 74 Cx) +M V30 125 (R1,R2,R3,R4,R5) 1.25 -13.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8- +M V30 124 Br 116 Al 73 Dx 76 Cx) +M V30 126 (R1,R2,R3,R4,R5) 14.75 -13.25 0.0 0 CLASS=LINKER ATTCHORD=(8 127 A- +M V30 l 131 Br 89 Dx 81 Cx) +M V30 127 (R1,R2,R3,R4,R5) 13.25 -13.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 28 Al 126 Br 90 Dx 79 Cx) +M V30 128 (R1,R2,R3,R4,R5) 11.75 -13.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHO- +M V30 RD=(8 129 Al 127 Br 81 Dx 80 Cx) +M V30 129 (R1,R2,R3,R4,R5) 10.25 -13.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(- +M V30 8 128 Br 122 Al 79 Dx 82 Cx) +M V30 130 (R1,R2,R3,R4,R5) 2.75 -11.75 0.0 0 CLASS=BASE SEQID=3 ATTCHORD=(8 - +M V30 103 Al 104 Br 61 Dx 63 Cx) +M V30 131 (R1,R2,R3,R4,R5) 16.25 -13.25 0.0 0 CLASS=BASE SEQID=2 ATTCHORD=(8- +M V30 126 Al 132 Br 88 Dx 90 Cx) +M V30 132 (R1,R2,R3,R4,R5) 17.75 -13.25 0.0 0 CLASS=RNA SEQID=3 ATTCHORD=(8 - +M V30 131 Al 138 Br 86 Dx 89 Cx) +M V30 133 (R1,R2,R3,R4,R5) 2.75 -14.75 0.0 0 CLASS=BASE ATTCHORD=(6 134 Al 1- +M V30 35 Br 1 Cx) +M V30 134 (R1,R2,R3,R4,R5) 1.25 -14.75 0.0 0 CLASS=LINKER ATTCHORD=(6 133 Br- +M V30 136 Al 2 Cx) +M V30 135 (R1,R2,R3,R4,R5) 4.25 -14.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(6 1- +M V30 33 Al 144 Br 3 Cx) +M V30 136 (R1,R2,R3,R4,R5) 22.25 -13.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(6 1- +M V30 37 Al 134 Br 85 Cx) +M V30 137 (R1,R2,R3,R4,R5) 20.75 -13.25 0.0 0 CLASS=PHOSPHATE SEQID=4 ATTCHO- +M V30 RD=(8 138 Al 136 Br 87 Dx 86 Cx) +M V30 138 (R1,R2,R3,R4,R5) 19.25 -13.25 0.0 0 CLASS=SUGAR SEQID=4 ATTCHORD=(- +M V30 8 137 Br 132 Al 85 Dx 88 Cx) +M V30 139 (R1,R2,R3,R4,R5) 11.75 -14.75 0.0 0 CLASS=BASE ATTCHORD=(8 140 Al - +M V30 141 Br 1 Dx 7 Cx) +M V30 140 (R1,R2,R3,R4,R5) 10.25 -14.75 0.0 0 CLASS=LINKER ATTCHORD=(8 139 B- +M V30 r 142 Al 2 Dx 8 Cx) +M V30 141 (R1,R2,R3,R4,R5) 13.25 -14.75 0.0 0 CLASS=RNA SEQID=2 ATTCHORD=(8 - +M V30 139 Al 150 Br 3 Dx 9 Cx) +M V30 142 (R1,R2,R3,R4,R5) 8.75 -14.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 14- +M V30 3 Al 140 Br 4 Dx 10 Cx) +M V30 143 (R1,R2,R3,R4,R5) 7.25 -14.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHOR- +M V30 D=(8 144 Al 142 Br 5 Dx 11 Cx) +M V30 144 (R1,R2,R3,R4,R5) 5.75 -14.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8- +M V30 143 Br 135 Al 6 Dx 12 Cx) +M V30 145 (R1,R2,R3,R4,R5) 20.75 -14.75 0.0 0 CLASS=BASE ATTCHORD=(8 146 Al - +M V30 147 Br 7 Dx 13 Cx) +M V30 146 (R1,R2,R3,R4,R5) 19.25 -14.75 0.0 0 CLASS=LINKER ATTCHORD=(8 145 B- +M V30 r 148 Al 8 Dx 14 Cx) +M V30 147 (R1,R2,R3,R4,R5) 22.25 -14.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 - +M V30 145 Al 156 Br 9 Dx 15 Cx) +M V30 148 (R1,R2,R3,R4,R5) 17.75 -14.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 49 Al 146 Br 10 Dx 16 Cx) +M V30 149 (R1,R2,R3,R4,R5) 16.25 -14.75 0.0 0 CLASS=PHOSPHATE SEQID=3 ATTCHO- +M V30 RD=(8 150 Al 148 Br 11 Dx 17 Cx) +M V30 150 (R1,R2,R3,R4,R5) 14.75 -14.75 0.0 0 CLASS=SUGAR SEQID=3 ATTCHORD=(- +M V30 8 149 Br 141 Al 12 Dx 18 Cx) +M V30 151 (R1,R2,R3,R4,R5) 7.25 -16.25 0.0 0 CLASS=BASE ATTCHORD=(8 152 Al 1- +M V30 53 Br 13 Dx 19 Cx) +M V30 152 (R1,R2,R3,R4,R5) 5.75 -16.25 0.0 0 CLASS=LINKER ATTCHORD=(8 151 Br- +M V30 154 Al 14 Dx 20 Cx) +M V30 153 (R1,R2,R3,R4,R5) 8.75 -16.25 0.0 0 CLASS=RNA SEQID=4 ATTCHORD=(8 1- +M V30 51 Al 162 Br 15 Dx 21 Cx) +M V30 154 (R1,R2,R3,R4,R5) 4.25 -16.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 15- +M V30 5 Al 152 Br 16 Dx 22 Cx) +M V30 155 (R1,R2,R3,R4,R5) 2.75 -16.25 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHOR- +M V30 D=(8 156 Al 154 Br 17 Dx 23 Cx) +M V30 156 (R1,R2,R3,R4,R5) 1.25 -16.25 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8- +M V30 155 Br 147 Al 18 Dx 24 Cx) +M V30 157 (R1,R2,R3,R4,R5) 16.25 -16.25 0.0 0 CLASS=BASE ATTCHORD=(8 158 Al - +M V30 159 Br 19 Dx 25 Cx) +M V30 158 (R1,R2,R3,R4,R5) 14.75 -16.25 0.0 0 CLASS=LINKER ATTCHORD=(8 157 B- +M V30 r 160 Al 20 Dx 26 Cx) +M V30 159 (R1,R2,R3,R4,R5) 17.75 -16.25 0.0 0 CLASS=RNA SEQID=5 ATTCHORD=(8 - +M V30 157 Al 168 Br 21 Dx 27 Cx) +M V30 160 (R1,R2,R3,R4,R5) 13.25 -16.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 61 Al 158 Br 22 Dx 28 Cx) +M V30 161 (R1,R2,R3,R4,R5) 11.75 -16.25 0.0 0 CLASS=PHOSPHATE SEQID=5 ATTCHO- +M V30 RD=(8 162 Al 160 Br 23 Dx 29 Cx) +M V30 162 (R1,R2,R3,R4,R5) 10.25 -16.25 0.0 0 CLASS=SUGAR SEQID=5 ATTCHORD=(- +M V30 8 161 Br 153 Al 24 Dx 30 Cx) +M V30 163 (R1,R2,R3,R4,R5) 2.75 -17.75 0.0 0 CLASS=BASE ATTCHORD=(8 164 Al 1- +M V30 65 Br 25 Dx 31 Cx) +M V30 164 (R1,R2,R3,R4,R5) 1.25 -17.75 0.0 0 CLASS=LINKER ATTCHORD=(8 163 Br- +M V30 166 Al 26 Dx 32 Cx) +M V30 165 (R1,R2,R3,R4,R5) 4.25 -17.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 1- +M V30 63 Al 173 Br 27 Dx 33 Cx) +M V30 166 (R1,R2,R3,R4,R5) 22.25 -16.25 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 67 Al 164 Br 28 Dx 34 Cx) +M V30 167 (R1,R2,R3,R4,R5) 20.75 -16.25 0.0 0 CLASS=PHOSPHATE SEQID=6 ATTCHO- +M V30 RD=(8 168 Al 166 Br 29 Dx 35 Cx) +M V30 168 (R1,R2,R3,R4,R5) 19.25 -16.25 0.0 0 CLASS=SUGAR SEQID=6 ATTCHORD=(- +M V30 8 167 Br 159 Al 30 Dx 36 Cx) +M V30 169 (R1,R2,R3,R4,R5) 10.25 -17.75 0.0 0 CLASS=LINKER ATTCHORD=(8 171 A- +M V30 l 180 Br 32 Dx 37 Cx) +M V30 170 (R1,R2,R3,R4,R5) 13.25 -17.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(8 - +M V30 179 Br 180 Al 33 Dx 38 Cx) +M V30 171 (R1,R2,R3,R4,R5) 8.75 -17.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 17- +M V30 2 Al 169 Br 34 Dx 39 Cx) +M V30 172 (R1,R2,R3,R4,R5) 7.25 -17.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHOR- +M V30 D=(8 173 Al 171 Br 35 Dx 40 Cx) +M V30 173 (R1,R2,R3,R4,R5) 5.75 -17.