README.Rmd

---
output: github_document
---

<!-- README.md is generated from README.Rmd. Please edit that file -->

```{r, include = FALSE}
knitr::opts_chunk$set(
    collapse = TRUE,
    comment = "#>",
    out.width = "100%"
)
```

The REPAC R package implements the method described in [Imada](https://www.biorxiv.org/content/10.1101/2022.03.14.484280v1) et al. to test for differential Polyadenylation Usage (DPU).

## Instalation instructions

Get the latest stable `R` release from [CRAN](http://cran.r-project.org/). Then run the following code:

```{r 'install', eval = FALSE}
if (!requireNamespace("devtools", quietly = TRUE)) {
    install.packages("devtools")
}

devtools::install_github('eddieimada/REPAC')
```

## Citation

Below is the citation output from using `citation('REPAC')` in R. Please
run this yourself to check for any updates on how to cite __REPAC__.

```{r 'citation', eval = requireNamespace('REPAC')}
print(citation('REPAC'), bibtex = TRUE)
```