Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

get_dicom_files.pl cannot find DICOM files with no echo time #1054

Closed
nicolasbrossard opened this issue Mar 19, 2024 · 0 comments · Fixed by #1055
Closed

get_dicom_files.pl cannot find DICOM files with no echo time #1054

nicolasbrossard opened this issue Mar 19, 2024 · 0 comments · Fixed by #1055

Comments

@nicolasbrossard
Copy link
Collaborator

In IBIS, we have MRI acquisitions that do not have the EchoNumber DICOM tag. They are identified solely using an regex for the series description. However, when the MRI pipeline populates the tarchive_files table, it cannot set the TarchiveSeriesID column, as it needs the echo time to find the corresponding entry in table tarchive_series. As a result, the column is set to NULL and this makes script get_dicom_files.pl unable to extract the DICOM files for these acquisitions.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
1 participant