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Copy pathLogPotGUI_LoV1_1.java
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LogPotGUI_LoV1_1.java
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import processing.core.*;
import processing.data.*;
import processing.event.*;
import processing.opengl.*;
import org.gicentre.utils.gui.TextPopup;
import org.gicentre.utils.stat.*;
import org.gicentre.utils.multisketch.*;
import controlP5.*;
import processing.serial.*;
import java.io.*;
import java.util.HashMap;
import java.util.ArrayList;
import java.io.File;
import java.io.BufferedReader;
import java.io.PrintWriter;
import java.io.InputStream;
import java.io.OutputStream;
import java.io.IOException;
public class LogPotGUI_LoV1_1 extends PApplet {
///////////////////////////////////////// Imports/////////////////////////////////
// for warning window
// For chart classes.
// for intergration window
// this is needed for BufferedWriter
///////////////////////////////////////////////////////////////Classes///////////////
XYChart win1Chart;
XYChart intergChart;
XYChart lineChart;
XYChart lineChartIf;
XYChart lineChartIb;
ControlP5 cp5,cp5b,cp5c;
Serial serial;
Textarea myTextarea; // com port and status window
Textarea myTextarea2; // save file path window
Textarea warningtxt; // text for warning window
Textfield Starting_Voltage, End_Voltage, Scan_Rate, Delay_Time, InitialV_Time, FinalV_Time, Number_of_Runs, Run_Intervale;
DropdownList ports, mode; //Define the variable ports and mode as a Dropdownlist.
PopupWindow win = new PopupWindow(this,new AnotherSketch());
PopupWindow warning = new PopupWindow(this,new WarningSketch());
//////////////////////////////////variables//////////////////////
int ldo = 2500;
int numrun = 0;
String Nor; // # of runs variable
int iNor; // # of runs int varialbe
String Rint; // run interval
int iRint; // int run interval
String sData3 ="";
char[] strtochar;
int updatechart;
String InitVT;
int iInitVT;
String FnlVT;
int iFnlVT;
boolean gotparams = false;
float wdth;
float higt;
boolean mousest = false;
boolean nxtpt = false;
int Ss; //The dropdown list will return a float value, which we will connvert into an int. we will use this int for that).
String[] comList ; //A string to hold the ports in.
String[] comList2; // string to compare comlist to and update
boolean serialSet; //A value to test if we have setup the Serial port.
boolean Comselected = false; //A value to test if you have chosen a port in the list.
int Modi;
boolean Modesel = false;
String Modetorun;
int xacu;
int yacu;
float xspace;
float yspace;
ArrayList qdat;
boolean bool = false;
float p1;
float p2;
String StartV;
int iStartV;
String EndV;
int iEndV;
String ScanR;
int iScanR;
String DelayT;
int iDelayT;
int xPos = 150;
String ComP;
int serialPortNumber;
String file1 = "logdata.txt";//"C:/Users/Ben/Documents/Voltammetry Stuff/log/data.txt"; //"C:/Users/Public/Documents/Electrochem/logfiletest/TestLog.txt"
String file2;
String file;
String[] sData = new String[3]; //String sData;
String sData2 = " ";
char cData;
int logDelay = 1000;
String Go = "1";
String ASVmod = "1";
String CVmod = "2";
String TIMEDmod = "3";
String LOG_ASVmod = "4";
String star = "*";
int i =0;
float[] V = {0};