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(8- +M V30 172 Br 165 Al 36 Dx 41 Cx) +M V30 174 (R1,R2,R3,R4,R5) 20.75 -17.75 0.0 0 CLASS=BASE ATTCHORD=(6 175 Al - +M V30 176 Br 64 Dx) +M V30 175 (R1,R2,R3,R4,R5) 19.25 -17.75 0.0 0 CLASS=LINKER ATTCHORD=(6 174 B- +M V30 r 177 Al 37 Dx) +M V30 176 (R1,R2,R3,R4,R5) 22.25 -17.75 0.0 0 CLASS=RNA SEQID=1 ATTCHORD=(4 - +M V30 174 Al 38 Dx) +M V30 177 (R1,R2,R3,R4,R5) 17.75 -17.75 0.0 0 CLASS=AA SEQID=1 ATTCHORD=(8 1- +M V30 78 Al 175 Br 39 Dx 45 Cx) +M V30 178 (R1,R2,R3,R4,R5) 16.25 -17.75 0.0 0 CLASS=PHOSPHATE SEQID=2 ATTCHO- +M V30 RD=(8 179 Al 177 Br 40 Dx 46 Cx) +M V30 179 (R1,R2,R3,R4,R5) 14.75 -17.75 0.0 0 CLASS=SUGAR SEQID=2 ATTCHORD=(- +M V30 8 178 Br 170 Al 41 Dx 47 Cx) +M V30 180 (R1,R2,R3,R4,R5) 11.75 -17.75 0.0 0 CLASS=BASE ATTCHORD=(8 169 Al - +M V30 170 Br 31 Dx 64 Cx) +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 1 6 5 +M V30 2 1 5 4 +M V30 3 1 2 1 +M V30 4 1 4 2 +M V30 5 1 1 3 +M V30 6 1 12 11 +M V30 7 1 11 10 +M V30 8 1 8 7 +M V30 9 1 10 8 +M V30 10 1 7 9 +M V30 11 1 3 12 +M V30 12 1 18 17 +M V30 13 1 17 16 +M V30 14 1 14 13 +M V30 15 1 16 14 +M V30 16 1 13 15 +M V30 17 1 9 18 +M V30 18 1 24 23 +M V30 19 1 23 22 +M V30 20 1 20 19 +M V30 21 1 22 20 +M V30 22 1 19 21 +M V30 23 1 30 29 +M V30 24 1 29 28 +M V30 25 1 26 25 +M V30 26 1 28 26 +M V30 27 1 25 27 +M V30 28 1 36 35 +M V30 29 1 35 34 +M V30 30 1 32 31 +M V30 31 1 34 32 +M V30 32 1 31 33 +M V30 33 1 15 24 +M V30 34 1 21 30 +M V30 35 1 27 36 +M V30 36 1 41 40 +M V30 37 1 40 39 +M V30 38 1 39 37 +M V30 39 1 33 41 +M V30 40 1 47 46 +M V30 41 1 46 45 +M V30 42 1 43 42 +M V30 43 1 42 44 +M V30 44 1 53 52 +M V30 45 1 52 51 +M V30 46 1 49 48 +M V30 47 1 51 49 +M V30 48 1 48 50 +M V30 49 1 44 53 +M V30 50 1 59 58 +M V30 51 1 58 57 +M V30 52 1 55 54 +M V30 53 1 57 55 +M V30 54 1 54 56 +M V30 55 1 50 59 +M V30 56 1 63 62 +M V30 57 1 62 61 +M V30 58 1 61 60 +M V30 59 1 56 63 +M V30 60 1 38 47 +M V30 61 1 37 64 +M V30 62 1 64 38 +M V30 63 1 60 65 +M V30 64 1 65 66 +M V30 65 1 72 71 +M V30 66 1 71 70 +M V30 67 1 68 67 +M V30 68 1 70 68 +M V30 69 1 67 69 +M V30 70 1 78 77 +M V30 71 1 77 76 +M V30 72 1 74 73 +M V30 73 1 76 74 +M V30 74 1 73 75 +M V30 75 1 69 78 +M V30 76 1 84 83 +M V30 77 1 83 82 +M V30 78 1 80 79 +M V30 79 1 82 80 +M V30 80 1 79 81 +M V30 81 1 75 84 +M V30 82 1 90 89 +M V30 83 1 89 88 +M V30 84 1 86 85 +M V30 85 1 88 86 +M V30 86 1 85 87 +M V30 87 1 96 95 +M V30 88 1 95 94 +M V30 89 1 92 91 +M V30 90 1 94 92 +M V30 91 1 91 93 +M V30 92 1 102 101 +M V30 93 1 101 100 +M V30 94 1 98 97 +M V30 95 1 100 98 +M V30 96 1 97 99 +M V30 97 1 81 90 +M V30 98 1 87 96 +M V30 99 1 93 102 +M V30 100 1 107 106 +M V30 101 1 106 105 +M V30 102 1 105 103 +M V30 103 1 99 107 +M V30 104 1 113 112 +M V30 105 1 112 111 +M V30 106 1 109 108 +M V30 107 1 111 109 +M V30 108 1 108 110 +M V30 109 1 119 118 +M V30 110 1 118 117 +M V30 111 1 115 114 +M V30 112 1 117 115 +M V30 113 1 114 116 +M V30 114 1 110 119 +M V30 115 1 125 124 +M V30 116 1 124 123 +M V30 117 1 121 120 +M V30 118 1 123 121 +M V30 119 1 120 122 +M V30 120 1 116 125 +M V30 121 1 129 128 +M V30 122 1 128 127 +M V30 123 1 127 126 +M V30 124 1 122 129 +M V30 125 1 104 113 +M V30 126 1 103 130 +M V30 127 1 130 104 +M V30 128 1 126 131 +M V30 129 1 131 132 +M V30 130 1 138 137 +M V30 131 1 137 136 +M V30 132 1 134 133 +M V30 133 1 136 134 +M V30 134 1 133 135 +M V30 135 1 144 143 +M V30 136 1 143 142 +M V30 137 1 140 139 +M V30 138 1 142 140 +M V30 139 1 139 141 +M V30 140 1 135 144 +M V30 141 1 150 149 +M V30 142 1 149 148 +M V30 143 1 146 145 +M V30 144 1 148 146 +M V30 145 1 145 147 +M V30 146 1 141 150 +M V30 147 1 156 155 +M V30 148 1 155 154 +M V30 149 1 152 151 +M V30 150 1 154 152 +M V30 151 1 151 153 +M V30 152 1 162 161 +M V30 153 1 161 160 +M V30 154 1 158 157 +M V30 155 1 160 158 +M V30 156 1 157 159 +M V30 157 1 168 167 +M V30 158 1 167 166 +M V30 159 1 164 163 +M V30 160 1 166 164 +M V30 161 1 163 165 +M V30 162 1 147 156 +M V30 163 1 153 162 +M V30 164 1 159 168 +M V30 165 1 173 172 +M V30 166 1 172 171 +M V30 167 1 171 169 +M V30 168 1 165 173 +M V30 169 1 179 178 +M V30 170 1 178 177 +M V30 171 1 175 174 +M V30 172 1 177 175 +M V30 173 1 174 176 +M V30 174 1 170 179 +M V30 175 1 169 180 +M V30 176 1 180 170 +M V30 177 1 66 72 +M V30 178 1 132 138 +M V30 179 1 45 43 +M V30 180 1 98 58 +M V30 181 1 97 57 +M V30 182 1 99 55 +M V30 183 1 107 54 +M V30 184 1 106 56 +M V30 185 1 105 63 +M V30 186 1 103 62 +M V30 187 1 130 61 +M V30 188 1 104 60 +M V30 189 1 113 65 +M V30 190 1 112 66 +M V30 191 1 111 72 +M V30 192 1 109 71 +M V30 193 1 108 70 +M V30 194 1 110 68 +M V30 195 1 119 67 +M V30 196 1 118 69 +M V30 197 1 117 78 +M V30 198 1 114 76 +M V30 199 1 116 74 +M V30 200 1 125 73 +M V30 201 1 124 75 +M V30 202 1 123 84 +M V30 203 1 121 83 +M V30 204 1 120 82 +M V30 205 1 122 80 +M V30 206 1 129 79 +M V30 207 1 128 81 +M V30 208 1 127 90 +M V30 209 1 126 89 +M V30 210 1 131 88 +M V30 211 1 138 85 +M V30 212 1 132 86 +M V30 213 1 137 87 +M V30 214 1 100 59 +M V30 215 1 101 50 +M V30 216 1 102 48 +M V30 217 1 91 51 +M V30 218 1 92 52 +M V30 219 1 94 53 +M V30 220 1 95 44 +M V30 221 1 96 42 +M V30 222 1 43 95 +M V30 223 1 42 94 +M V30 224 1 92 44 +M V30 225 1 91 53 +M V30 226 1 93 52 +M V30 227 1 102 51 +M V30 228 1 101 49 +M V30 229 1 100 48 +M V30 230 1 98 50 +M V30 231 1 97 59 +M V30 232 1 99 58 +M V30 233 1 107 57 +M V30 234 1 106 55 +M V30 235 1 105 54 +M V30 236 1 103 56 +M V30 237 1 130 63 +M V30 238 1 104 62 +M V30 239 1 113 61 +M V30 240 1 112 60 +M V30 241 1 111 65 +M V30 242 1 109 66 +M V30 243 1 108 72 +M V30 244 1 110 71 +M V30 245 1 119 70 +M V30 246 1 118 68 +M V30 247 1 117 67 +M V30 248 1 115 69 +M V30 249 1 114 78 +M V30 250 1 115 77 +M V30 251 1 116 77 +M V30 252 1 125 76 +M V30 253 1 124 74 +M V30 254 1 123 73 +M V30 255 1 121 75 +M V30 256 1 120 84 +M V30 257 1 122 83 +M V30 258 1 129 82 +M V30 259 1 128 80 +M V30 260 1 127 79 +M V30 261 1 126 81 +M V30 262 1 131 90 +M V30 263 1 132 89 +M V30 264 1 138 88 +M V30 265 1 137 86 +M V30 266 1 136 85 +M V30 267 1 144 6 +M V30 268 1 143 5 +M V30 269 1 142 4 +M V30 270 1 140 2 +M V30 271 1 139 1 +M V30 272 1 141 3 +M V30 273 1 150 12 +M V30 274 1 149 11 +M V30 275 1 148 10 +M V30 276 1 146 8 +M V30 277 1 145 7 +M V30 278 1 147 9 +M V30 279 1 156 18 +M V30 280 1 155 17 +M V30 281 1 154 16 +M V30 282 1 152 14 +M V30 283 1 151 13 +M V30 284 1 153 15 +M V30 285 1 162 24 +M V30 286 1 161 23 +M V30 287 1 160 22 +M V30 288 1 158 20 +M V30 289 1 157 19 +M V30 290 1 159 21 +M V30 291 1 168 30 +M V30 292 1 167 29 +M V30 293 1 166 28 +M V30 294 1 164 26 +M V30 295 1 163 25 +M V30 296 1 165 27 +M V30 297 1 173 36 +M V30 298 1 172 35 +M V30 299 1 171 34 +M V30 300 1 169 32 +M V30 301 1 180 31 +M V30 302 1 170 33 +M V30 303 1 179 41 +M V30 304 1 178 40 +M V30 305 1 177 39 +M V30 306 1 175 37 +M V30 307 1 174 64 +M V30 308 1 176 38 +M V30 309 1 177 45 +M V30 310 1 178 46 +M V30 311 1 179 47 +M V30 312 1 170 38 +M V30 313 1 180 64 +M V30 314 1 169 37 +M V30 315 1 171 39 +M V30 316 1 172 40 +M V30 317 1 173 41 +M V30 318 1 165 33 +M V30 319 1 163 31 +M V30 320 1 164 32 +M V30 321 1 166 34 +M V30 322 1 167 35 +M V30 323 1 168 36 +M V30 324 1 159 27 +M V30 325 1 157 25 +M V30 326 1 158 26 +M V30 327 1 160 28 +M V30 328 1 161 29 +M V30 329 1 162 30 +M V30 330 1 153 21 +M V30 331 1 151 19 +M V30 332 1 152 20 +M V30 333 1 154 22 +M V30 334 1 155 23 +M V30 335 1 156 24 +M V30 336 1 147 15 +M V30 337 1 145 13 +M V30 338 1 146 14 +M V30 339 1 148 16 +M V30 340 1 149 17 +M V30 341 1 150 18 +M V30 342 1 141 9 +M V30 343 1 139 7 +M V30 344 1 140 8 +M V30 345 1 142 10 +M V30 346 1 143 11 +M V30 347 1 144 12 +M V30 348 1 135 3 +M V30 349 1 133 1 +M V30 350 1 134 2 +M V30 END BOND +M V30 END CTAB +M V30 BEGIN TEMPLATE +M V30 TEMPLATE 1 BASE/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5) NATREPLACE=BASE/G +M V30 BEGIN CTAB +M V30 COUNTS 23 23 6 0 0 +M V30 BEGIN ATOM +M V30 1 C 1.34758 0.228207 0.0 0 +M V30 2 C 2.10385 -0.426422 0.0 0 +M V30 3 C 3.0492 -0.099374 0.0 0 +M V30 4 C 3.80547 -0.754002 0.0 0 +M V30 5 C 4.75082 -0.426955 0.0 0 +M V30 6 C 5.50709 -1.08158 0.0 0 +M V30 7 N 6.45244 -0.754536 0.0 0 +M V30 8 H 7.20831 -1.40883 0.0 0 +M V30 9 H 6.64139 0.22714 0.0 0 +M V30 10 C -3.1883 -0.425755 0.0 0 +M V30 11 C -3.00101 0.556321 0.0 0 +M V30 12 C -3.75782 1.20955 0.0 0 +M V30 13 N -4.70197 0.880702 0.0 0 +M V30 14 C -4.88925 -0.101307 0.0 0 +M V30 15 O -5.83334 -0.430154 0.0 0 +M V30 16 O -3.57053 2.19156 0.0 0 +M V30 17 N -4.13238 -0.754536 0.0 0 +M V30 18 C -2.05566 0.883368 0.0 0 +M V30 19 H -4.31967 -1.73661 0.0 0 +M V30 20 C -1.29939 0.22874 0.0 0 +M V30 21 C -0.354041 0.555788 0.0 0 +M V30 22 N 0.402228 -0.0988408 0.0 0 +M V30 23 O -0.16509 1.53753 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 1 22 1 +M V30 2 1 1 2 +M V30 3 1 2 3 +M V30 4 1 3 4 +M V30 5 1 4 5 +M V30 6 1 5 6 +M V30 7 1 6 7 +M V30 8 1 7 8 +M V30 9 1 7 9 +M V30 10 2 10 11 +M V30 11 1 11 12 +M V30 12 1 12 13 +M V30 13 1 13 14 +M V30 14 2 14 15 +M V30 15 2 12 16 +M V30 16 1 17 10 +M V30 17 1 17 14 +M V30 18 1 11 18 +M V30 19 1 17 19 +M V30 20 2 18 20 +M V30 21 1 20 21 +M V30 22 1 21 22 +M V30 23 2 21 23 +M V30 END BOND +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 19) XBONDS=(1 19) BRKXYZ=(9 0.093642 0.491038 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS- +M V30 =LGRP +M V30 2 SUP 2 ATOMS=(1 8) XBONDS=(1 8) BRKXYZ=(9 -0.377934 0.327148 0.000000- +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS=- +M V30 LGRP +M V30 3 SUP 3 ATOMS=(1 9) XBONDS=(1 9) BRKXYZ=(9 -0.094475 -0.490838 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS- +M V30 =LGRP +M V30 4 SUP 4 ATOMS=(1 6) XBONDS=(2 6 7) BRKXYZ=(9 -0.378134 0.327314 0.0000- +M V30 00 0.472676 0.163524 0.000000 0.000000 0.000000 0.000000) LABEL=CH2 CL- +M V30 ASS=LGRP +M V30 5 SUP 5 ATOMS=(1 4) XBONDS=(2 4 5) BRKXYZ=(9 -0.378134 0.327314 0.0000- +M V30 00 0.472676 0.163524 0.000000 0.000000 0.000000 0.000000) LABEL=CH2 CL- +M V30 ASS=LGRP +M V30 6 SUP 6 ATOMS=(18 1 2 3 5 7 10 11 12 13 14 15 16 17 18 20 21 22 23) XB- +M V30 ONDS=(7 4 5 6 7 8 9 19) BRKXYZ=(9 0.378134 -0.327314 0.000000 -0.47267- +M V30 6 -0.163524 0.000000 0.000000 0.000000 0.000000) BRKXYZ=(9 0.378134 -0- +M V30 .327314 0.000000 -0.472676 -0.163524 0.000000 0.000000 0.000000 0.0000- +M V30 00) BRKXYZ=(9 0.377934 -0.327148 0.000000 0.094475 0.490838 0.000000 0- +M V30 .000000 0.000000 0.000000) BRKXYZ=(9 -0.093642 -0.491038 0.000000 0.00- +M V30 0000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=(R1,R2,R3,R4,- +M V30 R5) CLASS=BASE SAP=(3 17 19 Al) SAP=(3 7 8 Br) SAP=(3 7 9 Cx) SAP=(3 5- +M V30 6 Dx) SAP=(3 3 4 Ex) NATREPLACE=BASE/G +M V30 END SGROUP +M V30 END CTAB +M V30 TEMPLATE 2 LINKER/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5) +M V30 BEGIN CTAB +M V30 COUNTS 22 21 6 0 0 +M V30 BEGIN ATOM +M V30 1 N 12.0838 -6.55002 0.0 0 +M V30 2 C 11.1373 -6.10322 0.0 0 +M V30 3 C 10.2767 -6.69892 0.0 0 +M V30 4 C 9.33033 -6.25222 0.0 0 +M V30 5 C 8.46973 -6.84782 0.0 0 +M V30 6 C 7.52333 -6.40112 0.0 0 +M V30 7 C 6.66272 -6.99682 0.0 0 +M V30 8 O 5.71622 -6.55002 0.0 0 +M V30 9 I 12.7718 -6.07362 0.0 0 +M V30 10 H 5.02822 -7.02642 0.0 0 +M V30 11 C 7.02332 -5.53512 0.0 0 +M V30 12 C 7.02332 -4.53512 0.0 0 +M V30 13 C 6.31622 -3.82801 0.0 0 +M V30 14 C 6.57502 -2.86211 0.0 0 +M V30 15 C 5.60912 -2.60321 0.0 0 +M V30 16 C 5.86792 -1.63731 0.0 0 +M V30 17 Br 4.86792 -1.63731 0.0 0 +M V30 18 O 10.2767 -7.69893 0.0 0 +M V30 19 Cl 7.57503 -2.86211 0.0 0 +M V30 20 C 8.46973 -7.84783 0.0 0 +M V30 21 C 7.96973 -8.71393 0.0 0 +M V30 22 H 7.96973 -9.71393 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 1 1 2 +M V30 2 1 2 3 +M V30 3 1 3 4 +M V30 4 1 4 5 +M V30 5 1 5 6 +M V30 6 1 6 7 +M V30 7 1 7 8 +M V30 8 1 1 9 +M V30 9 1 8 10 +M V30 10 1 6 11 +M V30 11 1 11 12 +M V30 12 1 12 13 +M V30 13 1 13 14 +M V30 14 1 14 15 +M V30 15 1 15 16 +M V30 16 1 16 17 +M V30 17 1 3 18 +M V30 18 1 14 19 +M V30 19 1 5 20 +M V30 20 1 20 21 +M V30 21 1 21 22 +M V30 END BOND +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 10) XBONDS=(1 9) BRKXYZ=(9 0.344001 0.238201 0.000000- +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS=- +M V30 LGRP +M V30 2 SUP 2 ATOMS=(1 9) XBONDS=(1 8) BRKXYZ=(9 -0.344001 -0.238201 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=I CLASS- +M V30 =LGRP +M V30 3 SUP 3 ATOMS=(1 17) XBONDS=(1 16) BRKXYZ=(9 0.500002 0.000000 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=Br CLAS- +M V30 S=LGRP +M V30 4 SUP 4 ATOMS=(1 19) XBONDS=(1 18) BRKXYZ=(9 -0.500002 0.000000 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=Cl CLA- +M V30 SS=LGRP +M V30 5 SUP 5 ATOMS=(1 18) XBONDS=(1 17) BRKXYZ=(9 0.000000 0.500002 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLAS- +M V30 S=LGRP +M V30 6 SUP 6 ATOMS=(17 1 2 3 4 5 6 7 8 11 12 13 14 15 16 20 21 22) XBONDS=(- +M V30 5 8 17 9 18 16) BRKXYZ=(9 0.344001 0.238201 0.000000 0.000000 -0.50000- +M V30 2 0.000000 0.000000 0.000000 0.000000) BRKXYZ=(9 -0.344001 -0.238201 0- +M V30 .000000 0.500002 0.000000 0.000000 0.000000 0.000000 0.000000) BRKXYZ=- +M V30 (9 -0.500002 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.0- +M V30 00000 0.000000) LABEL=(R1,R2,R3,R4,R5) CLASS=LINKER SAP=(3 8 10 Al) SA- +M V30 P=(3 1 9 Br) SAP=(3 16 17 Cx) SAP=(3 14 19 Dx) SAP=(3 3 18 Ex) +M V30 END SGROUP +M V30 END CTAB +M V30 TEMPLATE 3 RNA/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5) NATREPLACE=RNA/A +M V30 BEGIN CTAB +M V30 COUNTS 24 26 6 0 0 +M V30 BEGIN ATOM +M V30 1 N 23.3916 -9.19652 0.0 0 +M V30 2 C 22.1765 -7.98144 0.0 0 +M V30 3 C 23.1348 -8.23821 0.0 0 +M V30 4 C 21.475 -8.68296 0.0 0 +M V30 5 C 22.69 -9.89804 0.0 0 +M V30 6 N 21.7317 -9.64127 0.0 0 +M V30 7 N 21.7261 -7.09746 0.0 0 +M V30 8 N 20.591 -8.23256 0.0 0 +M V30 9 C 20.7462 -7.25266 0.0 0 +M V30 10 C 19.707 -8.68296 0.0 0 CFG=2 +M V30 11 O 18.823 -8.23255 0.0 0 +M V30 12 C 18.1215 -8.93408 0.0 0 CFG=1 +M V30 13 C 18.5719 -9.81806 0.0 0 CFG=2 +M V30 14 C 19.5518 -9.66286 0.0 0 +M V30 15 C 17.1416 -8.77888 0.0 0 +M V30 16 O 16.7861 -7.85267 0.0 0 +M V30 17 O 18.1215 -10.702 0.0 0 +M V30 18 P 17.1308 -10.754 0.0 0 +M V30 19 O 17.6711 -11.586 0.0 0 +M V30 20 O 16.4376 -11.5996 0.0 0 +M V30 21 N 23.8363 -7.53669 0.0 0 +M V30 22 N 22.9468 -10.8563 0.0 0 +M V30 23 H 15.8062 -7.69747 0.0 0 +M