tickTack is a package to infer kinetic parameters of an evolving population whose size is observed at discrete intervals of time. The tool is able to
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time simple CNAs for each segment affected by them
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time CNAs in a hierarchical fashion, grouping together segments that most likely underwent a CNA concurrently
You can install the released version of tickTack from
GitHub with:
# install.packages("devtools")
devtools::install_github("caravagnalab/tickTack")Sara Cocomello, Giovanni Santacatterina, Giulio Caravagna. Cancer Data Science (CDS) Laboratory, University of Trieste, Italy.
