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snapshot.go
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package iavl
import (
"bytes"
"context"
"errors"
"fmt"
"os"
"path/filepath"
"strconv"
"time"
"github.com/bvinc/go-sqlite-lite/sqlite3"
"github.com/dustin/go-humanize"
api "github.com/kocubinski/costor-api"
"github.com/kocubinski/costor-api/logz"
"github.com/rs/zerolog"
)
type sqliteSnapshot struct {
ctx context.Context
conn *sqlite3.Conn
snapshotInsert *sqlite3.Stmt
sql *SqliteDb
leafInsert *sqlite3.Stmt
treeInsert *sqlite3.Stmt
// if set will flush nodes to a tree & leaf tables as well as a snapshot table during import
writeTree bool
lastWrite time.Time
ordinal int
batchSize int
version int64
getLeft func(*Node) *Node
getRight func(*Node) *Node
log zerolog.Logger
}
func (sql *SqliteDb) Snapshot(ctx context.Context, tree *Tree) error {
version := tree.version
err := sql.leafWrite.Exec(
fmt.Sprintf("CREATE TABLE snapshot_%d (ordinal int, version int, sequence int, bytes blob);", version))
if err != nil {
return err
}
snapshot := &sqliteSnapshot{
ctx: ctx,
sql: sql,
batchSize: 200_000,
version: version,
log: log.With().Str("path", filepath.Base(sql.opts.Path)).Logger(),
getLeft: func(node *Node) *Node {
return node.left(tree)
},
getRight: func(node *Node) *Node {
return node.right(tree)
},
}
if err = snapshot.prepareWrite(); err != nil {
return err
}
if err = snapshot.writeStep(tree.root); err != nil {
return err
}
if err = snapshot.flush(); err != nil {
return err
}
log.Info().Str("path", sql.opts.Path).Msgf("creating index on snapshot_%d", version)
err = sql.leafWrite.Exec(fmt.Sprintf("CREATE INDEX snapshot_%d_idx ON snapshot_%d (ordinal);", version, version))
return err
}
type SnapshotOptions struct {
StoreLeafValues bool
SaveTree bool
}
func NewIngestSnapshotConnection(snapshotDbPath string) (*sqlite3.Conn, error) {
newDb := !api.IsFileExistent(snapshotDbPath)
conn, err := sqlite3.Open(fmt.Sprintf("file:%s", snapshotDbPath))
if err != nil {
return nil, err
}
pageSize := os.Getpagesize()
if newDb {
log.Info().Msgf("setting page size to %s", humanize.Bytes(uint64(pageSize)))
err = conn.Exec(fmt.Sprintf("PRAGMA page_size=%d; VACUUM;", pageSize))
if err != nil {
return nil, err
}
err = conn.Exec("PRAGMA journal_mode=WAL;")
if err != nil {
return nil, err
}
}
err = conn.Exec("PRAGMA synchronous=OFF;")
if err != nil {
return nil, err
}
walSize := 1024 * 1024 * 1024
if err = conn.Exec(fmt.Sprintf("PRAGMA wal_autocheckpoint=%d", walSize/pageSize)); err != nil {
return nil, err
}
return conn, err
}
func IngestSnapshot(conn *sqlite3.Conn, prefix string, version int64, nextFn func() (*SnapshotNode, error)) (*Node, error) {
var (
insert *sqlite3.Stmt
tableName = fmt.Sprintf("snapshot_%s_%d", prefix, version)
ordinal int
batchSize = 200_000
log = logz.Logger.With().Str("prefix", prefix).Logger()
step func() (*Node, error)
lastWrite = time.Now()
)
err := conn.Exec(fmt.Sprintf("CREATE TABLE %s (ordinal int, version int, sequence int, bytes blob);", tableName))
if err != nil {
return nil, err
}
prepare := func() error {
if err = conn.Begin(); err != nil {
return err
}
insert, err = conn.Prepare(
fmt.Sprintf("INSERT INTO %s (ordinal, version, sequence, bytes) VALUES (?, ?, ?, ?);", tableName))
if err != nil {
return err
}
return nil
}
flush := func() error {
log.Info().Msgf("flush total=%s size=%s dur=%s wr/s=%s",
humanize.Comma(int64(ordinal)),
humanize.Comma(int64(batchSize)),
time.Since(lastWrite).Round(time.Millisecond),
humanize.Comma(int64(float64(batchSize)/time.Since(lastWrite).Seconds())),
)
err = errors.Join(conn.Commit(), insert.Close())
lastWrite = time.Now()
return err
}
maybeFlush := func() error {
if ordinal%batchSize == 0 {
