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DESCRIPTION
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Package: scpdata
Type: Package
Title: Single-Cell Proteomics Data Package
Version: 1.15.1
Authors@R:
c(person("Christophe", "Vanderaa",
email = "[email protected]",
comment = c(ORCID = "0000-0001-7443-5427"),
role = c("aut", "cre")),
person("Laurent", "Gatto",
email = "[email protected]",
comment = c(ORCID = "0000-0002-1520-2268"),
role = "aut"),
person("Enes", "Ayar",
email = "[email protected]",
comment = c(ORCID = "0000-0001-8881-9800"),
role = "dtc"),
person("Samuel", "Grégoire",
email = "[email protected]",
comment = c(ORCID = "0000-0002-0900-7677"),
role = "dtc"))
Description: The package disseminates mass spectrometry (MS)-based
single-cell proteomics (SCP) datasets. The data were collected
from published work and formatted using the `scp` data structure.
The data sets contain quantitative information at spectrum,
peptide and/or protein level for single cells or minute sample
amounts.
Depends:
R (>= 4.2.0),
QFeatures,
ExperimentHub
Imports:
utils,
AnnotationHub,
SingleCellExperiment,
S4Vectors
Suggests:
scp,
magrittr,
dplyr,
knitr,
BiocStyle,
BiocCheck,
rmarkdown,
testthat
biocViews:
ExperimentData,
ExpressionData,
ExperimentHub,
ReproducibleResearch,
MassSpectrometryData,
Proteome,
SingleCellData,
PackageTypeData
License: GPL-2
Encoding: UTF-8
LazyData: false
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2