V30 24 H 16.0355 -10.7946 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 2 3 1 +M V30 2 1 1 5 +M V30 3 2 5 6 +M V30 4 1 6 4 +M V30 5 2 4 2 +M V30 6 1 2 3 +M V30 7 1 2 7 +M V30 8 1 4 8 +M V30 9 2 7 9 +M V30 10 1 10 11 +M V30 11 1 11 12 +M V30 12 1 12 13 +M V30 13 1 13 14 +M V30 14 1 10 14 +M V30 15 1 12 15 CFG=1 +M V30 16 1 15 16 +M V30 17 1 10 8 CFG=1 +M V30 18 1 13 17 CFG=3 +M V30 19 1 17 18 +M V30 20 2 18 19 +M V30 21 1 18 20 +M V30 22 1 8 9 +M V30 23 1 3 21 +M V30 24 1 5 22 +M V30 25 1 16 23 +M V30 26 1 18 24 +M V30 END BOND +M V30 BEGIN COLLECTION +M V30 MDLV30/STEABS ATOMS=(3 10 12 13) +M V30 END COLLECTION +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 23) XBONDS=(1 25) BRKXYZ=(9 0.489946 -0.077600 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLAS- +M V30 S=LGRP +M V30 2 SUP 2 ATOMS=(1 24) XBONDS=(1 26) BRKXYZ=(9 0.547639 0.020341 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS- +M V30 =LGRP +M V30 3 SUP 3 ATOMS=(1 22) XBONDS=(1 24) BRKXYZ=(9 -0.128388 0.479152 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=NH2 CL- +M V30 ASS=LGRP +M V30 4 SUP 4 ATOMS=(1 21) XBONDS=(1 23) BRKXYZ=(9 -0.350763 -0.350763 0.000- +M V30 000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=NH2 C- +M V30 LASS=LGRP +M V30 5 SUP 5 ATOMS=(1 20) XBONDS=(1 21) BRKXYZ=(9 0.346558 0.422804 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLAS- +M V30 S=LGRP +M V30 6 SUP 6 ATOMS=(19 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19) XBO- +M V30 NDS=(5 23 24 25 21 26) BRKXYZ=(9 0.350763 0.350763 0.000000 0.128388 -- +M V30 0.479152 0.000000 0.000000 0.000000 0.000000) BRKXYZ=(9 -0.489946 0.07- +M V30 7600 0.000000 -0.346558 -0.422804 0.000000 0.000000 0.000000 0.000000)- +M V30 BRKXYZ=(9 -0.547639 -0.020341 0.000000 0.000000 0.000000 0.000000 0.0- +M V30 00000 0.000000 0.000000) LABEL=(R1,R2,R3,R4,R5) CLASS=RNA SAP=(3 16 23- +M V30 Al) SAP=(3 18 24 Br) SAP=(3 14 22 Cx) SAP=(3 12 21 Dx) SAP=(3 10 20 E- +M V30 x) NATREPLACE=RNA/A +M V30 END SGROUP +M V30 END CTAB +M V30 TEMPLATE 4 AA/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5)/ NATREPLACE=AA/F +M V30 BEGIN CTAB +M V30 COUNTS 23 22 6 0 0 +M V30 BEGIN ATOM +M V30 1 C 12.6705 -7.88486 0.0 0 +M V30 2 C 12.6698 -8.97607 0.0 0 CFG=1 +M V30 3 C 13.6141 -9.52271 0.0 0 +M V30 4 O 13.6136 -10.3951 0.0 0 +M V30 5 O 14.3701 -9.08714 0.0 0 +M V30 6 N 11.7255 -9.52271 0.0 0 +M V30 7 C 11.7261 -7.33822 0.0 0 +M V30 8 C 11.7267 -6.24702 0.0 0 +M V30 9 C 10.7825 -5.70038 0.0 0 +M V30 10 N 10.0265 -6.13594 0.0 0 +M V30 11 O 10.7829 -4.82795 0.0 0 +M V30 12 H 10.9691 -9.08793 0.0 0 +M V30 13 C 12.6846 -5.74242 0.0 0 +M V30 14 C 13.6427 -6.24702 0.0 0 +M V30 15 C 14.6344 -6.24702 0.0 0 +M V30 16 F 15.1303 -5.38818 0.0 0 +M V30 17 Cl 12.6846 -4.75069 0.0 0 +M V30 18 C 15.4932 -6.74288 0.0 0 +M V30 19 C 15.4932 -7.73462 0.0 0 +M V30 20 C 16.3521 -8.23048 0.0 0 +M V30 21 C 14.6344 -8.23048 0.0 0 +M V30 22 C 16.3521 -9.22221 0.0 0 +M V30 23 Br 17.2109 -9.71808 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 1 2 1 CFG=1 +M V30 2 1 2 3 +M V30 3 2 3 4 +M V30 4 1 3 5 +M V30 5 1 2 6 +M V30 6 1 1 7 +M V30 7 1 7 8 +M V30 8 1 8 9 +M V30 9 1 9 10 +M V30 10 2 9 11 +M V30 11 1 6 12 +M V30 12 1 8 13 +M V30 13 1 13 14 +M V30 14 1 14 15 +M V30 15 1 15 16 +M V30 16 1 13 17 +M V30 17 1 15 18 +M V30 18 1 18 19 +M V30 19 1 19 20 +M V30 20 1 19 21 +M V30 21 1 20 22 +M V30 22 1 22 23 +M V30 END BOND +M V30 BEGIN COLLECTION +M V30 MDLV30/STEABS ATOMS=(1 2) +M V30 END COLLECTION +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 12) XBONDS=(1 11) BRKXYZ=(9 0.378197 -0.217388 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLAS- +M V30 S=LGRP +M V30 2 SUP 2 ATOMS=(1 5) XBONDS=(1 4) BRKXYZ=(9 -0.377998 -0.217784 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLAS- +M V30 S=LGRP +M V30 3 SUP 3 ATOMS=(1 10) XBONDS=(1 9) BRKXYZ=(9 0.377999 0.217784 0.000000- +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=NH2 CLAS- +M V30 S=LGRP +M V30 4 SUP 4 ATOMS=(1 17) XBONDS=(1 16) BRKXYZ=(9 0.000000 -0.495866 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=Cl CLA- +M V30 SS=LGRP +M V30 5 SUP 5 ATOMS=(1 16) XBONDS=(1 15) BRKXYZ=(9 -0.247933 -0.429420 0.000- +M V30 000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=F CLA- +M V30 SS=LGRP +M V30 6 SUP 6 ATOMS=(18 1 2 3 4 6 7 8 9 11 13 14 15 18 19 20 21 22 23) XBOND- +M V30 S=(5 4 11 9 16 15) BRKXYZ=(9 0.377998 0.217784 0.000000 -0.378197 0.21- +M V30 7388 0.000000 0.000000 0.000000 0.000000) BRKXYZ=(9 -0.377999 -0.21778- +M V30 4 0.000000 0.000000 0.495866 0.000000 0.000000 0.000000 0.000000) BRKX- +M V30 YZ=(9 0.247933 0.429420 0.000000 0.000000 0.000000 0.000000 0.000000 0- +M V30 .000000 0.000000) LABEL=(R1,R2,R3,R4,R5) CLASS=AA SAP=(3 6 12 Al) SAP=- +M V30 (3 3 5 Br) SAP=(3 9 10 Cx) SAP=(3 13 17 Dx) SAP=(3 15 16 Ex) NATREPLAC- +M V30 E=AA/F +M V30 END SGROUP +M V30 END CTAB +M V30 TEMPLATE 5 PHOSPHATE/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5) NATREPLACE=PHOS- +M V30 PHATE/P +M V30 BEGIN CTAB +M V30 COUNTS 13 12 6 0 0 +M V30 BEGIN ATOM +M V30 1 P 8.52499 -7.04999 0.0 0 +M V30 2 O 9.02478 -7.91619 0.0 0 +M V30 3 Cl 9.52498 -7.04999 0.0 0 +M V30 4 O 9.02478 -6.18379 0.0 0 +M V30 5 P 7.52499 -7.04999 0.0 0 +M V30 6 P 6.52499 -7.04999 0.0 0 +M V30 7 P 5.52499 -7.04999 0.0 0 +M V30 8 P 4.52499 -7.04999 0.0 0 +M V30 9 O 7.78379 -8.01589 0.0 0 +M V30 10 H 6.52499 -8.04999 0.0 0 +M V30 11 O 5.52499 -8.04999 0.0 0 +M V30 12 H 4.26619 -8.01589 0.0 0 +M V30 13 O 3.65899 -6.54999 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 2 1 2 +M V30 2 1 1 3 +M V30 3 1 1 4 +M V30 4 1 1 5 +M V30 5 1 5 6 +M V30 6 1 6 7 +M V30 7 1 7 8 +M V30 8 1 5 9 +M V30 9 1 6 10 +M V30 10 1 7 11 +M V30 11 1 8 12 +M V30 12 1 8 13 +M V30 END BOND +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 13) XBONDS=(1 12) BRKXYZ=(9 0.432999 -0.250000 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLA- +M V30 SS=LGRP +M V30 2 SUP 2 ATOMS=(1 3) XBONDS=(1 2) BRKXYZ=(9 -0.499999 0.000000 0.000000- +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=Cl CLASS- +M V30 =LGRP +M V30 3 SUP 3 ATOMS=(1 12) XBONDS=(1 11) BRKXYZ=(9 0.129400 0.482949 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS- +M V30 =LGRP +M V30 4 SUP 4 ATOMS=(1 11) XBONDS=(1 10) BRKXYZ=(9 0.000000 0.499999 0.00000- +M V30 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLAS- +M V30 S=LGRP +M V30 5 SUP 5 ATOMS=(1 10) XBONDS=(1 9) BRKXYZ=(9 0.000000 0.499999 0.000000- +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLASS=- +M V30 LGRP +M V30 6 SUP 6 ATOMS=(8 1 2 4 5 6 7 8 9) XBONDS=(5 2 9 10 11 12) BRKXYZ=(9 0.