if err = flush(); err != nil {
return err
}
if err = prepare(); err != nil {
return err
}
}
return nil
}
if err = prepare(); err != nil {
return nil, err
}
step = func() (*Node, error) {
snapshotNode, err := nextFn()
if err != nil {
return nil, err
}
ordinal++
node := &Node{
key: snapshotNode.Key,
subtreeHeight: snapshotNode.Height,
nodeKey: NewNodeKey(snapshotNode.Version, uint32(ordinal)),
}
if node.subtreeHeight == 0 {
node.value = snapshotNode.Value
node.size = 1
node._hash(snapshotNode.Version)
nodeBz, err := node.Bytes()
if err != nil {
return nil, err
}
if err = insert.Exec(ordinal, snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
if err = maybeFlush(); err != nil {
return nil, err
}
return node, nil
}
node.leftNode, err = step()
if err != nil {
return nil, err
}
node.leftNodeKey = node.leftNode.nodeKey
node.rightNode, err = step()
if err != nil {
return nil, err
}
node.rightNodeKey = node.rightNode.nodeKey
node.size = node.leftNode.size + node.rightNode.size
node._hash(snapshotNode.Version)
node.leftNode = nil
node.rightNode = nil
nodeBz, err := node.Bytes()
if err != nil {
return nil, err
}
if err = insert.Exec(ordinal, snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
if err = maybeFlush(); err != nil {
return nil, err
}
return node, nil
}
root, err := step()
if err != nil {
return nil, err
}
if err = flush(); err != nil {
return nil, err
}
if err = conn.Exec(fmt.Sprintf("CREATE INDEX %s_idx ON %s (ordinal);", tableName, tableName)); err != nil {
return nil, err
}
if err = conn.Close(); err != nil {
return nil, err
}
return root, nil
}
func (sql *SqliteDb) WriteSnapshot(
ctx context.Context, version int64, nextFn func() (*SnapshotNode, error), opts SnapshotOptions,
) (*Node, error) {
snap := &sqliteSnapshot{
ctx: ctx,
sql: sql,
batchSize: 400_000,
version: version,
lastWrite: time.Now(),
log: log.With().Str("path", filepath.Base(sql.opts.Path)).Logger(),
writeTree: true,
}
if opts.SaveTree {
if err := sql.NextShard(); err != nil {
return nil, err
}
}
err := snap.sql.leafWrite.Exec(
fmt.Sprintf("CREATE TABLE snapshot_%d (ordinal int, version int, sequence int, bytes blob);", version))
if err != nil {
return nil, err
}
if err = snap.prepareWrite(); err != nil {
return nil, err
}
var (
step func() (*Node, error)
maybeFlush func() error
count int
uniqueVersions = make(map[int64]struct{})
)
maybeFlush = func() error {
count++
if count%snap.batchSize == 0 {
if err = snap.flush(); err != nil {
return err
}
if err = snap.prepareWrite(); err != nil {
return err
}
}
return nil
}
step = func() (*Node, error) {
snapshotNode, err := nextFn()
if err != nil {
return nil, err
}
ordinal := snap.ordinal
snap.ordinal++
node := &Node{
key: snapshotNode.Key,
subtreeHeight: snapshotNode.Height,
nodeKey: NewNodeKey(snapshotNode.Version, uint32(ordinal)),
}
if node.subtreeHeight == 0 {
node.value = snapshotNode.Value
node.size = 1
node._hash(snapshotNode.Version)
if !opts.StoreLeafValues {
node.value = nil
}
nodeBz, err := node.Bytes()
if err != nil {
return nil, err
}
if err = snap.snapshotInsert.Exec(ordinal, snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
if err = snap.leafInsert.Exec(snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
if err = maybeFlush(); err != nil {
return nil, err
}
return node, nil
}
node.leftNode, err = step()
if err != nil {
return nil, err
}
node.leftNodeKey = node.leftNode.nodeKey
node.rightNode, err = step()
if err != nil {
return nil, err
}
node.rightNodeKey = node.rightNode.nodeKey
node.size = node.leftNode.size + node.rightNode.size
node._hash(snapshotNode.Version)
node.leftNode = nil
node.rightNode = nil
nodeBz, err := node.Bytes()
if err != nil {
return nil, err
}
