Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

New page - XNAT-PIC: XNAT for Preclinical Imaging Centers #633

Closed
szullino opened this issue Jun 30, 2021 · 2 comments · Fixed by #651
Closed

New page - XNAT-PIC: XNAT for Preclinical Imaging Centers #633

szullino opened this issue Jun 30, 2021 · 2 comments · Fixed by #651
Assignees

Comments

@szullino
Copy link
Contributor

What topic do you wish to add?
XNAT for Preclinical Imaging Centers (XNAT-PIC) has been developed to expand XNAT's basic functionalities to preclinical imaging and consists of:

  • MRI2DICOM, a Magnetic Resonance Imaging (MRI) converter from ParaVision® (Bruker, Inc. Billerica, MA) file format to DICOM standard

  • XNAT-PIC Uploader to import multimodal DICOM image datasets to XNAT

  • XNAT-PIC Pipelines for analysing single or multiple subjects within the same project in XNAT.

Are there existing pages in the RDMkit website related to the requested page?
No.

Resources
If there are there resources that could be utilised for writing the new page, please list them below:

Context
If this request is coming from a particular project, domain, or use-case please list them below:

Invited to contribute to the RDMkit.

@korbinib korbinib self-assigned this Jun 30, 2021
@korbinib
Copy link
Collaborator

korbinib commented Jun 30, 2021

Hi @szullino, this looks like a great idea. If you would like to contribute through git, please fork the repo and add your own page based on this template and do a pull request.

I would like to suggest the following sections:

  1. What is XNAT-PIC?
  2. Who is XNAT-PIC intended for?
  3. Which task can be solved with XNAT-PIC?
  4. optional: Training resources (like e.g. webinar recordings, slides, ...)
  5. tools

Please add your tools to the csv through git or in this google sheet

You can also add yourself to the list of contributors.

We are currently revising the tag/page referencing system (#631) so it might be best to leave this until the end.

@korbinib
Copy link
Collaborator

In addition to a tool assembly page it might be also interesting to have the consideration on DICOM and metadata for preclinical imaging described in a domain page

@bedroesb bedroesb pinned this issue Jul 13, 2021
@bedroesb bedroesb unpinned this issue Jul 13, 2021
@bedroesb bedroesb linked a pull request Jul 13, 2021 that will close this issue
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging a pull request may close this issue.

2 participants