- +M V30 499999 0.000000 0.000000 0.000000 -0.499999 0.000000 0.000000 0.000000- +M V30 0.000000) BRKXYZ=(9 0.000000 -0.499999 0.000000 -0.129400 -0.482949 0- +M V30 .000000 0.000000 0.000000 0.000000) BRKXYZ=(9 -0.432999 0.250000 0.000- +M V30 000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=(R1,R- +M V30 2,R3,R4,R5) CLASS=PHOSPHATE SAP=(3 8 13 Al) SAP=(3 1 3 Br) SAP=(3 8 12- +M V30 Cx) SAP=(3 7 11 Dx) SAP=(3 6 10 Ex) NATREPLACE=PHOSPHATE/P +M V30 END SGROUP +M V30 END CTAB +M V30 TEMPLATE 6 SUGAR/(R1,R2,R3,R4,R5)/(R1,R2,R3,R4,R5) NATREPLACE=SUGAR/R +M V30 BEGIN CTAB +M V30 COUNTS 17 17 6 0 0 +M V30 BEGIN ATOM +M V30 1 O -1.78636 0.263199 0.0 0 +M V30 2 C -1.42808 1.2496 0.0 0 CFG=1 +M V30 3 C -0.958907 -0.382276 0.0 0 CFG=2 +M V30 4 C -0.379267 1.21378 0.0 0 CFG=2 +M V30 5 C -0.0892723 0.20513 0.0 0 CFG=1 +M V30 6 O 0.263759 2.04151 0.0 0 +M V30 7 O 0.895171 -0.154757 0.0 0 +M V30 8 C -2.01667 2.11693 0.0 0 +M V30 9 O -0.987662 -1.22141 0.0 0 +M V30 10 O -3.06394 2.04151 0.0 0 +M V30 11 H -3.53535 2.73617 0.0 0 +M V30 12 H 1.09554 1.92747 0.0 0 +M V30 13 C 1.07679 -1.18894 0.0 0 +M V30 14 O 2.06299 -1.54939 0.0 0 +M V30 15 C 2.24454 -2.58365 0.0 0 +M V30 16 C 3.23066 -2.9441 0.0 0 +M V30 17 O 3.37591 -3.77098 0.0 0 +M V30 END ATOM +M V30 BEGIN BOND +M V30 1 1 1 2 +M V30 2 1 1 3 +M V30 3 1 2 4 +M V30 4 1 2 8 CFG=3 +M V30 5 1 3 5 +M V30 6 1 3 9 CFG=3 +M V30 7 1 4 5 +M V30 8 1 4 6 CFG=1 +M V30 9 1 5 7 CFG=1 +M V30 10 1 6 12 +M V30 11 1 8 10 +M V30 12 1 10 11 +M V30 13 1 7 13 +M V30 14 1 13 14 +M V30 15 1 14 15 +M V30 16 1 15 16 +M V30 17 1 16 17 +M V30 END BOND +M V30 BEGIN COLLECTION +M V30 MDLV30/STEABS ATOMS=(4 2 3 4 5) +M V30 END COLLECTION +M V30 BEGIN SGROUP +M V30 1 SUP 1 ATOMS=(1 11) XBONDS=(1 12) BRKXYZ=(9 0.235704 -0.347329 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLAS- +M V30 S=LGRP +M V30 2 SUP 2 ATOMS=(1 12) XBONDS=(1 10) BRKXYZ=(9 -0.415893 0.057020 0.0000- +M V30 00 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=H CLAS- +M V30 S=LGRP +M V30 3 SUP 3 ATOMS=(1 9) XBONDS=(1 6) BRKXYZ=(9 0.014377 0.419566 0.000000 - +M V30 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000) LABEL=OH CLASS=- +M V30 LGRP +M V30 4 SUP 4 ATOMS=(1 13) XBONDS=(2 13 14) BRKXYZ=(9 -0.090811 0.517094 0.0- +M V30 00000 0.493096 -0.180224 0.000000 0.000000 0.000000 0.000000) LABEL=CH- +M V30 2 CLASS=LGRP +M V30 5 SUP 5 ATOMS=(1 16) XBONDS=(2 16 17) BRKXYZ=(9 -0.493061 0.180224 0.0- +M V30 00000 0.072621 -0.413444 0.000000 0.000000 0.000000 0.000000) LABEL=CH- +M V30 2 CLASS=LGRP +M V30 6 SUP 6 ATOMS=(12 1 2 3 4 5 6 7 8 10 14 15 17) XBONDS=(7 6 10 13 12 14- +M V30 16 17) BRKXYZ=(9 -0.014377 -0.419566 0.000000 0.415893 -0.057020 0.00- +M V30 0000 0.000000 0.000000 0.000000) BRKXYZ=(9 0.090811 -0.517094 0.000000- +M V30 -0.235704 0.347329 0.000000 0.000000 0.000000 0.000000) BRKXYZ=(9 -0.- +M V30 493096 0.180224 0.000000 0.493061 -0.180224 0.000000 0.000000 0.000000- +M V30 0.000000) BRKXYZ=(9 -0.072621 0.413444 0.000000 0.000000 0.000000 0.0- +M V30 00000 0.000000 0.000000 0.000000) LABEL=(R1,R2,R3,R4,R5) CLASS=SUGAR S- +M V30 AP=(3 10 11 Al) SAP=(3 6 12 Br) SAP=(3 3 9 Cx) SAP=(3 7 13 Dx) SAP=(3 - +M V30 14 16 Ex) NATREPLACE=SUGAR/R +M V30 END SGROUP +M V30 END CTAB +M V30 END TEMPLATE +M END diff --git a/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20.ket b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20.ket new file mode 100644 index 0000000000..e0045f38de --- /dev/null +++ b/ketcher-autotests/tests/test-data/KET/Side-Chain-Connections/20.ket @@ -0,0 +1,8418 @@ +{ + "root": { + "nodes": [ + { + "$ref": "monomer9054" + }, + { + "$ref": "monomer9261" + }, + { + "$ref": "monomer9267" + }, + { + "$ref": "monomer9272" + }, + { + "$ref": "monomer9276" + }, + { + "$ref": "monomer9279" + }, + { + "$ref": "monomer9676" + }, + { + "$ref": "monomer9677" + }, + { + "$ref": "monomer9678" + }, + { + "$ref": "monomer9679" + }, + { + "$ref": "monomer9680" + }, + { + "$ref": "monomer9681" + }, + { + "$ref": "monomer9722" + }, + { + "$ref": "monomer9723" + }, + { + "$ref": "monomer9724" + }, + { + "$ref": "monomer9725" + }, + { + "$ref": "monomer9726" + }, + { + "$ref": "monomer9727" + }, + { + "$ref": "monomer9792" + }, + { + "$ref": "monomer9793" + }, + { + "$ref": "monomer9794" + }, + { + "$ref": "monomer9795" + }, + { + "$ref": "monomer9796" + }, + { + "$ref": "monomer9797" + }, + { + "$ref": "monomer9814" + }, + { + "$ref": "monomer9815" + }, + { + "$ref": "monomer9816" + }, + { + "$ref": "monomer9817" + }, + { + "$ref": "monomer9818" + }, + { + "$ref": "monomer9819" + }, + { + "$ref": "monomer9836" + }, + { + "$ref": "monomer9837" + }, + { + "$ref": "monomer9838" + }, + { + "$ref": "monomer9839" + }, + { + "$ref": "monomer9840" + }, + { + "$ref": "monomer9841" + }, + { + "$ref": "monomer9865" + }, + { + "$ref": "monomer9866" + }, + { + "$ref": "monomer9867" + }, + { + "$ref": "monomer9868" + }, + { + "$ref": "monomer9869" + }, + { + "$ref": "monomer10163" + }, + { + "$ref": "monomer10164" + }, + { + "$ref": "monomer10165" + }, + { + "$ref": "monomer10166" + }, + { + "$ref": "monomer10167" + }, + { + "$ref": "monomer10168" + }, + { + "$ref": 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"$ref": "monomer14387" + }, + { + "$ref": "monomer14388" + }, + { + "$ref": "monomer14389" + }, + { + "$ref": "monomer14390" + }, + { + "$ref": "monomer14391" + }, + { + "$ref": "monomer14392" + }, + { + "$ref": "monomer14393" + }, + { + "$ref": "monomer14394" + }, + { + "$ref": "monomer14395" + }, + { + "$ref": "monomer14396" + }, + { + "$ref": "monomer14397" + }, + { + "$ref": "monomer14398" + }, + { + "$ref": "monomer14399" + }, + { + "$ref": "monomer14400" + }, + { + "$ref": "monomer14401" + }, + { + "$ref": "monomer14402" + }, + { + "$ref": "monomer14403" + }, + { + "$ref": "monomer14404" + }, + { + "$ref": "monomer14405" + }, + { + "$ref": "monomer14406" + }, + { + "$ref": "monomer14407" + }, + { + "$ref": "monomer14408" + }, + { + "$ref": "monomer14409" + }, + { + "$ref": "monomer14410" + }, + { + "$ref": "monomer14411" + }, + { + "$ref": "monomer14412" + }, + { + "$ref": "monomer14609" + }, + { + "$ref": "monomer14610" + }, + { + "$ref": "monomer14611" + }, + { + "$ref": 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"monomer9726", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9725", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9723", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9722", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9725", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9723", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9722", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9724", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9678", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9727", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": 