if err = snap.snapshotInsert.Exec(ordinal, snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
if err = snap.treeInsert.Exec(snapshotNode.Version, ordinal, nodeBz); err != nil {
return nil, err
}
uniqueVersions[snapshotNode.Version] = struct{}{}
if err = maybeFlush(); err != nil {
return nil, err
}
return node, nil
}
root, err := step()
if err != nil {
return nil, err
}
if err = snap.flush(); err != nil {
return nil, err
}
var versions []int64
for v := range uniqueVersions {
versions = append(versions, v)
}
if err = sql.MapVersions(versions, sql.shardId); err != nil {
return nil, err
}
if err = sql.SaveRoot(version, root); err != nil {
return nil, err
}
log.Info().Str("path", sql.opts.Path).Msg("creating table indexes")
err = sql.leafWrite.Exec(fmt.Sprintf("CREATE INDEX snapshot_%d_idx ON snapshot_%d (ordinal);", version, version))
if err != nil {
return nil, err
}
err = snap.sql.treeWrite.Exec(fmt.Sprintf(
"CREATE INDEX IF NOT EXISTS tree_idx_%d ON tree_%d (version, sequence);",
snap.sql.shardId, snap.sql.shardId))
if err != nil {
return nil, err
}
err = snap.sql.leafWrite.Exec("CREATE INDEX IF NOT EXISTS leaf_idx ON leaf (version, sequence)")
if err != nil {
return nil, err
}
return root, nil
}
type SnapshotNode struct {
Key []byte
Value []byte
Version int64
Height int8
}
func (sql *SqliteDb) ImportSnapshotFromTable(version int64, loadLeaves bool) (*Node, error) {
read, err := sql.getReadConn()
if err != nil {
return nil, err
}
q, err := read.Prepare(fmt.Sprintf("SELECT version, sequence, bytes FROM snapshot_%d ORDER BY ordinal", version))
if err != nil {
return nil, err
}
defer func(q *sqlite3.Stmt) {
err = q.Close()
if err != nil {
log.Error().Err(err).Msg("error closing import query")
}
}(q)
imp := &sqliteImport{
query: q,
pool: sql.pool,
loadLeaves: loadLeaves,
since: time.Now(),
log: log.With().Str("path", sql.opts.Path).Logger(),
}
root, err := imp.queryStep()
if err != nil {
return nil, err
}
if !loadLeaves {
return root, nil
}
h := root.hash
rehashTree(root)
if !bytes.Equal(h, root.hash) {
return nil, fmt.Errorf("rehash failed; expected=%x, got=%x", h, root.hash)
}
return root, nil
}
func (sql *SqliteDb) ImportMostRecentSnapshot(targetVersion int64, loadLeaves bool) (*Node, int64, error) {
read, err := sql.getReadConn()
if err != nil {
return nil, 0, err
}
q, err := read.Prepare("SELECT tbl_name FROM changelog.sqlite_master WHERE type='table' AND name LIKE 'snapshot_%' ORDER BY name DESC")
defer func(q *sqlite3.Stmt) {
err = q.Close()
if err != nil {
log.Error().Err(err).Msg("error closing import query")
}
}(q)
if err != nil {
return nil, 0, err
}
var (
name string
version int64
)
for {
ok, err := q.Step()
if err != nil {
return nil, 0, err
}
if !ok {
return nil, 0, fmt.Errorf("no prior snapshot found version=%d path=%s", targetVersion, sql.opts.Path)
}
err = q.Scan(&name)
if err != nil {
return nil, 0, err
}
vs := name[len("snapshot_"):]
if vs == "" {
return nil, 0, fmt.Errorf("unexpected snapshot table name %s", name)
}
version, err = strconv.ParseInt(vs, 10, 64)
if err != nil {
return nil, 0, err
}
if version <= targetVersion {
break
}
}
root, err := sql.ImportSnapshotFromTable(version, loadLeaves)
if err != nil {
return nil, 0, err
}
return root, version, err
}
func FindDbsInPath(path string) ([]string, error) {
var paths []string
err := filepath.Walk(path, func(path string, info os.FileInfo, err error) error {
if err != nil {
return err
}
if filepath.Base(path) == "changelog.sqlite" {
paths = append(paths, filepath.Dir(path))
}
return nil
})
if err != nil {
return nil, err
}
return paths, nil
}
// TODO
// merge these two functions
func (snap *sqliteSnapshot) writeStep(node *Node) error {
snap.ordinal++
// Pre-order, NLR traversal