float[] I1 = {0};
float[] I2 = {0};
float[] Idif = {0};
float[] newV = {0};
float[] newI1 = {0};
float[] newI2 = {0};
float[] newIdif = {0};
///integration variables///////////////////////
ArrayList pvector_dat = new ArrayList();
float bx1;
float by1;
float bbtm;
float bwdth; //
PVector XY1; // baseline point 1
PVector XY2; // baseline point 2
float area; // peak area
float areabase; // baseline area (subtracted from peak area)
float peaktest; // variable for peak height
float peakheight; // variable for peak height
//////////////font varialbes///////////////////////////////
PFont font = createFont("arial", 20);
PFont font2 = createFont("arial", 16);
PFont font3 = createFont("arial",12);
PFont font4 = createFont("andalus",16);
///////////////////////////////Setup////////////////////////////////////////////////////
public void setup() {
frameRate(2000);
size(800, 675); // (800, 700)
textFont(font2);
frame.setResizable(true);
charts_gic_setup();
cp5_controllers_setup();
}////////////////////End Setup/////////////////////////////
/////////////////////////////////////////////////Draw//////////////////////////////////////////////
public void draw() {
background(58, 2, 67);
fill(58, 2, 67);
noStroke();
rect(0, 80, 780, 580);
fill(0xffEADFC9);//#FFFEFC);
noStroke();
rect(200, 80, 580, 580);
textFont(font4,18);
pushMatrix();
fill(0xffDEC507);
text("Smoky Mountain",30,height-67);
text("Scientific",36,height-53);
popMatrix();
pushMatrix();
textFont(font2,12);
fill(0xffDEC507);
// fill(#080606);
text("LogPotGUI_LoV1_1",20,height-30);
popMatrix();
textFont(font2);
//if (bool == false){
comList2 = Serial.list();
if (comList.length != comList2.length) { //if(comList.equals(comList2)==false){ // if (comList.length != comList2.length) {
ports.clear();
comList = comList2;
for (int i=0; i< comList.length; i++)
{
ports.addItem(comList2[i], i); // add available serial ports
}
}
if(comList.length == 0){
myTextarea2.setText("NOT CONN.");
ports.clear(); // clear ports dropdown list
ports.captionLabel().set("Select COM port");
try{
serial.stop(); // stop the serial port so a new connection can be established
}
catch(Exception e){}
Comselected = false;
}
if (Modetorun=="ASV" || Modetorun=="LOG-ASV") {
try{
lineChart.setXAxisLabel("Potential (V)");
lineChart.setYAxisLabel("Current");
lineChart.draw(280, 320, 350, 300);
lineChartIf.draw(220, 80, 250, 200);
lineChartIb.draw(490, 80, 250, 200);
}
catch(Exception e){
if(V.length >2){
V = subset(V,1);
I1= subset(I1,1);
I2= subset(I2,1);
Idif = subset(Idif,1);
println("exception");
}
}
fill(120);
textSize(16);
text("Forward Current", 280, 100);
text("Back Current", 550, 100);
text("Forward-Back Current", 340, 340);
}
if (Modetorun=="CV") {
fill(120);
textSize(16);
text("CV Data", 450, 100);
try{
lineChart.setXAxisLabel("Potential (V)");
lineChart.setYAxisLabel("Current");
lineChart.draw(230, 120, 450, 450);
}
catch(Exception e){
if(V.length >2){
V = subset(V,1);
I1= subset(I1,1);
I2= subset(I2,1);
Idif = subset(Idif,1);
println("exception");
}
}
}
if (Modetorun=="TIMED") {
fill(120);
textSize(16);
text("Timed Data", 450, 100);
try{
lineChart.setXAxisLabel("Time (msec)");
lineChart.setYAxisLabel("Current");
lineChart.draw(230, 120, 450, 450);
}
catch(Exception e){
if(V.length >2){
