NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(print,evopipe_deconv)
S3method(print,mbst_data)
S3method(summary,mbst_data)
export(Annotations)
export(Clusters)
export(DP)
export(DP_table)
export(Data_table)
export(N)
export(NV)
export(NV_table)
export(S)
export(VAF)
export(VAF_table)
export(analyze_VIBER)
export(analyze_mobster)
export(dataset)
export(evoparse_Sequenza_CNAs)
export(evoparse_mutect_mutations)
export(evoparse_platypus_mutations)
export(filter_downsample)
export(filter_dp_range)
export(filter_nv_range)
export(filter_tails)
export(filter_vaf_nv_min)
export(filter_vaf_range)
export(keys)
export(pipeline_chromosome_timing)
export(pipeline_clonal_mutations_purity)
export(pipeline_qc_copynumbercalls)
export(pipeline_subclonal_deconvolution_CCF)
export(pipeline_subclonal_deconvolution_VAF)
export(plot.evopipe_deconv)
export(plot.mbst_data)
export(plot_1D_VAF)
export(plot_2D_VAF)
export(plot_2D_VAF_MOBSTER)
export(plot_sample)
import(CNAqc)
import(VIBER)
import(cowplot)
import(ggpubr)
import(mobster)
import(pio)