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"monomer9841", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9840", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9840", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9839", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9837", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9836", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9839", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9837", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9836", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9838", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9724", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9797", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9794", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9819", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9816", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9841", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9869", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9868", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": "monomer9868", + "attachmentPointId": "R2" + }, + "endpoint2": { + "monomerId": "monomer9867", + "attachmentPointId": "R1" + } + }, + { + "connectionType": "single", + "endpoint1": { + "monomerId": 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"alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14409": { + "type": "monomer", + "id": "14409", + "position": { + "x": 21.10092907104316, + "y": 26.08103549909251 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14410": { + "type": "monomer", + "id": "14410", + "position": { + "x": -8.981259533345238, + "y": 25.953949466715798 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14411": { + "type": "monomer", + "id": "14411", + "position": { + "x": 27.100929071043154, + "y": 26.08103549909251 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14412": { + "type": "monomer", + "id": "14412", + "position": { + "x": 28.60092907104316, + "y": 26.08103549909251 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14609": { + "type": "monomer", + "id": "14609", + "position": { + "x": 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"monomer", + "id": "14614", + "position": { + "x": 30.10092907104316, + "y": 26.08103549909251 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14615": { + "type": "monomer", + "id": "14615", + "position": { + "x": -22.52235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14616": { + "type": "monomer", + "id": "14616", + "position": { + "x": -24.02235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14617": { + "type": "monomer", + "id": "14617", + "position": { + "x": -21.02235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14618": { + "type": "monomer", + "id": "14618", + "position": { + "x": -25.52235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14619": { + "type": "monomer", + "id": "14619", + "position": { + "x": -27.02235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14620": { + "type": "monomer", + "id": "14620", + "position": { + "x": -28.522353835539427, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14621": { + "type": "monomer", + "id": "14621", + "position": { + "x": -13.522353835539414, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14622": { + "type": "monomer", + "id": "14622", + "position": { + "x": -15.022353835539416, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14623": { + "type": "monomer", + "id": "14623", + "position": { + "x": -11.702055080071514, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14624": { + "type": "monomer", + "id": "14624", + "position": { + "x": -16.522353835539413, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14625": { + "type": "monomer", + "id": "14625", + "position": { + "x": -18.022353835539413, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14626": { + "type": "monomer", + "id": "14626", + "position": { + "x": -19.52235383553942, + "y": 24.13646926527644 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14627": { + "type": "monomer", + "id": "14627", + "position": { + "x": -4.202055080071525, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14628": { + "type": "monomer", + "id": "14628", + "position": { + "x": -5.702055080071525, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14629": { + "type": "monomer", + "id": "14629", + "position": { + "x": -2.702055080071527, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14630": { + "type": "monomer", + "id": "14630", + "position": { + "x": -7.202055080071518, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14631": { + "type": "monomer", + "id": "14631", + "position": { + "x": -8.70205508007151, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14632": { + "type": "monomer", + "id": "14632", + "position": { + "x": -10.202055080071508, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14633": { + "type": "monomer", + "id": "14633", + "position": { + "x": 4.797944919928475, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14634": { + "type": "monomer", + "id": "14634", + "position": { + "x": 3.2979449199284696, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14635": { + "type": "monomer", + "id": "14635", + "position": { + "x": 6.2979449199284785, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14636": { + "type": "monomer", + "id": "14636", + "position": { + "x": 1.7979449199284678, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14637": { + "type": "monomer", + "id": "14637", + "position": { + "x": 0.29794491992846706, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14638": { + "type": "monomer", + "id": "14638", + "position": { + "x": -1.202055080071526, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14639": { + "type": "monomer", + "id": "14639", + "position": { + "x": 13.79794491992848, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14640": { + "type": "monomer", + "id": "14640", + "position": { + "x": 12.297944919928481, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14641": { + "type": "monomer", + "id": "14641", + "position": { + "x": 15.297944919928476, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14642": { + "type": "monomer", + "id": "14642", + "position": { + "x": 10.797944919928481, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14643": { + "type": "monomer", + "id": "14643", + "position": { + "x": 9.297944919928478, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14644": { + "type": "monomer", + "id": "14644", + "position": { + "x": 7.797944919928478, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14645": { + "type": "monomer", + "id": "14645", + "position": { + "x": 21.29794491992846, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14646": { + "type": "monomer", + "id": "14646", + "position": { + "x": 24.29794491992846, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14647": { + "type": "monomer", + "id": "14647", + "position": { + "x": 19.797944919928465, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14648": { + "type": "monomer", + "id": "14648", + "position": { + "x": 18.29794491992847, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14649": { + "type": "monomer", + "id": "14649", + "position": { + "x": 16.797944919928472, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14650": { + "type": "monomer", + "id": "14650", + "position": { + "x": 31.79794491992847, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + }, + "monomer14651": { + "type": "monomer", + "id": "14651", + "position": { + "x": 30.29794491992847, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "CHEM_R1_R2_R3_R4_R5_" + }, + "monomer14652": { + "type": "monomer", + "id": "14652", + "position": { + "x": 33.49918859985664, + "y": 24.311271279670006 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Nucleotide_R1_R2_R3_R4_R5_" + }, + "monomer14653": { + "type": "monomer", + "id": "14653", + "position": { + "x": 28.797944919928472, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Peptide_R1_R2_R3_R4_R5_" + }, + "monomer14654": { + "type": "monomer", + "id": "14654", + "position": { + "x": 27.297944919928472, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Phosphate_R1_R2_R3_R4_R5_" + }, + "monomer14655": { + "type": "monomer", + "id": "14655", + "position": { + "x": 25.797944919928465, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Sugar_R1_R2_R3_R4_R5_" + }, + "monomer14672": { + "type": "monomer", + "id": "14672", + "position": { + "x": 22.797944919928458, + "y": 24.263555297653134 + }, + "alias": "(R1,R2,R3,R4,R5)", + "templateId": "Base_R1_R2_R3_R4_R5_" + } +} \ No newline at end of file From 4d1e0a53c6c34e6781eea826d18845bddc523044 Mon Sep 17 00:00:00 2001 From: Alexey Girin Date: Tue, 16 Jul 2024 17:41:02 +0300 Subject: [PATCH 3/5] 5041 - Displaying side chain connections in snake mode - screens corrections --- .../Snake-Mode/side-chain-connections.spec.ts | 58 +++++++++--------- ...s-are-in-the-same-row-1-chromium-linux.png | Bin 24510 -> 24425 bytes 2 files changed, 29 insertions(+), 29 deletions(-) diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts index 23adf127a3..915c29afc9 100755 --- a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts +++ b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts @@ -1159,33 +1159,33 @@ test.describe('Side chain connections', () => { await takeEditorScreenshot(page); }); - test('19. Verify saving and opening structure with side-chain connections in KET format', async ({ - page, - }) => { - /* - /* - /* Case 19: Verify saving and opening structure with side-chain connections in KET format - */ - await selectSequenceLayoutModeTool(page); - await openFileAndAddToCanvasMacro( - `KET/Side-Chain-Connections/19.ket`, - page, - ); - await saveToKet(page, '19-expected.ket'); - }); - - test('20. Verify saving and opening structure with side-chain connections in MOL V3000 format', async ({ - page, - }) => { - /* - /* - /* Case 20: Verify saving and opening structure with side-chain connections in MOL V3000 format - */ - await selectSequenceLayoutModeTool(page); - await openFileAndAddToCanvasMacro( - `KET/Side-Chain-Connections/20.ket`, - page, - ); - await saveToMol(page, '20-expected.mol'); - }); + // test('19. Verify saving and opening structure with side-chain connections in KET format', async ({ + // page, + // }) => { + // /* + // /* + // /* Case 19: Verify saving and opening structure with side-chain connections in KET format + // */ + // await selectSequenceLayoutModeTool(page); + // // await openFileAndAddToCanvasMacro( + // // `KET/Side-Chain-Connections/19.ket`, + // // page, + // // ); + // await saveToKet(page, '19-expected.ket'); + // }); + + // test('20. Verify saving and opening structure with side-chain connections in MOL V3000 format', async ({ + // page, + // }) => { + // /* + // /* + // /* Case 20: Verify saving and opening structure with side-chain connections in MOL V3000 format + // */ + // await selectSequenceLayoutModeTool(page); + // await openFileAndAddToCanvasMacro( + // `KET/Side-Chain-Connections/20.ket`, + // page, + // ); + // await saveToMol(page, '20-expected.mol'); + // }); }); diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-1-Verify-correct-disp-45eca-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts-snapshots/Side-chain-connections-1-1-Verify-correct-disp-45eca-ections-when-two-monomers-are-in-the-same-row-1-chromium-linux.png index cd384db41aaf9d4d13af884ade90dea1f31d0f79..0c83842bced45ed153ecc8e300dc23d462f52dc1 100644 GIT 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z2GQ84MC3biv!Ky7xI}7|TWp^mVosl};9XL(1rlW8yx;PmgjO;*53*_nPaKBFR6`-v zkT9kYWf@ELGG+2e&1{=v@)%z@gjDn({S35=f&P29fml{}sasdn4&l34n#yaf1@3clNIh%A0=nPLM+M_YZ?t-`*8e zHGTivmVid;jt>h10;zxd!w=7X9h64h{Ko2otHxQgX4P|6qa(1VwhA4q@EF*}UCkY< n`7uz7x4L-vKUpBn``0`?XOh0TR#*|h>0O_veI`%Y_tk#^hNEHp From 0333dec269039f816a780aa8871ac9f7a68190e9 Mon Sep 17 00:00:00 2001 From: Alexey Girin Date: Tue, 16 Jul 2024 17:50:42 +0300 Subject: [PATCH 4/5] 5041 - displaying side chains - another correction --- .../Snake-Mode/side-chain-connections.spec.ts | 64 +++++++++---------- 1 file changed, 32 insertions(+), 32 deletions(-) diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts index 915c29afc9..211e34c2cc 100755 --- a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts +++ b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts @@ -13,10 +13,10 @@ import { waitForRender, selectTopPanelButton, TopPanelButton, - getKet, - saveToFile, - receiveFileComparisonData, - getMolfile, + // getKet, + // saveToFile, + // receiveFileComparisonData, + // getMolfile, } from '@utils'; import { turnOnMacromoleculesEditor, @@ -46,34 +46,34 @@ async function saveFileAsPngOrSvgFormat(page: Page, FileFormat: string) { await page.getByRole('option', { name: FileFormat }).click(); } -async function saveToKet(page: Page, fileName: string) { - const expectedKetFile = await getKet(page); - await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedKetFile); - - const { fileExpected: ketFileExpected, file: ketFile } = - await receiveFileComparisonData({ - page, - expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, - }); - - expect(ketFile).toEqual(ketFileExpected); -} - -async function saveToMol(page: Page, fileName: string) { - const ignoredLineIndigo = 1; - const expectedMolFile = await getMolfile(page, 'v3000'); - await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedMolFile); - - const { fileExpected: molFileExpected, file: molFile } = - await receiveFileComparisonData({ - page, - expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, - metaDataIndexes: [ignoredLineIndigo], - fileFormat: 'v3000', - }); - - expect(molFile).toEqual(molFileExpected); -} +// async function saveToKet(page: Page, fileName: string) { +// const expectedKetFile = await getKet(page); +// await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedKetFile); + +// const { fileExpected: ketFileExpected, file: ketFile } = +// await receiveFileComparisonData({ +// page, +// expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, +// }); + +// expect(ketFile).toEqual(ketFileExpected); +// } + +// async function saveToMol(page: Page, fileName: string) { +// const ignoredLineIndigo = 1; +// const expectedMolFile = await getMolfile(page, 'v3000'); +// await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedMolFile); + +// const { fileExpected: molFileExpected, file: molFile } = +// await receiveFileComparisonData({ +// page, +// expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, +// metaDataIndexes: [ignoredLineIndigo], +// fileFormat: 'v3000', +// }); + +// expect(molFile).toEqual(molFileExpected); +// } test.describe('Side chain connections', () => { test.beforeEach(async ({ page }) => { From 388976d3c20de9693b4e4497cc9765b970f98397 Mon Sep 17 00:00:00 2001 From: Alexey Girin Date: Tue, 16 Jul 2024 18:28:10 +0300 Subject: [PATCH 5/5] 5041 - displaying side chains - another correction 2 --- .../Snake-Mode/side-chain-connections.spec.ts | 114 +++++++++--------- 1 file changed, 57 insertions(+), 57 deletions(-) diff --git a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts index 211e34c2cc..919cf98bc7 100755 --- a/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts +++ b/ketcher-autotests/tests/Macromolecule-editor/Snake-Mode/side-chain-connections.spec.ts @@ -1,4 +1,4 @@ -import { Page, test } from '@playwright/test'; +import { Page, test, expect } from '@playwright/test'; import { selectSnakeLayoutModeTool, takeEditorScreenshot, @@ -13,10 +13,10 @@ import { waitForRender, selectTopPanelButton, TopPanelButton, - // getKet, - // saveToFile, - // receiveFileComparisonData, - // getMolfile, + getKet, + saveToFile, + receiveFileComparisonData, + getMolfile, } from '@utils'; import { turnOnMacromoleculesEditor, @@ -46,34 +46,34 @@ async function saveFileAsPngOrSvgFormat(page: Page, FileFormat: string) { await page.getByRole('option', { name: FileFormat }).click(); } -// async function saveToKet(page: Page, fileName: string) { -// const expectedKetFile = await getKet(page); -// await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedKetFile); +async function saveToKet(page: Page, fileName: string) { + const expectedKetFile = await getKet(page); + await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedKetFile); -// const { fileExpected: ketFileExpected, file: ketFile } = -// await receiveFileComparisonData({ -// page, -// expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, -// }); + const { fileExpected: ketFileExpected, file: ketFile } = + await receiveFileComparisonData({ + page, + expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, + }); -// expect(ketFile).toEqual(ketFileExpected); -// } + expect(ketFile).toEqual(ketFileExpected); +} -// async function saveToMol(page: Page, fileName: string) { -// const ignoredLineIndigo = 1; -// const expectedMolFile = await getMolfile(page, 'v3000'); -// await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedMolFile); +async function saveToMol(page: Page, fileName: string) { + const ignoredLineIndigo = 1; + const expectedMolFile = await getMolfile(page, 'v3000'); + await saveToFile(`KET/Side-Chain-Connections/${fileName}`, expectedMolFile); -// const { fileExpected: molFileExpected, file: molFile } = -// await receiveFileComparisonData({ -// page, -// expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, -// metaDataIndexes: [ignoredLineIndigo], -// fileFormat: 'v3000', -// }); + const { fileExpected: molFileExpected, file: molFile } = + await receiveFileComparisonData({ + page, + expectedFileName: `tests/test-data/KET/Side-Chain-Connections/${fileName}`, + metaDataIndexes: [ignoredLineIndigo], + fileFormat: 'v3000', + }); -// expect(molFile).toEqual(molFileExpected); -// } + expect(molFile).toEqual(molFileExpected); +} test.describe('Side chain connections', () => { test.beforeEach(async ({ page }) => { @@ -1159,33 +1159,33 @@ test.describe('Side chain connections', () => { await takeEditorScreenshot(page); }); - // test('19. Verify saving and opening structure with side-chain connections in KET format', async ({ - // page, - // }) => { - // /* - // /* - // /* Case 19: Verify saving and opening structure with side-chain connections in KET format - // */ - // await selectSequenceLayoutModeTool(page); - // // await openFileAndAddToCanvasMacro( - // // `KET/Side-Chain-Connections/19.ket`, - // // page, - // // ); - // await saveToKet(page, '19-expected.ket'); - // }); - - // test('20. Verify saving and opening structure with side-chain connections in MOL V3000 format', async ({ - // page, - // }) => { - // /* - // /* - // /* Case 20: Verify saving and opening structure with side-chain connections in MOL V3000 format - // */ - // await selectSequenceLayoutModeTool(page); - // await openFileAndAddToCanvasMacro( - // `KET/Side-Chain-Connections/20.ket`, - // page, - // ); - // await saveToMol(page, '20-expected.mol'); - // }); + test('19. Verify saving and opening structure with side-chain connections in KET format', async ({ + page, + }) => { + /* + /* + /* Case 19: Verify saving and opening structure with side-chain connections in KET format + */ + await selectSequenceLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/19.ket`, + page, + ); + await saveToKet(page, '19-expected.ket'); + }); + + test('20. Verify saving and opening structure with side-chain connections in MOL V3000 format', async ({ + page, + }) => { + /* + /* + /* Case 20: Verify saving and opening structure with side-chain connections in MOL V3000 format + */ + await selectSequenceLayoutModeTool(page); + await openFileAndAddToCanvasMacro( + `KET/Side-Chain-Connections/20.ket`, + page, + ); + await saveToMol(page, '20-expected.mol'); + }); });

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