// Visit this node
nodeBz, err := node.Bytes()
if err != nil {
return err
}
err = snap.snapshotInsert.Exec(snap.ordinal, node.nodeKey.Version(), int(node.nodeKey.Sequence()), nodeBz)
if err != nil {
return err
}
if snap.ordinal%snap.batchSize == 0 {
if err = snap.flush(); err != nil {
return err
}
if err = snap.prepareWrite(); err != nil {
return err
}
}
if node.isLeaf() {
return nil
}
// traverse left
err = snap.writeStep(snap.getLeft(node))
if err != nil {
return err
}
// traverse right
return snap.writeStep(snap.getRight(node))
}
func (snap *sqliteSnapshot) flush() error {
select {
case <-snap.ctx.Done():
snap.log.Info().Msgf("snapshot cancelled at ordinal=%s", humanize.Comma(int64(snap.ordinal)))
errs := errors.Join(
snap.snapshotInsert.Reset(),
snap.snapshotInsert.Close(),
)
if errs != nil {
return errs
}
if snap.writeTree {
errs = errors.Join(
snap.leafInsert.Reset(),
snap.leafInsert.Close(),
snap.treeInsert.Reset(),
snap.treeInsert.Close(),
)
}
errs = errors.Join(
errs,
snap.sql.leafWrite.Rollback(),
snap.sql.leafWrite.Close(),
)
if errs != nil {
return errs
}
if snap.writeTree {
errs = errors.Join(
errs,
snap.sql.treeWrite.Rollback(),
snap.sql.treeWrite.Close(),
)
}
return errs
default:
}
snap.log.Info().Msgf("flush total=%s size=%s dur=%s wr/s=%s",
humanize.Comma(int64(snap.ordinal)),
humanize.Comma(int64(snap.batchSize)),
time.Since(snap.lastWrite).Round(time.Millisecond),
humanize.Comma(int64(float64(snap.batchSize)/time.Since(snap.lastWrite).Seconds())),
)
err := errors.Join(
snap.sql.leafWrite.Commit(),
snap.snapshotInsert.Close(),
)
if err != nil {
return err
}
if snap.writeTree {
err = errors.Join(
snap.leafInsert.Close(),
snap.sql.treeWrite.Commit(),
snap.treeInsert.Close(),
)
}
snap.lastWrite = time.Now()
return err
}
func (snap *sqliteSnapshot) prepareWrite() error {
err := snap.sql.leafWrite.Begin()
if err != nil {
return err
}
snap.snapshotInsert, err = snap.sql.leafWrite.Prepare(
fmt.Sprintf("INSERT INTO snapshot_%d (ordinal, version, sequence, bytes) VALUES (?, ?, ?, ?);",
snap.version))
if snap.writeTree {
err = snap.sql.treeWrite.Begin()
if err != nil {
return err
}
snap.leafInsert, err = snap.sql.leafWrite.Prepare("INSERT INTO leaf (version, sequence, bytes) VALUES (?, ?, ?)")
if err != nil {
return err
}
snap.treeInsert, err = snap.sql.treeWrite.Prepare(
fmt.Sprintf("INSERT INTO tree_%d (version, sequence, bytes) VALUES (?, ?, ?)", snap.sql.shardId))
}
return err
}
func rehashTree(node *Node) {
if node.isLeaf() {
return
}
node.hash = nil
rehashTree(node.leftNode)
rehashTree(node.rightNode)
node._hash(node.nodeKey.Version())
}
type sqliteImport struct {
query *sqlite3.Stmt
pool *NodePool
loadLeaves bool
i int64
since time.Time
log zerolog.Logger
}
func (sqlImport *sqliteImport) queryStep() (node *Node, err error) {
sqlImport.i++
if sqlImport.i%1_000_000 == 0 {
sqlImport.log.Debug().Msgf("import: nodes=%s, node/s=%s",
humanize.Comma(sqlImport.i),
humanize.Comma(int64(float64(1_000_000)/time.Since(sqlImport.since).Seconds())),
)
sqlImport.since = time.Now()
}
hasRow, err := sqlImport.query.Step()
if !hasRow {
return nil, nil
}
if err != nil {
return nil, err
}
var bz sqlite3.RawBytes
var version, seq int
err = sqlImport.query.Scan(&version, &seq, &bz)
if err != nil {
return nil, err
}
nodeKey := NewNodeKey(int64(version), uint32(seq))
node, err = MakeNode(sqlImport.pool, nodeKey, bz)
if err != nil {
return nil, err
}
if node.isLeaf() && sqlImport.i > 1 {
if sqlImport.loadLeaves {
return node, nil
}
sqlImport.pool.Put(node)
return nil, nil
}
node.leftNode, err = sqlImport.queryStep()
if err != nil {
return nil, err
}
node.rightNode, err = sqlImport.queryStep()
if err != nil {
return nil, err
}
return node, nil
}