Add complete bitgroom support to NCZarr

re: PR #2088
re: PR #2130
replaces: #2140

Changes:
* Add NCZarr-specific quantize functions to the dispatch table.
* Copy (modified) quantize code from libhdf5 to NCZarr
* Add quantize invocation to zvar.c
* Add support for _QuantizeBitgroomNumberOfSignificantDigits
and _QuantizeGranularBitgroomNumberOfSignificantDigits to ncgen.
* Modify nc_test4/tst_quantize.c to allow it to be used both for hdf5
  and for nczarr.
* Make dap4 properly handle quantize functions in dispatch table.
* Add quantize attribute support to ncgen.

Other changes:
* Caught and fixed some S3 problems
* Fixed some nczarr fillvalue problems.
* Fixed some nczarr cache problems.
* Cleanup some flaws in libdispatch/dinfermodel.c
* Allow byterange requests to S3 be readable by dinfermodel.c/check_file_type
* Remove the libnczarr ztracedispatch code (big change).

.github/workflows/run_tests_osx.yml

@@ -7,7 +7,7 @@
 name: Run macOS-based netCDF Tests
 
 
-on: [ pull_request ]
+on: [pull_request]
 
 jobs:
 

.github/workflows/run_tests_ubuntu.yml

@@ -4,8 +4,7 @@
 
 name: Run Ubuntu/Linux netCDF Tests
 
-on: [ pull_request ]
-
+on: [pull_request]
 
 jobs:
 

RELEASE_NOTES.md

@@ -7,6 +7,7 @@ This file contains a high-level description of this package's evolution. Release
 
 ## 4.8.2 - TBD
 
+* [Enhancement] Add complete bitgroom support to NCZarr. See [Github #????](https://github.com/Unidata/netcdf-c/pull/????).
 * [Bug Fix] Clean up the handling of deeply nested VLEN types. Marks nc_free_vlen() and nc_free_string as deprecated in favor of ncaux_reclaim_data(). See [Github #2179(https://github.com/Unidata/netcdf-c/pull/2179).
 * [Bug Fix] Make sure that netcdf.h accurately defines the flags in the open/create mode flags. See [Github #2183](https://github.com/Unidata/netcdf-c/pull/2183).
 * [Enhancement] Improve support for msys2+mingw platform. See [Github #2171](https://github.com/Unidata/netcdf-c/pull/2171).

acinclude.m4

@@ -384,3 +384,4 @@ MOSTLYCLEANFILES += $(valgrind_log_files)
 	AC_SUBST([VALGRIND_CHECK_RULES])
 	m4_ifdef([_AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE([VALGRIND_CHECK_RULES])])
 ])
+AC_DEFUN([_AC_FINALIZE],[])

include/ncuri.h

@@ -79,6 +79,9 @@ EXTERNL int ncurisetquery(NCURI*,const char* query);
 /* Replace the fragment list */
 EXTERNL int ncurisetfragments(NCURI*, const char* fragments);
 
+/* Rebuild the uri */
+EXTERNL int ncurirebuild(NCURI*);
+
 /* Replace a specific &key=...& in uri fragment */
 EXTERNL int ncurisetfragmentkey(NCURI* duri,const char* key, const char* value);
 

libdap4/ncd4dispatch.c

@@ -763,6 +763,42 @@ NCD4_get_var_chunk_cache(int ncid, int p2, size_t* p3, size_t* p4, float* p5)
     return (ret);
 }
 
+static int
+NCD4_inq_var_quantize(int ncid, int varid, int *quantize_modep, int *nsdp)
+{
+    NC* ncp;
+    int ret;
+    int substrateid;
+    if((ret = NC_check_id(ncid, (NC**)&ncp)) != NC_NOERR) return (ret);
+    substrateid = makenc4id(ncp,ncid);
+    ret = nc_inq_var_quantize(substrateid, varid, quantize_modep, nsdp);
+    return (ret);
+}
+
+static int
+NCD4_inq_var_filter_ids(int ncid, int varid, size_t* nfilters, unsigned int* filterids)
+{
+    NC* ncp;
+    int ret;
+    int substrateid;
+    if((ret = NC_check_id(ncid, (NC**)&ncp)) != NC_NOERR) return (ret);
+    substrateid = makenc4id(ncp,ncid);
+    ret = nc_inq_var_filter_ids(substrateid, varid, nfilters, filterids);
+    return (ret);
+}
+
+static int
+NCD4_inq_var_filter_info(int ncid, int varid, unsigned int id, size_t* nparams, unsigned int* params)
+{
+    NC* ncp;
+    int ret;
+    int substrateid;
+    if((ret = NC_check_id(ncid, (NC**)&ncp)) != NC_NOERR) return (ret);
+    substrateid = makenc4id(ncp,ncid);
+    ret = nc_inq_var_filter_info(substrateid, varid, id, nparams, params);
+    return (ret);
+}
+
 /**************************************************/
 /*
 Following functions are overridden to handle 
@@ -970,9 +1006,9 @@ NCD4_def_var_filter,
 NCD4_set_var_chunk_cache,
 NCD4_get_var_chunk_cache,
 
-NC_NOTNC4_inq_var_filter_ids,
-NC_NOTNC4_inq_var_filter_info,
+NCD4_inq_var_filter_ids,
+NCD4_inq_var_filter_info,
 
 NC_NOTNC4_def_var_quantize,
-NC_NOTNC4_inq_var_quantize,
+NCD4_inq_var_quantize,
 };