V = subset(V,1);
I1= subset(I1,1);
I2= subset(I2,1);
Idif = subset(Idif,1);
println("exception");
}
}
}
//if (bool == false){
if (Modesel==false) {
Starting_Voltage.hide();
End_Voltage.hide();
Delay_Time.hide();
Scan_Rate.hide();
FinalV_Time.hide();
InitialV_Time.hide();
Number_of_Runs.hide();
Run_Intervale.hide();
cp5.controller("Start_Run").hide();
cp5.controller("Intergrate_Data").hide();
}
if (Modesel==true) {
Starting_Voltage.show();
End_Voltage.show();
if (Modetorun=="CV") {
Delay_Time.hide();
Scan_Rate.show();
InitialV_Time.hide();
FinalV_Time.hide();
Number_of_Runs.hide();
Run_Intervale.hide();
}
if (Modetorun=="ASV") {
Delay_Time.show();
Scan_Rate.show();
InitialV_Time.hide();
FinalV_Time.hide();
Number_of_Runs.hide();
Run_Intervale.hide();
}
if(Modetorun=="TIMED"){
Delay_Time.hide();
Scan_Rate.hide();
Number_of_Runs.hide();
Run_Intervale.hide();
InitialV_Time.show();
FinalV_Time.show();
}
if (Modetorun=="LOG-ASV") {
Delay_Time.show();
Scan_Rate.show();
Number_of_Runs.show();
Run_Intervale.show();
InitialV_Time.hide();
FinalV_Time.hide();
}
cp5.controller("Start_Run").show();
cp5.controller("Intergrate_Data").show();
}
// } // end if bool == false
if (bool == true && Comselected == true) {
if (gotparams == false) {
V = newV; //float[]
I1 = newI1;
I2 = newI2;
Idif = newIdif;
println("com "+Comselected);
if (Modetorun.equals("ASV")) {
Starting_Voltage();
End_Voltage();
Scan_Rate();
Delay_Time();
serial.write(ASVmod); // prg 1 for ASV
delay(100);
serial.write(StartV);
delay(100);
serial.write(EndV);
delay(100);
serial.write(ScanR);
delay(100);
serial.write(DelayT);
delay(100);
serial.write(Go);
println(StartV);
println(EndV);
println(ScanR);
println(DelayT);
println(ASVmod);
println(Go);
}
if (Modetorun.equals("CV")) {
Starting_Voltage();
End_Voltage();
Scan_Rate();
Delay_Time();
serial.write(CVmod); // prg 2 for CV
delay(100);
serial.write(StartV);
delay(100);
serial.write(EndV);
delay(100);
serial.write(ScanR);
delay(100);
//serial.write(DelayT);
//delay(100);
serial.write(Go);
println(StartV);
println(EndV);
println(ScanR);
println(CVmod);
println(Go);
}
if (Modetorun.equals("TIMED")) {
Starting_Voltage();
End_Voltage();
InitialV_Time();
FinalV_Time();
serial.write(TIMEDmod); // prg 3 for TIMED
delay(100);
serial.write(StartV);
delay(100);
serial.write(EndV);
delay(100);
serial.write(InitVT);
delay(100);
serial.write(FnlVT);
delay(100);
serial.write(Go);
println(StartV);
println(EndV);
println(InitVT);
println(FnlVT);
println(TIMEDmod);
println(Go);
}
if (Modetorun.equals("LOG-ASV")) {
Starting_Voltage();
End_Voltage();
Scan_Rate();
Delay_Time();
Number_of_Runs();
Run_Intervale();
serial.write(LOG_ASVmod); // prg 4 for LOG-ASV
delay(100);
serial.write(StartV);
delay(100);
serial.write(EndV);
delay(100);
serial.write(ScanR);
delay(100);
serial.write(DelayT);
delay(100);
serial.write(Nor);
delay(100);
serial.write(Rint);
delay(100);
serial.write(Go);
println(StartV);
println(EndV);
println(ScanR);
println(DelayT);
println(LOG_ASVmod);
println(Nor);
println(Rint);
println(Go);
//read_serialASV();///////////////////////////////*************************///////////////////////
}
i=0; // global variable. used to itterate serail read and indicate there is data to draw the chart.
updatechart = i; // used to limit the the updating of the graphes to once very 2 runs
numrun = 0; // for LOG-ASV mode. is incremented everytime "run" is passed over the serial port
logData(file1, "", false);
while (cData!='&') { ////////read paramaters/////////
//while (serial.available() <= 0) {}
//serial.bufferUntil('\n');//}
if (serial.available() > 0) {
cData = serial.readChar();//cData = serial.readChar();
sData2 = str(cData);
logData(file1, sData2, true);
if (cData == '&') {
if (Modetorun.equals("ASV")) {
println("paramaters recieved ASV");
}
if (Modetorun.equals("CV")) {
println("paramaters recieved CV");
}
if (Modetorun.equals("TIMED")) {
println("paramaters recieved TIMED");
}
if(Modetorun.equals("LOG-ASV")){
println("paramaters recieved LOG-ASV");
}
}
}
}
cData = 'a';
} // lvsr == false
gotparams = true;
///////////////////////////////////////////////////////////////////////////read voltammetry data //////////////////////////////////////////////////////////
if (cData!='@') {
if (serial.available () <= 0) { //changed from while 4/27/13
}
if (serial.available() > 0 && bool == true) {
sData2 = serial.readString();
logData(file1, sData2, true); //logData(file1,getDateTime() + sData,true);logData(file1,sData,true);
strtochar = sData2.toCharArray();
String[] endsig = match(sData2,"@");
if (endsig!=null){ //if (cData == '*') {*
println("stop");
bool = false;
gotparams = false;
myTextarea2.setColor(0xff036C09);
myTextarea2.setText("FINISHED");
}
String[] runnum = match(sData2,"r");
if (runnum!=null){ //if (cData == '*') {*
println("run-"+(numrun+1));
myTextarea2.setText("run-"+(numrun+1));
runnum = null;
numrun+=1;
}
////////////////////////////////////////////////////////////////////////////////////////////////////////// graph datat//////////////////////////////////////////////
if (bool == true && Modetorun.equals("ASV") || Modetorun.equals("LOG-ASV")) { //if (bool == true && Modetorun=="ASV") {
read_serialASV();
}
if (bool == true && Modetorun.equals("CV") || Modetorun.equals("TIMED")) { //if (bool == true && Modetorun=="CV" || Modetorun=="TIMED") {
read_serialCV();
}
///////////////////////graph//////
if (V.length>2 && V.length==I1.length) { //if (i!=0) { (V.length>3)
if (Modetorun.equals("ASV") || Modetorun.equals("LOG-ASV")) { //if (Modetorun=="ASV") {
//if(i==updatechart+3){
lineChart.setMaxX(max(V)+.05f);
lineChart.setMaxY(max(Idif)+.05f);
lineChart.setMinX(min(V)-.05f);
lineChart.setMinY(min(Idif)-.05f);
lineChart.setData(V, Idif);
lineChartIf.setMaxX(max(V)+.05f);
lineChartIf.setMaxY(max(I2)+.05f);
lineChartIf.setMinX(min(V)-.05f);
lineChartIf.setMinY(min(I2)-.05f);
lineChartIf.setData(V, I2);
lineChartIb.setMaxX(max(V)+.05f);
lineChartIb.setMaxY(max(I1)+.05f);
lineChartIb.setMinX(min(V)-.05f);
lineChartIb.setMinY(min(I1)-.05f);
lineChartIb.setData(V, I1);
try{
lineChart.draw(280, 320, 350, 300);
lineChartIf.draw(220, 80, 250, 200);
lineChartIb.draw(490, 80, 250, 200);
}
catch(Exception e){
if(V.length >2){
V = subset(V,1);
I1= subset(I1,1);
I2= subset(I2,1);
Idif = subset(Idif,1);
println("exception");
}
}
}
if (Modetorun.equals("CV") || Modetorun.equals("TIMED")) { //if (Modetorun=="CV" || Modetorun == "TIMED") {
if(i>=updatechart+2){
lineChart.setMaxX(max(V));//+.05
lineChart.setMaxY(max(I1)); //Idif
lineChart.setMinX(min(V));
lineChart.setMinY(min(I1)); //Idif
lineChart.setData(V, I1); // Idif
//delay(1);
try{
lineChart.draw(230, 120, 450, 450);
}
catch(Exception e){
if(V.length >2){
V = subset(V,1);
I1= subset(I1,1);
I2= subset(I2,1);
Idif = subset(Idif,1);
println("exception");
}
}
updatechart = i;
}
}
} // end if(i>0)
} // end serial.availabel
} // end if(cData!='*')
//////////////////////////////////////////////////******************************////////////////////////////////////
} // end of run
if (bool == true && comList.length==0) {
bool = false;
warning.show();
warningtxt.setText("No COM port connection");
println("comm not connected");
}
}///////////////////////////End Draw////////////////////////
public void Connect() { // conect to com port bang
if(Comselected==false){
try{
serial = new Serial(this, comList[Ss], 9600);
println(comList[Ss]);
myTextarea2.setText("CONNECTED");
Comselected = true;
}
catch (Exception e){
warning.show();
warningtxt.setText("Some type of com port error");
println("Some type of com port error. Restart program");
myTextarea2.setText("COM ERROR");
}
}
else{
println("already connected");
}
}
public void Save_run() { // set path bang
selectInput("Select a file to process:", "fileSelected");
}
public void fileSelected(File selection) {
if (selection == null) {
println("Window was closed or the user hit cancel.");
}
else {
file2 = selection.getAbsolutePath();
println("User selected " + file2);
// myTextarea.setText(file2);
///////////////////////////////////////
// String file2 = "C:/Users/Ben/Documents/Voltammetry Stuff/log/data.txt";
try{
saveStream(file2,file1);
}
catch(Exception e){}
/////////////////////////////////////////
}
}
public void Start_Run() { // start run bang
bool = true;
myTextarea2.setColor(0xffD8070E);
myTextarea2.setText("RUNNING SCAN");
}
public void Intergrate_Data() { // intergrate data bang
win.show();
} //intergrate bag for popup window is in intergrat_window tab//
public void charts_gic_setup(){
////////////////////////////////gicentre charts///
lineChart = new XYChart(this);
lineChart.setData(new float[] {1, 2, 3}, new float[] {1, 2, 3});
lineChart.showXAxis(true);
lineChart.showYAxis(true);
lineChart.setXAxisLabel("Potential (V)");
lineChart.setYAxisLabel("Current");
//lineChart.setMinY(0);
lineChart.setYFormat("##.##");
lineChart.setXFormat("##.##");
// Symbol colours
lineChart.setPointColour(color(234, 28, 28));
lineChart.setPointSize(5);
lineChart.setLineWidth(2);
lineChartIf = new XYChart(this);
lineChartIf.setData(new float[] {1, 2, 3}, new float[] {1, 2, 3});
lineChartIf.showXAxis(true);
lineChartIf.showYAxis(true);
lineChartIf.setXAxisLabel("Potential (V)");
lineChartIf.setYAxisLabel("Current");
//lineChartIf.setMinY(0);
lineChartIf.setYFormat("##.##");
lineChartIf.setXFormat("##.##");
// Symbol colours
lineChartIf.setPointColour(color(234, 28, 28));
lineChartIf.setPointSize(5);
lineChartIf.setLineWidth(2);
lineChartIb = new XYChart(this);
lineChartIb.setData(new float[] {1, 2, 3}, new float[] {1, 2, 3});
lineChartIb.showXAxis(true);
lineChartIb.showYAxis(true);
lineChartIb.setXAxisLabel("Potential (V)");
lineChartIb.setYAxisLabel("Current");
//lineChartIb.setMinY(0);
lineChartIb.setYFormat("##.##");
lineChartIb.setXFormat("##.##");
// Symbol colours
lineChartIb.setPointColour(color(234, 28, 28));
lineChartIb.setPointSize(5);
lineChartIb.setLineWidth(2);
}/////////////////////////////////////////////////end charts_gic_setup///////////////////////////////////////////////
public void cp5_controllers_setup(){
////////////////////////////////////////////////Text Fields//////////////////////////////
cp5 = new ControlP5(this); //cp5 = new ControlP5(this);
PFont font = createFont("arial", 20);
PFont font2 = createFont("arial", 16);
PFont font3 = createFont("arial",12);
Starting_Voltage = cp5.addTextfield("Starting_Voltage")
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)//(#FFFEFC)
.setColorForeground(0xffAA8A16)
.setPosition(20, 100)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("-400");
controlP5.Label svl = Starting_Voltage.captionLabel();
svl.setFont(font2);
svl.toUpperCase(false);
svl.setText("Initial Voltage (mV)");
;
End_Voltage = cp5.addTextfield("End_Voltage")
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 170)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("400");
controlP5.Label evl = End_Voltage.captionLabel();
evl.setFont(font2);
evl.toUpperCase(false);
evl.setText("End Voltage (mV)");
;
Scan_Rate = cp5.addTextfield("Scan_Rate")
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 240)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("100");
controlP5.Label srl = Scan_Rate.captionLabel();
srl.setFont(font2);
srl.toUpperCase(false);
srl.setText("Scan Rate (mV/sec)");
;
Delay_Time = cp5.addTextfield("Delay_Time")
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 310)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("30");
controlP5.Label dtl = Delay_Time.captionLabel();
dtl.setFont(font2);
dtl.toUpperCase(false);
dtl.setText("Plating Time (sec)");
;
InitialV_Time = cp5.addTextfield("InitialV_Time")
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 240)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("100");
controlP5.Label invl = InitialV_Time.captionLabel();
invl.setFont(font2);
invl.toUpperCase(false);
invl.setText("Initial V Time (msec)");
;
FinalV_Time = cp5.addTextfield("FinalV_Time") // time based txt field
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 310)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("60");
controlP5.Label fnlvl = FinalV_Time.captionLabel();
fnlvl.setFont(font2);
fnlvl.toUpperCase(false);
fnlvl.setText("Final V Time (msec)");
;
Number_of_Runs = cp5.addTextfield("Number_of_Runs") // time based txt field
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 380)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("10");
controlP5.Label norl = Number_of_Runs.captionLabel();
norl.setFont(font2);
norl.toUpperCase(false);
norl.setText("Number of Runs");
;
Run_Intervale = cp5.addTextfield("Run_Intervale") // time based txt field
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)
.setPosition(20, 450)
.setSize(100, 40)
.setFont(font)
.setFocus(false)
.setText("10");
controlP5.Label ril = Run_Intervale.captionLabel();
ril.setFont(font2);
ril.toUpperCase(false);
ril.setText("Run Interval (min)");
;
///////////////////////////////////////text area//////////////////////////
/* myTextarea = cp5.addTextarea("txt") // save path text area
.setPosition(280, 5)
.setSize(300, 45)
.setFont(font3)
.setLineHeight(20)
.setColor(#030302)
.setColorBackground(#CEC6C6)
.setColorForeground(#AA8A16)//#CEC6C6
; */
myTextarea2 = cp5.addTextarea("txt2") // status and com port text area
.setPosition(300, 10)
.setSize(100, 20) //was 30
.setFont(createFont("arial", 12)) //(font)
.setLineHeight(10)
.setColor(0xff030302)
.setColorBackground(0xffCEC6C6)
.setColorForeground(0xffAA8A16)//#CEC6C6
;
/////////////////////////////Bang's///////////////////////////////////////////////////////////
cp5.addBang("Start_Run")
.setColorBackground(0xffFFFEFC)//#FFFEFC
.setColorCaptionLabel(0xff030302) //#030302
.setColorForeground(0xffAA8A16)
.setColorActive(0xff06CB49)
.setPosition(20, 520)
.setSize(150, 40)
.setTriggerEvent(Bang.RELEASE)
.setLabel("Start Run") //
.getCaptionLabel().align(ControlP5.CENTER, ControlP5.CENTER) //.setLabel("Start_Run")
;
cp5.addBang("Connect")
.setColorBackground(0xffFFFEFC)//#FFFEFC
.setColorCaptionLabel(0xff030302) //#030302
.setColorForeground(0xffAA8A16)
.setPosition(240, 10)
.setSize(40, 20)
.setTriggerEvent(Bang.RELEASE)
.getCaptionLabel().align(ControlP5.CENTER, ControlP5.CENTER) //.setLabel("Start_Run")
;
cp5.addBang("Save_run")
.setColorBackground(0xffFFFEFC)//#FFFEFC
.setColorCaptionLabel(0xff030302) //#030302
.setColorForeground(0xffAA8A16)
.setPosition(450, 10)
.setSize(100, 20)
.setTriggerEvent(Bang.RELEASE)
.setLabel("Save Run")
.getCaptionLabel().align(ControlP5.CENTER, ControlP5.CENTER) //.setLabel("Start_Run")
;
cp5.addBang("Intergrate_Data")
.setColorBackground(0xffFFFEFC)//#FFFEFC
.setColorCaptionLabel(0xff030302) //#030302
.setColorForeground(0xffAA8A16)
.setPosition(600, 35)
.setSize(80, 20)
.setTriggerEvent(Bang.RELEASE)
.setLabel("Intergrate Peaks")
.getCaptionLabel().align(ControlP5.CENTER, ControlP5.CENTER) //.setLabel("Start_Run")
;
//////////////////////////////////////////Dropdownlist////////////////////////////////////////
ports = cp5.addDropdownList("list-1", 130, 30, 100, 84)
.setBackgroundColor(color(200))
.setItemHeight(20)
.setBarHeight(20)
.setColorBackground(color(60))
.setColorActive(color(255, 128))
.setUpdate(true)
;
ports.captionLabel().set("Select COM port");
ports.captionLabel().style().marginTop = 3;
ports.captionLabel().style().marginLeft = 3;
ports.valueLabel().style().marginTop = 3;
comList = serial.list();
for (int i=0; i< comList.length; i++)
{
ports.addItem(comList[i], i);
}
mode = cp5.addDropdownList("list-2", 10, 30, 100, 84) //mode = cp5.addDropdownList("list-2", 650, 30, 100, 84)
.setBackgroundColor(color(200))
.setItemHeight(20)//.setItemHeight(20
.setBarHeight(20)//.setBarHeight(15)
.setColorBackground(color(60))
.setColorActive(color(255, 128))
.setUpdate(true)
;
mode.captionLabel().set("Select Mode");
mode.captionLabel().style().marginTop = 3;
mode.captionLabel().style().marginLeft = 3;
mode.valueLabel().style().marginTop = 3;
mode.setScrollbarWidth(10);
mode.addItem("ASV", 0);
mode.addItem("CV", 1);
mode.addItem("Chrono-Amp",2);
mode.addItem("LOG-ASV",3);
}//////////////////////////////////end cp5_controllers-setup/////////////////////////////////////////////////
public void controlEvent(ControlEvent theEvent) {
if (theEvent.isGroup())
{
if (theEvent.name().equals("list-1")) {//if (theEvent.getGroup().equals("list-1")) {
float S = theEvent.group().value();
Ss = PApplet.parseInt(S);
//Comselected = true;
}
if (theEvent.name().equals("list-2")) {
float Mod = theEvent.group().value(); //float Mod = theEvent.group().value();
Modi = PApplet.parseInt(Mod);
String [][] Modetype = mode.getListBoxItems(); // String [] Modetype = theEvent.group().Items();
Modetorun = Modetype[Modi][0]; //Modetorun = Modetype[Modi][Modi];
Modesel = true;
println(Modetorun);
}
}
}
public void logData( String fileName, String newData, boolean appendData) //char//void logData( String fileName, String newData, boolean appendData)
{
BufferedWriter bw=null;
try { //try to open the file
FileWriter fw = new FileWriter(fileName, appendData);
bw = new BufferedWriter(fw);
bw.write(newData);// + System.getProperty("line.separator"));
}
catch (IOException e) {
}
finally {
if (bw != null) { //if file was opened try to close
try {
bw.close();
}
catch (IOException e) {
}
}
}
}
public void read_serialASV() {
for(int l=0;l<strtochar.length;l++){
cData = strtochar[l];
if (cData!='\n') {
sData3 = sData3+str(cData);
}
if (cData =='\n') {
//int i =0;
sData = split(sData3, "\t");
sData = trim(sData);
// println("sDat "+sData.length);
if (sData.length ==3) { //if(sData.length >1){
float[] fData= PApplet.parseFloat(sData);
if (i==0) {
V[i] = fData[0];
I1[i]=fData[1]; // g1[i]=fmap[i];
I2[i]=fData[2]; // g2[i]=fmap2[i];
}
if (i>0) {
V = append(V, fData[0]);
I1 = append(I1, fData[1]); //g1 = append(g1,fmap[i]);
I2 = append(I2, fData[2]); // g2 = append(g2,fmap2[i]);
}
//Idif[i] = I2[i]-I1[i];
i +=1;// ++i;
//sData3 = "";
}
sData3 = " ";
}
Idif = newIdif;
for (int j=0;j<I1.length;j++) {
if (j==0) {
Idif[j] = I2[j]-I1[j];
}
else {
Idif = append(Idif, (I2[j]-I1[j]));
}
}
}
} // end read_serialASV
public void read_serialCV() {
for(int l=0;l<strtochar.length;l++){