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I think this data should be in the anndata and it would be great if this could be exported. In some Seurat analysis like multi-modal integration, it uses this information in ways like rownames(seuratObj@[email protected]). Not having this from anndata means that pca pre-calculated by scanpy cannot be used.
Thanks!
The text was updated successfully, but these errors were encountered:
Hello,
It seems that currently
anndata2seurat
does not export feature loadings from PCA.sceasy/R/functions.R
Line 461 in 0cfc0e3
I think this data should be in the anndata and it would be great if this could be exported. In some Seurat analysis like multi-modal integration, it uses this information in ways like
rownames(seuratObj@[email protected])
. Not having this from anndata means that pca pre-calculated by scanpy cannot be used.Thanks!
The text was updated successfully, but these errors were encountered: