diff --git a/code/GPRs/getGenesFromGrRules.m b/code/GPRs/getGenesFromGrRules.m index 176ec081..61e69778 100644 --- a/code/GPRs/getGenesFromGrRules.m +++ b/code/GPRs/getGenesFromGrRules.m @@ -1,9 +1,9 @@ -function [genes,rxnGeneMat] = getGenesFromGrRules(grRules) +function [genes,rxnGeneMat] = getGenesFromGrRules(grRules, originalGenes) %getGenesFromGrRules Extract gene list and rxnGeneMat from grRules array. % % USAGE: % -% [genes,rxnGeneMat] = getGenesFromGrRules(grRules); +% [genes,rxnGeneMat] = getGenesFromGrRules(grRules, originalGenes); % % INPUTS: % @@ -12,6 +12,7 @@ % NOTE: Boolean operators can be text ("and", "or") or % symbolic ("&", "|"), but there must be a space % between operators and gene names/IDs. +% originalGenes The original gene list from the model as reference % % OUTPUTS: % @@ -24,6 +25,11 @@ % +% handle input arguments +if nargin < 2 + originalGenes = []; +end + % check if the grRules use written or symbolic boolean operators if any(contains(grRules,{'&','|'})) % fix some potential missing spaces between parentheses and &/| @@ -50,6 +56,14 @@ nonEmpty = ~cellfun(@isempty,rxnGenes); genes = unique([rxnGenes{nonEmpty}]'); +if ~isempty(originalGenes) + if ~isequal(sort(originalGenes), sort(genes)) + error('The grRules and original gene list are inconsistent!'); + else + genes = originalGenes; + end +end + % construct new rxnGeneMat (if requested) if nargout > 1 rxnGeneCell = cellfun(@(rg) ismember(genes,rg),rxnGenes,'UniformOutput',false); diff --git a/code/addBoundaryMets.m b/code/addBoundaryMets.m index 8861695d..c00ff1b5 100644 --- a/code/addBoundaryMets.m +++ b/code/addBoundaryMets.m @@ -104,9 +104,15 @@ % add new boundary mets to the model metsToAdd.mets = add_bound_met_IDs; metsToAdd.metNames = add_bound_mets; -metsToAdd.compartments = 'b'; +metsToAdd.compartments = repmat({'b'}, size(add_bound_mets)); metsToAdd.unconstrained = ones(size(add_bound_mets)); -new_model = addMets(model,metsToAdd); +if ~isempty(add_bound_met_IDs) + new_model = addMets(model,metsToAdd); +else + fprintf('No Boundary metabolites were added to the model!\n'); + new_model = model; + return +end % now add the boundary mets to the model S-matrix S = new_model.S; diff --git a/code/annotateGEM.m b/code/annotateGEM.m index 8c823d2e..f43e2149 100644 --- a/code/annotateGEM.m +++ b/code/annotateGEM.m @@ -1,10 +1,13 @@ -function annModel = annotateGEM(model,annType,addMiriams,addFields,overwrite) +function annModel = annotateGEM(model,annPath,annType,addMiriams,addFields,overwrite) % Add reaction, metabolite, and/or gene annotation to a model. % % Input: % % model Model structure. % +% annPath Path to the annotation files, which suppose to be named as +% 'reactions.tsv', 'metabolites.tsv', and 'genes.tsv'。 +% % annType String or cell array of strings specifying the type(s) of % annotation data to add: 'rxn', 'met', and/or 'gene'. To % add all annotation types, use 'all'. @@ -35,27 +38,32 @@ % % Usage: % -% annModel = annotateGEM(model,annType,addMiriams,addFields,overwrite); +% annModel = annotateGEM(model,annPath,annType,addMiriams,addFields,overwrite); % %% Inputs and setup -if nargin < 2 || isempty(annType) || strcmpi(annType,'all') +if nargin < 2 + [ST, I] = dbstack('-completenames'); + annPath = strcat(fileparts(ST(I).file),'/../model'); +end + +if nargin < 3 || isempty(annType) || isequal(annType,'all') annType = {'rxn','met','gene'}; elseif ~all(ismember(annType,{'rxn','met','gene','reaction','metabolite'})) error('annType input(s) not recognized. Valid options are "rxn", "met", and/or "gene", or "all"'); end -if nargin < 3 || isempty(addMiriams) +if nargin < 4 || isempty(addMiriams) addMiriams = true; end -if nargin < 4 || isempty(addFields) +if nargin < 5 || isempty(addFields) addFields = true; end -if nargin < 5 +if nargin < 6 overwrite = true; end @@ -96,9 +104,7 @@ % load reaction annotation data if any(ismember({'rxn','reaction'},lower(annType))) - [ST, I] = dbstack('-completenames'); - path = fileparts(ST(I).file); - tmpfile = fullfile(path,'../model','reactions.tsv'); + tmpfile = fullfile(annPath,'reactions.tsv'); rxnAssoc = importTsvFile(tmpfile); % strip "RHEA:" prefix from Rhea IDs since it should not be included in @@ -119,9 +125,7 @@ % load metabolite annotation data if any(ismember({'met','metabolite'},lower(annType))) - [ST, I] = dbstack('-completenames'); - path = fileparts(ST(I).file); - tmpfile = fullfile(path,'../model','metabolites.tsv'); + tmpfile = fullfile(annPath,'metabolites.tsv'); metAssoc = importTsvFile(tmpfile); % ChEBI IDs should be of the form "CHEBI:#####" @@ -140,9 +144,7 @@ % load and organize gene annotation data if ismember('gene',lower(annType)) - [ST, I] = dbstack('-completenames'); - path = fileparts(ST(I).file); - tmpfile = fullfile(path,'../model','genes.tsv'); + tmpfile = fullfile(annPath,'genes.tsv'); geneAssoc = importTsvFile(tmpfile); % add geneEnsemblID field if missing @@ -275,9 +277,18 @@ % get fields and their types f = fieldnames(allAssoc); - fieldType = repmat({'rxn'}, numel(f), 1); - fieldType(ismember(f, fieldnames(metAssoc))) = {'met'}; - fieldType(ismember(f, fieldnames(geneAssoc))) = {'gene'}; + + if ~isempty(rxnAssoc) + fieldType = repmat({'rxn'}, numel(f), 1); + end + + if ~isempty(metAssoc) + fieldType(ismember(f, fieldnames(metAssoc))) = {'met'}; + end + + if ~isempty(geneAssoc) + fieldType(ismember(f, fieldnames(geneAssoc))) = {'gene'}; + end % add individual ID fields to the model for i = 1:numel(f) diff --git a/code/curateReactionNames.py b/code/curateReactionNames.py new file mode 100644 index 00000000..6ce3346a --- /dev/null +++ b/code/curateReactionNames.py @@ -0,0 +1,68 @@ +"""Fetch Human-GEM reaction names from KEGG +Original file is located at + https://colab.research.google.com/drive/17X0Qx0H4pwjZjLLWHnpp5ac2daH9hOxs +""" + +import requests +import re +import yaml +import pandas + +"""Get all the KEGG reactions via their API, and save the result to a file.""" + +KEGG_REACTIONS = 'kegg_reactions.txt' +HG_YAML = '../model/Human-GEM.yml' +F_YAML = '../model/curated-Human-GEM.yml' + +with open(KEGG_REACTIONS,'w') as f: + r = requests.get('http://rest.kegg.jp/list/reaction/') + f.write(r.text) + +"""Extract the KEGG reactions as key-value pairs.""" + +raw_reactions = open(KEGG_REACTIONS, 'r') +raw_reaction_lines = raw_reactions.readlines() + +reaction_id = re.compile('(?:^rn\:)(R\d+)') +reaction_name = re.compile('(?:\t)([^;]+)(?:;)') +kegg_reactions = {} +for line in raw_reaction_lines: + try: + kegg_reactions[reaction_id.search(line).group(1)] = reaction_name.search(line).group(1) + except: + kegg_reactions[reaction_id.search(line).group(1)] = '' +# print(kegg_reactions[]) + +"""Fetch Human-GEM reactions from the TSV annotation.""" + +hg_annotation = pandas.read_csv('../model/reactions.tsv', sep='\t', index_col=0) + +""" Traverse the YAML, and for each line that looks like a reaction definition, extract the reaction identifier, and get the matching KEGG id. Then, change the next line that contains the reaction name to the name provided by KEGG.""" + +with open(HG_YAML, 'r') as inputf: + with open(F_YAML, 'w') as outputf: + count = 0 + count_blank = 0 + while True: + reaction_id = re.compile('(?:^ - id: ")(MAR\d+)') + reaction_name = re.compile('(?:^ - name: ")()("$)') + try: + line = inputf.readline() + r_id = reaction_id.search(line).group(1) + outputf.write(line) + line = inputf.readline() + r_name = reaction_name.search(line).group(1) + kegg_id = hg_annotation.loc[r_id]['rxnKEGGID'] + if kegg_id and r_name == "": + if kegg_reactions[kegg_id] == "": + count_blank = count_blank + 1 + else: + line = ' - name: "' + kegg_reactions[kegg_id] + '"\n' + count = count + 1 + except: + None + outputf.write(line) + if not line: + break + print('Reaction names adopted from KEGG: ' + str(count)) + print('Blank names also blank in KEGG: ' + str(count_blank)) diff --git a/code/gapfill4EssentialTasks.m b/code/gapfill4EssentialTasks.m index 827f938d..83aed0f3 100644 --- a/code/gapfill4EssentialTasks.m +++ b/code/gapfill4EssentialTasks.m @@ -57,7 +57,7 @@ % load metabolic task for growth under Ham's media [ST, I] = dbstack('-completenames'); path = fileparts(ST(I).file); -essentialTasks = fullfile(path,'../data/metabolicTasks','metabolicTasks_Essential.xlsx'); +essentialTasks = fullfile(path,'../data/metabolicTasks','metabolicTasks_Essential.txt'); taskStruct = parseTaskList(essentialTasks); %taskStruct = taskStruct(end); @@ -120,10 +120,10 @@ outputModel = inputModel; -% block all biomass equations -%ind = find(startsWith(outputModel.rxns,'biomass')); -%outputModel.ub(ind) = 0; -%outputModel.lb(ind) = 0; +% block human biomass equations +ind = find(strcmp(outputModel.rxns,'MAR13082')); +outputModel.ub(ind) = 0; +outputModel.lb(ind) = 0; outputModel.c(:) = 0; % reset object function to "biomass_components" diff --git a/code/getModelFromOrthology.m b/code/getModelFromOrthology.m index e7170820..2497b1cf 100644 --- a/code/getModelFromOrthology.m +++ b/code/getModelFromOrthology.m @@ -43,7 +43,8 @@ templateModel.description = ''; templateModel.version = ''; templateModel.annotation = structfun(@(x) '',templateModel.annotation,'UniformOutput',0); - +templateModel.annotation.defaultLB = -1000; +templateModel.annotation.defaultUB = 1000; % find the index of non-empty grRules before replacing genes preNonEmptyRuleInd = find(~cellfun(@isempty, templateModel.grRules)); diff --git a/code/io/importYaml.m b/code/io/importYaml.m index ac6486fe..a4af9f80 100644 --- a/code/io/importYaml.m +++ b/code/io/importYaml.m @@ -25,6 +25,25 @@ error('Yaml file %s cannot be found', string(yamlFilename)); end +if verLessThan('matlab','9.9') %readlines introduced 2020b + fid=fopen(yamlFilename); + line_raw=cell(1000000,1); + while ~feof(fid) + line_raw{i}=fgetl(fid); + i=i+1; + end + line_raw(i:end)=[]; + line_raw=string(line_raw); +else + line_raw=readlines(yamlFilename'); +end + +line_key=regexprep(line_raw,'^ *-? ([^:]+)(:).*','$1'); +line_key=regexprep(line_key,'(.*!!omap)|(---)',''); + +line_value = regexprep(line_raw, '[^":]+: "?(.+)"?$','$1'); +line_value = regexprep(line_value, '"',''); + % Define the required fields of humanGEM % There are a total of 37 fields in the model so far, the non-generic ones % are excluded here @@ -65,51 +84,59 @@ rightEqns={}; objRxns={}; - -% Load Yaml format model - -fid = fopen(yamlFilename); -if ~silentMode - fprintf('Start importing...\n'); -end - section = 0; -while ~feof(fid) - tline = fgetl(fid); - +for i=1:numel(line_key) + tline_raw = line_raw{i}; + tline_key = line_key{i}; + tline_value = line_value{i}; % import different sections - change_to_section = 0; - switch tline + switch tline_raw case '- metaData:' - change_to_section = 1; + section = 1; + if ~silentMode + fprintf('\t%d\n', section); + end + continue % Go to next line case '- metabolites:' - change_to_section = 2; + section = 2; + if ~silentMode + fprintf('\t%d\n', section); + end + continue case '- reactions:' - change_to_section = 3; + section = 3; readSubsystems = false; readEquation = false; rxnId = ''; + if ~silentMode + fprintf('\t%d\n', section); + end + continue case '- genes:' - change_to_section = 4; + section = 4; + if ~silentMode + fprintf('\t%d\n', section); + end + if readSubsystems + model.subSystems(end+1,1) = {subSystems}; %last entry from section 3 + readSubsystems = false; + end + continue case '- compartments: !!omap' - change_to_section = 5; - end - if logical(change_to_section) - section = change_to_section; - tline = fgetl(fid); - if ~silentMode - fprintf('\t%d\n', section); - end + section = 5; + if ~silentMode + fprintf('\t%d\n', section); + end + continue end - % skip over lines containing only omap - if any(regexp(tline, "- !!omap")) - tline = fgetl(fid); + % skip over empty keys + if isempty(tline_key) + continue; end % import metaData if section == 1 - [tline_key, tline_value] = tokenizeYamlLine(tline); switch tline_key case 'short_name' model.id = tline_value; @@ -134,7 +161,6 @@ % import metabolites: if section == 2 - [tline_key, tline_value] = tokenizeYamlLine(tline); switch tline_key case 'id' model = readFieldValue(model, 'mets', tline_value); @@ -155,7 +181,6 @@ % import reactions: if section == 3 - [tline_key, tline_value] = tokenizeYamlLine(tline); switch tline_key case 'id' model = readFieldValue(model, 'rxns', tline_value); @@ -164,13 +189,13 @@ model = readFieldValue(model, 'rxnNames', tline_value); case 'lower_bound' - model.lb = [model.lb; tline_value]; - leftEqns = [leftEqns; leftEquation]; - rightEqns = [rightEqns; rightEquation]; + model.lb(end+1,1) = {tline_value}; + leftEqns(end+1,1) = {leftEquation}; + rightEqns(end+1,1) = {rightEquation}; readEquation = false; case 'upper_bound' - model.ub = [model.ub; tline_value]; + model.ub(end+1,1) = {tline_value}; case 'gene_reaction_rule' model = readFieldValue(model, 'grRules', tline_value); @@ -182,7 +207,7 @@ model = readFieldValue(model, 'rxnFrom', tline_value); case 'objective_coefficient' - objRxns = [objRxns; rxnId]; + objRxns(end+1,1) = {rxnId}; case 'eccodes' model = readFieldValue(model, 'eccodes', tline_value); @@ -196,33 +221,35 @@ case 'confidence_score' model = readFieldValue(model, 'rxnConfidenceScores', tline_value); - model.subSystems = [model.subSystems; {subSystems}]; - readSubsystems = false; case 'metabolites' readEquation = true; - leftEquation = {''}; - rightEquation = {''}; - + leftEquation = ''; + rightEquation = ''; + if readSubsystems + model.subSystems(end+1,1) = {subSystems}; + readSubsystems = false; + end + otherwise if readSubsystems - subSystems = [subSystems; regexprep(tline_key, '"', '')]; - + subSystems(end+1,1) = {regexprep(tline_value, '^ *- (.+)$','$1')}; + % resolve the equation elseif readEquation - metCoeffi = regexp(regexprep(tline, ' +- ', ''), ': ', 'split'); - coeffi = str2num(metCoeffi{2}); - if coeffi < 0 + metCoeffi = regexp(regexprep(tline_raw, ' +- ', ''), ': ', 'split'); + coeffi = metCoeffi{2}; + if str2double(coeffi) < 0 if strcmp(leftEquation, '') - leftEquation = strcat(num2str(abs(coeffi), 12),32,metCoeffi{1}); + leftEquation = [coeffi(2:end),' ',metCoeffi{1}]; %Remove minus sign from coefficient else - leftEquation = strcat(leftEquation,' +',32,num2str(abs(coeffi), 12),32,metCoeffi{1}); + leftEquation = [leftEquation,' + ',coeffi(2:end),' ',metCoeffi{1}]; end else if strcmp(rightEquation, '') - rightEquation = strcat(32,num2str(coeffi, 12),32,metCoeffi{1}); + rightEquation = [' ',coeffi,' ',metCoeffi{1}]; else - rightEquation = strcat(rightEquation,' +',32,num2str(coeffi, 12),32,metCoeffi{1}); + rightEquation = [rightEquation,' + ',coeffi,' ',metCoeffi{1}]; end end end @@ -231,20 +258,16 @@ % import genes: if section == 4 - [tline_key, tline_value] = tokenizeYamlLine(tline); model = readFieldValue(model, 'genes', tline_value); end % import compartments: if section == 5 - [tline_key, tline_value] = tokenizeYamlLine(tline); - model.comps = [model.comps; tline_key]; - model.compNames = [model.compNames; tline_value]; + model.comps(end+1,1) = {tline_key}; + model.compNames(end+1,1) = {tline_value}; end end -fclose(fid); - % follow-up data processing if ~silentMode @@ -261,7 +284,7 @@ model.b = zeros(length(model.mets),1); model.c = double(ismember(model.rxns, objRxns)); -[genes, rxnGeneMat] = getGenesFromGrRules(model.grRules); +[genes, rxnGeneMat] = getGenesFromGrRules(model.grRules, model.genes); if isequal(sort(genes), sort(model.genes)) model.rxnGeneMat = rxnGeneMat; model.genes = genes; @@ -286,17 +309,5 @@ end function model = readFieldValue(model, fieldName, value) - model.(fieldName) = [model.(fieldName); {value}]; + model.(fieldName)(end+1,1) = {value}; end - -function [line_key, line_value]= tokenizeYamlLine(line) - line_key = regexp(line, '^ *-? ([^:]+)', 'tokens'); - line_key = char(line_key{1}); - line_value = regexp(line, '^ [^:]+: "?(.+)"?$', 'tokens'); - if isempty(line_value) - line_value = ''; - else - line_value = regexprep(line_value{1}, '"', ''); - line_value = char(line_value{1}); - end -end \ No newline at end of file diff --git a/code/tINIT/getAATripletReactions.m b/code/tINIT/getAATripletReactions.m new file mode 100644 index 00000000..7a62554a --- /dev/null +++ b/code/tINIT/getAATripletReactions.m @@ -0,0 +1,69 @@ +function rxns=getAATripletReactions(model, onlyRxnsWithoutGPRs) +% getAATripletReactions +% Finds all reactions that work with amino acid triplets (or doublets). These are +% not very useful in the model, and removing them simplifies the problem. +% +% model The model to be examined. +% onlyRxnsWithoutGPRs If true, the function only gets the rxns without GPRs +% +% rxns The resulting reactions +% +% Usage: rxns=getAATripletReactions(model, onlyRxnsWithoutGPRs) +% + +aminoAcidsCap = {'Alanine';'Arginine';'Asparagine';'Aspartate';'Cysteine';'Glutamine';'Glutamate';'Glycine';'Histidine';'Isoleucine';'Leucine';'Lysine';'Methionine';'Metheonine';'Phenylalanine';'Proline';'Serine';'Threonine';'Tryptophan';'Tyrosine';'Valine'}; +aminoAcidoyls = {'Alanyl';'Alaninyl';'Alanine';'Arginyl';'Asparaginyl';'Aspartyl';'Cystyl';'Cystinyl';'Cysteinyl';'Glutaminyl';'Glutamyl';'Glutamatsyl';'Glycyl';'Histidyl';'Histidinyl';'Isoleucyl';'Isolecyl';'Leucyl';'Lysyl';'Lysine';'Methionyl';'Methioninyl';'Phenylalanyl';'Phenylalanine';'Phenylalaninyl';'Prolyl';'Seryl';'Threonyl';'Tryptophanyl';'Tyrosyl';'Tyrosinyl';'Valyl'}; +singleTripletNames = {'Argtyrval'}; + +res = cell(length(model.metNames), 1); +for i = 1:length(res) + res{i} = strsplit(model.metNames{i}, '-'); +end + +matchingMets = false(length(res),1); +skippedMets = false(length(res),1); +for i = 1:length(matchingMets) + if any(strcmp(res{i}, singleTripletNames)) + matchingMets(i) = true; + end + if length(res{i}) > 1 + stringList = res{i}; + success = true; + for j = 1:(length(stringList)-1) + if ~any(strcmp(aminoAcidoyls, stringList{j})) + success = false; + break; + end + end + success = success & any(strcmp(aminoAcidsCap, stringList{length(stringList)})); + if (success) + matchingMets(i) = true; + else + skippedMets(i) = true; + end + end +end + +%sum(matchingMets)%490 +%sum(skippedMets)%3810 + +%model.metNames(matchingMets) %looks good + +%unique(model.metNames(skippedMets)) %looks good, didn't miss any as far as I could see + +%now investigate which reactions these are +rxnSel = (sum(model.S(matchingMets,:) ~= 0,1) > 0).'; +%sum(rxnSel)%735 +%constructEquations(model, model.rxns(rxnSel)) +%model.grRules(rxnSel) +emptyGrRules = cellfun(@isempty, model.grRules(rxnSel)); +toIgnoreAminoAcidTriplets = rxnSel; +if onlyRxnsWithoutGPRs + toIgnoreAminoAcidTriplets(rxnSel) = emptyGrRules; +end +%constructEquations(model, model.rxns(rxnSel & ~toIgnoreAminoAcidTriplets)) + +%sum(toIgnoreAminoAcidTriplets)%489, to a large extent overlapping with import and exch reactions + +rxns = model.rxns(toIgnoreAminoAcidTriplets); +end diff --git a/code/tINIT/getHumanGEMINITSteps.m b/code/tINIT/getHumanGEMINITSteps.m new file mode 100644 index 00000000..607ba51d --- /dev/null +++ b/code/tINIT/getHumanGEMINITSteps.m @@ -0,0 +1,30 @@ +function steps = getHumanGEMINITSteps(series) +% getHumanGEMINITSteps +% Wrapper for getINITSteps. Currently only passes on the call to RAVEN. +% +% series See getINITSteps in RAVEN (opt, default 'default') +% +% steps Cell array of steps, used as input to ftINIT +% +% Usage: steps = getHumanGEMINITSteps(series) + +if nargin < 1 + steps = getINITSteps(); +else + steps = getINITSteps([], series); +end + +%Recent tests show that we don't really need metsToIgnore, but we leave them in the code +%if anyone wants to experiment with them: +%We ignore these mets in the two first steps, where the import and transport reactions without GPR is there anyway. +%We then force them on in the third step. +%metsToIgnore.simpleMets.mets = {'H2O';'Pi';'PPi';'H+';'O2';'CO2';'Na+'}; +%metsToIgnore.simpleMets.compsToKeep = {'i'};%the H+ in the 'i' compartment may matter + +%steps = getINITSteps([], series); +%steps{1}.MetsToIgnore = metsToIgnore; +%steps{2}.MetsToIgnore = metsToIgnore; +%To only add these to step 1 and 2 can lead to failure when running the third step, +%since one of these metabolites can hinder some fluxes. + +end diff --git a/code/tINIT/getINITModel2.m b/code/tINIT/getINITModel2.m index 8a8fd699..483e5d68 100644 --- a/code/tINIT/getINITModel2.m +++ b/code/tINIT/getINITModel2.m @@ -1,5 +1,8 @@ function [model, metProduction, essentialRxnsForTasks, addedRxnsForTasks, deletedDeadEndRxns, deletedRxnsInINIT, taskReport] = getINITModel2(refModel, tissue, celltype, hpaData, arrayData, metabolomicsData, removeGenes, taskFile, useScoresForTasks, printReport, taskStructure, params, paramsFT) % getINITModel2 +% Note: There is a newer improved version of this function in RAVEN Toolbox +% called ftINIT that can be used together with the helper functions in this repo. +% % Generates a model using the INIT algorithm, based on proteomics and/or % transcriptomics and/or metabolomics and/or metabolic tasks. % This is the newer version, which has updated handling of gene rules to @@ -103,11 +106,11 @@ % settings are possible using this function, and you may want to call the % functions scoreComplexModel, runINIT and fitTasks individually instead. % -% NOTE: Exchange metabolites should normally not be removed from the model +% NOTE: Boundary metabolites should normally not be removed from the model % when using this approach, since checkTasks/fitTasks rely on putting specific -% constraints for each task. The INIT algorithm will remove exchange metabolites -% if any are present. Use importModel(file,false) to import a model with -% exchange metabolites remaining. +% constraints for each task. The INIT algorithm will remove boundary metabolites +% if any are present. Use the addBoundaryMets function to add boundary +% metabolites to a model. % % Usage: [model, metProduction, essentialRxnsForTasks, addedRxnsForTasks,... % deletedDeadEndRxns, deletedRxnsInINIT, taskReport] = ... @@ -147,7 +150,7 @@ %Check that the model is in the closed form if ~isfield(refModel,'unconstrained') - EM = 'Exchange metabolites should normally not be removed from the model when using getINITModel. Use importModel(file,false) to import a model with exchange metabolites remaining (see the documentation for details)'; + EM = 'Boundary metabolites should normally be present in the model when using getINITModel2. Use addBoundaryMets(model) to add boundary metabolites to a model'; dispEM(EM); end @@ -347,9 +350,9 @@ end %The full model has exchange reactions in it. fitTasks calls on fillGaps, -%which automatically removes exchange metabolites (because it assumes that -%the reactions are constrained when appropriate). In this case the -%uptakes/outputs are retrieved from the task sheet instead. To prevent +%which automatically removes exchange (boundary) metabolites (because it +%assumes that the reactions are constrained when appropriate). In this case +%the uptakes/outputs are retrieved from the task sheet instead. To prevent %exchange reactions being used to fill gaps, they are delete from the %reference model here. initModel.id = 'INITModel'; @@ -410,7 +413,7 @@ % Create a model with only the exchange reactions in refModel excModel = removeReactions(refModel,setdiff(refModel.rxns,getExchangeRxns(refModel)),true,true); -% Find the metabolites there which are not exchange metabolites and which do +% Find the metabolites there which are not boundary metabolites and which do % not exist in the output model I = ~ismember(excModel.mets,model.mets) & excModel.unconstrained == 0; diff --git a/code/tINIT/prepHumanModelForftINIT.m b/code/tINIT/prepHumanModelForftINIT.m new file mode 100644 index 00000000..dec5e01f --- /dev/null +++ b/code/tINIT/prepHumanModelForftINIT.m @@ -0,0 +1,126 @@ +function prepDataHumanGEM = prepHumanModelForftINIT(model, convertGenes) +% prepHumanModelForftINIT +% Generates a "standard" prepData structure from Human-GEM to be used in ftINIT. +% This function typically takes a couple of hours to run, so we recommend to only +% run this once and save the results to a .mat file. +% +% convertGenes True if the genes should be converted to symbols +% ('CD8A' etc., and not ENSEMBL) +% +% Usage: prepDataHumanGEM = prepHumanModelForftINIT(convertGenes) +% + + + + +%load tasks +taskStruct = parseTaskList(which('metabolicTasks_Essential.txt')); +%Spontaneous reactions: +rxns_tsv = importTsvFile(which('reactions.tsv')); +spont = rxns_tsv.spontaneous; +spontRxnNames = rxns_tsv.rxns(spont == 1);%very few + +%remove some reactions often not used from the model to speed up calculations + +%drug reactions: +m = removeDrugReactions(model); +%remove all AA triplet rxns, i.e. rxns of the type +%2 H2O[c] + Tryptophanyl-Glycyl-Aspartate[c] <=> aspartate[c] + glycine[c] + tryptophan[c] +%This is only used for import of such compounds, and if you don't have that in your "medium", +%which we usually don't, these are pretty pointless. +AATriplets = getAATripletReactions(m,false); +%length(AATriplets)%735 +m = removeReactions(m, AATriplets); + +%Remove the duplicate complex I reaction with ROS - it only causes problems to include it +m = removeReactions(m, {'MAR13081'}); + + +%prepare some reactions that can always be on: + +%protein reactions creation/degradation + +proteinRxns = { ... + 'MAR05155'; ... + 'MAR05156'; ... + 'MAR05161'; ... + 'MAR05167'; ... + 'MAR05168'; ... + 'MAR05169'; ... + 'MAR05170'; ... + 'MAR05171'; ... + 'MAR05172'; ... + 'MAR05174'; ... + 'MAR05260'; ... + 'MAR05262'; ... + 'MAR05264'; ... + 'MAR05266'; ... + 'MAR05267'; ... + 'MAR05268'; ... + 'MAR05269'; ... + 'MAR05270'; ... + 'MAR05271'; ... + 'MAR05273'; ... + 'MAR05275'; ... + 'MAR05277'; ... + 'MAR05279'; ... + 'MAR05281'; ... + 'MAR05283'; ... + 'MAR05291'; ... + 'MAR09817'; ... + 'MAR09818'}; + +%reactions that just pool metabolites +poolRxns = { ... + 'MAR00011'; ... + 'MAR00012'; ... + 'MAR00477'; ... + 'MAR05233'; ... + 'MAR05234'; ... + 'MAR05238'; ... + 'MAR05239'; ... + 'MAR05243'; ... + 'MAR05244'; ... + 'MAR05247'; ... + 'MAR09022'; ... + 'MAR00015'; ... + 'MAR00016'; ... + 'MAR00017'; ... + 'MAR10033'; ... + 'MAR10035'; ... + 'MAR10036'; ... + 'MAR10037'; ... + 'MAR10038'; ... + 'MAR10062'; ... + 'MAR10063'; ... + 'MAR10064'; ... + 'MAR10065'; ... + 'MAR13082'}; + + +%Radical reactions. +%I have assumed that these are spontaneous, but I don't actually have any proof, so we leave them +%out for now. These could be investigated more - if found spontaneous - set the spontaneous flag instead. +%{ +radicalRxns = { ... + 'MAR06605'; ... + 'MAR06606'; ... + 'MAR06607'; ... + 'MAR06611'; ... + 'MAR06608'; ... + 'MAR02445'; ... + 'MAR04552'; ... + 'MAR04553'; ... + 'MAR06456'; ... + 'MAR06457'; ... + 'MAR06459'; ... + 'MAR03168'; ... + 'MAR04007'; ... + 'MAR12125'}; +%} + +customRxnsToIgnore = unique([proteinRxns;poolRxns]); + +prepDataHumanGEM = prepINITModel(m, taskStruct, spontRxnNames, convertGenes, customRxnsToIgnore, 'e'); + +end diff --git a/code/tINIT/removeDrugReactions.m b/code/tINIT/removeDrugReactions.m new file mode 100644 index 00000000..e509857c --- /dev/null +++ b/code/tINIT/removeDrugReactions.m @@ -0,0 +1,15 @@ +function outModel=removeDrugReactions(inModel) +% outModel=removeDrugReactions(inModel) +% +% Removes reactions from Human-GEM related to drugs +% +% inModel The model, typically Human-GEM or Mouse-GEM +% outModel The resulting model. + +drugNames = {'pravastatin';'Gliclazide';'atorvastatin';'fluvastatin';'fluvastain';'fluvstatin';'simvastatin';'cyclosporine';... + 'acetaminophen';'cerivastatin';'Tacrolimus';'ibuprofen';'lovastatin';'Losartan';'nifedipine';... + 'pitavastatin';'rosuvastatin';'Torasemide';'Midazolam'}; +drugMets = contains(inModel.metNames,drugNames,'IgnoreCase',true); +drugRxns = (sum(inModel.S(drugMets,:) ~= 0,1) > 0).'; +outModel = removeReactions(inModel,inModel.rxns(drugRxns)); +end diff --git a/code/tINIT/removeLowScoreGenes.m b/code/tINIT/removeLowScoreGenes.m deleted file mode 100644 index d7136cfd..00000000 --- a/code/tINIT/removeLowScoreGenes.m +++ /dev/null @@ -1,255 +0,0 @@ -function [newModel,remGenes] = removeLowScoreGenes(model,geneScores,isozymeScoring,complexScoring) -%removeLowScoreGenes Remove low-scoring genes from model. -% -% This function removes genes from a model based on their scores, a step -% used by the tINIT package. The function recognizes and differentiates -% between isozymes and subunits of an enzyme complex. Genes are removed -% from each grRule, subject to the following conditions: -% 1) At least one gene must remain associated with the reaction -% 2) Genes involved in a complex (joined by ANDs) are not removed -% -% Usage: -% -% [newModel,remGenes] = removeLowScoreGenes(model,geneScores,complexScoring); -% -% Inputs: -% -% model Model structure from which genes are to be removed. -% -% geneScores A vector of scores associated with the model genes. -% Genes with a positive score will remain in the model, -% whereas genes with a negative score will try to be -% removed. -% -% If all genes associated with a reaction have a negative -% score, then the least-negative gene will remain; if -% there is a tie, one will be selected at random. -% -% If a negative-scoring gene is a subunit in a complex, -% it will not be removed; however, the entire complex may -% be removed. See the following example cases: -% -% Original: G1 or (G2 and G3 and G4) -% Negative: G1, G2 -% New: G2 and G3 and G4 -% -% Original: G1 or (G2 and G3) or (G4 and G5) -% Negative: G1, G2 -% New: G4 and G5 [using default complexScoring] -% -% Original: (G1 and (G2 or G3) and G4) -% Negative: G2 -% New: (G1 and G3 and G4) -% -% isozymeScoring Method used to combine the scores of multiple isozymes; -% 'min', 'max', 'median', or 'average'. -% (Opt, default 'max') -% -% complexScoring Method used to combine the scores of enzyme complex -% subunits: 'min', 'max', 'median', or 'average'. -% (Opt, default 'min') -% -% Outputs: -% -% newModel Model with updated gene, grRules, and rxnGeneMat fields -% after attemping to remove negative-score genes. -% -% remGenes A list of negative-score genes that were fully removed -% from the model. Negative-score genes that were removed -% from some grRules but not all will not be included in -% this list. -% - - -if nargin < 3 || isempty(isozymeScoring) - isozymeScoring = 'max'; -end -if nargin < 4 - complexScoring = 'min'; -end - -if ~isequal(size(model.genes),size(geneScores)) - error('The dimensions of model genes and geneScores do not match.'); -end - -% convert logical operators to symbols -grRules = model.grRules; -if any(contains(grRules,{'&','|'})) - symbolicRules = true; -else - symbolicRules = false; -end -grRules = regexprep(grRules,' and ',' & '); -grRules = regexprep(grRules,' or ',' | '); - -% get unique list of grRules -[uRules,~,rule_ind] = unique(grRules); - -% iterate through each rule -newRules = uRules; %initialize newRules -for i = 1:numel(uRules) - if isempty(uRules{i}) || ~contains(uRules{i},'|') - continue - elseif contains(uRules{i},'&') - newRules{i} = processComplexRule(uRules{i},model.genes,geneScores,isozymeScoring,complexScoring); - else - newRules{i} = processSimpleRule(uRules{i},model.genes,geneScores,isozymeScoring,complexScoring); - end -end - -% re-map unique rules to model -newModel = model; -newModel.grRules = newRules(rule_ind); - -% restore original logical operator formatting if it was changed -if ~symbolicRules - newModel.grRules = regexprep(newModel.grRules, ' \| ', ' or '); - newModel.grRules = regexprep(newModel.grRules, ' & ', ' and '); -end - -% regenerate "genes" and "rxnGeneMat" model fields -[genes,rxnGeneMat] = getGenesFromGrRules(newModel.grRules); -newModel.genes = genes; -newModel.rxnGeneMat = rxnGeneMat; - -% update other gene-related fields -remInd = ~ismember(model.genes,newModel.genes); -remGenes = model.genes(remInd); - -if isfield(newModel,'geneShortNames') - newModel.geneShortNames(remInd) = []; -end -if isfield(newModel,'geneMiriams') - newModel.geneMiriams(remInd) = []; -end -if isfield(newModel,'geneFrom') - newModel.geneFrom(remInd) = []; -end -if isfield(newModel,'geneComps') - newModel.geneComps(remInd) = []; -end - - -end - - - -function [updatedRule,rScore] = processSimpleRule(rule,genes,gScores,isozymeScoring,complexScoring) -% Either score or modify a reaction gene rule containig only ANDs or ORs. -% -% If the rule contains an enzyme complex (all ANDs), the complex will be -% scored based on the score of its subunits. Subunits without a score (NaN) -% will be excluded from the score calculation. -% -% If the rule contains only isozymes (all ORs), the negative-score genes -% will be removed from the rule. Isozymes without a score (NaN) will not be -% removed from the rule. The resuling rule will then be scored. - - -% get IDs and indices of genes involved in rule -ruleGenes = unique(regexp(rule,'[^&|\(\) ]+','match')); -[~,geneInd] = ismember(ruleGenes,genes); - -% rules with one or no genes remain unchanged -if numel(ruleGenes) < 2 - rScore = gScores(geneInd); - updatedRule = rule; - return -end - -if ~contains(rule,'&') % rule contains isozymes - - scoreMethod = isozymeScoring; - negInd = gScores(geneInd) < 0; % NaNs will return false here - if all(negInd) - % get the least negative gene, adding a small random value to avoid a tie - [~,maxInd] = max(gScores(geneInd) + rand(size(geneInd))*(1e-8)); - updatedRule = ruleGenes{maxInd}; - elseif sum(~negInd) == 1 - updatedRule = ruleGenes{~negInd}; - else - updatedRule = strjoin(ruleGenes(~negInd),' | '); - if startsWith(rule,'(') - updatedRule = ['(',updatedRule,')']; - end - end - - % update ruleGenes and their indices - ruleGenes = unique(regexp(updatedRule,'[^&|\(\) ]+','match')); - [~,geneInd] = ismember(ruleGenes,genes); - -elseif ~contains(rule,'|') % rule contains enzyme complex - scoreMethod = complexScoring; - updatedRule = rule; -else - error('This function cannot handle rules with both "OR" and "AND" expressions.'); -end - -% score rule -switch lower(scoreMethod) - case 'min' - rScore = min(gScores(geneInd),[],'omitnan'); - case 'max' - rScore = max(gScores(geneInd),[],'omitnan'); - case 'median' - rScore = median(gScores(geneInd),'omitnan'); - case 'average' - rScore = mean(gScores(geneInd),'omitnan'); -end - -end - - - -function updatedRule = processComplexRule(rule,genes,gScores,isozymeScoring,complexScoring) -% Update reactions containing both AND and OR expressions. -% -% Negative-score genes will be removed if they are isozymic, whereas they -% will not be removed if they are part of an enzyme complex. However, if -% the enzyme complex has a negative score, the entire complex will be -% removed, as long as it is not the only remaining element in the rule. - - -% Specify phrases to search for in the grRule. These phrases will find -% genes grouped by all ANDs (first phrase) or all ORs (second phrase). -search_phrases = {'\([^&|\(\) ]+( & [^&|\(\) ]+)+\)', '\([^&|\(\) ]+( \| [^&|\(\) ]+)+\)'}; - -% initialize some variables -subsets = {}; % subsets are groups of genes grouped by all ANDs or all ORs -c = 1; % counter to keep track of the group (subset) number -r_orig = rule; % record original rule to determine when it stops changing -for k = 1:100 % iterate some arbitrarily high number of times - for j = 1:length(search_phrases) - new_subset = regexp(rule,search_phrases{j},'match')'; % extract subsets - if ~isempty(new_subset) - subsets = [subsets; new_subset]; % append to list of subsets - subset_nums = arrayfun(@num2str,(c:length(subsets))','UniformOutput',false); % get group numbers to be assigned to the new subsets, and convert to strings - rule = regexprep(rule,search_phrases{j},strcat('#',subset_nums,'#'),'once'); % replace the subsets in the expression with their group numbers (enclosed by "#"s) - c = c + length(new_subset); - end - end - if isequal(rule,r_orig) - break; % stop iterating when rule stops changing - else - r_orig = rule; - end -end -subsets{end+1} = rule; % add final state of rule as the last subset - -% score and update each subset, and append to gene list and gene scores -for i = 1:numel(subsets) - [subsets{i},subset_score] = processSimpleRule(subsets{i},genes,gScores,isozymeScoring,complexScoring); - gScores = [gScores; subset_score]; - genes = [genes; {strcat('#',num2str(i),'#')}]; -end - -% reconstruct the rule from its updated subsets -updatedRule = subsets{end}; -for i = c-1:-1:1 - updatedRule = regexprep(updatedRule,strcat('#',num2str(i),'#'),subsets{i}); -end - -end - - - diff --git a/code/tINIT/scoreComplexModel.m b/code/tINIT/scoreComplexModel.m deleted file mode 100644 index c1856914..00000000 --- a/code/tINIT/scoreComplexModel.m +++ /dev/null @@ -1,372 +0,0 @@ -function [rxnScores, geneScores, hpaScores, arrayScores] = scoreComplexModel(model,hpaData,arrayData,tissue,celltype,noGeneScore,isozymeScoring,complexScoring,multipleCellScoring,hpaLevelScores) -% scoreComplexModel -% Scores the reactions and genes in a model containing complex gene rules -% based on expression data from HPA and/or gene arrays. -% -% It is highly recommended that the model grRules are "cleaned" and -% verified by the "cleanModelGeneRules" function prior to scoring the -% model with scoreComplexModel. -% -% model a model structure -% hpaData HPA data structure from parseHPA (opt if arrayData is -% supplied, default []) -% arrayData gene expression data structure (opt if hpaData is -% supplied, default []) -% genes cell array with the unique gene names -% tissues cell array with the tissue names. The list may not be -% unique, as there can be multiple cell types per tissue -% celltypes cell array with the cell type names for each tissue -% levels GENESxTISSUES array with the expression level for -% each gene in each tissue/celltype. NaN should be -% used when no measurement was performed -% threshold a single value or a vector of gene expression -% thresholds, above which genes are considered to be -% "expressed". (opt, by default, the mean expression -% levels of each gene across all tissues in arrayData -% will be used as the threshold values) -% tissue tissue to score for. Should exist in either -% hpaData.tissues or arrayData.tissues -% celltype cell type to score for. Should exist in either -% hpaData.celltypes or arrayData.celltypes for this -% tissue (opt, default is to use the max values -% among all the cell types for the tissue. Use [] if -% you want to supply more arguments) -% noGeneScore score for reactions without genes (opt, default -2) -% isozymeScoring determines how scores are calculated for reactions -% with multiple genes joined by "OR" expression(s) -% ('min', 'max', 'median', 'average') -% (opt, default 'max') -% complexScoring determines how scores are calculated for reactions -% with multiple genes joined by "AND" expression(s) -% ('min', 'max', 'median', 'average') -% (opt, default 'min') -% multipleCellScoring determines how scores are calculated when several -% cell types are used ('max' or 'average') -% (opt, default 'max') -% hpaLevelScores structure with numerical scores for the expression -% level categories from HPA. The structure should have a -% "names" and a "scores" field (opt, see code for -% default scores) -% -% rxnScores scores for each of the reactions in model -% geneScores scores for each of the genes in model. Genes which are -% not in the dataset(s) have -Inf as scores -% hpaScores scores for each of the genes in model if only taking hpaData -% into account. Genes which are not in the dataset(s) -% have -Inf as scores -% arrayScores scores for each of the genes in model if only taking arrayData -% into account. Genes which are not in the dataset(s) -% have -Inf as scores -% -% Usage: [rxnScores, geneScores, hpaScores, arrayScores]=scoreComplexModel(... -% model,hpaData,arrayData,tissue,celltype,noGeneScore,isozymeScoring, -% complexScoring,multipleCellScoring,hpaLevelScores) -% - - -if nargin < 5 - celltype = []; -end -if nargin < 6 || isempty(noGeneScore) - noGeneScore = -2; -end -if nargin < 7 || isempty(isozymeScoring) - isozymeScoring = 'max'; -end -if nargin < 8 || isempty(complexScoring) - complexScoring = 'min'; -end -if nargin < 9 || isempty(multipleCellScoring) - multipleCellScoring = 'max'; -end -if nargin < 10 - % The first four are for APE, the other ones for staining - hpaLevelScores.names = {'High' 'Medium' 'Low' 'None' 'Strong' 'Moderate' 'Weak' 'Negative' 'Not detected'}; - hpaLevelScores.scores = [20 15 10 -8 20 15 10 -8 -8]; -end - -if isempty(hpaData) && isempty(arrayData) - EM = 'Must supply hpaData, arrayData or both'; - dispEM(EM); -end -if ~ismember(lower(isozymeScoring),{'min','max','median','average'}) - EM = 'Valid options for isozymeScoring are "min", "max", "median", or "average"'; - dispEM(EM); -end -if ~ismember(lower(complexScoring),{'min','max','median','average'}) - EM = 'Valid options for complexScoring are "min", "max", "median", or "average"'; - dispEM(EM); -end -if ~ismember(lower(multipleCellScoring),{'max','average'}) - EM = 'Valid options for multipleCellScoring are "max" or "average"'; - dispEM(EM); -end - - -% Throw an error if array data for only one tissue is supplied without -% specifying threshold values -if ~isempty(arrayData) - if numel(unique(arrayData.tissues)) < 2 - if ~isfield(arrayData,'threshold') || isempty(arrayData.threshold) - EM = 'arrayData must contain measurements for at least two celltypes/tissues since the score is calculated based on the expression level compared to the overall average'; - dispEM(EM); - end - end -end - -% Process arrayData.threshold if necessary -if isfield(arrayData,'threshold') && (numel(arrayData.threshold) == 1) - % if only a single gene threshold value is provided, then just - % duplicate this value for all genes. - arrayData.threshold = arrayData.threshold*ones(size(arrayData.genes)); -end - -% This is so the code can ignore which combination of input data is used -if isempty(arrayData) - arrayData.genes={}; - arrayData.tissues={}; - arrayData.celltypes={}; - arrayData.levels=[]; - arrayData.threshold=[]; -end -if isempty(hpaData) - hpaData.genes={}; - hpaData.tissues={}; - hpaData.celltypes={}; - hpaData.levels={}; - hpaData.types={}; - hpaData.reliabilities={}; - hpaData.gene2Level=[]; - hpaData.gene2Type=[]; - hpaData.gene2Reliability=[]; -end - -% Check that the tissue exists -if ~ismember(upper(tissue),upper(hpaData.tissues)) && ~ismember(upper(tissue),upper(arrayData.tissues)) - EM = 'The tissue name does not match'; - dispEM(EM); -end -if any(celltype) - % Check that both data types has cell type defined if that is to be used - if ~isfield(hpaData,'celltypes') || ~isfield(arrayData,'celltypes') - EM = 'Both hpaData and arrayData must contain cell type information if cell type is to be used'; - dispEM(EM); - end - if ~ismember(upper(celltype),upper(hpaData.celltypes)) && ~ismember(upper(celltype),upper(arrayData.celltypes)) - EM = 'The cell type name does not match'; - dispEM(EM); - end -end - -% Some preprocessing of the structures to increase efficiency -% Remove all tissues that are not the correct one -J = ~strcmpi(hpaData.tissues,tissue); - -%If cell type is supplied, then only keep that cell type -if any(celltype) - J = J | ~strcmpi(hpaData.celltypes,celltype); -end - -hpaData.tissues(J)=[]; -if isfield(hpaData,'celltypes') - hpaData.celltypes(J)=[]; -end -if isfield(hpaData,'gene2Level') - hpaData.gene2Level(:,J)=[]; -end -if isfield(hpaData,'gene2Type') - hpaData.gene2Type(:,J)=[]; -end -if isfield(hpaData,'gene2Reliability') - hpaData.gene2Reliability(:,J)=[]; -end - -% Remove all genes from the structures that are not in model or that aren't -% measured in the tissue -if ~isempty(hpaData.genes) % This should not be necessary, but the summation is a 0x1 matrix and the other is [] - I = ~ismember(hpaData.genes,model.genes) | sum(hpaData.gene2Level,2) == 0; -else - I = []; -end -hpaData.genes(I) = []; -if isfield(hpaData,'gene2Level') - hpaData.gene2Level(I,:) = []; -end -if isfield(hpaData,'gene2Type') - hpaData.gene2Type(I,:) = []; -end -if isfield(hpaData,'gene2Reliability') - hpaData.gene2Reliability(I,:) = []; -end - -I = strcmpi(arrayData.tissues,tissue); -% If cell type is supplied, then only keep that cell type -if any(celltype) - I = I & strcmpi(arrayData.celltypes,celltype); -end - -% Remove all genes from the structures that are not in model or that aren't -% measured in the tissue -J = ~ismember(arrayData.genes,model.genes) | all(isnan(arrayData.levels(:,I)),2); -arrayData.genes(J) = []; -arrayData.levels(J,:) = []; -if isfield(arrayData,'threshold') - arrayData.threshold(J) = []; -end - -% Calculate the scores for the arrayData. These scores are calculated for -% each genes from its fold change between the tissue/celltype(s) in question -% and all other celltypes, or the threshold if supplied. This is a lower -% quality data than protein abundance, since gene abundance is an indirect -% estimate of protiein level. These scores are therefore only used for genes -% for which there is no HPA data available. The fold changes are transformed -% as min(5*log(x),10) for x > 1 and max(5*log(x),-5) for x < 1 in order to -% have negative scores for lower expressed genes and to scale the scrores -% to have somewhat lower weights than the HPA scores -tempArrayLevels = arrayData.levels; -tempArrayLevels(isnan(tempArrayLevels)) = 0; -if isfield(arrayData,'threshold') && ~isempty(arrayData.threshold) - % if provided, the user-supplied expression threshold value(s) will be - % used as the "average" expression level to which each gene is compared - average = arrayData.threshold; -else - average = sum(tempArrayLevels,2)./sum(~isnan(arrayData.levels),2); -end -if strcmpi(multipleCellScoring,'max') - current = max(tempArrayLevels(:,I),[],2); -else - current = sum(tempArrayLevels(:,I),2)./sum(~isnan(arrayData.levels(:,I)),2); -end -if ~isempty(current) - aScores = 5*log(current./average); -else - aScores = []; -end -aScores(aScores > 0) = min(aScores(aScores > 0),10); -aScores(aScores < 0) = max(aScores(aScores < 0),-5); -aScores(isnan(aScores)) = -5; % NaNs occur when gene expression is zero across all tissues - -% Map the HPA levels to scores -[I, J] = ismember(upper(hpaData.levels),upper(hpaLevelScores.names)); -if ~all(I) - EM = 'There are expression level categories that do not match to hpaLevelScores'; - dispEM(EM); -end -[K, L, M] = find(hpaData.gene2Level); -scores = hpaLevelScores.scores(J); -if strcmpi(multipleCellScoring,'max') - hScores = max(sparse(K,L,scores(M),numel(hpaData.genes),numel(hpaData.tissues)),[],2); -else - hScores = mean(sparse(K,L,scores(M),numel(hpaData.genes),numel(hpaData.tissues)),2); -end - -% Assign gene scores, prioritizing HPA (protein) data over arrayData (RNA) -geneScores = nan(numel(model.genes),1); -hpaScores = -Inf(numel(model.genes),1); -arrayScores = -Inf(numel(model.genes),1); - -[I, J] = ismember(model.genes,arrayData.genes); -geneScores(I) = aScores(J(I)); -arrayScores(I) = aScores(J(I)); - -[I, J] = ismember(model.genes,hpaData.genes); -geneScores(I) = hScores(J(I)); -hpaScores(I) = hScores(J(I)); - - -% To speed things up, only need to score each unique grRule once -[uRules,~,rule_ind] = unique(model.grRules); -uScores = nan(size(uRules)); - -% convert logic operators to symbols -uRules = regexprep(uRules,' and ',' & '); -uRules = regexprep(uRules,' or ',' | '); - -% score based on presence/combination of & and | operators -for i = 1:numel(uRules) - if isempty(uRules{i}) - uScores(i) = noGeneScore; - elseif contains(uRules{i},'&') && contains(uRules{i},'|') - uScores(i) = scoreComplexRule(uRules{i},model.genes,geneScores,isozymeScoring,complexScoring); - else - uScores(i) = scoreSimpleRule(uRules{i},model.genes,geneScores,isozymeScoring,complexScoring); - end -end - -% NaN reaction scores should be changed to the no-gene score -uScores(isnan(uScores)) = noGeneScore; - -% re-map unique rule scores to model -rxnScores = uScores(rule_ind); - -end - - - -function rScore = scoreSimpleRule(rule,genes,gScores,isozymeScoring,complexScoring) -%Score reactions with simple gene rules (those with all ANDs or all ORs). - -if ~contains(rule,'&') - scoreMethod = isozymeScoring; -elseif ~contains(rule,'|') - scoreMethod = complexScoring; -else - error('This function cannot handle complex gene rules.'); -end -ruleGenes = unique(regexp(rule,'[^&|\(\) ]+','match')); -[~,geneInd] = ismember(ruleGenes,genes); -switch lower(scoreMethod) - case 'min' - rScore = min(gScores(geneInd),[],'omitnan'); - case 'max' - rScore = max(gScores(geneInd),[],'omitnan'); - case 'median' - rScore = median(gScores(geneInd),'omitnan'); - case 'average' - rScore = mean(gScores(geneInd),'omitnan'); -end - -end - - - -function rScore = scoreComplexRule(rule,genes,gScores,isozymeScoring,complexScoring) -%Score reactions with complex gene rules (those with both ANDs or ORs). - -% Specify phrases to search for in the grRule. These phrases will find -% genes grouped by all ANDs (first phrase) or all ORs (second phrase). -search_phrases = {'\([^&|\(\) ]+( & [^&|\(\) ]+)+\)', '\([^&|\(\) ]+( \| [^&|\(\) ]+)+\)'}; - -% initialize some variables -subsets = {}; % subsets are groups of genes grouped by all ANDs or all ORs -c = 1; % counter to keep track of the group (subset) number -r_orig = rule; % record original rule to determine when it stops changing -for k = 1:100 % iterate some arbitrarily high number of times - for j = 1:length(search_phrases) - new_subset = regexp(rule,search_phrases{j},'match')'; % extract subsets - if ~isempty(new_subset) - subsets = [subsets; new_subset]; % append to list of subsets - subset_nums = arrayfun(@num2str,(c:length(subsets))','UniformOutput',false); % get group numbers to be assigned to the new subsets, and convert to strings - rule = regexprep(rule,search_phrases{j},strcat('#',subset_nums,'#'),'once'); % replace the subsets in the expression with their group numbers (enclosed by "#"s) - c = c + length(new_subset); - end - end - if isequal(rule,r_orig) - break; % stop iterating when rule stops changing - else - r_orig = rule; - end -end -subsets{end+1} = rule; % add final state of rule as the last subset - -% score each subset and append to gene list and gene scores -for i = 1:numel(subsets) - gScores = [gScores; scoreSimpleRule(subsets{i},genes,gScores,isozymeScoring,complexScoring)]; - genes = [genes; {strcat('#',num2str(i),'#')}]; -end - -% the final subset score is the overall reaction score -rScore = gScores(end); - -end - diff --git a/data/deprecatedIdentifiers/deprecatedReactions.tsv b/data/deprecatedIdentifiers/deprecatedReactions.tsv index c1d06dd7..1be9f8e9 100644 --- a/data/deprecatedIdentifiers/deprecatedReactions.tsv +++ b/data/deprecatedIdentifiers/deprecatedReactions.tsv @@ -12,4 +12,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR07262" "" "DOLICHOL_Lter" "" "" "" "" "MNXR97703" "HMR_7262" "RCR20987" "" 0 "" "" "HMR_7262" "MAR11269" "" "" "" "" "" "ELAIDCRNtr" "" "" "" "" 0 "" "" "ELAIDCRNtr" "MAR11275" "" "" "" "" "" "PCRNtr" "" "" "" "" 0 "" "" "PCRNtr" -"MAR11273" "" "" "" "" "" "LNLCCRNtr" "" "" "" "" 0 "" "" "LNLCCRNtr" \ No newline at end of file +"MAR11273" "" "" "" "" "" "LNLCCRNtr" "" "" "" "" 0 "" "" "LNLCCRNtr" +"MAR08639" "" "" "" "" "" "HMR_8639" "" "HMR_8639" "RCR21087" "" 0 "" "" "HMR_8639" +"MAR08973" "" "GNDc" "" "" "" "GNDc" "" "" "" "" 0 "" "" "GNDc" diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml index f5fa2e77..ba8d7b4d 100644 --- a/model/Human-GEM.yml +++ b/model/Human-GEM.yml @@ -4,7 +4,7 @@ short_name: "Human-GEM" full_name: "Generic genome-scale metabolic model of Homo sapiens" version: "" - date: "2021-12-18" + date: "2022-06-14" authors: "Jonathan Robinson, Hao Wang, Pierre-Etienne Cholley, Pinar Kocabas" email: "jonrob@chalmers.se" organization: "Chalmers University of Technology" @@ -21900,6 +21900,14 @@ - charge: -2 - inchis: "" - metFrom: "HMRdatabase" + - !!omap + - id: "MAM01639n" + - name: "dAMP" + - compartment: "n" + - formula: "C10H12N5O6P" + - charge: -2 + - inchis: "" + - metFrom: "" - !!omap - id: "MAM01640c" - name: "D-arginine" @@ -22716,6 +22724,14 @@ - charge: -2 - inchis: "" - metFrom: "HMRdatabase" + - !!omap + - id: "MAM01686n" + - name: "dGMP" + - compartment: "n" + - formula: "C10H12N5O7P" + - charge: -2 + - inchis: "" + - metFrom: "" - !!omap - id: "MAM01687r" - name: "dgpi_prot heparan sulfate" @@ -39516,6 +39532,14 @@ - charge: -4 - inchis: "" - metFrom: "HMRdatabase" + - !!omap + - id: "MAM02847n" + - name: "RNA" + - compartment: "n" + - formula: "C15H22O19P3R3" + - charge: -4 + - inchis: "" + - metFrom: "" - !!omap - id: "MAM02848c" - name: "RNA-3-terminal-phosphate" @@ -66943,7 +66967,7 @@ - reactions: - !!omap - id: "MAR03905" - - name: "" + - name: "ethanol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01249c: 1 - MAM01796c: -1 @@ -66962,7 +66986,7 @@ - confidence_score: 0 - !!omap - id: "MAR03907" - - name: "" + - name: "Ethanol:NADP+ oxidoreductase" - metabolites: !!omap - MAM01249c: 1 - MAM01796c: -1 @@ -66981,7 +67005,7 @@ - confidence_score: 0 - !!omap - id: "MAR04097" - - name: "" + - name: "Acetate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01252c: -1 - MAM01261c: 1 @@ -67001,7 +67025,7 @@ - confidence_score: 0 - !!omap - id: "MAR04099" - - name: "" + - name: "Acetate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01252m: -1 - MAM01261m: 1 @@ -67021,7 +67045,7 @@ - confidence_score: 0 - !!omap - id: "MAR04108" - - name: "" + - name: "acetyl adenylate:CoA acetyltransferase" - metabolites: !!omap - MAM01257c: -1 - MAM01261c: 1 @@ -67040,7 +67064,7 @@ - confidence_score: 0 - !!omap - id: "MAR04133" - - name: "" + - name: "ATP:acetate adenylyltransferase" - metabolites: !!omap - MAM01252c: -1 - MAM01257c: 1 @@ -67059,7 +67083,7 @@ - confidence_score: 0 - !!omap - id: "MAR04137" - - name: "" + - name: "pyruvate:NAD+ 2-oxidoreductase (CoA-acetylating)" - metabolites: !!omap - MAM01261m: 1 - MAM01596m: 1 @@ -67079,7 +67103,7 @@ - confidence_score: 0 - !!omap - id: "MAR04281" - - name: "" + - name: "(S)-Lactate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039x: -1 - MAM02403x: 1 @@ -67098,7 +67122,7 @@ - confidence_score: 0 - !!omap - id: "MAR04388" - - name: "" + - name: "(S)-Lactate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02403c: 1 @@ -67117,7 +67141,7 @@ - confidence_score: 0 - !!omap - id: "MAR04283" - - name: "" + - name: "Acetaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM01249c: -1 - MAM01252c: 1 @@ -67137,7 +67161,7 @@ - confidence_score: 0 - !!omap - id: "MAR08357" - - name: "" + - name: "Acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01249m: -1 - MAM01252m: 1 @@ -67157,7 +67181,7 @@ - confidence_score: 0 - !!omap - id: "MAR04379" - - name: "" + - name: "ATP:D-fructose-6-phosphate 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -67176,7 +67200,7 @@ - confidence_score: 0 - !!omap - id: "MAR04301" - - name: "" + - name: "UTP:D-fructose-6-phosphate 1-phosphotransferase" - metabolites: !!omap - MAM01841c: 1 - MAM01845c: -1 @@ -67195,7 +67219,7 @@ - confidence_score: 0 - !!omap - id: "MAR04355" - - name: "" + - name: "sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase" - metabolites: !!omap - MAM01690c: -1 - MAM01785c: -1 @@ -67212,7 +67236,7 @@ - confidence_score: 0 - !!omap - id: "MAR04358" - - name: "" + - name: "ATP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -67231,7 +67255,7 @@ - confidence_score: 0 - !!omap - id: "MAR04360" - - name: "" + - name: "2-Oxopropanal:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -67251,7 +67275,7 @@ - confidence_score: 0 - !!omap - id: "MAR04363" - - name: "" + - name: "2-phospho-D-glycerate hydro-lyase (phosphoenolpyruvate-forming)" - metabolites: !!omap - MAM00674c: -1 - MAM02040c: 1 @@ -67268,7 +67292,7 @@ - confidence_score: 0 - !!omap - id: "MAR04365" - - name: "" + - name: "D-phosphoglycerate 2,3-phosphomutase" - metabolites: !!omap - MAM00674c: -1 - MAM00913c: 1 @@ -67284,7 +67308,7 @@ - confidence_score: 0 - !!omap - id: "MAR04368" - - name: "" + - name: "ATP:3-phospho-D-glycerate 1-phosphotransferase" - metabolites: !!omap - MAM00247c: -1 - MAM00913c: 1 @@ -67302,7 +67326,7 @@ - confidence_score: 0 - !!omap - id: "MAR04370" - - name: "" + - name: "3-Phospho-D-glyceroyl phosphate phosphohydrolase" - metabolites: !!omap - MAM00247c: -1 - MAM00913c: 1 @@ -67321,7 +67345,7 @@ - confidence_score: 0 - !!omap - id: "MAR04371" - - name: "" + - name: "3-phospho-D-glycerate 1,2-phosphomutase" - metabolites: !!omap - MAM00247c: -1 - MAM00569c: 1 @@ -67338,7 +67362,7 @@ - confidence_score: 0 - !!omap - id: "MAR04372" - - name: "" + - name: "2,3-bisphospho-D-glycerate 2-phosphohydrolase" - metabolites: !!omap - MAM00569c: -1 - MAM00913c: 1 @@ -67356,7 +67380,7 @@ - confidence_score: 0 - !!omap - id: "MAR04373" - - name: "" + - name: "D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)" - metabolites: !!omap - MAM00247c: -1 - MAM01939c: 1 @@ -67376,7 +67400,7 @@ - confidence_score: 0 - !!omap - id: "MAR04375" - - name: "" + - name: "D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)" - metabolites: !!omap - MAM01690c: -1 - MAM01841c: 1 @@ -67393,7 +67417,7 @@ - confidence_score: 0 - !!omap - id: "MAR04377" - - name: "" + - name: "D-Fructose-1,6-bisphosphate 1-phosphohydrolase" - metabolites: !!omap - MAM01841c: -1 - MAM01845c: 1 @@ -67411,7 +67435,7 @@ - confidence_score: 0 - !!omap - id: "MAR04381" - - name: "" + - name: "D-glucose-6-phosphate aldose-ketose-isomerase" - metabolites: !!omap - MAM01845c: -1 - MAM01968c: 1 @@ -67427,7 +67451,7 @@ - confidence_score: 0 - !!omap - id: "MAR04391" - - name: "" + - name: "D-glyceraldehyde-3-phosphate aldose-ketose-isomerase" - metabolites: !!omap - MAM01690c: -1 - MAM01939c: 1 @@ -67443,7 +67467,7 @@ - confidence_score: 0 - !!omap - id: "MAR04394" - - name: "" + - name: "ATP:D-glucose 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -67462,7 +67486,7 @@ - confidence_score: 0 - !!omap - id: "MAR04396" - - name: "" + - name: "alpha-D-glucose 1,6-phosphomutase" - metabolites: !!omap - MAM01967c: -1 - MAM01968c: 1 @@ -67478,7 +67502,7 @@ - confidence_score: 0 - !!omap - id: "MAR04521" - - name: "" + - name: "D-Glucose-6-phosphate phosphohydrolase" - metabolites: !!omap - MAM01965r: 1 - MAM01968r: -1 @@ -67496,7 +67520,7 @@ - confidence_score: 0 - !!omap - id: "MAR06410" - - name: "" + - name: "pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating)" - metabolites: !!omap - MAM01596m: 1 - MAM02039m: -1 @@ -67515,7 +67539,7 @@ - confidence_score: 0 - !!omap - id: "MAR06412" - - name: "" + - name: "acetyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-acetyltransferase" - metabolites: !!omap - MAM01261m: 1 - MAM01597m: -1 @@ -67533,7 +67557,7 @@ - confidence_score: 0 - !!omap - id: "MAR07745" - - name: "" + - name: "D-glucose 1-epimerase" - metabolites: !!omap - MAM01388c: -1 - MAM01965c: 1 @@ -67549,7 +67573,7 @@ - confidence_score: 0 - !!omap - id: "MAR07747" - - name: "" + - name: "ADP:D-glucose 6-phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01334c: 1 @@ -67626,7 +67650,7 @@ - confidence_score: 0 - !!omap - id: "MAR03989" - - name: "" + - name: "maltose glucohydrolase" - metabolites: !!omap - MAM01965e: 2 - MAM02040e: -1 @@ -67643,7 +67667,7 @@ - confidence_score: 0 - !!omap - id: "MAR04122" - - name: "" + - name: "UDP-glucose:NAD+ 6-oxidoreductase" - metabolites: !!omap - MAM02039c: 3 - MAM02040c: -1 @@ -67663,7 +67687,7 @@ - confidence_score: 0 - !!omap - id: "MAR04837" - - name: "" + - name: "alpha,alpha-trehalose glucohydrolase" - metabolites: !!omap - MAM01965e: 2 - MAM02040e: -1 @@ -67680,7 +67704,7 @@ - confidence_score: 0 - !!omap - id: "MAR05395" - - name: "" + - name: "UDP-alpha-D-glucose:glycogenin alpha-D-glucosyltransferase" - metabolites: !!omap - MAM01995c: 1 - MAM01996c: -1 @@ -68127,7 +68151,7 @@ - confidence_score: 0 - !!omap - id: "MAR08587" - - name: "" + - name: "maltose glucohydrolase" - metabolites: !!omap - MAM01965c: 2 - MAM02040c: -1 @@ -68144,7 +68168,7 @@ - confidence_score: 0 - !!omap - id: "MAR08589" - - name: "" + - name: "maltose glucohydrolase" - metabolites: !!omap - MAM01965l: 2 - MAM02040l: -1 @@ -68161,7 +68185,7 @@ - confidence_score: 0 - !!omap - id: "MAR08583" - - name: "" + - name: "1,4-alpha-D-Glucan glucohydrolase" - metabolites: !!omap - MAM01965e: 8 - MAM02040e: -8 @@ -68197,7 +68221,7 @@ - confidence_score: 0 - !!omap - id: "MAR08585" - - name: "" + - name: "3-phospho-D-glyceroyl-phosphate:alpha-D-glucose-1-phosphate 6-phosphotransferase" - metabolites: !!omap - MAM00247c: -1 - MAM00913c: 1 @@ -68215,7 +68239,7 @@ - confidence_score: 0 - !!omap - id: "MAR03944" - - name: "" + - name: "UTP:alpha-D-glucose-1-phosphate uridylyltransferase" - metabolites: !!omap - MAM01967c: -1 - MAM02039c: -1 @@ -68234,7 +68258,7 @@ - confidence_score: 0 - !!omap - id: "MAR04128" - - name: "" + - name: "UDP-glucose 4-epimerase" - metabolites: !!omap - MAM03107c: -1 - MAM03108c: 1 @@ -68269,7 +68293,7 @@ - confidence_score: 0 - !!omap - id: "MAR04131" - - name: "" + - name: "UDP-glucose:alpha-D-galactose-1-phosphate uridylyltransferase" - metabolites: !!omap - MAM01322c: 1 - MAM01967c: -1 @@ -68287,7 +68311,7 @@ - confidence_score: 0 - !!omap - id: "MAR04132" - - name: "" + - name: "UDP-glucose:alpha-D-galactose-1-phosphate uridylyltransferase" - metabolites: !!omap - MAM01911c: -1 - MAM01967c: 1 @@ -68305,7 +68329,7 @@ - confidence_score: 0 - !!omap - id: "MAR04303" - - name: "" + - name: "sucrose glucohydrolase" - metabolites: !!omap - MAM01840e: 1 - MAM01965e: 1 @@ -68323,7 +68347,7 @@ - confidence_score: 0 - !!omap - id: "MAR04414" - - name: "" + - name: "ATP:alpha-D-galactose 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68342,7 +68366,7 @@ - confidence_score: 0 - !!omap - id: "MAR04415" - - name: "" + - name: "Lactose galactohydrolase" - metabolites: !!omap - MAM01910e: 1 - MAM01965e: 1 @@ -68360,7 +68384,7 @@ - confidence_score: 0 - !!omap - id: "MAR04416" - - name: "" + - name: "Galactosylglycerol galactohydrolase" - metabolites: !!omap - MAM01910e: 1 - MAM01913e: -1 @@ -68378,7 +68402,7 @@ - confidence_score: 0 - !!omap - id: "MAR04774" - - name: "" + - name: "CTP:D-tagatose 6-phosphate 1-phosphotransferase" - metabolites: !!omap - MAM01424c: -1 - MAM01623c: 1 @@ -68397,7 +68421,7 @@ - confidence_score: 0 - !!omap - id: "MAR04775" - - name: "" + - name: "ITP:D-tagatose 6-phosphate 1-phosphotransferase" - metabolites: !!omap - MAM01746c: -1 - MAM02039c: 1 @@ -68416,7 +68440,7 @@ - confidence_score: 0 - !!omap - id: "MAR04831" - - name: "" + - name: "Lactose:(acceptor) 3-oxidoreductase" - metabolites: !!omap - MAM00812e: 1 - MAM02039e: 1 @@ -68435,7 +68459,7 @@ - confidence_score: 0 - !!omap - id: "MAR04832" - - name: "" + - name: "3-Ketolactose galactohydrolase" - metabolites: !!omap - MAM00810e: -1 - MAM00812e: 1 @@ -68453,7 +68477,7 @@ - confidence_score: 0 - !!omap - id: "MAR07674" - - name: "" + - name: "UDP-alpha-D-galactose:D-glucose 4-beta-D-galactosyltransferase" - metabolites: !!omap - MAM01965g: -1 - MAM02039g: 1 @@ -68472,7 +68496,7 @@ - confidence_score: 0 - !!omap - id: "MAR08761" - - name: "" + - name: "ATP:D-tagatose 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68526,7 +68550,7 @@ - confidence_score: 0 - !!omap - id: "MAR08766" - - name: "" + - name: "galactitol:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM01909c: 1 - MAM01910c: -1 @@ -68545,7 +68569,7 @@ - confidence_score: 0 - !!omap - id: "MAR08767" - - name: "" + - name: "UTP:alpha-D-galactose-1-phosphate uridylyltransferase" - metabolites: !!omap - MAM01322c: -1 - MAM02039c: -1 @@ -68564,7 +68588,7 @@ - confidence_score: 0 - !!omap - id: "MAR00454" - - name: "" + - name: "ATP:D-glyceraldehyde 3-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68602,7 +68626,7 @@ - confidence_score: 0 - !!omap - id: "MAR04310" - - name: "" + - name: "ATP:D-fructose 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68621,7 +68645,7 @@ - confidence_score: 0 - !!omap - id: "MAR04315" - - name: "" + - name: "D-Glucitol:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01682c: -1 - MAM01840c: 1 @@ -68640,7 +68664,7 @@ - confidence_score: 0 - !!omap - id: "MAR04316" - - name: "" + - name: "D-Glucitol:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM01682c: -1 - MAM01965c: 1 @@ -68697,7 +68721,7 @@ - confidence_score: 0 - !!omap - id: "MAR04319" - - name: "" + - name: "ATP:D-fructose 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68735,7 +68759,7 @@ - confidence_score: 0 - !!omap - id: "MAR04356" - - name: "" + - name: "D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase" - metabolites: !!omap - MAM01690c: -1 - MAM01842c: 1 @@ -68752,7 +68776,7 @@ - confidence_score: 0 - !!omap - id: "MAR04383" - - name: "" + - name: "D-mannose-6-phosphate aldose-ketose-isomerase" - metabolites: !!omap - MAM01845c: -1 - MAM02455c: 1 @@ -68768,7 +68792,7 @@ - confidence_score: 0 - !!omap - id: "MAR04385" - - name: "" + - name: "D-mannose 6-phosphate 1,6-phosphomutase" - metabolites: !!omap - MAM02454c: 1 - MAM02455c: -1 @@ -68784,7 +68808,7 @@ - confidence_score: 0 - !!omap - id: "MAR04386" - - name: "" + - name: "GDP:D-mannose-1-phosphate guanylyltransferase" - metabolites: !!omap - MAM01948c: -1 - MAM01951c: 1 @@ -68803,7 +68827,7 @@ - confidence_score: 0 - !!omap - id: "MAR04387" - - name: "" + - name: "GTP:alpha-D-mannose-1-phosphate guanylyltransferase" - metabolites: !!omap - MAM01951c: 1 - MAM02034c: -1 @@ -68822,7 +68846,7 @@ - confidence_score: 0 - !!omap - id: "MAR04399" - - name: "" + - name: "GDP-alpha-D-mannose 4,6-hydro-lyase (GDP-4-dehydro-alpha-D-rhamnose-forming)" - metabolites: !!omap - MAM01949c: 1 - MAM01951c: -1 @@ -68839,7 +68863,7 @@ - confidence_score: 0 - !!omap - id: "MAR04400" - - name: "" + - name: "GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)" - metabolites: !!omap - MAM01949c: -1 - MAM01950c: 1 @@ -68858,7 +68882,7 @@ - confidence_score: 0 - !!omap - id: "MAR04401" - - name: "" + - name: "GTP:beta-L-fucose-1-phosphate guanylyltransferase" - metabolites: !!omap - MAM01950c: -1 - MAM02034c: 1 @@ -68877,7 +68901,7 @@ - confidence_score: 0 - !!omap - id: "MAR04402" - - name: "" + - name: "ATP:6-deoxy-L-galactose 1-phosphotransferase" - metabolites: !!omap - MAM01159c: -1 - MAM01285c: 1 @@ -68896,7 +68920,7 @@ - confidence_score: 0 - !!omap - id: "MAR04403" - - name: "" + - name: "L-fucose aldose-ketose-isomerase" - metabolites: !!omap - MAM01159c: -1 - MAM02373c: 1 @@ -68912,7 +68936,7 @@ - confidence_score: 0 - !!omap - id: "MAR04490" - - name: "" + - name: "ATP:D-mannose 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -68931,7 +68955,7 @@ - confidence_score: 0 - !!omap - id: "MAR04706" - - name: "" + - name: "beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase" - metabolites: !!omap - MAM01843c: -1 - MAM01845c: 1 @@ -68949,7 +68973,7 @@ - confidence_score: 0 - !!omap - id: "MAR08768" - - name: "" + - name: "GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)" - metabolites: !!omap - MAM01949c: -1 - MAM01950c: 1 @@ -68968,7 +68992,7 @@ - confidence_score: 0 - !!omap - id: "MAR04590" - - name: "" + - name: "Xylitol:NADP+ 4-oxidoreductase (L-xylulose-forming)" - metabolites: !!omap - MAM02039c: -1 - MAM02425c: -1 @@ -68987,7 +69011,7 @@ - confidence_score: 0 - !!omap - id: "MAR04591" - - name: "" + - name: "xylitol:NAD oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02425c: 1 @@ -69006,7 +69030,7 @@ - confidence_score: 0 - !!omap - id: "MAR04592" - - name: "" + - name: "xylitol:NADP+ oxidoreductase" - metabolites: !!omap - MAM01758c: -1 - MAM02039c: -1 @@ -69025,7 +69049,7 @@ - confidence_score: 0 - !!omap - id: "MAR04593" - - name: "" + - name: "xylitol:NAD+ 2-oxidoreductase (D-xylulose-forming)" - metabolites: !!omap - MAM01759c: 1 - MAM02039c: 1 @@ -69044,7 +69068,7 @@ - confidence_score: 0 - !!omap - id: "MAR04594" - - name: "" + - name: "D-xylose:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM01757c: 1 - MAM01758c: -1 @@ -69063,7 +69087,7 @@ - confidence_score: 0 - !!omap - id: "MAR04595" - - name: "" + - name: "ATP:D-xylulose 5-phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -69082,7 +69106,7 @@ - confidence_score: 0 - !!omap - id: "MAR08341" - - name: "" + - name: "L-Arabitol:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02337c: -1 @@ -69101,7 +69125,7 @@ - confidence_score: 0 - !!omap - id: "MAR08342" - - name: "" + - name: "L-arabinitol:NAD+ 4-oxidoreductase (L-xylulose-forming)" - metabolites: !!omap - MAM02039c: -1 - MAM02338c: 1 @@ -69120,7 +69144,7 @@ - confidence_score: 0 - !!omap - id: "MAR08344" - - name: "" + - name: "L-gulonate:NADP+ 6-oxidoreductase" - metabolites: !!omap - MAM01973r: -1 - MAM02039r: -1 @@ -69139,7 +69163,7 @@ - confidence_score: 0 - !!omap - id: "MAR08352" - - name: "" + - name: "L-Gulonate:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM00768c: -1 - MAM02039c: -1 @@ -69158,7 +69182,7 @@ - confidence_score: 0 - !!omap - id: "MAR08353" - - name: "" + - name: "3-Dehydro-L-gulonate carboxy-lyase" - metabolites: !!omap - MAM00768c: -1 - MAM01596c: 1 @@ -69176,7 +69200,7 @@ - confidence_score: 0 - !!omap - id: "MAR08726" - - name: "" + - name: "ATP:D-ribulose 5-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -69232,7 +69256,7 @@ - confidence_score: 0 - !!omap - id: "MAR08729" - - name: "" + - name: "UDP-glucuronate glucuronohydrolase" - metabolites: !!omap - MAM01973c: 1 - MAM02039c: 1 @@ -69251,7 +69275,7 @@ - confidence_score: 0 - !!omap - id: "MAR06537" - - name: "" + - name: "L-gulonate:NADP+ 6-oxidoreductase" - metabolites: !!omap - MAM01973c: -1 - MAM02039c: -1 @@ -69270,7 +69294,7 @@ - confidence_score: 0 - !!omap - id: "MAR01568" - - name: "" + - name: "Acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01249c: -1 - MAM01252c: 1 @@ -69290,7 +69314,7 @@ - confidence_score: 0 - !!omap - id: "MAR03853" - - name: "" + - name: "(R)-S-Lactoylglutathione methylglyoxal-lyase (isomerizing)" - metabolites: !!omap - MAM00168c: 1 - MAM02026c: -1 @@ -69307,7 +69331,7 @@ - confidence_score: 0 - !!omap - id: "MAR03854" - - name: "" + - name: "Lactaldehyde:NAD+ 1-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02329c: 1 @@ -69326,7 +69350,7 @@ - confidence_score: 0 - !!omap - id: "MAR03855" - - name: "" + - name: "Propane-1,2-diol:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02329c: -1 @@ -69345,7 +69369,7 @@ - confidence_score: 0 - !!omap - id: "MAR03857" - - name: "" + - name: "(R)-S-Lactoylglutathione hydrolase" - metabolites: !!omap - MAM00168c: -1 - MAM01716c: 1 @@ -69364,7 +69388,7 @@ - confidence_score: 0 - !!omap - id: "MAR03859" - - name: "" + - name: "(R)-Lactate:ferricytochrome-c 2-oxidoreductase" - metabolites: !!omap - MAM01716c: -1 - MAM01824m: -2 @@ -69383,7 +69407,7 @@ - confidence_score: 0 - !!omap - id: "MAR04087" - - name: "" + - name: "(S)-malate:NAD+ oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01596m: 1 - MAM02439m: -1 @@ -69402,7 +69426,7 @@ - confidence_score: 0 - !!omap - id: "MAR04089" - - name: "" + - name: "(S)-Malate:NADP+ oxidoreductase(oxaloacetate-decarboxylating)" - metabolites: !!omap - MAM01596c: 1 - MAM02439c: -1 @@ -69421,7 +69445,7 @@ - confidence_score: 0 - !!omap - id: "MAR04091" - - name: "" + - name: "(S)-Malate:NADP+ oxidoreductase(oxaloacetate-decarboxylating)" - metabolites: !!omap - MAM01596m: 1 - MAM02439m: -1 @@ -69440,7 +69464,7 @@ - confidence_score: 0 - !!omap - id: "MAR04093" - - name: "" + - name: "Acetyl-CoA hydrolase" - metabolites: !!omap - MAM01252c: 1 - MAM01261c: -1 @@ -69459,7 +69483,7 @@ - confidence_score: 0 - !!omap - id: "MAR04095" - - name: "" + - name: "Acetyl-CoA hydrolase" - metabolites: !!omap - MAM01252m: 1 - MAM01261m: -1 @@ -69478,7 +69502,7 @@ - confidence_score: 0 - !!omap - id: "MAR04101" - - name: "" + - name: "GTP:oxaloacetate carboxy-lyase (adding GTP" - metabolites: !!omap - MAM01596c: 1 - MAM01948c: 1 @@ -69497,7 +69521,7 @@ - confidence_score: 0 - !!omap - id: "MAR04103" - - name: "" + - name: "GTP:oxaloacetate carboxy-lyase (adding GTP" - metabolites: !!omap - MAM01596m: 1 - MAM01948m: 1 @@ -69516,7 +69540,7 @@ - confidence_score: 0 - !!omap - id: "MAR04143" - - name: "" + - name: "Pyruvate:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -69537,7 +69561,7 @@ - confidence_score: 0 - !!omap - id: "MAR04193" - - name: "" + - name: "CTP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM01424c: -1 - MAM01623c: 1 @@ -69655,7 +69679,7 @@ - confidence_score: 0 - !!omap - id: "MAR08502" - - name: "" + - name: "(R)-Lactaldehyde:NAD+ oxidoreductase (glutathione-formylating)" - metabolites: !!omap - MAM00168c: -1 - MAM01715c: 1 @@ -69695,7 +69719,7 @@ - confidence_score: 0 - !!omap - id: "MAR08504" - - name: "" + - name: "(R)-Lactaldehyde:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01715c: -1 - MAM01716c: 1 @@ -69792,7 +69816,7 @@ - confidence_score: 0 - !!omap - id: "MAR08511" - - name: "" + - name: "(R)-S-Lactoylglutathione hydrolase" - metabolites: !!omap - MAM00168m: -1 - MAM01716m: 1 @@ -69811,7 +69835,7 @@ - confidence_score: 0 - !!omap - id: "MAR08512" - - name: "" + - name: "(R)-Lactate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01716c: -1 - MAM02039c: 1 @@ -69830,7 +69854,7 @@ - confidence_score: 0 - !!omap - id: "MAR08514" - - name: "" + - name: "(S)-Lactate:ferricytochrome-c 2-oxidoreductase" - metabolites: !!omap - MAM01824m: -2 - MAM01826m: 2 @@ -69849,7 +69873,7 @@ - confidence_score: 0 - !!omap - id: "MAR08516" - - name: "" + - name: "glycerone-phosphate phosphate-lyase (methylglyoxal-forming)" - metabolites: !!omap - MAM01690c: -1 - MAM02475c: 1 @@ -69866,7 +69890,7 @@ - confidence_score: 0 - !!omap - id: "MAR08517" - - name: "" + - name: "glycerone-phosphate phosphate-lyase (methylglyoxal-forming)" - metabolites: !!omap - MAM01939c: -1 - MAM02475c: 1 @@ -69883,7 +69907,7 @@ - confidence_score: 0 - !!omap - id: "MAR04280" - - name: "" + - name: "(S)-Lactate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02403m: 1 @@ -69902,7 +69926,7 @@ - confidence_score: 0 - !!omap - id: "MAR00153" - - name: "" + - name: "Propanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -69940,7 +69964,7 @@ - confidence_score: 0 - !!omap - id: "MAR03797" - - name: "" + - name: "Propanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334m: -1 - MAM01371m: 1 @@ -69980,7 +70004,7 @@ - confidence_score: 0 - !!omap - id: "MAR04105" - - name: "" + - name: "malonyl-CoA carboxy-lyase (acetyl-CoA-forming)" - metabolites: !!omap - MAM01261c: 1 - MAM01596c: 1 @@ -69998,7 +70022,7 @@ - confidence_score: 0 - !!omap - id: "MAR04106" - - name: "" + - name: "malonyl-CoA carboxy-lyase (acetyl-CoA-forming)" - metabolites: !!omap - MAM01261m: 1 - MAM01596m: 1 @@ -70016,7 +70040,7 @@ - confidence_score: 0 - !!omap - id: "MAR04107" - - name: "" + - name: "malonyl-CoA carboxy-lyase (acetyl-CoA-forming)" - metabolites: !!omap - MAM01261x: 1 - MAM01596x: 1 @@ -70034,7 +70058,7 @@ - confidence_score: 0 - !!omap - id: "MAR04282" - - name: "" + - name: "3-Oxopropanoate:NAD+ oxidoreductase (decarboxylating, CoA-acetylating)" - metabolites: !!omap - MAM00900m: -1 - MAM01261m: 1 @@ -70054,7 +70078,7 @@ - confidence_score: 0 - !!omap - id: "MAR04331" - - name: "" + - name: "Propionyladenylate:CoA propionyltransferase" - metabolites: !!omap - MAM01334c: -1 - MAM01597c: 1 @@ -70073,7 +70097,7 @@ - confidence_score: 0 - !!omap - id: "MAR04459" - - name: "" + - name: "ATP:propanoate adenylyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM02039c: -1 @@ -70092,7 +70116,7 @@ - confidence_score: 0 - !!omap - id: "MAR04460" - - name: "" + - name: "ATP:propanoate adenylyltransferase" - metabolites: !!omap - MAM01371m: -1 - MAM02039m: -1 @@ -70111,7 +70135,7 @@ - confidence_score: 0 - !!omap - id: "MAR04464" - - name: "" + - name: "Acetoacetate carboxy-lyase (acetone-forming)" - metabolites: !!omap - MAM01253m: -1 - MAM01256m: 1 @@ -70129,7 +70153,7 @@ - confidence_score: 0 - !!omap - id: "MAR04497" - - name: "" + - name: "3-hydroxypropanoate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00900m: 1 - MAM02039m: 1 @@ -70167,7 +70191,7 @@ - confidence_score: 0 - !!omap - id: "MAR08078" - - name: "" + - name: "propanoyl-CoA:oxaloacetate C-propanoyltransferase (thioester-hydrolysing, 1-carboxyethyl-forming)" - metabolites: !!omap - MAM00665c: 1 - MAM01597c: 1 @@ -70187,7 +70211,7 @@ - confidence_score: 0 - !!omap - id: "MAR09803" - - name: "" + - name: "3-oxopropionyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: -2 - MAM02040m: 1 @@ -70207,7 +70231,7 @@ - confidence_score: 0 - !!omap - id: "MAR09804" - - name: "" + - name: "3-hydroxypropionyl-CoA:NADP+ oxidoreductase" - metabolites: !!omap - MAM00799m: -1 - MAM02039m: 1 @@ -70226,7 +70250,7 @@ - confidence_score: 0 - !!omap - id: "MAR00718" - - name: "" + - name: "2-Hydroxyglutarate:(acceptor) 2-oxidoreductase" - metabolites: !!omap - MAM00653c: 1 - MAM01306c: -1 @@ -70263,7 +70287,7 @@ - confidence_score: 0 - !!omap - id: "MAR01434" - - name: "" + - name: "acetyl-CoA:acetyl-CoA C-acetyltransferase" - metabolites: !!omap - MAM01255c: -1 - MAM01261c: 2 @@ -70280,7 +70304,7 @@ - confidence_score: 0 - !!omap - id: "MAR01436" - - name: "" + - name: "Acetoacetate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01253c: -1 - MAM01255c: 1 @@ -70300,7 +70324,7 @@ - confidence_score: 0 - !!omap - id: "MAR03163" - - name: "" + - name: "butanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM01412m: -1 - MAM01622m: 1 @@ -70318,7 +70342,7 @@ - confidence_score: 0 - !!omap - id: "MAR04461" - - name: "" + - name: "(R)-3-Hydroxybutanoate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00157m: -1 - MAM01253m: 1 @@ -70337,7 +70361,7 @@ - confidence_score: 0 - !!omap - id: "MAR04604" - - name: "" + - name: "acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)" - metabolites: !!omap - MAM01255x: -1 - MAM01261x: -1 @@ -70357,7 +70381,7 @@ - confidence_score: 0 - !!omap - id: "MAR05351" - - name: "" + - name: "2-hydroxybutyrate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00648c: -1 - MAM00671c: 1 @@ -70376,7 +70400,7 @@ - confidence_score: 0 - !!omap - id: "MAR07709" - - name: "" + - name: "(3R)-3-hydroxybutanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00159m: -1 - MAM01622m: 1 @@ -70393,7 +70417,7 @@ - confidence_score: 0 - !!omap - id: "MAR04052" - - name: "" + - name: "ATP:D-ribose-5-phosphate diphosphotransferase" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -70412,7 +70436,7 @@ - confidence_score: 0 - !!omap - id: "MAR04304" - - name: "" + - name: "D-glucose-6-phosphate:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM01961r: 1 - MAM01968r: -1 @@ -70431,7 +70455,7 @@ - confidence_score: 0 - !!omap - id: "MAR04306" - - name: "" + - name: "D-glucose-6-phosphate:NADP+ 1-oxidoreductase" - metabolites: !!omap - MAM01961c: -1 - MAM01968c: 1 @@ -70450,7 +70474,7 @@ - confidence_score: 0 - !!omap - id: "MAR04350" - - name: "" + - name: "ATP:D-ribose 5-phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -70469,7 +70493,7 @@ - confidence_score: 0 - !!omap - id: "MAR04351" - - name: "" + - name: "D-ribose-5-phosphate aldose-ketose-isomerase" - metabolites: !!omap - MAM02845r: -1 - MAM02846r: 1 @@ -70485,7 +70509,7 @@ - confidence_score: 0 - !!omap - id: "MAR04352" - - name: "" + - name: "D-ribose-5-phosphate aldose-ketose-isomerase" - metabolites: !!omap - MAM02845c: -1 - MAM02846c: 1 @@ -70501,7 +70525,7 @@ - confidence_score: 0 - !!omap - id: "MAR04354" - - name: "" + - name: "D-Ribose 1,5-phosphomutase" - metabolites: !!omap - MAM02844c: -1 - MAM02845c: 1 @@ -70517,7 +70541,7 @@ - confidence_score: 0 - !!omap - id: "MAR04398" - - name: "" + - name: "2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)" - metabolites: !!omap - MAM00640c: -1 - MAM01249c: 1 @@ -70534,7 +70558,7 @@ - confidence_score: 0 - !!omap - id: "MAR04404" - - name: "" + - name: "D-Fructose 6-phosphate:D-glyceraldehyde-3-phosphate glycolaldehyde transferase" - metabolites: !!omap - MAM01761c: -1 - MAM01785c: -1 @@ -70552,7 +70576,7 @@ - confidence_score: 0 - !!omap - id: "MAR04473" - - name: "" + - name: "6-phospho-D-gluconate:NADP+ 2-oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01169r: -1 - MAM01596r: 1 @@ -70571,7 +70595,7 @@ - confidence_score: 0 - !!omap - id: "MAR04474" - - name: "" + - name: "Phosphogluconate dehydrogenase" - metabolites: !!omap - MAM01169c: -1 - MAM01596c: 1 @@ -70581,16 +70605,16 @@ - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "ENSG00000142657" - - rxnNotes: "" + - rxnNotes: "Harpers illustrated Biochemistry (2009) 28th edition pages 174-183, ISBN:9781282335806" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.44" - - references: "PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792" + - references: "PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792;PMID:4382012;PMID:13575411" - subsystem: - "Pentose phosphate pathway" - confidence_score: 0 - !!omap - id: "MAR04476" - - name: "" + - name: "ATP:D-gluconate 6-phosphotransferase" - metabolites: !!omap - MAM01169c: -1 - MAM01285c: -1 @@ -70609,7 +70633,7 @@ - confidence_score: 0 - !!omap - id: "MAR04477" - - name: "" + - name: "D-Ribulose-5-phosphate 3-epimerase" - metabolites: !!omap - MAM01761c: -1 - MAM02846c: 1 @@ -70625,7 +70649,7 @@ - confidence_score: 0 - !!omap - id: "MAR04501" - - name: "" + - name: "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehyde transferase" - metabolites: !!omap - MAM01761c: -1 - MAM01939c: 1 @@ -70643,7 +70667,7 @@ - confidence_score: 0 - !!omap - id: "MAR04565" - - name: "" + - name: "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase" - metabolites: !!omap - MAM01785c: 1 - MAM01845c: 1 @@ -70661,7 +70685,7 @@ - confidence_score: 0 - !!omap - id: "MAR04567" - - name: "" + - name: "ATP:Sedoheptulose 7-phosphate 1-phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -70699,7 +70723,7 @@ - confidence_score: 0 - !!omap - id: "MAR09799" - - name: "" + - name: "ATP:sedoheptulose 7-phosphate" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -70718,7 +70742,7 @@ - confidence_score: 0 - !!omap - id: "MAR09800" - - name: "" + - name: "ATP:sedoheptulose 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -70737,7 +70761,7 @@ - confidence_score: 0 - !!omap - id: "MAR04623" - - name: "" + - name: "6-Phospho-D-glucono-1,5-lactone lactonohydrolase" - metabolites: !!omap - MAM01169r: 1 - MAM01961r: -1 @@ -70755,7 +70779,7 @@ - confidence_score: 0 - !!omap - id: "MAR04625" - - name: "" + - name: "6-Phospho-D-glucono-1,5-lactone lactonohydrolase" - metabolites: !!omap - MAM01169c: 1 - MAM01961c: -1 @@ -70773,7 +70797,7 @@ - confidence_score: 0 - !!omap - id: "MAR04710" - - name: "" + - name: "2-deoxy-D-ribose 1-phosphate 1,5-phosphomutase" - metabolites: !!omap - MAM00639c: -1 - MAM00640c: 1 @@ -70808,7 +70832,7 @@ - confidence_score: 0 - !!omap - id: "MAR08074" - - name: "" + - name: "ATP:2-deoxy-D-ribose 5-phosphotransferase" - metabolites: !!omap - MAM00640c: 1 - MAM01285c: 1 @@ -70827,7 +70851,7 @@ - confidence_score: 0 - !!omap - id: "MAR08653" - - name: "" + - name: "D-glucose-6-phosphate:NAD+ 1-oxidoreductase" - metabolites: !!omap - MAM01961r: -1 - MAM01968r: 1 @@ -70846,7 +70870,7 @@ - confidence_score: 0 - !!omap - id: "MAR03998" - - name: "" + - name: "ADP phosphohydrolase" - metabolites: !!omap - MAM01285c: -1 - MAM01334c: 1 @@ -70865,7 +70889,7 @@ - confidence_score: 0 - !!omap - id: "MAR04000" - - name: "" + - name: "ATP diphosphate-lyase (cyclizing" - metabolites: !!omap - MAM01371c: -1 - MAM01419c: 1 @@ -70882,7 +70906,7 @@ - confidence_score: 0 - !!omap - id: "MAR04002" - - name: "" + - name: "ATP:AMP phosphotransferase" - metabolites: !!omap - MAM01285c: -2 - MAM01334c: 1 @@ -70899,7 +70923,7 @@ - confidence_score: 0 - !!omap - id: "MAR04004" - - name: "" + - name: "ATP:AMP phosphotransferase" - metabolites: !!omap - MAM01285m: -2 - MAM01334m: 1 @@ -70916,7 +70940,7 @@ - confidence_score: 0 - !!omap - id: "MAR04010" - - name: "" + - name: "adenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01280c: 1 - MAM01334c: -1 @@ -70934,7 +70958,7 @@ - confidence_score: 0 - !!omap - id: "MAR04081" - - name: "" + - name: "adenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01280e: 1 - MAM01334e: -1 @@ -70952,7 +70976,7 @@ - confidence_score: 0 - !!omap - id: "MAR04082" - - name: "" + - name: "adenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01280m: 1 - MAM01334m: -1 @@ -70970,7 +70994,7 @@ - confidence_score: 0 - !!omap - id: "MAR04012" - - name: "" + - name: "ATP:adenosine 5'-phosphotransferase" - metabolites: !!omap - MAM01280c: -1 - MAM01285c: 1 @@ -70989,7 +71013,7 @@ - confidence_score: 0 - !!omap - id: "MAR04014" - - name: "" + - name: "adenosine 3',5'-phosphate 5'-nucleotidohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM01419c: -1 @@ -71007,7 +71031,7 @@ - confidence_score: 0 - !!omap - id: "MAR04020" - - name: "" + - name: "ATP:GMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -71025,7 +71049,7 @@ - confidence_score: 0 - !!omap - id: "MAR04022" - - name: "" + - name: "GTP diphosphate-lyase (cyclizing" - metabolites: !!omap - MAM01433c: 1 - MAM02034c: -1 @@ -71042,7 +71066,7 @@ - confidence_score: 0 - !!omap - id: "MAR04038" - - name: "" + - name: "IMP 1,2-hydrolase (decyclizing)" - metabolites: !!omap - MAM01804c: -1 - MAM02040c: 1 @@ -71059,7 +71083,7 @@ - confidence_score: 0 - !!omap - id: "MAR04040" - - name: "" + - name: "IMP:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -71079,7 +71103,7 @@ - confidence_score: 0 - !!omap - id: "MAR04042" - - name: "" + - name: "IMP:L-aspartate ligase (GDP-forming)" - metabolites: !!omap - MAM01282c: 1 - MAM01370c: -1 @@ -71100,7 +71124,7 @@ - confidence_score: 0 - !!omap - id: "MAR04046" - - name: "" + - name: "Xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -71123,7 +71147,7 @@ - confidence_score: 0 - !!omap - id: "MAR04048" - - name: "" + - name: "Guanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase" - metabolites: !!omap - MAM01433c: -1 - MAM02016c: 1 @@ -71141,7 +71165,7 @@ - confidence_score: 0 - !!omap - id: "MAR04080" - - name: "" + - name: "AMP aminohydrolase" - metabolites: !!omap - MAM01334c: -1 - MAM02040c: -1 @@ -71159,7 +71183,7 @@ - confidence_score: 0 - !!omap - id: "MAR04085" - - name: "" + - name: "AMP:diphosphate phospho-D-ribosyltransferase" - metabolites: !!omap - MAM01279c: 1 - MAM01334c: -1 @@ -71177,7 +71201,7 @@ - confidence_score: 0 - !!omap - id: "MAR04086" - - name: "" + - name: "AMP:diphosphate phospho-D-ribosyltransferase" - metabolites: !!omap - MAM01279e: 1 - MAM01334e: -1 @@ -71195,7 +71219,7 @@ - confidence_score: 0 - !!omap - id: "MAR04134" - - name: "" + - name: "GDP phosphohydrolase" - metabolites: !!omap - MAM01948e: -1 - MAM02016e: 1 @@ -71214,7 +71238,7 @@ - confidence_score: 0 - !!omap - id: "MAR04135" - - name: "" + - name: "ATP:GMP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -71232,7 +71256,7 @@ - confidence_score: 0 - !!omap - id: "MAR04168" - - name: "" + - name: "GTP diphosphohydrolase (diphosphate-forming)" - metabolites: !!omap - MAM02016c: 1 - MAM02034c: -1 @@ -71251,7 +71275,7 @@ - confidence_score: 0 - !!omap - id: "MAR04171" - - name: "" + - name: "GTP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM01948c: -1 - MAM02034c: 1 @@ -71270,7 +71294,7 @@ - confidence_score: 0 - !!omap - id: "MAR04290" - - name: "" + - name: "ITP phosphohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -71289,7 +71313,7 @@ - confidence_score: 0 - !!omap - id: "MAR04406" - - name: "" + - name: "5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)" - metabolites: !!omap - MAM01131c: 1 - MAM01974c: 1 @@ -71309,7 +71333,7 @@ - confidence_score: 0 - !!omap - id: "MAR04412" - - name: "" + - name: "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)" - metabolites: !!omap - MAM01282c: 1 - MAM01334c: -1 @@ -71326,7 +71350,7 @@ - confidence_score: 0 - !!omap - id: "MAR04417" - - name: "" + - name: "inosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02167c: -1 @@ -71344,7 +71368,7 @@ - confidence_score: 0 - !!omap - id: "MAR04418" - - name: "" + - name: "IMP:diphosphate phospho-D-ribosyltransferase" - metabolites: !!omap - MAM02159c: 1 - MAM02167c: -1 @@ -71362,7 +71386,7 @@ - confidence_score: 0 - !!omap - id: "MAR04419" - - name: "" + - name: "inosine-5'-phosphate:NADP+ oxidoreductase (aminating)" - metabolites: !!omap - MAM02016c: -1 - MAM02039c: -1 @@ -71382,7 +71406,7 @@ - confidence_score: 0 - !!omap - id: "MAR04421" - - name: "" + - name: "dATP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM01637c: -1 - MAM01642c: 1 @@ -71401,7 +71425,7 @@ - confidence_score: 0 - !!omap - id: "MAR04449" - - name: "" + - name: "guanosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02016c: -1 - MAM02038c: 1 @@ -71419,7 +71443,7 @@ - confidence_score: 0 - !!omap - id: "MAR04450" - - name: "" + - name: "guanosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02016e: -1 - MAM02038e: 1 @@ -71437,7 +71461,7 @@ - confidence_score: 0 - !!omap - id: "MAR04451" - - name: "" + - name: "ATP:guanosine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -71456,7 +71480,7 @@ - confidence_score: 0 - !!omap - id: "MAR04452" - - name: "" + - name: "GMP:diphosphate 5-phospho-alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02016c: -1 - MAM02037c: 1 @@ -71474,7 +71498,7 @@ - confidence_score: 0 - !!omap - id: "MAR04453" - - name: "" + - name: "Xanthosine-5'-phosphate:ammonia ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -71495,7 +71519,7 @@ - confidence_score: 0 - !!omap - id: "MAR04480" - - name: "" + - name: "ATP:dAMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -71513,7 +71537,7 @@ - confidence_score: 0 - !!omap - id: "MAR04481" - - name: "" + - name: "Adenosine aminohydrolase" - metabolites: !!omap - MAM01280c: -1 - MAM02040c: -1 @@ -71531,7 +71555,7 @@ - confidence_score: 0 - !!omap - id: "MAR04482" - - name: "" + - name: "Adenosine aminohydrolase" - metabolites: !!omap - MAM01280e: -1 - MAM02040e: -1 @@ -71549,7 +71573,7 @@ - confidence_score: 0 - !!omap - id: "MAR04486" - - name: "" + - name: "ITP:D-glucose 6-phosphotransferase" - metabolites: !!omap - MAM01965c: -1 - MAM01968c: 1 @@ -71568,7 +71592,7 @@ - confidence_score: 0 - !!omap - id: "MAR04487" - - name: "" + - name: "dATP:D-glucose 6-phosphotransferase" - metabolites: !!omap - MAM01637c: 1 - MAM01642c: -1 @@ -71587,7 +71611,7 @@ - confidence_score: 0 - !!omap - id: "MAR04488" - - name: "" + - name: "ITP:D-fructose 6-phosphotransferase" - metabolites: !!omap - MAM01840c: -1 - MAM01845c: 1 @@ -71606,7 +71630,7 @@ - confidence_score: 0 - !!omap - id: "MAR04489" - - name: "" + - name: "dATP:D-fructose 6-phosphotransferase" - metabolites: !!omap - MAM01637c: 1 - MAM01642c: -1 @@ -71625,7 +71649,7 @@ - confidence_score: 0 - !!omap - id: "MAR04492" - - name: "" + - name: "ITP:D-mannose 6-phosphotransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02161c: 1 @@ -71644,7 +71668,7 @@ - confidence_score: 0 - !!omap - id: "MAR04493" - - name: "" + - name: "dATP:D-mannose 6-phosphotransferase" - metabolites: !!omap - MAM01637c: 1 - MAM01642c: -1 @@ -71663,7 +71687,7 @@ - confidence_score: 0 - !!omap - id: "MAR04495" - - name: "" + - name: "ITP:D-glucosamine 6-phosphotransferase" - metabolites: !!omap - MAM01962c: -1 - MAM01963c: 1 @@ -71682,7 +71706,7 @@ - confidence_score: 0 - !!omap - id: "MAR04496" - - name: "" + - name: "dATP:D-glucosamine 6-phosphotransferase" - metabolites: !!omap - MAM01637c: 1 - MAM01642c: -1 @@ -71701,7 +71725,7 @@ - confidence_score: 0 - !!omap - id: "MAR04518" - - name: "" + - name: "Guanine aminohydrolase" - metabolites: !!omap - MAM02037c: -1 - MAM02040c: -1 @@ -71719,7 +71743,7 @@ - confidence_score: 0 - !!omap - id: "MAR04519" - - name: "" + - name: "hypoxanthine:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -71739,7 +71763,7 @@ - confidence_score: 0 - !!omap - id: "MAR04520" - - name: "" + - name: "Hypoxanthine:oxygen oxidoreductase" - metabolites: !!omap - MAM02040c: -1 - MAM02041c: 1 @@ -71758,7 +71782,7 @@ - confidence_score: 0 - !!omap - id: "MAR04573" - - name: "" + - name: "dGTP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM01680c: -1 - MAM01688c: 1 @@ -71777,7 +71801,7 @@ - confidence_score: 0 - !!omap - id: "MAR04574" - - name: "" + - name: "inosine:phosphate alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02159c: 1 - MAM02170c: -1 @@ -71795,7 +71819,7 @@ - confidence_score: 0 - !!omap - id: "MAR04600" - - name: "" + - name: "ATP:deoxyguanosine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -71814,7 +71838,7 @@ - confidence_score: 0 - !!omap - id: "MAR04602" - - name: "" + - name: "2'-deoxyguanosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01669c: 1 - MAM01686c: -1 @@ -71832,7 +71856,7 @@ - confidence_score: 0 - !!omap - id: "MAR04603" - - name: "" + - name: "Deoxyguanosine:orthophosphate ribosyltransferase" - metabolites: !!omap - MAM00639c: -1 - MAM01669c: 1 @@ -71850,7 +71874,7 @@ - confidence_score: 0 - !!omap - id: "MAR04611" - - name: "" + - name: "2'-deoxyadenosine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01371c: -1 - MAM01642c: 1 @@ -71869,7 +71893,7 @@ - confidence_score: 0 - !!omap - id: "MAR04612" - - name: "" + - name: "2'-deoxyadenosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01285c: -1 - MAM01637c: 1 @@ -71888,7 +71912,7 @@ - confidence_score: 0 - !!omap - id: "MAR04614" - - name: "" + - name: "2'-deoxyguanosine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01688c: 1 - MAM02034c: -1 @@ -71907,7 +71931,7 @@ - confidence_score: 0 - !!omap - id: "MAR04615" - - name: "" + - name: "2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01680c: 1 - MAM01948c: -1 @@ -71926,7 +71950,7 @@ - confidence_score: 0 - !!omap - id: "MAR04617" - - name: "" + - name: "2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01623c: -1 - MAM01645c: 1 @@ -71945,7 +71969,7 @@ - confidence_score: 0 - !!omap - id: "MAR04618" - - name: "" + - name: "2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01756c: 1 - MAM02040c: 1 @@ -71964,7 +71988,7 @@ - confidence_score: 0 - !!omap - id: "MAR04619" - - name: "" + - name: "2'-deoxycytidine diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01424c: -1 - MAM01643c: 1 @@ -71983,7 +72007,7 @@ - confidence_score: 0 - !!omap - id: "MAR04621" - - name: "" + - name: "2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01754c: 1 - MAM02040c: 1 @@ -72002,7 +72026,7 @@ - confidence_score: 0 - !!omap - id: "MAR04632" - - name: "" + - name: "2'-deoxyadenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01639c: -1 - MAM01666c: 1 @@ -72020,7 +72044,7 @@ - confidence_score: 0 - !!omap - id: "MAR04646" - - name: "" + - name: "xanthine:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -72040,7 +72064,7 @@ - confidence_score: 0 - !!omap - id: "MAR04648" - - name: "" + - name: "xanthine:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039x: 1 - MAM02040x: -1 @@ -72060,7 +72084,7 @@ - confidence_score: 0 - !!omap - id: "MAR04649" - - name: "" + - name: "Xanthine:oxygen oxidoreductase" - metabolites: !!omap - MAM02040c: -1 - MAM02041c: 1 @@ -72079,7 +72103,7 @@ - confidence_score: 0 - !!omap - id: "MAR04650" - - name: "" + - name: "Xanthine:oxygen oxidoreductase" - metabolites: !!omap - MAM02040x: -1 - MAM02041x: 1 @@ -72098,7 +72122,7 @@ - confidence_score: 0 - !!omap - id: "MAR04651" - - name: "" + - name: "guanosine:phosphate alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02037c: 1 - MAM02038c: -1 @@ -72116,7 +72140,7 @@ - confidence_score: 0 - !!omap - id: "MAR04663" - - name: "" + - name: "xanthosine:orthophosphate ribosyltransferase" - metabolites: !!omap - MAM02751c: -1 - MAM02844c: 1 @@ -72134,7 +72158,7 @@ - confidence_score: 0 - !!omap - id: "MAR04664" - - name: "" + - name: "XMP:pyrophosphate phosphoribosyltransferase" - metabolites: !!omap - MAM02759c: 1 - MAM02806c: -1 @@ -72152,7 +72176,7 @@ - confidence_score: 0 - !!omap - id: "MAR04694" - - name: "" + - name: "deoxyadenosine aminohydrolase" - metabolites: !!omap - MAM01666c: -1 - MAM01671c: 1 @@ -72170,7 +72194,7 @@ - confidence_score: 0 - !!omap - id: "MAR04695" - - name: "" + - name: "Deoxyadenosine:orthophosphate ribosyltransferase" - metabolites: !!omap - MAM00639c: -1 - MAM01279c: -1 @@ -72188,7 +72212,7 @@ - confidence_score: 0 - !!omap - id: "MAR04705" - - name: "" + - name: "xanthosine 5'-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -72206,7 +72230,7 @@ - confidence_score: 0 - !!omap - id: "MAR04709" - - name: "" + - name: "Deoxyinosine:orthophosphate ribosyltransferase" - metabolites: !!omap - MAM00639c: -1 - MAM01671c: 1 @@ -72224,7 +72248,7 @@ - confidence_score: 0 - !!omap - id: "MAR04799" - - name: "" + - name: "5-Phospho-D-ribosylamine:glycine ligase (ADP-forming)" - metabolites: !!omap - MAM01131c: -1 - MAM01285c: 1 @@ -72245,7 +72269,7 @@ - confidence_score: 0 - !!omap - id: "MAR04802" - - name: "" + - name: "2-(Formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)" - metabolites: !!omap - MAM01132c: -1 - MAM01285c: 1 @@ -72265,7 +72289,7 @@ - confidence_score: 0 - !!omap - id: "MAR04804" - - name: "" + - name: "1-(5-phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase" - metabolites: !!omap - MAM01130c: -1 - MAM01305c: 1 @@ -72283,7 +72307,7 @@ - confidence_score: 0 - !!omap - id: "MAR04808" - - name: "" + - name: "5'-Phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)" - metabolites: !!omap - MAM01132c: 1 - MAM01285c: 1 @@ -72306,7 +72330,7 @@ - confidence_score: 0 - !!omap - id: "MAR04810" - - name: "" + - name: "1-(5-Phosphoribosyl)-5-amino-4-carboxyimidazole:L-aspartate ligase (ADP-forming)" - metabolites: !!omap - MAM01130c: -1 - MAM01285c: 1 @@ -72327,7 +72351,7 @@ - confidence_score: 0 - !!omap - id: "MAR04812" - - name: "" + - name: "1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase" - metabolites: !!omap - MAM01304c: -1 - MAM01862c: -1 @@ -72344,7 +72368,7 @@ - confidence_score: 0 - !!omap - id: "MAR04814" - - name: "" + - name: "10-Formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase" - metabolites: !!omap - MAM00266c: -1 - MAM01304c: -1 @@ -72362,7 +72386,7 @@ - confidence_score: 0 - !!omap - id: "MAR05301" - - name: "" + - name: "GTP:uridine 5'-phosphotransferase" - metabolites: !!omap - MAM01948c: 1 - MAM02034c: -1 @@ -72381,7 +72405,7 @@ - confidence_score: 0 - !!omap - id: "MAR05353" - - name: "" + - name: "ATP:dGMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72399,7 +72423,7 @@ - confidence_score: 0 - !!omap - id: "MAR06601" - - name: "" + - name: "Allantoate amidinohydrolase" - metabolites: !!omap - MAM01312c: -1 - MAM02040c: -1 @@ -72509,7 +72533,7 @@ - confidence_score: 0 - !!omap - id: "MAR06609" - - name: "" + - name: "(S)-allantoin amidohydrolase" - metabolites: !!omap - MAM01312c: 1 - MAM01313c: -1 @@ -72545,7 +72569,7 @@ - confidence_score: 0 - !!omap - id: "MAR06611" - - name: "" + - name: "urate:oxygen oxidoreductase" - metabolites: !!omap - MAM01104c: 1 - MAM02040c: -1 @@ -72564,7 +72588,7 @@ - confidence_score: 0 - !!omap - id: "MAR07144" - - name: "" + - name: "ADP-ribose ribophosphohydrolase" - metabolites: !!omap - MAM01288c: -1 - MAM01334c: 1 @@ -72583,7 +72607,7 @@ - confidence_score: 0 - !!omap - id: "MAR08755" - - name: "" + - name: "Hypoxanthine:oxygen oxidoreductase" - metabolites: !!omap - MAM02040x: -1 - MAM02041x: 1 @@ -72602,7 +72626,7 @@ - confidence_score: 0 - !!omap - id: "MAR09797" - - name: "" + - name: "Adenine aminohydrolase" - metabolites: !!omap - MAM01279c: -1 - MAM02040c: -1 @@ -72620,7 +72644,7 @@ - confidence_score: 0 - !!omap - id: "MAR04016" - - name: "" + - name: "ATP:GDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72638,7 +72662,7 @@ - confidence_score: 0 - !!omap - id: "MAR04018" - - name: "" + - name: "ATP:GDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -72656,7 +72680,7 @@ - confidence_score: 0 - !!omap - id: "MAR04044" - - name: "" + - name: "ATP:dADP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72674,7 +72698,7 @@ - confidence_score: 0 - !!omap - id: "MAR04291" - - name: "" + - name: "ATP:IDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72692,7 +72716,7 @@ - confidence_score: 0 - !!omap - id: "MAR04420" - - name: "" + - name: "ATP:dADP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -72710,7 +72734,7 @@ - confidence_score: 0 - !!omap - id: "MAR04570" - - name: "" + - name: "ATP:dGDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72728,7 +72752,7 @@ - confidence_score: 0 - !!omap - id: "MAR04572" - - name: "" + - name: "ATP:dGDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -72746,7 +72770,7 @@ - confidence_score: 0 - !!omap - id: "MAR04006" - - name: "" + - name: "ATP:UDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72764,7 +72788,7 @@ - confidence_score: 0 - !!omap - id: "MAR04028" - - name: "" + - name: "ATP:CDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72782,7 +72806,7 @@ - confidence_score: 0 - !!omap - id: "MAR04030" - - name: "" + - name: "ATP:CDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -72800,7 +72824,7 @@ - confidence_score: 0 - !!omap - id: "MAR04670" - - name: "" + - name: "ATP:dCDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72818,7 +72842,7 @@ - confidence_score: 0 - !!omap - id: "MAR04673" - - name: "" + - name: "ATP:dUDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72836,7 +72860,7 @@ - confidence_score: 0 - !!omap - id: "MAR04675" - - name: "" + - name: "ATP:dUDP phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -72908,7 +72932,7 @@ - confidence_score: 0 - !!omap - id: "MAR04635" - - name: "" + - name: "ATP:dTDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -72926,7 +72950,7 @@ - confidence_score: 0 - !!omap - id: "MAR03793" - - name: "" + - name: "(R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase" - metabolites: !!omap - MAM00661m: -1 - MAM01307m: -1 @@ -72944,7 +72968,7 @@ - confidence_score: 0 - !!omap - id: "MAR03931" - - name: "" + - name: "NADPH:oxidized-thioredoxin oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02554c: 1 @@ -72982,7 +73006,7 @@ - confidence_score: 0 - !!omap - id: "MAR03970" - - name: "" + - name: "uridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -73000,7 +73024,7 @@ - confidence_score: 0 - !!omap - id: "MAR04008" - - name: "" + - name: "ATP:UMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -73018,7 +73042,7 @@ - confidence_score: 0 - !!omap - id: "MAR04032" - - name: "" + - name: "UTP:ammonia ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -73039,7 +73063,7 @@ - confidence_score: 0 - !!omap - id: "MAR04034" - - name: "" + - name: "HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)" - metabolites: !!omap - MAM01285c: 2 - MAM01371c: -2 @@ -73062,7 +73086,7 @@ - confidence_score: 0 - !!omap - id: "MAR04036" - - name: "" + - name: "orotidine-5'-phosphate carboxy-lyase (UMP-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -73080,7 +73104,7 @@ - confidence_score: 0 - !!omap - id: "MAR04050" - - name: "" + - name: "carbamoyl-phosphate:L-aspartate carbamoyltransferase" - metabolites: !!omap - MAM01370c: 1 - MAM01420c: 1 @@ -73099,7 +73123,7 @@ - confidence_score: 0 - !!omap - id: "MAR04056" - - name: "" + - name: "thymidylate 5'-phosphohydrolase" - metabolites: !!omap - MAM01752c: -1 - MAM02040c: -1 @@ -73117,7 +73141,7 @@ - confidence_score: 0 - !!omap - id: "MAR04059" - - name: "" + - name: "UDP phosphohydrolase" - metabolites: !!omap - MAM02039r: 1 - MAM02040r: -1 @@ -73136,7 +73160,7 @@ - confidence_score: 0 - !!omap - id: "MAR04060" - - name: "" + - name: "UDP phosphohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -73155,7 +73179,7 @@ - confidence_score: 0 - !!omap - id: "MAR04127" - - name: "" + - name: "UDP-glucose glucophosphohydrolase" - metabolites: !!omap - MAM01967c: 1 - MAM02039c: 2 @@ -73174,7 +73198,7 @@ - confidence_score: 0 - !!omap - id: "MAR04177" - - name: "" + - name: "cytidine-5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01590c: -1 - MAM01630c: 1 @@ -73192,7 +73216,7 @@ - confidence_score: 0 - !!omap - id: "MAR04179" - - name: "" + - name: "cytidine-5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01590e: -1 - MAM01630e: 1 @@ -73210,7 +73234,7 @@ - confidence_score: 0 - !!omap - id: "MAR04182" - - name: "" + - name: "GTP:cytidine 5'-phosphotransferase" - metabolites: !!omap - MAM01590c: 1 - MAM01630c: -1 @@ -73229,7 +73253,7 @@ - confidence_score: 0 - !!omap - id: "MAR04183" - - name: "" + - name: "CDP phosphohydrolase" - metabolites: !!omap - MAM01424e: -1 - MAM01590e: 1 @@ -73248,7 +73272,7 @@ - confidence_score: 0 - !!omap - id: "MAR04192" - - name: "" + - name: "CTP phosphohydrolase" - metabolites: !!omap - MAM01424e: 1 - MAM01623e: -1 @@ -73267,7 +73291,7 @@ - confidence_score: 0 - !!omap - id: "MAR04194" - - name: "" + - name: "UTP:L-glutamine amido-ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -73290,7 +73314,7 @@ - confidence_score: 0 - !!omap - id: "MAR04210" - - name: "" + - name: "UTP:pyruvate 2-O-phosphotransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02696c: -1 @@ -73309,7 +73333,7 @@ - confidence_score: 0 - !!omap - id: "MAR04211" - - name: "" + - name: "uridine triphosphate pyrophosphohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -73328,7 +73352,7 @@ - confidence_score: 0 - !!omap - id: "MAR04343" - - name: "" + - name: "UMP:diphosphate phospho-alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02759c: 1 - MAM02806c: -1 @@ -73346,7 +73370,7 @@ - confidence_score: 0 - !!omap - id: "MAR04345" - - name: "" + - name: "5,6-Dihydrouracil:NADP+ oxidoreductase" - metabolites: !!omap - MAM01052c: -1 - MAM02039c: 1 @@ -73365,7 +73389,7 @@ - confidence_score: 0 - !!omap - id: "MAR04346" - - name: "" + - name: "5,6-Dihydrouracil amidohydrolase" - metabolites: !!omap - MAM00923c: 1 - MAM01052c: -1 @@ -73383,7 +73407,7 @@ - confidence_score: 0 - !!omap - id: "MAR04470" - - name: "" + - name: "5,6-dihydrothymine:NAD+ oxidoreductase" - metabolites: !!omap - MAM01705c: 1 - MAM02039c: -1 @@ -73402,7 +73426,7 @@ - confidence_score: 0 - !!omap - id: "MAR04471" - - name: "" + - name: "5,6-dihydrothymine:NAD+ oxidoreductase" - metabolites: !!omap - MAM01705m: 1 - MAM02039m: -1 @@ -73421,7 +73445,7 @@ - confidence_score: 0 - !!omap - id: "MAR04472" - - name: "" + - name: "5,6-Dihydrothymine:NADP+ oxidoreductase" - metabolites: !!omap - MAM01705c: 1 - MAM02039c: -1 @@ -73440,7 +73464,7 @@ - confidence_score: 0 - !!omap - id: "MAR04484" - - name: "" + - name: "thymidylate 5'-phosphohydrolase" - metabolites: !!omap - MAM01752m: -1 - MAM02040m: -1 @@ -73458,7 +73482,7 @@ - confidence_score: 0 - !!omap - id: "MAR04485" - - name: "" + - name: "thymidine:phosphate deoxy-alpha-D-ribosyltransferase" - metabolites: !!omap - MAM00639c: -1 - MAM02751c: 1 @@ -73476,7 +73500,7 @@ - confidence_score: 0 - !!omap - id: "MAR04510" - - name: "" + - name: "2'-deoxycytidine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01644c: -1 - MAM01668c: 1 @@ -73494,7 +73518,7 @@ - confidence_score: 0 - !!omap - id: "MAR04512" - - name: "" + - name: "ATP:dCMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -73512,7 +73536,7 @@ - confidence_score: 0 - !!omap - id: "MAR04513" - - name: "" + - name: "ATP:deoxycitidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -73531,7 +73555,7 @@ - confidence_score: 0 - !!omap - id: "MAR04514" - - name: "" + - name: "deoxycytidine aminohydrolase" - metabolites: !!omap - MAM01668c: -1 - MAM01673c: 1 @@ -73549,7 +73573,7 @@ - confidence_score: 0 - !!omap - id: "MAR04577" - - name: "" + - name: "Orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase" - metabolites: !!omap - MAM02659c: 1 - MAM02660c: -1 @@ -73567,7 +73591,7 @@ - confidence_score: 0 - !!omap - id: "MAR04579" - - name: "" + - name: "uridine:phosphate alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02751c: -1 - MAM02844c: 1 @@ -73585,7 +73609,7 @@ - confidence_score: 0 - !!omap - id: "MAR04580" - - name: "" + - name: "Cytidine aminohydrolase" - metabolites: !!omap - MAM01630c: -1 - MAM02040c: -1 @@ -73603,7 +73627,7 @@ - confidence_score: 0 - !!omap - id: "MAR04608" - - name: "" + - name: "(S)-dihydroorotate amidohydrolase" - metabolites: !!omap - MAM00180c: -1 - MAM02039c: 1 @@ -73621,7 +73645,7 @@ - confidence_score: 0 - !!omap - id: "MAR04575" - - name: "" + - name: "(S)-dihydroorotate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00180c: -1 - MAM02659c: 1 @@ -73639,7 +73663,7 @@ - confidence_score: 0 - !!omap - id: "MAR04637" - - name: "" + - name: "ATP:dTMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -73657,7 +73681,7 @@ - confidence_score: 0 - !!omap - id: "MAR04642" - - name: "" + - name: "2'-deoxyuridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01673c: 1 - MAM01755c: -1 @@ -73675,7 +73699,7 @@ - confidence_score: 0 - !!omap - id: "MAR04643" - - name: "" + - name: "dUTP nucleotidohydrolase" - metabolites: !!omap - MAM01755m: 1 - MAM01756m: -1 @@ -73694,7 +73718,7 @@ - confidence_score: 0 - !!omap - id: "MAR04644" - - name: "" + - name: "5,10-Methylenetetrahydrofolate:dUMP C-methyltransferase" - metabolites: !!omap - MAM01045c: -1 - MAM01700c: 1 @@ -73712,7 +73736,7 @@ - confidence_score: 0 - !!omap - id: "MAR04672" - - name: "" + - name: "dCTP aminohydrolase" - metabolites: !!omap - MAM01645c: -1 - MAM01756c: 1 @@ -73749,7 +73773,7 @@ - confidence_score: 0 - !!omap - id: "MAR04736" - - name: "" + - name: "(R)-5,6-dihydrothymine amidohydrolase" - metabolites: !!omap - MAM00922c: 1 - MAM01705c: -1 @@ -73767,7 +73791,7 @@ - confidence_score: 0 - !!omap - id: "MAR04819" - - name: "" + - name: "(R)-3-ureidoisobutyrate amidohydrolase" - metabolites: !!omap - MAM00922c: -1 - MAM01596c: 1 @@ -73787,7 +73811,7 @@ - confidence_score: 0 - !!omap - id: "MAR05299" - - name: "" + - name: "ATP:uridine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -73825,7 +73849,7 @@ - confidence_score: 0 - !!omap - id: "MAR05415" - - name: "" + - name: "2'-deoxyadenosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01285m: 1 - MAM01637m: -1 @@ -73844,7 +73868,7 @@ - confidence_score: 0 - !!omap - id: "MAR05416" - - name: "" + - name: "2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01680m: -1 - MAM01948m: 1 @@ -73863,7 +73887,7 @@ - confidence_score: 0 - !!omap - id: "MAR05417" - - name: "" + - name: "NADPH:oxidized-thioredoxin oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02486m: -1 @@ -73918,7 +73942,7 @@ - confidence_score: 0 - !!omap - id: "MAR06621" - - name: "" + - name: "2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01756m: -1 - MAM02040m: -1 @@ -73937,7 +73961,7 @@ - confidence_score: 0 - !!omap - id: "MAR06622" - - name: "" + - name: "2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase" - metabolites: !!omap - MAM01756n: 1 - MAM02040n: 1 @@ -74013,7 +74037,7 @@ - confidence_score: 0 - !!omap - id: "MAR07744" - - name: "" + - name: "uracil hydro-lyase (adding D-ribose 5-phosphate" - metabolites: !!omap - MAM02040c: -1 - MAM02807c: -1 @@ -74049,7 +74073,7 @@ - confidence_score: 0 - !!omap - id: "MAR08637" - - name: "" + - name: "Cytosine aminohydrolase" - metabolites: !!omap - MAM01632c: -1 - MAM02040c: -1 @@ -74086,7 +74110,7 @@ - confidence_score: 0 - !!omap - id: "MAR03966" - - name: "" + - name: "ATP diphosphohydrolase (diphosphate-forming)" - metabolites: !!omap - MAM01334m: 1 - MAM01371m: -1 @@ -74123,7 +74147,7 @@ - confidence_score: 0 - !!omap - id: "MAR03968" - - name: "" + - name: "ATP:dUMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -74141,7 +74165,7 @@ - confidence_score: 0 - !!omap - id: "MAR03999" - - name: "" + - name: "ADP phosphohydrolase" - metabolites: !!omap - MAM01285e: -1 - MAM01334e: 1 @@ -74160,7 +74184,7 @@ - confidence_score: 0 - !!omap - id: "MAR04024" - - name: "" + - name: "ATP:CMP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -74178,7 +74202,7 @@ - confidence_score: 0 - !!omap - id: "MAR04026" - - name: "" + - name: "ATP:CMP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -74196,7 +74220,7 @@ - confidence_score: 0 - !!omap - id: "MAR04054" - - name: "" + - name: "ATP:thymidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -74215,7 +74239,7 @@ - confidence_score: 0 - !!omap - id: "MAR04061" - - name: "" + - name: "UTP phosphohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -74234,7 +74258,7 @@ - confidence_score: 0 - !!omap - id: "MAR04083" - - name: "" + - name: "ATP:adenosine 5'-phosphotransferase" - metabolites: !!omap - MAM01280m: -1 - MAM01285m: 1 @@ -74253,7 +74277,7 @@ - confidence_score: 0 - !!omap - id: "MAR04136" - - name: "" + - name: "GTP phosphohydrolase" - metabolites: !!omap - MAM01948e: 1 - MAM02034e: -1 @@ -74272,7 +74296,7 @@ - confidence_score: 0 - !!omap - id: "MAR04180" - - name: "" + - name: "ATP:cytidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -74291,7 +74315,7 @@ - confidence_score: 0 - !!omap - id: "MAR04185" - - name: "" + - name: "ATP:sulfate adenylyltransferase" - metabolites: !!omap - MAM01283c: 1 - MAM01371c: -1 @@ -74310,7 +74334,7 @@ - confidence_score: 0 - !!omap - id: "MAR04186" - - name: "" + - name: "ATP:adenylylsulfate 3'-phosphotransferase" - metabolites: !!omap - MAM01283c: -1 - MAM01285c: 1 @@ -74329,7 +74353,7 @@ - confidence_score: 0 - !!omap - id: "MAR04342" - - name: "" + - name: "IDP phosphohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -74348,7 +74372,7 @@ - confidence_score: 0 - !!omap - id: "MAR04344" - - name: "" + - name: "5,6-dihydrouracil:NAD+ oxidoreductase" - metabolites: !!omap - MAM01052c: -1 - MAM02039c: 1 @@ -74367,7 +74391,7 @@ - confidence_score: 0 - !!omap - id: "MAR04483" - - name: "" + - name: "ATP:thymidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -74386,7 +74410,7 @@ - confidence_score: 0 - !!omap - id: "MAR04507" - - name: "" + - name: "dCMP aminohydrolase" - metabolites: !!omap - MAM01644c: -1 - MAM01755c: 1 @@ -74404,7 +74428,7 @@ - confidence_score: 0 - !!omap - id: "MAR04516" - - name: "" + - name: "dCDP nucleotidohydrolase" - metabolites: !!omap - MAM01643c: -1 - MAM01644c: 1 @@ -74423,7 +74447,7 @@ - confidence_score: 0 - !!omap - id: "MAR04601" - - name: "" + - name: "ATP:deoxyguanosine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -74442,7 +74466,7 @@ - confidence_score: 0 - !!omap - id: "MAR04633" - - name: "" + - name: "ATP:deoxyadenosine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -74461,7 +74485,7 @@ - confidence_score: 0 - !!omap - id: "MAR04640" - - name: "" + - name: "ATP:dUMP phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -74479,7 +74503,7 @@ - confidence_score: 0 - !!omap - id: "MAR04641" - - name: "" + - name: "ATP:deoxyuridine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -74498,7 +74522,7 @@ - confidence_score: 0 - !!omap - id: "MAR04680" - - name: "" + - name: "deoxyuridine:orthophosphate 2-deoxy-D-ribosyltransferase" - metabolites: !!omap - MAM00639c: -1 - MAM01673c: 1 @@ -74516,7 +74540,7 @@ - confidence_score: 0 - !!omap - id: "MAR04806" - - name: "" + - name: "10-formyltetrahydrofolate:5'-phosphoribosylglycinamide formyltransferase" - metabolites: !!omap - MAM00266c: -1 - MAM01940c: -1 @@ -74535,7 +74559,7 @@ - confidence_score: 0 - !!omap - id: "MAR05394" - - name: "" + - name: "Guanosine aminohydrolase" - metabolites: !!omap - MAM02038c: -1 - MAM02040c: -1 @@ -74553,7 +74577,7 @@ - confidence_score: 0 - !!omap - id: "MAR06625" - - name: "" + - name: "ATP:deoxyuridine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -74572,7 +74596,7 @@ - confidence_score: 0 - !!omap - id: "MAR06626" - - name: "" + - name: "2'-deoxyuridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01673m: 1 - MAM01755m: -1 @@ -74590,14 +74614,14 @@ - confidence_score: 0 - !!omap - id: "MAR07160" - - name: "" + - name: "Deoxynucleoside triphosphate:DNA deoxynucleotidyltransferase" - metabolites: !!omap - - MAM01642c: -0.3 - - MAM01645c: -0.2 - - MAM01688c: -0.2 - - MAM01721c: 1 - - MAM01753c: -0.3 - - MAM02759c: 1 + - MAM01642n: -0.3 + - MAM01645n: -0.2 + - MAM01688n: -0.2 + - MAM01721n: 1 + - MAM01753n: -0.3 + - MAM02759n: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(ENSG00000115350 and ENSG00000148229) or (ENSG00000062822 and ENSG00000077514 and ENSG00000106628 and ENSG00000175482) or (ENSG00000014138 and ENSG00000101868) or (ENSG00000014138 and ENSG00000062822 and ENSG00000077514 and ENSG00000100479 and ENSG00000101868 and ENSG00000106628 and ENSG00000115350 and ENSG00000148229 and ENSG00000175482 and ENSG00000177084) or ENSG00000009413 or ENSG00000051341 or ENSG00000070501 or ENSG00000101751 or ENSG00000111445 or ENSG00000112941 or ENSG00000122008 or ENSG00000122678 or ENSG00000130997 or ENSG00000132382 or ENSG00000140521 or ENSG00000166169 or ENSG00000170734 or ENSG00000256525" @@ -74610,14 +74634,14 @@ - confidence_score: 0 - !!omap - id: "MAR07161" - - name: "" + - name: "nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed)" - metabolites: !!omap - - MAM01371c: -0.18 - - MAM01623c: -0.3 - - MAM02034c: -0.34 - - MAM02759c: 1 - - MAM02847c: 1 - - MAM03130c: -0.18 + - MAM01371n: -0.18 + - MAM01623n: -0.3 + - MAM02034n: -0.34 + - MAM02759n: 1 + - MAM02847n: 1 + - MAM03130n: -0.18 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(ENSG00000113356 or ENSG00000121851) and (ENSG00000090060 or ENSG00000115421 or ENSG00000164329 or ENSG00000218823) and (ENSG00000083223 or ENSG00000134744 or ENSG00000149016) and ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184" @@ -74632,12 +74656,12 @@ - id: "MAR07162" - name: "" - metabolites: !!omap - - MAM01285c: -0.18 - - MAM01424c: -0.3 - - MAM01948c: -0.34 - - MAM02751c: 1 - - MAM02847c: 1 - - MAM03106c: -0.18 + - MAM01285c: 0.18 + - MAM01424c: 0.3 + - MAM01948c: 0.34 + - MAM02751c: -1 + - MAM02847c: -1 + - MAM03106c: 0.18 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(ENSG00000113356 or ENSG00000121851) and (ENSG00000090060 or ENSG00000115421 or ENSG00000164329 or ENSG00000218823) and (ENSG00000083223 or ENSG00000134744 or ENSG00000149016) and ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184" @@ -74652,13 +74676,13 @@ - id: "MAR07163" - name: "" - metabolites: !!omap - - MAM01639c: 0.3 - - MAM01644c: 0.2 - - MAM01686c: 0.2 - - MAM01721c: -1 - - MAM01752c: 0.3 - - MAM02039c: 1 - - MAM02040c: -1 + - MAM01639n: 0.3 + - MAM01644n: 0.2 + - MAM01686n: 0.2 + - MAM01721n: -1 + - MAM01752n: 0.3 + - MAM02039n: 1 + - MAM02040n: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(ENSG00000113456 and ENSG00000172613) or ENSG00000164053 or ENSG00000183479 or ENSG00000213689" @@ -74692,7 +74716,7 @@ - confidence_score: 0 - !!omap - id: "MAR07713" - - name: "" + - name: "adenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01280l: 1 - MAM01334l: -1 @@ -74710,7 +74734,7 @@ - confidence_score: 0 - !!omap - id: "MAR07716" - - name: "" + - name: "uridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040l: -1 - MAM02751l: 1 @@ -74728,7 +74752,7 @@ - confidence_score: 0 - !!omap - id: "MAR07717" - - name: "" + - name: "uridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040m: -1 - MAM02751m: 1 @@ -74746,7 +74770,7 @@ - confidence_score: 0 - !!omap - id: "MAR07721" - - name: "" + - name: "cytidine-5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01590l: -1 - MAM01630l: 1 @@ -74764,7 +74788,7 @@ - confidence_score: 0 - !!omap - id: "MAR07725" - - name: "" + - name: "thymidylate 5'-phosphohydrolase" - metabolites: !!omap - MAM01752l: -1 - MAM02040l: -1 @@ -74782,7 +74806,7 @@ - confidence_score: 0 - !!omap - id: "MAR07728" - - name: "" + - name: "guanosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02016l: -1 - MAM02038l: 1 @@ -75067,7 +75091,7 @@ - confidence_score: 0 - !!omap - id: "MAR07875" - - name: "" + - name: "ATP:UMP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75085,7 +75109,7 @@ - confidence_score: 0 - !!omap - id: "MAR07876" - - name: "" + - name: "ATP:UMP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75103,7 +75127,7 @@ - confidence_score: 0 - !!omap - id: "MAR07878" - - name: "" + - name: "ATP:dIDP phosphotransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01371c: 1 @@ -75158,7 +75182,7 @@ - confidence_score: 0 - !!omap - id: "MAR07881" - - name: "" + - name: "ATP:dIDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75176,7 +75200,7 @@ - confidence_score: 0 - !!omap - id: "MAR07882" - - name: "" + - name: "ATP:GDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75194,7 +75218,7 @@ - confidence_score: 0 - !!omap - id: "MAR07883" - - name: "" + - name: "ATP:UDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75212,7 +75236,7 @@ - confidence_score: 0 - !!omap - id: "MAR07884" - - name: "" + - name: "ATP:UDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75230,7 +75254,7 @@ - confidence_score: 0 - !!omap - id: "MAR07885" - - name: "" + - name: "ATP:CDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75248,7 +75272,7 @@ - confidence_score: 0 - !!omap - id: "MAR07886" - - name: "" + - name: "ATP:dTDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75266,7 +75290,7 @@ - confidence_score: 0 - !!omap - id: "MAR07887" - - name: "" + - name: "ATP:dTDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75284,7 +75308,7 @@ - confidence_score: 0 - !!omap - id: "MAR07888" - - name: "" + - name: "ATP:dGDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75302,7 +75326,7 @@ - confidence_score: 0 - !!omap - id: "MAR07889" - - name: "" + - name: "ATP:dUDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75320,7 +75344,7 @@ - confidence_score: 0 - !!omap - id: "MAR07890" - - name: "" + - name: "ATP:dCDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75338,7 +75362,7 @@ - confidence_score: 0 - !!omap - id: "MAR07891" - - name: "" + - name: "ATP:dCDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75356,7 +75380,7 @@ - confidence_score: 0 - !!omap - id: "MAR07892" - - name: "" + - name: "ATP:dADP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75374,7 +75398,7 @@ - confidence_score: 0 - !!omap - id: "MAR07893" - - name: "" + - name: "ATP:IDP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75392,7 +75416,7 @@ - confidence_score: 0 - !!omap - id: "MAR07894" - - name: "" + - name: "ATP:dIDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75410,7 +75434,7 @@ - confidence_score: 0 - !!omap - id: "MAR07895" - - name: "" + - name: "ATP:IDP phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -75428,7 +75452,7 @@ - confidence_score: 0 - !!omap - id: "MAR08083" - - name: "" + - name: "Guanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase" - metabolites: !!omap - MAM01433n: -1 - MAM02016n: 1 @@ -75446,7 +75470,7 @@ - confidence_score: 0 - !!omap - id: "MAR08085" - - name: "" + - name: "Guanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase" - metabolites: !!omap - MAM01433g: -1 - MAM02016g: 1 @@ -75464,7 +75488,7 @@ - confidence_score: 0 - !!omap - id: "MAR08087" - - name: "" + - name: "adenosine 3',5'-phosphate 5'-nucleotidohydrolase" - metabolites: !!omap - MAM01334g: 1 - MAM01419g: -1 @@ -75482,7 +75506,7 @@ - confidence_score: 0 - !!omap - id: "MAR08443" - - name: "" + - name: "ADP-glucose glucose-1-phosphohydrolase" - metabolites: !!omap - MAM01286c: -1 - MAM01334c: 1 @@ -75501,7 +75525,7 @@ - confidence_score: 0 - !!omap - id: "MAR08444" - - name: "" + - name: "ADPmannose sugarphosphohydrolase" - metabolites: !!omap - MAM01287c: -1 - MAM01334c: 1 @@ -75520,7 +75544,7 @@ - confidence_score: 0 - !!omap - id: "MAR08445" - - name: "" + - name: "ATP:cytidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -75539,7 +75563,7 @@ - confidence_score: 0 - !!omap - id: "MAR08446" - - name: "" + - name: "Cytidine aminohydrolase" - metabolites: !!omap - MAM01630n: -1 - MAM02040n: -1 @@ -75735,7 +75759,7 @@ - confidence_score: 0 - !!omap - id: "MAR08458" - - name: "" + - name: "ATP:CMP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -75753,7 +75777,7 @@ - confidence_score: 0 - !!omap - id: "MAR08459" - - name: "" + - name: "ATP:dCMP phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -76003,7 +76027,7 @@ - confidence_score: 0 - !!omap - id: "MAR08473" - - name: "" + - name: "deoxyadenosine aminohydrolase" - metabolites: !!omap - MAM01666e: -1 - MAM01671e: 1 @@ -76021,7 +76045,7 @@ - confidence_score: 0 - !!omap - id: "MAR08474" - - name: "" + - name: "ATP diphosphohydrolase (phosphate-forming)" - metabolites: !!omap - MAM01334e: 1 - MAM01371e: -1 @@ -76040,7 +76064,7 @@ - confidence_score: 0 - !!omap - id: "MAR08477" - - name: "" + - name: "ATP:deoxycitidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -76059,7 +76083,7 @@ - confidence_score: 0 - !!omap - id: "MAR08478" - - name: "" + - name: "ATP:deoxycitidine 5'-phosphotransferase" - metabolites: !!omap - MAM01285n: -1 - MAM01371n: 1 @@ -76097,7 +76121,7 @@ - confidence_score: 0 - !!omap - id: "MAR08480" - - name: "" + - name: "deoxycytidine aminohydrolase" - metabolites: !!omap - MAM01668n: -1 - MAM01673n: 1 @@ -76133,7 +76157,7 @@ - confidence_score: 0 - !!omap - id: "MAR08482" - - name: "" + - name: "NADPH:oxidized-thioredoxin oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02554m: 1 @@ -76152,7 +76176,7 @@ - confidence_score: 0 - !!omap - id: "MAR08483" - - name: "" + - name: "dUTP nucleotidohydrolase" - metabolites: !!omap - MAM01755n: 1 - MAM01756n: -1 @@ -76171,7 +76195,7 @@ - confidence_score: 0 - !!omap - id: "MAR08484" - - name: "" + - name: "ATP:inosine 5'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -76190,7 +76214,7 @@ - confidence_score: 0 - !!omap - id: "MAR08485" - - name: "" + - name: "UDP phosphohydrolase" - metabolites: !!omap - MAM02039g: 1 - MAM02040g: -1 @@ -76209,7 +76233,7 @@ - confidence_score: 0 - !!omap - id: "MAR08486" - - name: "" + - name: "adenosine:phosphate alpha-D-ribosyltransferase" - metabolites: !!omap - MAM01279c: 1 - MAM01280c: -1 @@ -76227,7 +76251,7 @@ - confidence_score: 0 - !!omap - id: "MAR08487" - - name: "" + - name: "uridine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040e: -1 - MAM02751e: 1 @@ -76245,7 +76269,7 @@ - confidence_score: 0 - !!omap - id: "MAR08488" - - name: "" + - name: "XTP pyrophosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -76264,7 +76288,7 @@ - confidence_score: 0 - !!omap - id: "MAR08489" - - name: "" + - name: "Inosine 5'-triphosphate pyrophosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -76283,7 +76307,7 @@ - confidence_score: 0 - !!omap - id: "MAR08493" - - name: "" + - name: "2'-deoxycytidine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01644l: -1 - MAM01668l: 1 @@ -76301,7 +76325,7 @@ - confidence_score: 0 - !!omap - id: "MAR08494" - - name: "" + - name: "2'-deoxyadenosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01639l: -1 - MAM01666l: 1 @@ -76319,7 +76343,7 @@ - confidence_score: 0 - !!omap - id: "MAR08495" - - name: "" + - name: "2'-deoxyguanosine 5'-monophosphate phosphohydrolase" - metabolites: !!omap - MAM01669l: 1 - MAM01686l: -1 @@ -76337,7 +76361,7 @@ - confidence_score: 0 - !!omap - id: "MAR03802" - - name: "" + - name: "L-glutamate:NAD+ oxidoreductase (deaminating)" - metabolites: !!omap - MAM01306m: -1 - MAM01974m: 1 @@ -76358,7 +76382,7 @@ - confidence_score: 0 - !!omap - id: "MAR03804" - - name: "" + - name: "L-glutamate:NADP+ oxidoreductase (deaminating)" - metabolites: !!omap - MAM01306m: -1 - MAM01974m: 1 @@ -76379,7 +76403,7 @@ - confidence_score: 0 - !!omap - id: "MAR03811" - - name: "" + - name: "L-Citrulline:L-aspartate ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01366c: 1 @@ -76400,7 +76424,7 @@ - confidence_score: 0 - !!omap - id: "MAR03813" - - name: "" + - name: "2-(Nomega-L-arginino)succinate arginine-lyase (fumarate-forming)" - metabolites: !!omap - MAM01365c: -1 - MAM01366c: 1 @@ -76417,7 +76441,7 @@ - confidence_score: 0 - !!omap - id: "MAR03822" - - name: "" + - name: "(S)-1-pyrroline-5-carboxylate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00559m: -1 - MAM01974m: 1 @@ -76437,7 +76461,7 @@ - confidence_score: 0 - !!omap - id: "MAR03827" - - name: "" + - name: "L-Aspartate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306m: -1 - MAM01370m: -1 @@ -76455,7 +76479,7 @@ - confidence_score: 0 - !!omap - id: "MAR03829" - - name: "" + - name: "L-Aspartate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306c: -1 - MAM01370c: -1 @@ -76473,7 +76497,7 @@ - confidence_score: 0 - !!omap - id: "MAR03831" - - name: "" + - name: "L-aspartate ammonia-lyase (fumarate-forming)" - metabolites: !!omap - MAM01370c: -1 - MAM01862c: 1 @@ -76491,7 +76515,7 @@ - confidence_score: 0 - !!omap - id: "MAR03862" - - name: "" + - name: "L-asparagine amidohydrolase" - metabolites: !!omap - MAM01369m: -1 - MAM01370m: 1 @@ -76510,7 +76534,7 @@ - confidence_score: 0 - !!omap - id: "MAR03865" - - name: "" + - name: "3-sulfino-L-alanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00918m: -1 - MAM00919m: 1 @@ -76529,7 +76553,7 @@ - confidence_score: 0 - !!omap - id: "MAR03870" - - name: "" + - name: "glutathione:NADP+ oxidoreductase" - metabolites: !!omap - MAM02026m: 2 - MAM02027m: -1 @@ -76548,7 +76572,7 @@ - confidence_score: 0 - !!omap - id: "MAR03873" - - name: "" + - name: "Carbon-dioxide:ammonia ligase (ADP-forming,carbamate-phosphorylating)" - metabolites: !!omap - MAM01285m: 2 - MAM01371m: -2 @@ -76591,7 +76615,7 @@ - confidence_score: 0 - !!omap - id: "MAR03890" - - name: "" + - name: "L-Glutamate:ammonia ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -76611,7 +76635,7 @@ - confidence_score: 0 - !!omap - id: "MAR03892" - - name: "" + - name: "L-glutamine amidohydrolase" - metabolites: !!omap - MAM01974m: 1 - MAM01975m: -1 @@ -76630,7 +76654,7 @@ - confidence_score: 0 - !!omap - id: "MAR09802" - - name: "" + - name: "L-glutamine amidohydrolase" - metabolites: !!omap - MAM01974c: 1 - MAM01975c: -1 @@ -76649,7 +76673,7 @@ - confidence_score: 0 - !!omap - id: "MAR03899" - - name: "" + - name: "L-Alanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306c: -1 - MAM01307c: -1 @@ -76667,7 +76691,7 @@ - confidence_score: 0 - !!omap - id: "MAR03903" - - name: "" + - name: "L-aspartate:L-glutamine amido-ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01369c: 1 @@ -76690,7 +76714,7 @@ - confidence_score: 0 - !!omap - id: "MAR04109" - - name: "" + - name: "L-Alanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306m: -1 - MAM01307m: -1 @@ -76708,7 +76732,7 @@ - confidence_score: 0 - !!omap - id: "MAR04114" - - name: "" + - name: "2-oxoglutaramate amidohydrolase" - metabolites: !!omap - MAM00672c: -1 - MAM01306c: 1 @@ -76727,7 +76751,7 @@ - confidence_score: 0 - !!omap - id: "MAR04115" - - name: "" + - name: "2-oxoglutaramate amidohydrolase" - metabolites: !!omap - MAM00672m: -1 - MAM01306m: 1 @@ -76746,7 +76770,7 @@ - confidence_score: 0 - !!omap - id: "MAR04118" - - name: "" + - name: "glutathione:NADP+ oxidoreductase" - metabolites: !!omap - MAM02026c: 2 - MAM02027c: -1 @@ -76765,7 +76789,7 @@ - confidence_score: 0 - !!omap - id: "MAR04172" - - name: "" + - name: "L-asparagine amidohydrolase" - metabolites: !!omap - MAM01369c: -1 - MAM01370c: 1 @@ -76784,7 +76808,7 @@ - confidence_score: 0 - !!omap - id: "MAR04196" - - name: "" + - name: "L-Glutamine:pyruvate aminotransferase" - metabolites: !!omap - MAM00672c: 1 - MAM01307c: 1 @@ -76802,7 +76826,7 @@ - confidence_score: 0 - !!omap - id: "MAR04197" - - name: "" + - name: "L-Glutamine:pyruvate aminotransferase" - metabolites: !!omap - MAM00672m: 1 - MAM01307m: 1 @@ -76820,7 +76844,7 @@ - confidence_score: 0 - !!omap - id: "MAR04287" - - name: "" + - name: "succinate-semialdehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -76840,7 +76864,7 @@ - confidence_score: 0 - !!omap - id: "MAR04690" - - name: "" + - name: "L-glutamate 1-carboxy-lyase (4-aminobutanoate-forming)" - metabolites: !!omap - MAM00970c: 1 - MAM01596c: 1 @@ -76858,7 +76882,7 @@ - confidence_score: 0 - !!omap - id: "MAR04693" - - name: "" + - name: "4-aminobutanoate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00970m: -1 - MAM01306m: -1 @@ -76876,7 +76900,7 @@ - confidence_score: 0 - !!omap - id: "MAR06780" - - name: "" + - name: "L-tyrosine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01005m: 1 - MAM01306m: -1 @@ -76983,7 +77007,7 @@ - confidence_score: 0 - !!omap - id: "MAR07641" - - name: "" + - name: "D-Aspartate:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01641x: -1 - MAM02039x: 1 @@ -77004,7 +77028,7 @@ - confidence_score: 0 - !!omap - id: "MAR07642" - - name: "" + - name: "alanine racemase" - metabolites: !!omap - MAM01307c: 1 - MAM01638c: -1 @@ -77020,7 +77044,7 @@ - confidence_score: 0 - !!omap - id: "MAR08626" - - name: "" + - name: "acetyl-CoA:L-aspartate N-acetyltransferase" - metabolites: !!omap - MAM01261m: -1 - MAM01370m: -1 @@ -77039,7 +77063,7 @@ - confidence_score: 0 - !!omap - id: "MAR08628" - - name: "" + - name: "N-Acetyl-L-aspartate amidohydrolase" - metabolites: !!omap - MAM01252c: 1 - MAM01370c: 1 @@ -77057,7 +77081,7 @@ - confidence_score: 0 - !!omap - id: "MAR03806" - - name: "" + - name: "L-glutamate gamma-semialdehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01974m: -1 - MAM02039m: -2 @@ -77077,7 +77101,7 @@ - confidence_score: 0 - !!omap - id: "MAR03807" - - name: "" + - name: "L-Ornithine:2-oxo-acid aminotransferase" - metabolites: !!omap - MAM01306m: -1 - MAM01974m: 1 @@ -77095,7 +77119,7 @@ - confidence_score: 0 - !!omap - id: "MAR03809" - - name: "" + - name: "Carbamoyl-phosphate:L-ornithine carbamoyltransferase" - metabolites: !!omap - MAM01420m: 1 - MAM01588m: -1 @@ -77114,7 +77138,7 @@ - confidence_score: 0 - !!omap - id: "MAR03816" - - name: "" + - name: "L-Arginine amidinohydrolase" - metabolites: !!omap - MAM01365c: -1 - MAM02040c: -1 @@ -77168,7 +77192,7 @@ - confidence_score: 0 - !!omap - id: "MAR03832" - - name: "" + - name: "L-Arginine iminohydrolase" - metabolites: !!omap - MAM01365c: -1 - MAM01588c: 1 @@ -77187,7 +77211,7 @@ - confidence_score: 0 - !!omap - id: "MAR03833" - - name: "" + - name: "L-Proline:NADP+ 5-oxidoreductase" - metabolites: !!omap - MAM00559c: -1 - MAM02039c: -2 @@ -77206,7 +77230,7 @@ - confidence_score: 0 - !!omap - id: "MAR03835" - - name: "" + - name: "L-Proline:NAD+ 5-oxidoreductase" - metabolites: !!omap - MAM00559c: -1 - MAM02039c: -2 @@ -77225,7 +77249,7 @@ - confidence_score: 0 - !!omap - id: "MAR03837" - - name: "" + - name: "L-Proline:NAD+ 5-oxidoreductase" - metabolites: !!omap - MAM00559m: -1 - MAM02039m: -2 @@ -77263,7 +77287,7 @@ - confidence_score: 0 - !!omap - id: "MAR03895" - - name: "" + - name: "ATP:L-glutamate 5-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -77281,7 +77305,7 @@ - confidence_score: 0 - !!omap - id: "MAR03897" - - name: "" + - name: "L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)" - metabolites: !!omap - MAM01976m: -1 - MAM02039m: -1 @@ -77301,7 +77325,7 @@ - confidence_score: 0 - !!omap - id: "MAR03956" - - name: "" + - name: "carbonate hydro-lyase (carbon-dioxide-forming)" - metabolites: !!omap - MAM01596m: -1 - MAM02039m: 1 @@ -77319,7 +77343,7 @@ - confidence_score: 0 - !!omap - id: "MAR03993" - - name: "" + - name: "N-(omega)-Hydroxyarginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming)" - metabolites: !!omap - MAM01588c: 2 - MAM02039c: 1 @@ -77341,7 +77365,7 @@ - confidence_score: 0 - !!omap - id: "MAR04073" - - name: "" + - name: "S-adenosyl-L-methionine carboxy-lyase [S-adenosyl 3-(methylsulfanyl)propylamine-forming]" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -77359,7 +77383,7 @@ - confidence_score: 0 - !!omap - id: "MAR04075" - - name: "" + - name: "S-adenosylmethioninamine:putrescine 3-aminopropyltransferase" - metabolites: !!omap - MAM01116c: 1 - MAM02039c: 1 @@ -77378,7 +77402,7 @@ - confidence_score: 0 - !!omap - id: "MAR04077" - - name: "" + - name: "S-adenosylmethioninamine:spermidine 3-aminopropyltransferase" - metabolites: !!omap - MAM01116c: 1 - MAM02039c: 1 @@ -77397,7 +77421,7 @@ - confidence_score: 0 - !!omap - id: "MAR04190" - - name: "" + - name: "L-arginine,NADPH:oxygen oxidoreductase (N-(omega)-hydroxyarginine-forming)" - metabolites: !!omap - MAM01365c: -1 - MAM02039c: -1 @@ -77418,7 +77442,7 @@ - confidence_score: 0 - !!omap - id: "MAR04191" - - name: "" + - name: "L-arginine carboxy-lyase (agmatine-forming)" - metabolites: !!omap - MAM01303m: 1 - MAM01365m: -1 @@ -77436,7 +77460,7 @@ - confidence_score: 0 - !!omap - id: "MAR04212" - - name: "" + - name: "L-ornithine carboxy-lyase (putrescine-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -77454,7 +77478,7 @@ - confidence_score: 0 - !!omap - id: "MAR04422" - - name: "" + - name: "L-ornithine carboxy-lyase (putrescine-forming)" - metabolites: !!omap - MAM01596e: 1 - MAM02039e: -1 @@ -77472,7 +77496,7 @@ - confidence_score: 0 - !!omap - id: "MAR04423" - - name: "" + - name: "Putrescine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM00969e: 1 - MAM02039e: 1 @@ -77493,7 +77517,7 @@ - confidence_score: 0 - !!omap - id: "MAR04424" - - name: "" + - name: "Agmatine amidinohydrolase" - metabolites: !!omap - MAM01303m: -1 - MAM02040m: -1 @@ -77511,7 +77535,7 @@ - confidence_score: 0 - !!omap - id: "MAR04583" - - name: "" + - name: "S-Adenosyl-L-methionine:guanidinoacetate N-methyltransferase" - metabolites: !!omap - MAM01619c: -1 - MAM02036c: 1 @@ -77530,7 +77554,7 @@ - confidence_score: 0 - !!omap - id: "MAR04605" - - name: "" + - name: "4-Aminobutyraldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00969m: -1 - MAM00970m: 1 @@ -77589,7 +77613,7 @@ - confidence_score: 0 - !!omap - id: "MAR04776" - - name: "" + - name: "L-Proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating)" - metabolites: !!omap - MAM01306c: -1 - MAM01596c: 1 @@ -77609,7 +77633,7 @@ - confidence_score: 0 - !!omap - id: "MAR04777" - - name: "" + - name: "L-Proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating)" - metabolites: !!omap - MAM01306m: -1 - MAM01596m: 1 @@ -77629,7 +77653,7 @@ - confidence_score: 0 - !!omap - id: "MAR04778" - - name: "" + - name: "trans-4-Hydroxy-L-proline:NAD+ 5-oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02320c: 1 @@ -77648,7 +77672,7 @@ - confidence_score: 0 - !!omap - id: "MAR04779" - - name: "" + - name: "trans-4-Hydroxy-L-proline:NAD+ 5-oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02320m: 1 @@ -77667,7 +77691,7 @@ - confidence_score: 0 - !!omap - id: "MAR04780" - - name: "" + - name: "trans-4-Hydroxy-L-proline:NADP+ 5-oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02320c: 1 @@ -77686,7 +77710,7 @@ - confidence_score: 0 - !!omap - id: "MAR04781" - - name: "" + - name: "trans-4-Hydroxy-L-proline:NADP+ 5-oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02320m: 1 @@ -77705,7 +77729,7 @@ - confidence_score: 0 - !!omap - id: "MAR04784" - - name: "" + - name: "L-1-pyrroline-3-hydroxy-5-carboxylate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 1 - MAM02040m: -2 @@ -77725,7 +77749,7 @@ - confidence_score: 0 - !!omap - id: "MAR04785" - - name: "" + - name: "L-1-pyrroline-3-hydroxy-5-carboxylate:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039m: 1 - MAM02040m: -2 @@ -77745,7 +77769,7 @@ - confidence_score: 0 - !!omap - id: "MAR04786" - - name: "" + - name: "L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00989m: 1 - MAM01306m: -1 @@ -77763,7 +77787,7 @@ - confidence_score: 0 - !!omap - id: "MAR04787" - - name: "" + - name: "4-hydroxy-2-oxoglutarate glyoxylate-lyase (pyruvate-forming)" - metabolites: !!omap - MAM00989m: -1 - MAM02007m: 1 @@ -77780,7 +77804,7 @@ - confidence_score: 0 - !!omap - id: "MAR05384" - - name: "" + - name: "S-methyl-5'-thioadenosine:phosphate S-methyl-5-thio-alpha-D-ribosyl-transferase" - metabolites: !!omap - MAM01116c: -1 - MAM01279c: 1 @@ -78366,7 +78390,7 @@ - confidence_score: 0 - !!omap - id: "MAR06958" - - name: "" + - name: "N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250c: 1 - MAM02040c: -1 @@ -78386,7 +78410,7 @@ - confidence_score: 0 - !!omap - id: "MAR06959" - - name: "" + - name: "N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250x: 1 - MAM02040x: -1 @@ -78425,7 +78449,7 @@ - confidence_score: 0 - !!omap - id: "MAR06961" - - name: "" + - name: "N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250c: 1 - MAM02040c: -1 @@ -78445,7 +78469,7 @@ - confidence_score: 0 - !!omap - id: "MAR06962" - - name: "" + - name: "N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250x: 1 - MAM02040x: -1 @@ -78505,7 +78529,7 @@ - confidence_score: 0 - !!omap - id: "MAR06965" - - name: "" + - name: "spermidine:NAD+ oxidoreductase" - metabolites: !!omap - MAM01661c: -1 - MAM02039c: -1 @@ -78597,7 +78621,7 @@ - confidence_score: 0 - !!omap - id: "MAR08097" - - name: "" + - name: "L-erythro-4-Hydroxyglutamate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: -2 - MAM02040m: 1 @@ -78617,7 +78641,7 @@ - confidence_score: 0 - !!omap - id: "MAR08098" - - name: "" + - name: "D-aspartate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00989m: 1 - MAM01370m: 1 @@ -78635,7 +78659,7 @@ - confidence_score: 0 - !!omap - id: "MAR08416" - - name: "" + - name: "acetyl-CoA:L-glutamate N-acetyltransferase" - metabolites: !!omap - MAM01261m: -1 - MAM01597m: 1 @@ -78654,7 +78678,7 @@ - confidence_score: 0 - !!omap - id: "MAR08425" - - name: "" + - name: "N2-Acetyl-L-ornithine amidohydrolase" - metabolites: !!omap - MAM01252c: 1 - MAM02040c: -1 @@ -78672,7 +78696,7 @@ - confidence_score: 0 - !!omap - id: "MAR08426" - - name: "" + - name: "L-Arginine amidinohydrolase" - metabolites: !!omap - MAM01365m: -1 - MAM02040m: -1 @@ -78746,7 +78770,7 @@ - confidence_score: 0 - !!omap - id: "MAR08603" - - name: "" + - name: "acetyl-CoA:putrescine N-acetyltransferase" - metabolites: !!omap - MAM01261c: -1 - MAM01597c: 1 @@ -78765,7 +78789,7 @@ - confidence_score: 0 - !!omap - id: "MAR08604" - - name: "" + - name: "N-Acetylputrescine:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -78786,7 +78810,7 @@ - confidence_score: 0 - !!omap - id: "MAR08605" - - name: "" + - name: "N4-Acetylaminobutanal:NAD+ oxidoreductase" - metabolites: !!omap - MAM00952c: 1 - MAM02039c: 2 @@ -78806,7 +78830,7 @@ - confidence_score: 0 - !!omap - id: "MAR08606" - - name: "" + - name: "Putrescine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM00969c: 1 - MAM02039c: 1 @@ -78846,7 +78870,7 @@ - confidence_score: 0 - !!omap - id: "MAR08608" - - name: "" + - name: "D-Proline:oxygen oxidoreductase" - metabolites: !!omap - MAM00558c: 1 - MAM01742c: -1 @@ -78865,7 +78889,7 @@ - confidence_score: 0 - !!omap - id: "MAR08609" - - name: "" + - name: "L-Proline:NADP+ 5-oxidoreductase" - metabolites: !!omap - MAM00559m: -1 - MAM02039m: -2 @@ -78884,7 +78908,7 @@ - confidence_score: 0 - !!omap - id: "MAR08610" - - name: "" + - name: "L-proline:(acceptor) oxidoreductase" - metabolites: !!omap - MAM00559c: 1 - MAM01802c: -1 @@ -78903,7 +78927,7 @@ - confidence_score: 0 - !!omap - id: "MAR08611" - - name: "" + - name: "L-proline:(acceptor) oxidoreductase" - metabolites: !!omap - MAM00559m: 1 - MAM01802m: -1 @@ -78922,7 +78946,7 @@ - confidence_score: 0 - !!omap - id: "MAR04285" - - name: "" + - name: "succinate-semialdehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -78942,7 +78966,7 @@ - confidence_score: 0 - !!omap - id: "MAR00457" - - name: "" + - name: "ATP:(R)-glycerate 3-phosphotransferase" - metabolites: !!omap - MAM00913c: 1 - MAM01285c: 1 @@ -78961,7 +78985,7 @@ - confidence_score: 0 - !!omap - id: "MAR00460" - - name: "" + - name: "ATP:(R)-glycerate 3-phosphotransferase" - metabolites: !!omap - MAM00913m: 1 - MAM01285m: 1 @@ -79017,7 +79041,7 @@ - confidence_score: 0 - !!omap - id: "MAR03770" - - name: "" + - name: "3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00826m: -1 - MAM01802m: 1 @@ -79129,7 +79153,7 @@ - confidence_score: 0 - !!omap - id: "MAR03839" - - name: "" + - name: "3-Phospho-D-glycerate:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM00913c: -1 - MAM00914c: 1 @@ -79148,7 +79172,7 @@ - confidence_score: 0 - !!omap - id: "MAR03841" - - name: "" + - name: "3-Phosphoserine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00914c: -1 - MAM00916c: 1 @@ -79166,7 +79190,7 @@ - confidence_score: 0 - !!omap - id: "MAR03843" - - name: "" + - name: "O-phospho-L-serine phosphohydrolase" - metabolites: !!omap - MAM00916c: -1 - MAM02040c: -1 @@ -79184,7 +79208,7 @@ - confidence_score: 0 - !!omap - id: "MAR03845" - - name: "" + - name: "5,10-Methylenetetrahydrofolate:glycine hydroxymethyltransferase" - metabolites: !!omap - MAM01045c: 1 - MAM01986c: 1 @@ -79203,7 +79227,7 @@ - confidence_score: 0 - !!omap - id: "MAR03847" - - name: "" + - name: "Acetyl-CoA:glycine C-acetyltransferase" - metabolites: !!omap - MAM01261m: 1 - MAM01597m: -1 @@ -79221,7 +79245,7 @@ - confidence_score: 0 - !!omap - id: "MAR03849" - - name: "" + - name: "sarcosine:oxygen oxidoreductase (demethylating)" - metabolites: !!omap - MAM01831x: 1 - MAM01986x: 1 @@ -79241,7 +79265,7 @@ - confidence_score: 0 - !!omap - id: "MAR03852" - - name: "" + - name: "aminoacetone:oxygen oxidoreductase(deaminating)" - metabolites: !!omap - MAM01332c: -1 - MAM02039c: 1 @@ -79262,7 +79286,7 @@ - confidence_score: 0 - !!omap - id: "MAR03856" - - name: "" + - name: "(R)-Lactaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01715c: 1 - MAM02039c: -1 @@ -79299,7 +79323,7 @@ - confidence_score: 0 - !!omap - id: "MAR03883" - - name: "" + - name: "L-serine ammonia-lyase" - metabolites: !!omap - MAM02039c: 1 - MAM02578c: 1 @@ -79317,7 +79341,7 @@ - confidence_score: 0 - !!omap - id: "MAR03901" - - name: "" + - name: "S-Adenosyl-L-methionine:glycine N-methyltransferase" - metabolites: !!omap - MAM01986c: -1 - MAM02039c: 1 @@ -79354,7 +79378,7 @@ - confidence_score: 0 - !!omap - id: "MAR03974" - - name: "" + - name: "2-aminoacrylate aminohydrolase" - metabolites: !!omap - MAM01654c: -1 - MAM02039c: 1 @@ -79373,7 +79397,7 @@ - confidence_score: 0 - !!omap - id: "MAR04198" - - name: "" + - name: "L-Serine:pyruvate aminotransferase" - metabolites: !!omap - MAM01307c: 1 - MAM02154c: 1 @@ -79409,7 +79433,7 @@ - confidence_score: 0 - !!omap - id: "MAR04200" - - name: "" + - name: "L-serine hydro-lyase" - metabolites: !!omap - MAM01654c: 1 - MAM02040c: 1 @@ -79426,7 +79450,7 @@ - confidence_score: 0 - !!omap - id: "MAR04284" - - name: "" + - name: "L-threonine acetaldehyde-lyase (glycine-forming)" - metabolites: !!omap - MAM01249c: 1 - MAM01986c: 1 @@ -79443,7 +79467,7 @@ - confidence_score: 0 - !!omap - id: "MAR04348" - - name: "" + - name: "L-threonine ammonia-lyase (2-oxobutanoate-forming)" - metabolites: !!omap - MAM00671c: 1 - MAM02039c: 1 @@ -79461,7 +79485,7 @@ - confidence_score: 0 - !!omap - id: "MAR04466" - - name: "" + - name: "hydroxypyruvate aldose-ketose-isomerase" - metabolites: !!omap - MAM00646c: 1 - MAM02154c: -1 @@ -79477,7 +79501,7 @@ - confidence_score: 0 - !!omap - id: "MAR04467" - - name: "" + - name: "L-Serine:pyruvate aminotransferase" - metabolites: !!omap - MAM01307x: 1 - MAM02154x: 1 @@ -79495,7 +79519,7 @@ - confidence_score: 0 - !!omap - id: "MAR04582" - - name: "" + - name: "L-Arginine:glycine amidinotransferase" - metabolites: !!omap - MAM01365c: -1 - MAM01986c: -1 @@ -79551,7 +79575,7 @@ - confidence_score: 0 - !!omap - id: "MAR04697" - - name: "" + - name: "p-cumic alcohol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01393c: 1 - MAM01394c: -1 @@ -79571,7 +79595,7 @@ - confidence_score: 0 - !!omap - id: "MAR04698" - - name: "" + - name: "p-Cumic alcohol:NADP+ oxidoreductase" - metabolites: !!omap - MAM01393c: 1 - MAM01394c: -1 @@ -79591,7 +79615,7 @@ - confidence_score: 0 - !!omap - id: "MAR04699" - - name: "" + - name: "Trimethylaminoacetate:L-homosysteine S-methyltransferase" - metabolites: !!omap - MAM01393c: -1 - MAM01708c: 1 @@ -79609,7 +79633,7 @@ - confidence_score: 0 - !!omap - id: "MAR04700" - - name: "" + - name: "N,N-dimethylglycine,5,6,7,8-tetrahydrofolate:electron-transferflavoprotein oxidoreductase (demethylating,5,10-methylenetetrahydrofolate-forming)" - metabolites: !!omap - MAM01708c: 1 - MAM01831c: -1 @@ -79630,7 +79654,7 @@ - confidence_score: 0 - !!omap - id: "MAR04742" - - name: "" + - name: "succinyl-CoA:glycine C-succinyltransferase (decarboxylating)" - metabolites: !!omap - MAM01074m: 1 - MAM01596m: 1 @@ -79650,7 +79674,7 @@ - confidence_score: 0 - !!omap - id: "MAR04788" - - name: "" + - name: "L-Alanine:glyoxylate aminotransferase" - metabolites: !!omap - MAM01307m: -1 - MAM01986m: 1 @@ -79668,7 +79692,7 @@ - confidence_score: 0 - !!omap - id: "MAR04789" - - name: "" + - name: "glycine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01986x: -1 - MAM02007x: 1 @@ -79689,7 +79713,7 @@ - confidence_score: 0 - !!omap - id: "MAR04791" - - name: "" + - name: "L-Alanine:glyoxylate aminotransferase" - metabolites: !!omap - MAM01307x: -1 - MAM01986x: 1 @@ -79707,7 +79731,7 @@ - confidence_score: 0 - !!omap - id: "MAR04792" - - name: "" + - name: "5,10-Methylenetetrahydrofolate:glycine hydroxymethyltransferase" - metabolites: !!omap - MAM01045m: -1 - MAM01986m: -1 @@ -79744,7 +79768,7 @@ - confidence_score: 0 - !!omap - id: "MAR05392" - - name: "" + - name: "Tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 6 - MAM01371c: -6 @@ -79765,7 +79789,7 @@ - confidence_score: 0 - !!omap - id: "MAR05393" - - name: "" + - name: "tetrahydropteroyl-poly-gamma-glutamate gamma-glutamylhydrolase" - metabolites: !!omap - MAM01974c: 6 - MAM02040c: -6 @@ -79783,7 +79807,7 @@ - confidence_score: 0 - !!omap - id: "MAR06409" - - name: "" + - name: "Dihydrolipoamide:NAD+ oxidoreductase" - metabolites: !!omap - MAM01701m: 1 - MAM02039m: -1 @@ -79802,7 +79826,7 @@ - confidence_score: 0 - !!omap - id: "MAR07702" - - name: "" + - name: "glycolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01998c: 1 - MAM02007c: -1 @@ -79821,7 +79845,7 @@ - confidence_score: 0 - !!omap - id: "MAR07703" - - name: "" + - name: "glycolate:oxygen 2-oxidoreductase" - metabolites: !!omap - MAM01998c: -1 - MAM02007c: 1 @@ -79878,7 +79902,7 @@ - confidence_score: 0 - !!omap - id: "MAR08435" - - name: "" + - name: "glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)" - metabolites: !!omap - MAM01596m: 1 - MAM01986m: -1 @@ -79897,7 +79921,7 @@ - confidence_score: 0 - !!omap - id: "MAR08436" - - name: "" + - name: "[protein]-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming)" - metabolites: !!omap - MAM01045m: 1 - MAM01703m: 1 @@ -79917,7 +79941,7 @@ - confidence_score: 0 - !!omap - id: "MAR08437" - - name: "" + - name: "dihydrolipoylprotein:NAD+ oxidoreductase" - metabolites: !!omap - MAM01703m: 1 - MAM02039m: -1 @@ -79956,7 +79980,7 @@ - confidence_score: 0 - !!omap - id: "MAR08440" - - name: "" + - name: "p-cumic alcohol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01393m: 1 - MAM01394m: -1 @@ -80014,7 +80038,7 @@ - confidence_score: 0 - !!omap - id: "MAR09718" - - name: "" + - name: "ATP:L-homoserine O-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -80033,7 +80057,7 @@ - confidence_score: 0 - !!omap - id: "MAR09486" - - name: "" + - name: "O-phospho-L-homoserine phosphate-lyase (adding water" - metabolites: !!omap - MAM02040c: -1 - MAM02655c: -1 @@ -80070,7 +80094,7 @@ - confidence_score: 0 - !!omap - id: "MAR04428" - - name: "" + - name: "L-histidine carboxy-lyase (histamine-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -80088,7 +80112,7 @@ - confidence_score: 0 - !!omap - id: "MAR04429" - - name: "" + - name: "S-Adenosyl-L-methionine:histamine N-tele-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02124c: -1 @@ -80107,7 +80131,7 @@ - confidence_score: 0 - !!omap - id: "MAR04430" - - name: "" + - name: "N-methylhistamine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -80128,7 +80152,7 @@ - confidence_score: 0 - !!omap - id: "MAR04431" - - name: "" + - name: "3-Methylimidazole acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -80148,7 +80172,7 @@ - confidence_score: 0 - !!omap - id: "MAR04437" - - name: "" + - name: "L-histidine ammonia-lyase (urocanate-forming)" - metabolites: !!omap - MAM02039c: 1 - MAM02125c: -1 @@ -80166,7 +80190,7 @@ - confidence_score: 0 - !!omap - id: "MAR04658" - - name: "" + - name: "5-Formiminotetrahydrofolate:L-glutamate N-formiminotransferase" - metabolites: !!omap - MAM01099c: -1 - MAM01974c: -1 @@ -80185,7 +80209,7 @@ - confidence_score: 0 - !!omap - id: "MAR04660" - - name: "" + - name: "4-imidazolone-5-propanoate amidohydrolase" - metabolites: !!omap - MAM01009c: -1 - MAM02039c: 1 @@ -80203,7 +80227,7 @@ - confidence_score: 0 - !!omap - id: "MAR04712" - - name: "" + - name: "4,5-Dihydro-4-oxo-5-imidazolepropanoate hydro-lyase" - metabolites: !!omap - MAM01009c: 1 - MAM02040c: -1 @@ -80311,7 +80335,7 @@ - confidence_score: 0 - !!omap - id: "MAR08783" - - name: "" + - name: "1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) (copper-containing)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -80332,7 +80356,7 @@ - confidence_score: 0 - !!omap - id: "MAR08784" - - name: "" + - name: "Imidazole acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -80352,7 +80376,7 @@ - confidence_score: 0 - !!omap - id: "MAR08786" - - name: "" + - name: "Imidazole acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -80372,7 +80396,7 @@ - confidence_score: 0 - !!omap - id: "MAR04239" - - name: "" + - name: "2-oxoadipate dehydrogenase complex" - metabolites: !!omap - MAM00670m: -1 - MAM01596m: 1 @@ -80392,7 +80416,7 @@ - confidence_score: 0 - !!omap - id: "MAR04241" - - name: "" + - name: "S-Adenosyl-L-methionine:histone-L-lysine N6-methyltransferase" - metabolites: !!omap - MAM02039n: -1 - MAM02127n: 1 @@ -80411,7 +80435,7 @@ - confidence_score: 0 - !!omap - id: "MAR04288" - - name: "" + - name: "N6-(L-1,3-Dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)" - metabolites: !!omap - MAM01306m: -1 - MAM02039m: -1 @@ -80432,7 +80456,7 @@ - confidence_score: 0 - !!omap - id: "MAR04596" - - name: "" + - name: "L-2-aminoadipate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00670c: -1 - MAM01306c: 1 @@ -80450,7 +80474,7 @@ - confidence_score: 0 - !!omap - id: "MAR04597" - - name: "" + - name: "L-2-aminoadipate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00670m: -1 - MAM01306m: 1 @@ -80468,7 +80492,7 @@ - confidence_score: 0 - !!omap - id: "MAR04599" - - name: "" + - name: "2-Oxoadipate:lipoamde 2-oxidoreductase(decarboxylating and acceptor-succinylating)" - metabolites: !!omap - MAM00670m: -1 - MAM01596m: 1 @@ -80487,7 +80511,7 @@ - confidence_score: 0 - !!omap - id: "MAR04667" - - name: "" + - name: "N6-(L-1,3-Dicarboxypropyl)-L-lysine:NAD+ oxidoreductase" - metabolites: !!omap - MAM00631m: 1 - MAM01974m: 1 @@ -80508,7 +80532,7 @@ - confidence_score: 0 - !!omap - id: "MAR04668" - - name: "" + - name: "N6-(L-1,3-Dicarboxypropyl)-L-lysine:NADP+ oxidoreductase" - metabolites: !!omap - MAM00631m: 1 - MAM01974m: 1 @@ -80529,7 +80553,7 @@ - confidence_score: 0 - !!omap - id: "MAR04737" - - name: "" + - name: "L-2-aminoadipate-6-semialdehyde:NAD+ 6-oxidoreductase" - metabolites: !!omap - MAM00631c: -1 - MAM02039c: 2 @@ -80549,7 +80573,7 @@ - confidence_score: 0 - !!omap - id: "MAR04739" - - name: "" + - name: "L-2-aminoadipate-6-semialdehyde:NAD+ 6-oxidoreductase" - metabolites: !!omap - MAM00631m: -1 - MAM02039m: 2 @@ -80569,7 +80593,7 @@ - confidence_score: 0 - !!omap - id: "MAR04740" - - name: "" + - name: "(S)-2-amino-6-oxohexanoate hydro-lyase (spontaneous)" - metabolites: !!omap - MAM00556c: -1 - MAM00631c: 1 @@ -80587,7 +80611,7 @@ - confidence_score: 0 - !!omap - id: "MAR06415" - - name: "" + - name: "Glutaryl-CoA:dihydrolipoamide S-succinyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM01701m: 1 @@ -80642,7 +80666,7 @@ - confidence_score: 0 - !!omap - id: "MAR06976" - - name: "" + - name: "S-adenosyl-L-methionine:cytochrome-c-L-lysine N6-methyltransferase" - metabolites: !!omap - MAM00212c: 1 - MAM00213c: -1 @@ -80661,7 +80685,7 @@ - confidence_score: 0 - !!omap - id: "MAR06977" - - name: "" + - name: "S-adenosyl-L-methionine:cytochrome-c-L-lysine N6-methyltransferase" - metabolites: !!omap - MAM00211c: 1 - MAM00212c: -1 @@ -80699,7 +80723,7 @@ - confidence_score: 0 - !!omap - id: "MAR06979" - - name: "" + - name: "N6,N6,N6-Trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)" - metabolites: !!omap - MAM00789c: 1 - MAM01306c: -1 @@ -80737,7 +80761,7 @@ - confidence_score: 0 - !!omap - id: "MAR06981" - - name: "" + - name: "4-Trimethylammoniobutanal:NAD+ 1-oxidoreductase" - metabolites: !!omap - MAM01034c: -1 - MAM01922c: 1 @@ -80757,7 +80781,7 @@ - confidence_score: 0 - !!omap - id: "MAR06982" - - name: "" + - name: "4-Trimethylammoniobutanoate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)" - metabolites: !!omap - MAM01306c: -1 - MAM01596c: 1 @@ -80777,7 +80801,7 @@ - confidence_score: 0 - !!omap - id: "MAR06983" - - name: "" + - name: "[procollagen]-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)" - metabolites: !!omap - MAM00204c: -1 - MAM01306c: -1 @@ -80797,7 +80821,7 @@ - confidence_score: 0 - !!omap - id: "MAR06984" - - name: "" + - name: "UDP-alpha-D-galactose:procollagen-5-hydroxy-L-lysine D-galactosyltransferase" - metabolites: !!omap - MAM01036c: 1 - MAM02039c: 1 @@ -80816,7 +80840,7 @@ - confidence_score: 0 - !!omap - id: "MAR06985" - - name: "" + - name: "UDPglucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase" - metabolites: !!omap - MAM00232c: 1 - MAM01036c: -1 @@ -80835,7 +80859,7 @@ - confidence_score: 0 - !!omap - id: "MAR08017" - - name: "" + - name: "L-lysine:oxygen 2-oxidoreductase (deaminating)" - metabolites: !!omap - MAM01157x: 1 - MAM02039x: 1 @@ -80873,7 +80897,7 @@ - confidence_score: 0 - !!omap - id: "MAR08019" - - name: "" + - name: "L-pipecolate:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01663x: -1 - MAM02039x: -1 @@ -80892,7 +80916,7 @@ - confidence_score: 0 - !!omap - id: "MAR08021" - - name: "" + - name: "L-Pipecolate:oxygen 1,6-oxidoreductase" - metabolites: !!omap - MAM00556x: 1 - MAM02039x: 1 @@ -80949,7 +80973,7 @@ - confidence_score: 0 - !!omap - id: "MAR08027" - - name: "" + - name: "S-adenosyl-L-methionine:cytochrome-c-L-lysine N6-methyltransferase" - metabolites: !!omap - MAM00211n: 1 - MAM00212n: -1 @@ -80987,7 +81011,7 @@ - confidence_score: 0 - !!omap - id: "MAR03164" - - name: "" + - name: "(S)-3-hydroxybutanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00173m: 1 - MAM01622m: -1 @@ -81004,7 +81028,7 @@ - confidence_score: 0 - !!omap - id: "MAR03166" - - name: "" + - name: "(S)-3-Hydroxybutanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00173m: -1 - MAM01255m: 1 @@ -81023,7 +81047,7 @@ - confidence_score: 0 - !!omap - id: "MAR03885" - - name: "" + - name: "acetyl-CoA:acetyl-CoA C-acetyltransferase" - metabolites: !!omap - MAM01255m: -1 - MAM01261m: 2 @@ -81076,7 +81100,7 @@ - confidence_score: 0 - !!omap - id: "MAR08092" - - name: "" + - name: "3-Hydroxykynurenamine:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM00786c: -1 - MAM00949c: 1 @@ -81096,7 +81120,7 @@ - confidence_score: 0 - !!omap - id: "MAR08563" - - name: "" + - name: "Indole-3-acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -81172,7 +81196,7 @@ - confidence_score: 0 - !!omap - id: "MAR03935" - - name: "" + - name: "S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)" - metabolites: !!omap - MAM01831c: -1 - MAM02026c: -1 @@ -81189,7 +81213,7 @@ - confidence_score: 0 - !!omap - id: "MAR04681" - - name: "" + - name: "L-phenylalanine carboxy-lyase (phenylethylamine-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -81207,7 +81231,7 @@ - confidence_score: 0 - !!omap - id: "MAR04682" - - name: "" + - name: "Phenethylamine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -81228,7 +81252,7 @@ - confidence_score: 0 - !!omap - id: "MAR04683" - - name: "" + - name: "Phenylacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -81248,7 +81272,7 @@ - confidence_score: 0 - !!omap - id: "MAR04685" - - name: "" + - name: "Phenylacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -81268,7 +81292,7 @@ - confidence_score: 0 - !!omap - id: "MAR04686" - - name: "" + - name: "Aldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039c: -2 - MAM02040c: 1 @@ -81288,7 +81312,7 @@ - confidence_score: 0 - !!omap - id: "MAR04687" - - name: "" + - name: "Aldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039m: -2 - MAM02040m: 1 @@ -81329,7 +81353,7 @@ - confidence_score: 0 - !!omap - id: "MAR04703" - - name: "" + - name: "Gentisate aldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00576c: 1 - MAM01952c: -1 @@ -81369,7 +81393,7 @@ - confidence_score: 0 - !!omap - id: "MAR06988" - - name: "" + - name: "iodide:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02039c: -2 - MAM02040c: 2 @@ -81407,7 +81431,7 @@ - confidence_score: 0 - !!omap - id: "MAR07701" - - name: "" + - name: "NADPH:oxygen oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02041c: 1 @@ -81445,7 +81469,7 @@ - confidence_score: 0 - !!omap - id: "MAR08529" - - name: "" + - name: "methylamine:oxygen oxidoreductase (deaminating) (copper-containing)" - metabolites: !!omap - MAM01831c: 1 - MAM02039c: 1 @@ -81542,7 +81566,7 @@ - confidence_score: 0 - !!omap - id: "MAR08537" - - name: "" + - name: "L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase(3-hydroxylating)" - metabolites: !!omap - MAM00965c: 1 - MAM02354c: 1 @@ -81561,7 +81585,7 @@ - confidence_score: 0 - !!omap - id: "MAR08541" - - name: "" + - name: "1,2-benzenediol:oxygen oxidoreductase" - metabolites: !!omap - MAM02354c: 2 - MAM02630c: -1 @@ -81578,7 +81602,7 @@ - confidence_score: 0 - !!omap - id: "MAR08542" - - name: "" + - name: "3,4-dihydroxy-L-phenylalanine:oxygen oxidoreductase" - metabolites: !!omap - MAM02040c: 2 - MAM02354c: -2 @@ -81688,7 +81712,7 @@ - confidence_score: 0 - !!omap - id: "MAR09734" - - name: "" + - name: "5,6-dihydroxyindole:oxygen oxidoreductase" - metabolites: !!omap - MAM02040c: 2 - MAM02630c: -1 @@ -81706,7 +81730,7 @@ - confidence_score: 0 - !!omap - id: "MAR03206" - - name: "" + - name: "acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase" - metabolites: !!omap - MAM00662m: -1 - MAM01261m: 1 @@ -81724,7 +81748,7 @@ - confidence_score: 0 - !!omap - id: "MAR03208" - - name: "" + - name: "propanoyl-CoA:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -81763,7 +81787,7 @@ - confidence_score: 0 - !!omap - id: "MAR03213" - - name: "" + - name: "Methylmalonyl-CoA epimerase" - metabolites: !!omap - MAM00166m: 1 - MAM02480m: -1 @@ -81779,7 +81803,7 @@ - confidence_score: 0 - !!omap - id: "MAR03215" - - name: "" + - name: "(R)-Methylmalonyl-CoA CoA-carbonylmutase" - metabolites: !!omap - MAM00166m: -1 - MAM02944m: 1 @@ -81795,7 +81819,7 @@ - confidence_score: 0 - !!omap - id: "MAR03747" - - name: "" + - name: "L-Valine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00824c: 1 - MAM01306c: -1 @@ -81813,7 +81837,7 @@ - confidence_score: 0 - !!omap - id: "MAR03744" - - name: "" + - name: "L-Valine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00824m: 1 - MAM01306m: -1 @@ -81831,7 +81855,7 @@ - confidence_score: 0 - !!omap - id: "MAR03757" - - name: "" + - name: "3-Hydroxy-2-methylpropanoate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00661m: 1 - MAM00784m: -1 @@ -81870,7 +81894,7 @@ - confidence_score: 0 - !!omap - id: "MAR03777" - - name: "" + - name: "L-Leucine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00669c: 1 - MAM01306c: -1 @@ -81888,7 +81912,7 @@ - confidence_score: 0 - !!omap - id: "MAR03778" - - name: "" + - name: "L-Leucine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00669m: 1 - MAM01306m: -1 @@ -81906,7 +81930,7 @@ - confidence_score: 0 - !!omap - id: "MAR03795" - - name: "" + - name: "2-Methyl-3-oxopropanoate:NAD+ oxidoreductase (CoA-propanoylating)" - metabolites: !!omap - MAM00661m: -1 - MAM01596m: 1 @@ -81926,7 +81950,7 @@ - confidence_score: 0 - !!omap - id: "MAR04797" - - name: "" + - name: "(S)-Methylmalonate semialdehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00661c: -1 - MAM02039c: 2 @@ -81946,7 +81970,7 @@ - confidence_score: 0 - !!omap - id: "MAR06417" - - name: "" + - name: "2-methylpropanoyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-(2-methylpropanoyl)transferase" - metabolites: !!omap - MAM01597m: -1 - MAM01701m: 1 @@ -81964,7 +81988,7 @@ - confidence_score: 0 - !!omap - id: "MAR06419" - - name: "" + - name: "(S)-3-Methyl-2-oxopentanoate:[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating)" - metabolites: !!omap - MAM00669m: -1 - MAM01596m: 1 @@ -81983,7 +82007,7 @@ - confidence_score: 0 - !!omap - id: "MAR06420" - - name: "" + - name: "(S)-2-methylbutanoyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-(2-methylbutanoyl)transferase" - metabolites: !!omap - MAM00663m: 1 - MAM01597m: -1 @@ -82001,7 +82025,7 @@ - confidence_score: 0 - !!omap - id: "MAR06421" - - name: "" + - name: "4-methyl-2-oxopentanoate:[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating)" - metabolites: !!omap - MAM01013m: -1 - MAM01596m: 1 @@ -82020,7 +82044,7 @@ - confidence_score: 0 - !!omap - id: "MAR06422" - - name: "" + - name: "3-methylbutanoyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-(3-methylbutanoyl)transferase" - metabolites: !!omap - MAM01597m: -1 - MAM01701m: 1 @@ -82038,7 +82062,7 @@ - confidence_score: 0 - !!omap - id: "MAR06923" - - name: "" + - name: "L-Leucine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01013c: 1 - MAM01306c: -1 @@ -82056,7 +82080,7 @@ - confidence_score: 0 - !!omap - id: "MAR03765" - - name: "" + - name: "L-Leucine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01013m: 1 - MAM01306m: -1 @@ -82151,7 +82175,7 @@ - confidence_score: 0 - !!omap - id: "MAR08088" - - name: "" + - name: "L-3-amino-isobutanoate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00661m: -1 - MAM01306m: 1 @@ -82169,7 +82193,7 @@ - confidence_score: 0 - !!omap - id: "MAR08787" - - name: "" + - name: "(S)-methylmalonyl-CoA carboxy-lyase (propanoyl-CoA-forming)" - metabolites: !!omap - MAM01596m: 1 - MAM02039m: -1 @@ -82206,7 +82230,7 @@ - confidence_score: 0 - !!omap - id: "MAR03940" - - name: "" + - name: "L-Phenylalanine,tetrahydrobiopterin:oxygen oxidoreductase (4-hydroxylating)" - metabolites: !!omap - MAM01698c: 1 - MAM02040c: 1 @@ -82226,7 +82250,7 @@ - confidence_score: 0 - !!omap - id: "MAR04214" - - name: "" + - name: "L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)" - metabolites: !!omap - MAM02371c: 1 - MAM02630c: -1 @@ -82262,7 +82286,7 @@ - confidence_score: 0 - !!omap - id: "MAR04218" - - name: "" + - name: "Formylkynurenine hydrolase" - metabolites: !!omap - MAM01307c: 1 - MAM01835c: 1 @@ -82281,7 +82305,7 @@ - confidence_score: 0 - !!omap - id: "MAR04219" - - name: "" + - name: "N-Formylanthranilate amidohydrolase" - metabolites: !!omap - MAM01342c: 1 - MAM01833c: 1 @@ -82300,7 +82324,7 @@ - confidence_score: 0 - !!omap - id: "MAR04220" - - name: "" + - name: "L-Kynurenine,NADPH:oxygen oxidoreductase (3-hydroxylating)" - metabolites: !!omap - MAM00788c: -1 - MAM02039c: 1 @@ -82340,7 +82364,7 @@ - confidence_score: 0 - !!omap - id: "MAR04224" - - name: "" + - name: "L-Kynurenine hydrolase" - metabolites: !!omap - MAM01307c: 1 - MAM01342c: 1 @@ -82359,7 +82383,7 @@ - confidence_score: 0 - !!omap - id: "MAR04225" - - name: "" + - name: "3-Hydroxy-L-kynurenine hydrolase" - metabolites: !!omap - MAM00775c: 1 - MAM00788c: -1 @@ -82397,7 +82421,7 @@ - confidence_score: 0 - !!omap - id: "MAR04231" - - name: "" + - name: "2-Amino-3-carboxymuconate semialdehyde carboxy-lyase" - metabolites: !!omap - MAM00629c: -1 - MAM00633c: 1 @@ -82433,7 +82457,7 @@ - confidence_score: 0 - !!omap - id: "MAR04233" - - name: "" + - name: "2-Aminomuconate semialdehyde:NAD+ 6-oxidoreductase" - metabolites: !!omap - MAM00633c: -1 - MAM00634c: 1 @@ -82473,7 +82497,7 @@ - confidence_score: 0 - !!omap - id: "MAR04242" - - name: "" + - name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01596m: 1 - MAM01622m: 1 @@ -82493,7 +82517,7 @@ - confidence_score: 0 - !!omap - id: "MAR04243" - - name: "" + - name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01596m: 1 - MAM01622m: 1 @@ -82513,7 +82537,7 @@ - confidence_score: 0 - !!omap - id: "MAR04244" - - name: "" + - name: "3-hydroxy-L-kynurenine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00788c: -1 - MAM00924c: 1 @@ -82584,7 +82608,7 @@ - confidence_score: 0 - !!omap - id: "MAR06707" - - name: "" + - name: "L-tryptophan decarboxy-lyase" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -82656,7 +82680,7 @@ - confidence_score: 0 - !!omap - id: "MAR06711" - - name: "" + - name: "S-Adenosyl-L-methionine:amine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02605c: 1 @@ -82693,7 +82717,7 @@ - confidence_score: 0 - !!omap - id: "MAR06713" - - name: "" + - name: "Tryptamine:oxygen oxidoreductase(deaminating)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -82714,7 +82738,7 @@ - confidence_score: 0 - !!omap - id: "MAR06714" - - name: "" + - name: "Indole-3-acetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -82734,7 +82758,7 @@ - confidence_score: 0 - !!omap - id: "MAR06715" - - name: "" + - name: "S-adenosyl-L-methionine:(indol-3-yl)acetate O-methyltransferase" - metabolites: !!omap - MAM02169c: -1 - MAM02478c: 1 @@ -82752,7 +82776,7 @@ - confidence_score: 0 - !!omap - id: "MAR06716" - - name: "" + - name: "5-hydroxy-L-tryptophan:oxygen 2,3-dioxygenase (indole-decyclizing)" - metabolites: !!omap - MAM01107c: -1 - MAM01108c: 1 @@ -82769,7 +82793,7 @@ - confidence_score: 0 - !!omap - id: "MAR06717" - - name: "" + - name: "Aryl-formylamine amidohydrolase" - metabolites: !!omap - MAM01106c: 1 - MAM01108c: -1 @@ -82788,7 +82812,7 @@ - confidence_score: 0 - !!omap - id: "MAR06718" - - name: "" + - name: "5-Hydroxykynurenamine decarboxy-lyase" - metabolites: !!omap - MAM01105c: 1 - MAM01106c: -1 @@ -82806,7 +82830,7 @@ - confidence_score: 0 - !!omap - id: "MAR06719" - - name: "" + - name: "5-Hydroxykynurenamine:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM00947c: 1 - MAM01105c: -1 @@ -82901,7 +82925,7 @@ - confidence_score: 0 - !!omap - id: "MAR06725" - - name: "" + - name: "L-Phenylalanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306c: -1 - MAM01974c: 1 @@ -82919,7 +82943,7 @@ - confidence_score: 0 - !!omap - id: "MAR06726" - - name: "" + - name: "Phenylpyruvate:oxygen oxidoreductase (hydroxylating,decarboxylating)" - metabolites: !!omap - MAM00654c: 1 - MAM01596c: 1 @@ -82937,7 +82961,7 @@ - confidence_score: 0 - !!omap - id: "MAR06727" - - name: "" + - name: "Phenylpyruvate keto-enol-isomerase" - metabolites: !!omap - MAM00647c: 1 - MAM02725c: -1 @@ -82953,7 +82977,7 @@ - confidence_score: 0 - !!omap - id: "MAR06728" - - name: "" + - name: "L-Tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)" - metabolites: !!omap - MAM01698c: 1 - MAM02040c: 1 @@ -82973,7 +82997,7 @@ - confidence_score: 0 - !!omap - id: "MAR06729" - - name: "" + - name: "L-Tyrosine:oxygen oxidoreductase" - metabolites: !!omap - MAM02039c: -2 - MAM02040c: 1 @@ -83011,7 +83035,7 @@ - confidence_score: 0 - !!omap - id: "MAR06731" - - name: "" + - name: "3,4-Dihydroxy-L-phenylalanine carboxy-lyase" - metabolites: !!omap - MAM01596c: 1 - MAM01736c: 1 @@ -83159,7 +83183,7 @@ - confidence_score: 0 - !!omap - id: "MAR06741" - - name: "" + - name: "dopamine,ascorbate:oxygen oxidoreductase (beta-hydroxylating)" - metabolites: !!omap - MAM01368c: -1 - MAM01655c: 1 @@ -83197,7 +83221,7 @@ - confidence_score: 0 - !!omap - id: "MAR06743" - - name: "" + - name: "S-Adenosyl-L-methionine:phenylethanolamine N-methyltransferase" - metabolites: !!omap - MAM01290c: 1 - MAM02039c: 1 @@ -83235,7 +83259,7 @@ - confidence_score: 0 - !!omap - id: "MAR06745" - - name: "" + - name: "4-[(1R)-1-Hydroxy-2-(methylamino)ethyl]-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM00726c: 1 - MAM01290c: -1 @@ -83255,7 +83279,7 @@ - confidence_score: 0 - !!omap - id: "MAR06746" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM01290c: -1 - MAM02039c: 1 @@ -83274,7 +83298,7 @@ - confidence_score: 0 - !!omap - id: "MAR06747" - - name: "" + - name: "L-Metanephrine:oxygen oxidoreductase (deaminating) (flavin-containing)" - metabolites: !!omap - MAM00820c: 1 - MAM02040c: -1 @@ -83294,7 +83318,7 @@ - confidence_score: 0 - !!omap - id: "MAR06748" - - name: "" + - name: "3-Methoxy-4-hydroxyphenylglycolaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00820c: -1 - MAM02039c: 2 @@ -83314,7 +83338,7 @@ - confidence_score: 0 - !!omap - id: "MAR06749" - - name: "" + - name: "3-Methoxy-4-hydroxyphenylglycolaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM00820c: -1 - MAM02039c: 2 @@ -83334,7 +83358,7 @@ - confidence_score: 0 - !!omap - id: "MAR06750" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02617c: -1 @@ -83353,7 +83377,7 @@ - confidence_score: 0 - !!omap - id: "MAR06751" - - name: "" + - name: "L-Normetanephrine:oxygen oxidoreductase (deaminating) (copper-containing)" - metabolites: !!omap - MAM00820c: 1 - MAM02039c: 1 @@ -83374,7 +83398,7 @@ - confidence_score: 0 - !!omap - id: "MAR06752" - - name: "" + - name: "4-[(1R)-2-Amino-1-hydroxyethyl]-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM00726c: 1 - MAM02039c: 1 @@ -83395,7 +83419,7 @@ - confidence_score: 0 - !!omap - id: "MAR06753" - - name: "" + - name: "3,4-Dihydroxymandelaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00726c: -1 - MAM00727c: 1 @@ -83415,7 +83439,7 @@ - confidence_score: 0 - !!omap - id: "MAR06754" - - name: "" + - name: "3,4-Dihydroxymandelaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM00726c: -1 - MAM00727c: 1 @@ -83435,7 +83459,7 @@ - confidence_score: 0 - !!omap - id: "MAR06755" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM00727c: -1 - MAM02039c: 1 @@ -83454,7 +83478,7 @@ - confidence_score: 0 - !!omap - id: "MAR06756" - - name: "" + - name: "3,4-dihydroxyphenylethyleneglycol:NAD+ oxidoreductase" - metabolites: !!omap - MAM00726c: -1 - MAM00730c: 1 @@ -83473,7 +83497,7 @@ - confidence_score: 0 - !!omap - id: "MAR06757" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM00730c: -1 - MAM00819c: 1 @@ -83492,7 +83516,7 @@ - confidence_score: 0 - !!omap - id: "MAR06758" - - name: "" + - name: "4-(2-aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM00728c: 1 - MAM01736c: -1 @@ -83513,7 +83537,7 @@ - confidence_score: 0 - !!omap - id: "MAR06759" - - name: "" + - name: "3,4-Dihydroxyphenylacetaldehyde hydro-lyase (adding dopamine)" - metabolites: !!omap - MAM00728c: -1 - MAM01736c: -1 @@ -83531,7 +83555,7 @@ - confidence_score: 0 - !!omap - id: "MAR06760" - - name: "" + - name: "3,4-dihydroxyphenylacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00728c: -1 - MAM00729c: 1 @@ -83551,7 +83575,7 @@ - confidence_score: 0 - !!omap - id: "MAR06761" - - name: "" + - name: "3,4-Dihydroxyphenylacetaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM00728c: -1 - MAM00729c: 1 @@ -83571,7 +83595,7 @@ - confidence_score: 0 - !!omap - id: "MAR06762" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM00729c: -1 - MAM02039c: 1 @@ -83590,7 +83614,7 @@ - confidence_score: 0 - !!omap - id: "MAR06763" - - name: "" + - name: "S-Adenosyl-L-methionine:catechol O-methyltransferase" - metabolites: !!omap - MAM00821c: 1 - MAM01736c: -1 @@ -83609,7 +83633,7 @@ - confidence_score: 0 - !!omap - id: "MAR06764" - - name: "" + - name: "3-Methoxytyramine:oxygen oxidoreductase (deaminating) (copper-containing)" - metabolites: !!omap - MAM00818c: 1 - MAM00821c: -1 @@ -83648,7 +83672,7 @@ - confidence_score: 0 - !!omap - id: "MAR06766" - - name: "" + - name: "3-Methoxy-4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00818c: -1 - MAM02039c: 2 @@ -83668,7 +83692,7 @@ - confidence_score: 0 - !!omap - id: "MAR06767" - - name: "" + - name: "3-Methoxy-4-hydroxyphenylacetaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM00818c: -1 - MAM02039c: 2 @@ -83688,7 +83712,7 @@ - confidence_score: 0 - !!omap - id: "MAR06768" - - name: "" + - name: "L-tyrosine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01005c: 1 - MAM01306c: -1 @@ -83706,7 +83730,7 @@ - confidence_score: 0 - !!omap - id: "MAR06770" - - name: "" + - name: "L-Tyrosine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01005c: 1 - MAM02039c: 1 @@ -83727,7 +83751,7 @@ - confidence_score: 0 - !!omap - id: "MAR06771" - - name: "" + - name: "3-(4-Hydroxyphenyl)pyruvate keto-enol-isomerase" - metabolites: !!omap - MAM00643c: 1 - MAM01005c: -1 @@ -83743,7 +83767,7 @@ - confidence_score: 0 - !!omap - id: "MAR06772" - - name: "" + - name: "4-Hydroxyphenylpyruvate:oxygen oxidoreductase (hydroxylating,decarboxylating)" - metabolites: !!omap - MAM01005c: -1 - MAM01596c: 1 @@ -83761,7 +83785,7 @@ - confidence_score: 0 - !!omap - id: "MAR06774" - - name: "" + - name: "Homogentisate:oxygen 1,2-oxidoreductase (decyclizing)" - metabolites: !!omap - MAM01010c: 1 - MAM02039c: 1 @@ -83779,7 +83803,7 @@ - confidence_score: 0 - !!omap - id: "MAR06776" - - name: "" + - name: "4-Maleylacetoacetate cis-trans-isomerase" - metabolites: !!omap - MAM01010c: -1 - MAM01863c: 1 @@ -83795,7 +83819,7 @@ - confidence_score: 0 - !!omap - id: "MAR06778" - - name: "" + - name: "4-fumarylacetoacetate fumarylhydrolase" - metabolites: !!omap - MAM01253c: 1 - MAM01862c: 1 @@ -83833,7 +83857,7 @@ - confidence_score: 0 - !!omap - id: "MAR06783" - - name: "" + - name: "3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming)" - metabolites: !!omap - MAM00981c: 1 - MAM01004c: -1 @@ -83850,7 +83874,7 @@ - confidence_score: 0 - !!omap - id: "MAR06784" - - name: "" + - name: "4-Coumarate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00981c: -1 - MAM00982c: 1 @@ -83892,7 +83916,7 @@ - confidence_score: 0 - !!omap - id: "MAR06786" - - name: "" + - name: "4-Hydroxybenzoyl-CoA hydrolase" - metabolites: !!omap - MAM00995c: 1 - MAM00996c: -1 @@ -83911,7 +83935,7 @@ - confidence_score: 0 - !!omap - id: "MAR06787" - - name: "" + - name: "L-tyrosine carboxy-lyase (tyramine-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -83929,7 +83953,7 @@ - confidence_score: 0 - !!omap - id: "MAR06788" - - name: "" + - name: "S-Adenosyl-L-methionine:tyramine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02606c: 1 @@ -83948,7 +83972,7 @@ - confidence_score: 0 - !!omap - id: "MAR06789" - - name: "" + - name: "tyramine:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM01002c: 1 - MAM02039c: 1 @@ -83969,7 +83993,7 @@ - confidence_score: 0 - !!omap - id: "MAR06790" - - name: "" + - name: "4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01002c: -1 - MAM01003c: 1 @@ -83989,7 +84013,7 @@ - confidence_score: 0 - !!omap - id: "MAR06791" - - name: "" + - name: "4-Hydroxyphenylacetaldehyde:NADP+ oxidoreductase" - metabolites: !!omap - MAM01002c: -1 - MAM01003c: 1 @@ -84809,7 +84833,7 @@ - confidence_score: 0 - !!omap - id: "MAR06854" - - name: "" + - name: "3,3',5-triiodo-L-thyronine,iodide:acceptor oxidoreductase (iodinating)" - metabolites: !!omap - MAM02174c: -1 - MAM02554c: -1 @@ -84828,7 +84852,7 @@ - confidence_score: 0 - !!omap - id: "MAR06855" - - name: "" + - name: "3,3',5-triiodo-L-thyronine,iodide:acceptor oxidoreductase (iodinating)" - metabolites: !!omap - MAM02174r: -1 - MAM02554r: -1 @@ -84847,7 +84871,7 @@ - confidence_score: 0 - !!omap - id: "MAR06874" - - name: "" + - name: "L-Tyrosine,L-dopa:oxygen oxidoreductase" - metabolites: !!omap - MAM02040c: 1 - MAM02356c: 1 @@ -85059,7 +85083,7 @@ - confidence_score: 0 - !!omap - id: "MAR06888" - - name: "" + - name: "L-Dopachrome delta7-delta2-isomerase" - metabolites: !!omap - MAM01053c: 1 - MAM02355c: -1 @@ -85093,7 +85117,7 @@ - confidence_score: 0 - !!omap - id: "MAR07628" - - name: "" + - name: "L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM00673c: 1 - MAM01596c: 1 @@ -85112,7 +85136,7 @@ - confidence_score: 0 - !!omap - id: "MAR07756" - - name: "" + - name: "2-phenylacetamide amidohydrolase" - metabolites: !!omap - MAM00673c: -1 - MAM02039c: 1 @@ -85131,7 +85155,7 @@ - confidence_score: 0 - !!omap - id: "MAR08539" - - name: "" + - name: "L-phenylalanine,tetrahydrobiopterin:oxygen oxidoreductase(4-hydroxylating)" - metabolites: !!omap - MAM00965c: 1 - MAM02630c: -1 @@ -85150,7 +85174,7 @@ - confidence_score: 0 - !!omap - id: "MAR08794" - - name: "" + - name: "Phenylacetate:CoA ligase" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -85170,7 +85194,7 @@ - confidence_score: 0 - !!omap - id: "MAR08795" - - name: "" + - name: "Phenylacetyl-CoA:L-glutamine alpha-N-phenylacetyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM01975c: -1 @@ -85188,7 +85212,7 @@ - confidence_score: 0 - !!omap - id: "MAR08796" - - name: "" + - name: "phenylacetyl-CoA:glycine N-phenylacetyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM01986c: -1 @@ -85207,7 +85231,7 @@ - confidence_score: 0 - !!omap - id: "MAR03875" - - name: "" + - name: "ATP:L-methionine S-adenosyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM02040c: -1 @@ -85227,7 +85251,7 @@ - confidence_score: 0 - !!omap - id: "MAR03877" - - name: "" + - name: "S-Adenosyl-L-homocysteine hydrolase" - metabolites: !!omap - MAM01280c: 1 - MAM02040c: -1 @@ -85245,7 +85269,7 @@ - confidence_score: 0 - !!omap - id: "MAR03879" - - name: "" + - name: "L-serine hydro-lyase (adding homocysteine" - metabolites: !!omap - MAM02040c: 1 - MAM02133c: -1 @@ -85263,7 +85287,7 @@ - confidence_score: 0 - !!omap - id: "MAR03881" - - name: "" + - name: "L-cystathionine cysteine-lyase (deaminating" - metabolites: !!omap - MAM00671c: 1 - MAM01628c: 1 @@ -85283,7 +85307,7 @@ - confidence_score: 0 - !!omap - id: "MAR03912" - - name: "" + - name: "L-Cysteine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306c: -1 - MAM01628c: -1 @@ -85301,7 +85325,7 @@ - confidence_score: 0 - !!omap - id: "MAR03917" - - name: "" + - name: "5-methyltetrahydrofolate:L-homocysteine S-methyltransferase" - metabolites: !!omap - MAM01115c: -1 - MAM02039c: 1 @@ -85375,7 +85399,7 @@ - confidence_score: 0 - !!omap - id: "MAR03928" - - name: "" + - name: "3-mercaptopyruvate:sulfide sulfurtransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02043c: 1 @@ -85413,7 +85437,7 @@ - confidence_score: 0 - !!omap - id: "MAR03996" - - name: "" + - name: "L-cysteine:NAD+ oxidoreductase" - metabolites: !!omap - MAM01628c: 2 - MAM01629c: -1 @@ -85432,7 +85456,7 @@ - confidence_score: 0 - !!omap - id: "MAR04072" - - name: "" + - name: "S-Adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase" - metabolites: !!omap - MAM01721c: -1 - MAM01722c: 1 @@ -85451,7 +85475,7 @@ - confidence_score: 0 - !!omap - id: "MAR04189" - - name: "" + - name: "Sulfite:oxygen oxidoreductase" - metabolites: !!omap - MAM02040m: -1 - MAM02041m: 1 @@ -85470,7 +85494,7 @@ - confidence_score: 0 - !!omap - id: "MAR04302" - - name: "" + - name: "L-cysteine hydrogen-sulfide-lyase (deaminating" - metabolites: !!omap - MAM01628c: -1 - MAM02039c: 2 @@ -85490,7 +85514,7 @@ - confidence_score: 0 - !!omap - id: "MAR04323" - - name: "" + - name: "L-serine hydro-lyase (adding hydrogen sulfide, L-cysteine-forming)" - metabolites: !!omap - MAM01628c: 1 - MAM02039c: -1 @@ -85509,7 +85533,7 @@ - confidence_score: 0 - !!omap - id: "MAR05381" - - name: "" + - name: "adenosine 3',5'-bisphosphate,sulfite:oxidized-thioredoxin oxidoreductase (3'-phosphoadenosine-5'-phosphosulfate -forming)" - metabolites: !!omap - MAM02039c: 2 - MAM02666c: 1 @@ -85529,7 +85553,7 @@ - confidence_score: 0 - !!omap - id: "MAR05385" - - name: "" + - name: "5-methylthio-5-deoxy-D-ribose-1-phosphate ketol-isomerase" - metabolites: !!omap - MAM02481c: -1 - MAM02910c: 1 @@ -85545,7 +85569,7 @@ - confidence_score: 0 - !!omap - id: "MAR05386" - - name: "" + - name: "S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase" - metabolites: !!omap - MAM00572c: 1 - MAM02040c: 1 @@ -85580,7 +85604,7 @@ - confidence_score: 4 - !!omap - id: "MAR05388" - - name: "" + - name: "1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate- and CO-forming)" - metabolites: !!omap - MAM00245c: -1 - MAM00684c: 1 @@ -85619,7 +85643,7 @@ - confidence_score: 4 - !!omap - id: "MAR05390" - - name: "" + - name: "L-Methionine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01016c: 1 - MAM02039c: 1 @@ -85696,7 +85720,7 @@ - confidence_score: 0 - !!omap - id: "MAR06515" - - name: "" + - name: "3-mercaptopyruvate:sulfide sulfurtransferase" - metabolites: !!omap - MAM02464c: -1 - MAM02819c: 1 @@ -85733,7 +85757,7 @@ - confidence_score: 0 - !!omap - id: "MAR06519" - - name: "" + - name: "3-Mercaptolactate:NAD+ oxidoreductase" - metabolites: !!omap - MAM00815c: -1 - MAM02039c: 1 @@ -85752,7 +85776,7 @@ - confidence_score: 0 - !!omap - id: "MAR06520" - - name: "" + - name: "thiosulfate:cyanide sulfurtranserase" - metabolites: !!omap - MAM02039m: 1 - MAM02145m: -1 @@ -85810,7 +85834,7 @@ - confidence_score: 0 - !!omap - id: "MAR08066" - - name: "" + - name: "L-cysteate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00920c: -1 - MAM01306c: 1 @@ -85828,7 +85852,7 @@ - confidence_score: 0 - !!omap - id: "MAR08067" - - name: "" + - name: "L-cysteate:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00920m: -1 - MAM01306m: 1 @@ -85846,7 +85870,7 @@ - confidence_score: 0 - !!omap - id: "MAR08068" - - name: "" + - name: "(R)-2-hydroxyacid:NAD+ oxidoreductase" - metabolites: !!omap - MAM00179c: -1 - MAM00920c: 1 @@ -85865,7 +85889,7 @@ - confidence_score: 0 - !!omap - id: "MAR08069" - - name: "" + - name: "(R)-2-hydroxyacid:NAD+ oxidoreductase" - metabolites: !!omap - MAM00179m: -1 - MAM00920m: 1 @@ -85884,7 +85908,7 @@ - confidence_score: 0 - !!omap - id: "MAR08641" - - name: "" + - name: "S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase" - metabolites: !!omap - MAM01721n: -1 - MAM01722n: 1 @@ -85921,7 +85945,7 @@ - confidence_score: 0 - !!omap - id: "MAR08683" - - name: "" + - name: "L-cystine thiocysteine-lyase (deaminating" - metabolites: !!omap - MAM01629c: -1 - MAM02039c: 1 @@ -85941,7 +85965,7 @@ - confidence_score: 0 - !!omap - id: "MAR08684" - - name: "" + - name: "L-Cysteine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM01306m: -1 - MAM01628m: -1 @@ -85979,7 +86003,7 @@ - confidence_score: 0 - !!omap - id: "MAR03868" - - name: "" + - name: "glutathione:NAD+ oxidoreductase" - metabolites: !!omap - MAM02026c: 2 - MAM02027c: -1 @@ -85998,7 +86022,7 @@ - confidence_score: 0 - !!omap - id: "MAR03869" - - name: "" + - name: "glutathione:NAD+ oxidoreductase" - metabolites: !!omap - MAM02026m: 2 - MAM02027m: -1 @@ -86017,7 +86041,7 @@ - confidence_score: 0 - !!omap - id: "MAR03889" - - name: "" + - name: "5-oxo-L-proline amidohydrolase (ATP-hydrolysing)" - metabolites: !!omap - MAM01127c: -1 - MAM01285c: 1 @@ -86038,7 +86062,7 @@ - confidence_score: 0 - !!omap - id: "MAR03933" - - name: "" + - name: "S-(hydroxymethyl)glutathione dehydrogenase" - metabolites: !!omap - MAM01837c: -1 - MAM02039c: -1 @@ -86057,7 +86081,7 @@ - confidence_score: 0 - !!omap - id: "MAR03937" - - name: "" + - name: "S-Formylglutathione hydrolase" - metabolites: !!omap - MAM01833c: 1 - MAM01837c: -1 @@ -86076,7 +86100,7 @@ - confidence_score: 0 - !!omap - id: "MAR04116" - - name: "" + - name: "glutathione:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02026c: -2 - MAM02027c: 1 @@ -86094,7 +86118,7 @@ - confidence_score: 0 - !!omap - id: "MAR04120" - - name: "" + - name: "glutathione:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02026e: -2 - MAM02027e: 1 @@ -86112,7 +86136,7 @@ - confidence_score: 0 - !!omap - id: "MAR04121" - - name: "" + - name: "glutathione:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02026m: -2 - MAM02027m: 1 @@ -86130,7 +86154,7 @@ - confidence_score: 0 - !!omap - id: "MAR04175" - - name: "" + - name: "glutathione gamma-glutamylaminopeptidase" - metabolites: !!omap - MAM01626c: 1 - MAM01974c: 1 @@ -86148,7 +86172,7 @@ - confidence_score: 0 - !!omap - id: "MAR04176" - - name: "" + - name: "glutathione gamma-glutamylaminopeptidase" - metabolites: !!omap - MAM01626e: 1 - MAM01974e: 1 @@ -86166,7 +86190,7 @@ - confidence_score: 0 - !!omap - id: "MAR04324" - - name: "" + - name: "L-glutamate:L-cysteine gamma-ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -86187,7 +86211,7 @@ - confidence_score: 0 - !!omap - id: "MAR04326" - - name: "" + - name: "gamma-L-glutamyl-L-cysteine:glycine ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -86208,7 +86232,7 @@ - confidence_score: 0 - !!omap - id: "MAR04328" - - name: "" + - name: "L-cysteinylglycine dipeptidase" - metabolites: !!omap - MAM01626c: -1 - MAM01628c: 1 @@ -86226,7 +86250,7 @@ - confidence_score: 0 - !!omap - id: "MAR04329" - - name: "" + - name: "L-cysteinylglycine dipeptidase" - metabolites: !!omap - MAM01626e: -1 - MAM01628e: 1 @@ -86244,7 +86268,7 @@ - confidence_score: 0 - !!omap - id: "MAR04708" - - name: "" + - name: "gamma-L-glutamyl-L-cysteine gamma-glutamyl cyclotransferase (5-oxoproline-forming)" - metabolites: !!omap - MAM01127c: 1 - MAM01628c: 1 @@ -86317,7 +86341,7 @@ - confidence_score: 0 - !!omap - id: "MAR04078" - - name: "" + - name: "spermidine:oxygen oxidoreductase (spermidine-forming)" - metabolites: !!omap - MAM00760c: 1 - MAM02040c: -1 @@ -86357,7 +86381,7 @@ - confidence_score: 0 - !!omap - id: "MAR04174" - - name: "" + - name: "L-aspartate 1-carboxy-lyase (beta-alanine-forming)" - metabolites: !!omap - MAM01370c: -1 - MAM01383c: 1 @@ -86375,7 +86399,7 @@ - confidence_score: 0 - !!omap - id: "MAR04330" - - name: "" + - name: "beta-alanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00900m: -1 - MAM01306m: 1 @@ -86393,7 +86417,7 @@ - confidence_score: 0 - !!omap - id: "MAR04347" - - name: "" + - name: "3-ureidopropanoate amidohydrolase" - metabolites: !!omap - MAM00923c: -1 - MAM01383c: 1 @@ -86413,7 +86437,7 @@ - confidence_score: 0 - !!omap - id: "MAR04425" - - name: "" + - name: "L-histidine:beta-alanine ligase (ADP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -86434,7 +86458,7 @@ - confidence_score: 0 - !!omap - id: "MAR04427" - - name: "" + - name: "Nalpha-(beta-alanyl)-L-histidine hydrolase" - metabolites: !!omap - MAM01383c: 1 - MAM01423c: -1 @@ -86452,7 +86476,7 @@ - confidence_score: 0 - !!omap - id: "MAR04688" - - name: "" + - name: "4-aminobutanal:NAD+ 1-oxidoreductase" - metabolites: !!omap - MAM00969m: -1 - MAM00970m: 1 @@ -86472,7 +86496,7 @@ - confidence_score: 0 - !!omap - id: "MAR04689" - - name: "" + - name: "4-aminobutanal:NAD+ 1-oxidoreductase" - metabolites: !!omap - MAM00969c: -1 - MAM00970c: 1 @@ -86492,7 +86516,7 @@ - confidence_score: 0 - !!omap - id: "MAR04735" - - name: "" + - name: "3-Hydroxypropionyl-CoA hydro-lyase" - metabolites: !!omap - MAM00799m: 1 - MAM01265m: -1 @@ -86509,7 +86533,7 @@ - confidence_score: 0 - !!omap - id: "MAR07991" - - name: "" + - name: "spermidine:(acceptor) oxidoreductase" - metabolites: !!omap - MAM00248c: 1 - MAM00969c: 1 @@ -86570,7 +86594,7 @@ - confidence_score: 0 - !!omap - id: "MAR07128" - - name: "" + - name: "ATP:selenate adenylyltransferase" - metabolites: !!omap - MAM01284c: 1 - MAM01371c: -1 @@ -86589,7 +86613,7 @@ - confidence_score: 0 - !!omap - id: "MAR07129" - - name: "" + - name: "ATP:adenylylsulfate 3'-phosphotransferase" - metabolites: !!omap - MAM00912c: 1 - MAM01284c: -1 @@ -86628,7 +86652,7 @@ - confidence_score: 0 - !!omap - id: "MAR07131" - - name: "" + - name: "hydrogen selenide:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039c: -4 - MAM02040c: 3 @@ -86648,7 +86672,7 @@ - confidence_score: 0 - !!omap - id: "MAR07132" - - name: "" + - name: "ATP:selenide, water phosphotransferase" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -86668,7 +86692,7 @@ - confidence_score: 0 - !!omap - id: "MAR07133" - - name: "" + - name: "L-selenocysteine selenide-lyase (L-alanine-forming)" - metabolites: !!omap - MAM01307c: -1 - MAM02039c: -1 @@ -86688,7 +86712,7 @@ - confidence_score: 0 - !!omap - id: "MAR07134" - - name: "" + - name: "Selenocystathionine Lysteine-lyase (deaminating)" - metabolites: !!omap - MAM00671c: 1 - MAM02039c: 1 @@ -86708,7 +86732,7 @@ - confidence_score: 0 - !!omap - id: "MAR07135" - - name: "" + - name: "L-Serine hydro-lyase (adding homocysteine)" - metabolites: !!omap - MAM02040c: -1 - MAM02888c: -1 @@ -86726,7 +86750,7 @@ - confidence_score: 0 - !!omap - id: "MAR07136" - - name: "" + - name: "Se-Adenosylselenohomocysteine hydrolase" - metabolites: !!omap - MAM01280c: 1 - MAM02040c: -1 @@ -86744,7 +86768,7 @@ - confidence_score: 0 - !!omap - id: "MAR07137" - - name: "" + - name: "Selenomethionine methanethiol-lyase (deaminating)" - metabolites: !!omap - MAM00671c: 1 - MAM02039c: 1 @@ -86785,7 +86809,7 @@ - confidence_score: 0 - !!omap - id: "MAR07139" - - name: "" + - name: "ATP:L-selenomethione S-adenosyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM02040c: -1 @@ -86805,7 +86829,7 @@ - confidence_score: 0 - !!omap - id: "MAR07140" - - name: "" + - name: "S-Adenosyl-L-methionine:thiol S-methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02871c: -1 @@ -86824,7 +86848,7 @@ - confidence_score: 0 - !!omap - id: "MAR07141" - - name: "" + - name: "Se-methyl-L-selenocysteine methaneselenol-lyase (deaminating" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -86844,7 +86868,7 @@ - confidence_score: 0 - !!omap - id: "MAR07620" - - name: "" + - name: "Selenomethionine:tRNAMet ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -86864,7 +86888,7 @@ - confidence_score: 0 - !!omap - id: "MAR07647" - - name: "" + - name: "D-alanine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01638x: -1 - MAM02039x: 1 @@ -86904,7 +86928,7 @@ - confidence_score: 0 - !!omap - id: "MAR08689" - - name: "" + - name: "D-Arginine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01101x: 1 - MAM01640x: -1 @@ -86925,7 +86949,7 @@ - confidence_score: 0 - !!omap - id: "MAR08690" - - name: "" + - name: "D-Ornithine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01073x: 1 - MAM01740x: -1 @@ -86946,7 +86970,7 @@ - confidence_score: 0 - !!omap - id: "MAR03748" - - name: "" + - name: "3-methyl-2-oxobutanoate:NAD+ oxidoreductase (CoA-mehtylpropanoylating)" - metabolites: !!omap - MAM00824m: -1 - MAM01596m: 1 @@ -86984,7 +87008,7 @@ - confidence_score: 0 - !!omap - id: "MAR03753" - - name: "" + - name: "(S)-3-Hydroxyisobutyryl-CoA hydro-lyase" - metabolites: !!omap - MAM00785m: 1 - MAM02040m: -1 @@ -87001,7 +87025,7 @@ - confidence_score: 0 - !!omap - id: "MAR03755" - - name: "" + - name: "3-Hydroxy-2-methylpropanoyl-CoA hydrolase" - metabolites: !!omap - MAM00784m: 1 - MAM00785m: -1 @@ -87020,7 +87044,7 @@ - confidence_score: 0 - !!omap - id: "MAR03759" - - name: "" + - name: "(S)-Methylmalonate semialdehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM00661m: -1 - MAM02039m: 2 @@ -87040,7 +87064,7 @@ - confidence_score: 0 - !!omap - id: "MAR03763" - - name: "" + - name: "(S)-Methylmalonyl-CoA hydrolase" - metabolites: !!omap - MAM00166m: 1 - MAM01597m: -1 @@ -87059,7 +87083,7 @@ - confidence_score: 0 - !!omap - id: "MAR03767" - - name: "" + - name: "4-methyl-2-oxopentanoate:NAD+ oxidoreductase (CoA-mehtylpropanoylating)" - metabolites: !!omap - MAM01013m: -1 - MAM01596m: 1 @@ -87079,7 +87103,7 @@ - confidence_score: 0 - !!omap - id: "MAR03769" - - name: "" + - name: "3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00826m: -1 - MAM02189m: 1 @@ -87097,7 +87121,7 @@ - confidence_score: 0 - !!omap - id: "MAR03773" - - name: "" + - name: "3-Methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM00826m: -1 - MAM00827m: 1 @@ -87118,7 +87142,7 @@ - confidence_score: 0 - !!omap - id: "MAR03775" - - name: "" + - name: "(S)-3-Hydroxy-3-methylglutaryl-CoA hydro-lyase (trans-3-methylglutaconyl-CoA-forming)" - metabolites: !!omap - MAM00827m: -1 - MAM02040m: -1 @@ -87135,7 +87159,7 @@ - confidence_score: 0 - !!omap - id: "MAR03780" - - name: "" + - name: "(S)-3-methyl-2-oxopentanoate:NAD+ 2-oxidoreductase (CoA-methylbutanoylating)" - metabolites: !!omap - MAM00663m: 1 - MAM00669m: -1 @@ -87155,7 +87179,7 @@ - confidence_score: 0 - !!omap - id: "MAR03783" - - name: "" + - name: "(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase" - metabolites: !!omap - MAM00663m: -1 - MAM02999m: 1 @@ -87173,7 +87197,7 @@ - confidence_score: 0 - !!omap - id: "MAR03785" - - name: "" + - name: "(2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA hydro-liase" - metabolites: !!omap - MAM00171m: 1 - MAM02040m: -1 @@ -87190,7 +87214,7 @@ - confidence_score: 0 - !!omap - id: "MAR03790" - - name: "" + - name: "(S)-Methylmalonate semialdehyde:oxygen oxidoreductase" - metabolites: !!omap - MAM00661c: -1 - MAM02039c: 1 @@ -87228,7 +87252,7 @@ - confidence_score: 0 - !!omap - id: "MAR03796" - - name: "" + - name: "Propionyladenylate:CoA propionyltransferase" - metabolites: !!omap - MAM01334m: -1 - MAM01597m: 1 @@ -87247,7 +87271,7 @@ - confidence_score: 0 - !!omap - id: "MAR03823" - - name: "" + - name: "(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00171m: -1 - MAM00662m: 1 @@ -87266,7 +87290,7 @@ - confidence_score: 0 - !!omap - id: "MAR06416" - - name: "" + - name: "3-methyl-2-oxobutanoate:[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating)" - metabolites: !!omap - MAM00824m: -1 - MAM01596m: 1 @@ -87302,7 +87326,7 @@ - confidence_score: 0 - !!omap - id: "MAR03988" - - name: "" + - name: "chitobiose N-acetylglucosaminohydrolase" - metabolites: !!omap - MAM01439l: -1 - MAM02040l: -1 @@ -87319,7 +87343,7 @@ - confidence_score: 0 - !!omap - id: "MAR04124" - - name: "" + - name: "UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)" - metabolites: !!omap - MAM01596r: 1 - MAM02039r: -1 @@ -87356,7 +87380,7 @@ - confidence_score: 0 - !!omap - id: "MAR04159" - - name: "" + - name: "UDP-N-acetyl-D-glucosamine 4-epimerase" - metabolites: !!omap - MAM03110c: -1 - MAM03111c: 1 @@ -87372,7 +87396,7 @@ - confidence_score: 0 - !!omap - id: "MAR04299" - - name: "" + - name: "D-glucosamine-6-phosphate aminohydrolase (ketol isomerizing)" - metabolites: !!omap - MAM01845c: 1 - MAM01963c: -1 @@ -87391,7 +87415,7 @@ - confidence_score: 0 - !!omap - id: "MAR04300" - - name: "" + - name: "L-glutamine:D-fructose-6-phosphate isomerase (deaminating)" - metabolites: !!omap - MAM01845c: -1 - MAM01963c: 1 @@ -87409,7 +87433,7 @@ - confidence_score: 0 - !!omap - id: "MAR04494" - - name: "" + - name: "ATP:D-glucosamine 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -87428,7 +87452,7 @@ - confidence_score: 0 - !!omap - id: "MAR04524" - - name: "" + - name: "ATP:N-acetyl-D-glucosamine 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -87447,7 +87471,7 @@ - confidence_score: 0 - !!omap - id: "MAR04525" - - name: "" + - name: "UDP-N-acetyl-D-glucosamine 2-epimerase" - metabolites: !!omap - MAM02039r: 1 - MAM02040r: -1 @@ -87466,7 +87490,7 @@ - confidence_score: 0 - !!omap - id: "MAR04526" - - name: "" + - name: "UDP-N-acetyl-D-glucosamine 2-epimerase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -87485,7 +87509,7 @@ - confidence_score: 0 - !!omap - id: "MAR04527" - - name: "" + - name: "N-acetyl-D-glucosamine 2-epimerase" - metabolites: !!omap - MAM02524c: -1 - MAM02527c: 1 @@ -87501,7 +87525,7 @@ - confidence_score: 0 - !!omap - id: "MAR04528" - - name: "" + - name: "ATP:N-acyl-D-mannosamine 6-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -87520,7 +87544,7 @@ - confidence_score: 0 - !!omap - id: "MAR04529" - - name: "" + - name: "phosphoenolpyruvate:N-acetyl-D-mannosamine-6-phosphate C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)" - metabolites: !!omap - MAM02040c: -1 - MAM02539c: -1 @@ -87539,7 +87563,7 @@ - confidence_score: 0 - !!omap - id: "MAR04530" - - name: "" + - name: "N-Acetylneuraminate 9-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02543c: 1 @@ -87557,7 +87581,7 @@ - confidence_score: 0 - !!omap - id: "MAR04531" - - name: "" + - name: "N-acetylneuraminate,ferrocytochrome-b5:oxygen oxidoreductase (N-acetyl-hydroxylating)" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 1 @@ -87578,7 +87602,7 @@ - confidence_score: 0 - !!omap - id: "MAR04532" - - name: "" + - name: "CTP:N-glycoloylneuraminate cytidylyltransferase" - metabolites: !!omap - MAM01593c: -1 - MAM01623c: 1 @@ -87596,7 +87620,7 @@ - confidence_score: 0 - !!omap - id: "MAR04533" - - name: "" + - name: "CMP-N-acetylneuraminate,ferrocytochrome-b5:oxygen oxidoreductase (N-acetyl-hydroxylating)" - metabolites: !!omap - MAM01592c: 1 - MAM01593c: -1 @@ -87638,7 +87662,7 @@ - confidence_score: 0 - !!omap - id: "MAR04536" - - name: "" + - name: "CTP:N-acetylneuraminate cytidylyltransferase" - metabolites: !!omap - MAM01592n: -1 - MAM01623n: 1 @@ -87656,7 +87680,7 @@ - confidence_score: 0 - !!omap - id: "MAR04628" - - name: "" + - name: "acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase" - metabolites: !!omap - MAM01261c: -1 - MAM01597c: 1 @@ -87675,7 +87699,7 @@ - confidence_score: 0 - !!omap - id: "MAR04629" - - name: "" + - name: "N-Acetyl-D-glucosamine-6-phosphate amidohydrolase" - metabolites: !!omap - MAM01252c: 1 - MAM01963c: 1 @@ -87709,7 +87733,7 @@ - confidence_score: 0 - !!omap - id: "MAR07696" - - name: "" + - name: "dTTP:alpha-D-glucose-1-phosphate thymidylyltransferase" - metabolites: !!omap - MAM01751c: 1 - MAM01753c: -1 @@ -87728,7 +87752,7 @@ - confidence_score: 0 - !!omap - id: "MAR07697" - - name: "" + - name: "dTDPglucose 4,6-hydro-lyase" - metabolites: !!omap - MAM00946c: 1 - MAM01751c: -1 @@ -87745,7 +87769,7 @@ - confidence_score: 0 - !!omap - id: "MAR07698" - - name: "" + - name: "dTDPglucose 4-epimerase" - metabolites: !!omap - MAM01750c: -1 - MAM01751c: 1 @@ -87799,7 +87823,7 @@ - confidence_score: 0 - !!omap - id: "MAR08368" - - name: "" + - name: "UTP:N-acetyl-alpha-D-galactosamine-1-phosphate uridylyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02526c: -1 @@ -87855,7 +87879,7 @@ - confidence_score: 0 - !!omap - id: "MAR08373" - - name: "" + - name: "N-Acetylneuraminate pyruvate-lyase (N-acetyl-D-mannosamine-forming)" - metabolites: !!omap - MAM02524c: -1 - MAM02543c: 1 @@ -87872,7 +87896,7 @@ - confidence_score: 0 - !!omap - id: "MAR08375" - - name: "" + - name: "chitobiose N-acetylglucosaminohydrolase" - metabolites: !!omap - MAM01438c: -1 - MAM02040c: -1 @@ -87889,7 +87913,7 @@ - confidence_score: 0 - !!omap - id: "MAR08376" - - name: "" + - name: "chitobiose N-acetylglucosaminohydrolase" - metabolites: !!omap - MAM01438e: -1 - MAM02040e: -1 @@ -87906,7 +87930,7 @@ - confidence_score: 0 - !!omap - id: "MAR08377" - - name: "" + - name: "CTP:N-acetylneuraminate cytidylyltransferase" - metabolites: !!omap - MAM01592c: 1 - MAM01623c: -1 @@ -87924,7 +87948,7 @@ - confidence_score: 0 - !!omap - id: "MAR08672" - - name: "" + - name: "UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)" - metabolites: !!omap - MAM01596g: 1 - MAM02039g: -1 @@ -87942,7 +87966,7 @@ - confidence_score: 0 - !!omap - id: "MAR08674" - - name: "" + - name: "dTDP-4-dehydro-6-deoxy-alpha-D-glucose 3,5-epimerase" - metabolites: !!omap - MAM00946c: -1 - MAM01748c: 1 @@ -87958,7 +87982,7 @@ - confidence_score: 0 - !!omap - id: "MAR08675" - - name: "" + - name: "dTDP-beta-L-rhamnose:NADP+ 4-oxidoreductase" - metabolites: !!omap - MAM01748c: -1 - MAM01749c: 1 @@ -87977,7 +88001,7 @@ - confidence_score: 0 - !!omap - id: "MAR05130" - - name: "" + - name: "L-Tyrosine:tRNA(Tyr) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -87997,7 +88021,7 @@ - confidence_score: 0 - !!omap - id: "MAR05131" - - name: "" + - name: "L-Alanine:tRNA(Ala) ligase (AMP-forming)" - metabolites: !!omap - MAM01307c: -1 - MAM01334c: 1 @@ -88017,7 +88041,7 @@ - confidence_score: 0 - !!omap - id: "MAR05132" - - name: "" + - name: "L-Arginine:tRNA(Arg) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01365c: -1 @@ -88037,7 +88061,7 @@ - confidence_score: 0 - !!omap - id: "MAR05133" - - name: "" + - name: "L-Asparagine:tRNA(Asn) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01369c: -1 @@ -88057,7 +88081,7 @@ - confidence_score: 0 - !!omap - id: "MAR05134" - - name: "" + - name: "L-Aspartate:tRNA(Asp) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01370c: -1 @@ -88077,7 +88101,7 @@ - confidence_score: 0 - !!omap - id: "MAR05135" - - name: "" + - name: "L-Cysteine:tRNA(Cys) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88097,7 +88121,7 @@ - confidence_score: 0 - !!omap - id: "MAR05136" - - name: "" + - name: "L-Glutamine:tRNA(Gln) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88117,7 +88141,7 @@ - confidence_score: 0 - !!omap - id: "MAR05137" - - name: "" + - name: "L-glutamate:tRNA(Glu) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88137,7 +88161,7 @@ - confidence_score: 0 - !!omap - id: "MAR05138" - - name: "" + - name: "glycine:tRNA(Gly) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88157,7 +88181,7 @@ - confidence_score: 0 - !!omap - id: "MAR05139" - - name: "" + - name: "L-Histidine:tRNA(His) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88177,7 +88201,7 @@ - confidence_score: 0 - !!omap - id: "MAR05140" - - name: "" + - name: "L-Isoleucine:tRNA(Ile) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88197,7 +88221,7 @@ - confidence_score: 0 - !!omap - id: "MAR05141" - - name: "" + - name: "L-Leucine:tRNA(Leu) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88217,7 +88241,7 @@ - confidence_score: 0 - !!omap - id: "MAR05142" - - name: "" + - name: "L-lysine:tRNALys ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88237,7 +88261,7 @@ - confidence_score: 0 - !!omap - id: "MAR05143" - - name: "" + - name: "L-Methionine:tRNAMet ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88257,7 +88281,7 @@ - confidence_score: 0 - !!omap - id: "MAR05144" - - name: "" + - name: "10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase" - metabolites: !!omap - MAM00266c: -1 - MAM02408c: -1 @@ -88275,7 +88299,7 @@ - confidence_score: 0 - !!omap - id: "MAR05145" - - name: "" + - name: "L-Phenylalanine:tRNA(Ala) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88295,7 +88319,7 @@ - confidence_score: 0 - !!omap - id: "MAR05146" - - name: "" + - name: "L-proline:tRNA(Pro) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88315,7 +88339,7 @@ - confidence_score: 0 - !!omap - id: "MAR05147" - - name: "" + - name: "L-Serine:tRNA(Ser) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88335,7 +88359,7 @@ - confidence_score: 0 - !!omap - id: "MAR05148" - - name: "" + - name: "L-Threonine:tRNA(Thr) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88355,7 +88379,7 @@ - confidence_score: 0 - !!omap - id: "MAR05149" - - name: "" + - name: "L-Tryptophan -tRNA(Trp) ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88375,7 +88399,7 @@ - confidence_score: 0 - !!omap - id: "MAR05150" - - name: "" + - name: "L-Valine:tRNAVal ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -88754,7 +88778,7 @@ - confidence_score: 0 - !!omap - id: "MAR07254" - - name: "" + - name: "(2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate cistransferase (adding 10-55 isopentenyl units)" - metabolites: !!omap - MAM01657c: 1 - MAM02187c: -16 @@ -88772,7 +88796,7 @@ - confidence_score: 0 - !!omap - id: "MAR07256" - - name: "" + - name: "Dolichyl-diphosphate phosphohydrolase" - metabolites: !!omap - MAM01732c: -1 - MAM01733c: 1 @@ -88865,7 +88889,7 @@ - confidence_score: 0 - !!omap - id: "MAR07263" - - name: "" + - name: "CTP:dolichol O-phosphotransferase" - metabolites: !!omap - MAM01424c: 1 - MAM01623c: -1 @@ -88884,7 +88908,7 @@ - confidence_score: 0 - !!omap - id: "MAR07264" - - name: "" + - name: "UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosamine phosphotransferase" - metabolites: !!omap - MAM01733c: -1 - MAM02522c: 1 @@ -88940,7 +88964,7 @@ - confidence_score: 0 - !!omap - id: "MAR07267" - - name: "" + - name: "GDPmannose:glycolipid 1,3-alpha-D-mannosyltransferase" - metabolites: !!omap - MAM01323c: 1 - MAM01390c: -1 @@ -88959,7 +88983,7 @@ - confidence_score: 0 - !!omap - id: "MAR07268" - - name: "" + - name: "GDP-D-mannose:D-Man-alpha-(1->3)-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-6-mannosyltransferase" - metabolites: !!omap - MAM01323c: -1 - MAM01865c: 1 @@ -88978,7 +89002,7 @@ - confidence_score: 0 - !!omap - id: "MAR07269" - - name: "" + - name: "GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase" - metabolites: !!omap - MAM01865c: -1 - MAM01895c: 1 @@ -88997,7 +89021,7 @@ - confidence_score: 0 - !!omap - id: "MAR07270" - - name: "" + - name: "GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase" - metabolites: !!omap - MAM01866c: 1 - MAM01895c: -1 @@ -89016,7 +89040,7 @@ - confidence_score: 0 - !!omap - id: "MAR07271" - - name: "" + - name: "GDPmannose:dolichyl-phosphate O-beta-D-mannosyltransferase" - metabolites: !!omap - MAM01733c: -1 - MAM01734c: 1 @@ -89110,7 +89134,7 @@ - confidence_score: 0 - !!omap - id: "MAR07278" - - name: "" + - name: "UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase" - metabolites: !!omap - MAM01731r: 1 - MAM01733r: -1 @@ -89128,7 +89152,7 @@ - confidence_score: 0 - !!omap - id: "MAR07279" - - name: "" + - name: "dolichyl beta-D-glucosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-glucosyltransferase" - metabolites: !!omap - MAM01731r: -1 - MAM01733r: 1 @@ -89147,7 +89171,7 @@ - confidence_score: 0 - !!omap - id: "MAR07280" - - name: "" + - name: "dolichyl beta-D-glucosyl phosphate:D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-glucosyltransferase" - metabolites: !!omap - MAM01731r: -1 - MAM01733r: 1 @@ -89166,7 +89190,7 @@ - confidence_score: 0 - !!omap - id: "MAR07281" - - name: "" + - name: "dolichyl beta-D-glucosyl phosphate:D-Glc-alpha-(1->3)-D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-glucosyltransferase" - metabolites: !!omap - MAM00154r: 1 - MAM01731r: -1 @@ -90249,7 +90273,7 @@ - confidence_score: 0 - !!omap - id: "MAR08691" - - name: "" + - name: "Dolichyl-diphosphate phosphohydrolase" - metabolites: !!omap - MAM01732r: -1 - MAM01733r: 1 @@ -91792,7 +91816,7 @@ - confidence_score: 0 - !!omap - id: "MAR07619" - - name: "" + - name: "3'-Phosphoadenylylsulfate:protein-tyrosine O-sulfotransferase" - metabolites: !!omap - MAM00206c: -1 - MAM00217c: 1 @@ -91847,7 +91871,7 @@ - confidence_score: 0 - !!omap - id: "MAR07622" - - name: "" + - name: "Protein arginine iminohydrolase" - metabolites: !!omap - MAM00197c: -1 - MAM00199c: 1 @@ -91865,7 +91889,7 @@ - confidence_score: 0 - !!omap - id: "MAR07624" - - name: "" + - name: "protein-omega-N-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase" - metabolites: !!omap - MAM00197c: 1 - MAM00215c: -1 @@ -91883,7 +91907,7 @@ - confidence_score: 0 - !!omap - id: "MAR07626" - - name: "" + - name: "Nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase" - metabolites: !!omap - MAM01288c: 1 - MAM01365c: 1 @@ -93325,7 +93349,7 @@ - confidence_score: 0 - !!omap - id: "MAR05407" - - name: "" + - name: "carbonate hydro-lyase (carbon-dioxide-forming)" - metabolites: !!omap - MAM01421e: 1 - MAM01596e: -1 @@ -93361,7 +93385,7 @@ - confidence_score: 0 - !!omap - id: "MAR03861" - - name: "" + - name: "3-sulfino-L-alanine:2-oxoglutarate aminotransferase" - metabolites: !!omap - MAM00918c: -1 - MAM00919c: 1 @@ -93417,7 +93441,7 @@ - confidence_score: 0 - !!omap - id: "MAR04084" - - name: "" + - name: "adenosine-3',5'-bisphosphate 3'-phosphohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM02040c: -1 @@ -93435,7 +93459,7 @@ - confidence_score: 0 - !!omap - id: "MAR04187" - - name: "" + - name: "3'-phospho-5'-adenylyl sulfate 3'-phosphohydrolase" - metabolites: !!omap - MAM01283c: 1 - MAM02040c: -1 @@ -93474,7 +93498,7 @@ - confidence_score: 0 - !!omap - id: "MAR04701" - - name: "" + - name: "S-adenosyl-L-methionine:sarcosine N-methyltransferase" - metabolites: !!omap - MAM01708c: -1 - MAM02039c: -1 @@ -93502,7 +93526,7 @@ - MAM02946c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000198610" + - gene_reaction_rule: "" - rxnNotes: "" - rxnFrom: "HMRdatabase" - eccodes: "1.1.1.50" @@ -93529,7 +93553,7 @@ - confidence_score: 0 - !!omap - id: "MAR08662" - - name: "" + - name: "Itaconate:CoA ligase (GDP-forming)" - metabolites: !!omap - MAM01597m: -1 - MAM01948m: 1 @@ -93549,7 +93573,7 @@ - confidence_score: 0 - !!omap - id: "MAR08663" - - name: "" + - name: "Itaconate:CoA ligase (ADP-forming)" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -93569,7 +93593,7 @@ - confidence_score: 0 - !!omap - id: "MAR08664" - - name: "" + - name: "(3S)-citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)" - metabolites: !!omap - MAM00084m: -1 - MAM02040m: 1 @@ -93603,7 +93627,7 @@ - confidence_score: 0 - !!omap - id: "MAR08666" - - name: "" + - name: "(3S)-citramalyl-CoA pyruvate-lyase (acetyl-CoA-forming)" - metabolites: !!omap - MAM00084m: -1 - MAM01261m: 1 @@ -93678,7 +93702,7 @@ - confidence_score: 0 - !!omap - id: "MAR00710" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01306c: 1 - MAM01596c: 1 @@ -93697,7 +93721,7 @@ - confidence_score: 0 - !!omap - id: "MAR03787" - - name: "" + - name: "succinyl-CoA:acetoacetate CoA-transferase" - metabolites: !!omap - MAM01253m: -1 - MAM01255m: 1 @@ -93715,7 +93739,7 @@ - confidence_score: 0 - !!omap - id: "MAR03957" - - name: "" + - name: "isocitrate:NAD+ oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01306m: 1 - MAM01596m: 1 @@ -93734,7 +93758,7 @@ - confidence_score: 0 - !!omap - id: "MAR03958" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01306m: 1 - MAM01596m: 1 @@ -93753,7 +93777,7 @@ - confidence_score: 0 - !!omap - id: "MAR04111" - - name: "" + - name: "oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)" - metabolites: !!omap - MAM01306c: 1 - MAM01596c: 1 @@ -93771,7 +93795,7 @@ - confidence_score: 0 - !!omap - id: "MAR04112" - - name: "" + - name: "oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)" - metabolites: !!omap - MAM01306m: 1 - MAM01596m: 1 @@ -93789,7 +93813,7 @@ - confidence_score: 0 - !!omap - id: "MAR04113" - - name: "" + - name: "oxalosuccinate carboxy-lyase (2-oxoglutarate-forming)" - metabolites: !!omap - MAM01306x: 1 - MAM01596x: 1 @@ -93807,7 +93831,7 @@ - confidence_score: 0 - !!omap - id: "MAR04139" - - name: "" + - name: "(S)-malate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02439c: 1 @@ -93826,7 +93850,7 @@ - confidence_score: 0 - !!omap - id: "MAR04141" - - name: "" + - name: "(S)-malate:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02439m: 1 @@ -93845,7 +93869,7 @@ - confidence_score: 0 - !!omap - id: "MAR04145" - - name: "" + - name: "acetyl-CoA:oxaloacetate C-acetyltransferase (thioester-hydrolysing)" - metabolites: !!omap - MAM01261m: 1 - MAM01587m: -1 @@ -93865,7 +93889,7 @@ - confidence_score: 0 - !!omap - id: "MAR04147" - - name: "" + - name: "Succinate:CoA ligase (GDP-forming)" - metabolites: !!omap - MAM01597m: -1 - MAM01948m: 1 @@ -93885,7 +93909,7 @@ - confidence_score: 0 - !!omap - id: "MAR04149" - - name: "" + - name: "acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]" - metabolites: !!omap - MAM01261c: 1 - MAM01285c: 1 @@ -93906,7 +93930,7 @@ - confidence_score: 0 - !!omap - id: "MAR04152" - - name: "" + - name: "Succinate:CoA ligase (ADP-forming)" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -93945,7 +93969,7 @@ - confidence_score: 0 - !!omap - id: "MAR04408" - - name: "" + - name: "(S)-malate hydro-lyase (fumarate-forming)" - metabolites: !!omap - MAM01862c: -1 - MAM02040c: -1 @@ -93962,7 +93986,7 @@ - confidence_score: 0 - !!omap - id: "MAR04410" - - name: "" + - name: "(S)-malate hydro-lyase (fumarate-forming)" - metabolites: !!omap - MAM01862m: -1 - MAM02040m: -1 @@ -93979,7 +94003,7 @@ - confidence_score: 0 - !!omap - id: "MAR04454" - - name: "" + - name: "citrate hydroxymutase" - metabolites: !!omap - MAM01587c: -1 - MAM02183c: 1 @@ -93995,7 +94019,7 @@ - confidence_score: 0 - !!omap - id: "MAR04456" - - name: "" + - name: "citrate hydroxymutase" - metabolites: !!omap - MAM01587m: -1 - MAM02183m: 1 @@ -94011,7 +94035,7 @@ - confidence_score: 0 - !!omap - id: "MAR04458" - - name: "" + - name: "citrate hydro-lyase (cis-aconitate-forming)" - metabolites: !!omap - MAM01580m: -1 - MAM01587m: 1 @@ -94028,7 +94052,7 @@ - confidence_score: 0 - !!omap - id: "MAR04465" - - name: "" + - name: "D-glycerate:NADP+ 2-oxidoreductase" - metabolites: !!omap - MAM01982c: 1 - MAM02039c: -1 @@ -94047,7 +94071,7 @@ - confidence_score: 0 - !!omap - id: "MAR04585" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02183c: 1 @@ -94066,7 +94090,7 @@ - confidence_score: 0 - !!omap - id: "MAR04586" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02183m: 1 @@ -94085,7 +94109,7 @@ - confidence_score: 0 - !!omap - id: "MAR04587" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039x: -1 - MAM02183x: 1 @@ -94123,7 +94147,7 @@ - confidence_score: 0 - !!omap - id: "MAR04589" - - name: "" + - name: "isocitrate hydro-lyase (cis-aconitate-forming)" - metabolites: !!omap - MAM01580m: -1 - MAM02040m: -1 @@ -94140,7 +94164,7 @@ - confidence_score: 0 - !!omap - id: "MAR04652" - - name: "" + - name: "succinate:quinone oxidoreductase" - metabolites: !!omap - MAM01862m: -1 - MAM02943m: 1 @@ -94158,7 +94182,7 @@ - confidence_score: 0 - !!omap - id: "MAR05294" - - name: "" + - name: "citrate oxaloacetate-lyase (forming acetate from the pro-S carboxymethyl group of citrate)" - metabolites: !!omap - MAM01252m: 1 - MAM01587m: -1 @@ -94175,7 +94199,7 @@ - confidence_score: 0 - !!omap - id: "MAR05297" - - name: "" + - name: "2-oxoglutarate:NAD+ 2-oxidoreductase (CoA-succinylating)" - metabolites: !!omap - MAM01306m: -1 - MAM01596m: 1 @@ -94195,7 +94219,7 @@ - confidence_score: 0 - !!omap - id: "MAR06411" - - name: "" + - name: "2-oxoglutarate:[dihydrolipoyllysine-residue succinyltransferase]-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-succinylating)" - metabolites: !!omap - MAM01306m: -1 - MAM01596m: 1 @@ -94232,7 +94256,7 @@ - confidence_score: 0 - !!omap - id: "MAR06414" - - name: "" + - name: "succinyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-succinyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM01701m: 1 @@ -94250,7 +94274,7 @@ - confidence_score: 0 - !!omap - id: "MAR07704" - - name: "" + - name: "Glyoxylate:oxygen oxidoreductase" - metabolites: !!omap - MAM02007x: -1 - MAM02039x: 1 @@ -94270,7 +94294,7 @@ - confidence_score: 0 - !!omap - id: "MAR07706" - - name: "" + - name: "glycolate:oxygen 2-oxidoreductase" - metabolites: !!omap - MAM01998x: -1 - MAM02007x: 1 @@ -94288,7 +94312,7 @@ - confidence_score: 0 - !!omap - id: "MAR08743" - - name: "" + - name: "succinate:FAD oxidoreductase" - metabolites: !!omap - MAM01802m: 1 - MAM01803m: -1 @@ -94325,7 +94349,7 @@ - confidence_score: 0 - !!omap - id: "MAR08773" - - name: "" + - name: "L-xylulose 1-phosphate glycolaldehyde-lyase (glycerone-phosphate-forming)" - metabolites: !!omap - MAM01690c: 1 - MAM01760c: -1 @@ -94342,7 +94366,7 @@ - confidence_score: 0 - !!omap - id: "MAR08774" - - name: "" + - name: "hydroxypyruvate carboxy-lyase (glycolaldehyde-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM01997c: 1 @@ -94360,7 +94384,7 @@ - confidence_score: 0 - !!omap - id: "MAR08775" - - name: "" + - name: "glycolaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01997c: -1 - MAM01998c: 1 @@ -94380,7 +94404,7 @@ - confidence_score: 0 - !!omap - id: "MAR08777" - - name: "" + - name: "hydroxypyruvate carboxy-lyase (glycolaldehyde-forming)" - metabolites: !!omap - MAM01596m: 1 - MAM01997m: 1 @@ -94398,7 +94422,7 @@ - confidence_score: 0 - !!omap - id: "MAR08778" - - name: "" + - name: "glycolaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01997m: -1 - MAM01998m: 1 @@ -94418,7 +94442,7 @@ - confidence_score: 0 - !!omap - id: "MAR08779" - - name: "" + - name: "glycolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01998m: 1 - MAM02007m: -1 @@ -94457,7 +94481,7 @@ - confidence_score: 0 - !!omap - id: "MAR08781" - - name: "" + - name: "ATP:(R)-glycerate 2-phosphotransferase" - metabolites: !!omap - MAM00674c: 1 - MAM01285c: 1 @@ -94476,7 +94500,7 @@ - confidence_score: 0 - !!omap - id: "MAR08782" - - name: "" + - name: "D-Glycerate:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01982c: 1 - MAM02039c: -1 @@ -94495,7 +94519,7 @@ - confidence_score: 0 - !!omap - id: "MAR03975" - - name: "" + - name: "diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039r: 1 - MAM02040r: -1 @@ -94513,7 +94537,7 @@ - confidence_score: 0 - !!omap - id: "MAR03977" - - name: "" + - name: "diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -94531,7 +94555,7 @@ - confidence_score: 0 - !!omap - id: "MAR03979" - - name: "" + - name: "diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039x: 1 - MAM02040x: -1 @@ -94567,7 +94591,7 @@ - confidence_score: 0 - !!omap - id: "MAR06912" - - name: "" + - name: "diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039m: 1 - MAM02040m: -1 @@ -94585,7 +94609,7 @@ - confidence_score: 0 - !!omap - id: "MAR06914" - - name: "" + - name: "ferrocytochrome-c:oxygen oxidoreductase" - metabolites: !!omap - MAM01824m: 4 - MAM01826m: -4 @@ -94605,7 +94629,7 @@ - confidence_score: 2 - !!omap - id: "MAR06916" - - name: "" + - name: "ATP phosphohydrolase" - metabolites: !!omap - MAM01285m: -1 - MAM01371m: 1 @@ -94645,7 +94669,7 @@ - confidence_score: 2 - !!omap - id: "MAR06921" - - name: "" + - name: "NADH:ubiquinone oxidoreductase" - metabolites: !!omap - MAM02039i: 4 - MAM02039m: -5 @@ -94665,7 +94689,7 @@ - confidence_score: 2 - !!omap - id: "MAR03960" - - name: "" + - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap - MAM02039c: -2 - MAM02041c: 1 @@ -94683,7 +94707,7 @@ - confidence_score: 0 - !!omap - id: "MAR03980" - - name: "" + - name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02040c: 2 - MAM02041c: -2 @@ -94700,7 +94724,7 @@ - confidence_score: 0 - !!omap - id: "MAR03982" - - name: "" + - name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02040m: 2 - MAM02041m: -2 @@ -94717,7 +94741,7 @@ - confidence_score: 0 - !!omap - id: "MAR04767" - - name: "" + - name: "bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase" - metabolites: !!omap - MAM01396r: -1 - MAM01397r: -1 @@ -94750,7 +94774,7 @@ - confidence_score: 0 - !!omap - id: "MAR08409" - - name: "" + - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap - MAM02039e: -2 - MAM02041e: 1 @@ -94768,7 +94792,7 @@ - confidence_score: 0 - !!omap - id: "MAR08410" - - name: "" + - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap - MAM02039m: -2 - MAM02041m: 1 @@ -94786,7 +94810,7 @@ - confidence_score: 0 - !!omap - id: "MAR08413" - - name: "" + - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap - MAM02039n: -2 - MAM02041n: 1 @@ -94804,7 +94828,7 @@ - confidence_score: 0 - !!omap - id: "MAR08415" - - name: "" + - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap - MAM02039x: -2 - MAM02041x: 1 @@ -94822,7 +94846,7 @@ - confidence_score: 0 - !!omap - id: "MAR00156" - - name: "" + - name: "Butanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01371c: 1 @@ -95122,7 +95146,7 @@ - confidence_score: 0 - !!omap - id: "MAR00217" - - name: "" + - name: "Palmitate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01371c: 1 @@ -96002,7 +96026,7 @@ - confidence_score: 0 - !!omap - id: "MAR00409" - - name: "" + - name: "Arachidonate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01362c: 1 @@ -96302,7 +96326,7 @@ - confidence_score: 0 - !!omap - id: "MAR02949" - - name: "" + - name: "Palmitate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334r: -1 - MAM01371r: 1 @@ -97122,7 +97146,7 @@ - confidence_score: 0 - !!omap - id: "MAR02996" - - name: "" + - name: "Arachidonate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334r: -1 - MAM01362r: 1 @@ -97262,7 +97286,7 @@ - confidence_score: 0 - !!omap - id: "MAR02152" - - name: "" + - name: "Acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM01254c: 1 @@ -97282,7 +97306,7 @@ - confidence_score: 0 - !!omap - id: "MAR02153" - - name: "" + - name: "(3R)-3-hydroxybutanoyl-[acyl-carrier protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00158c: 1 - MAM01254c: -1 @@ -97301,7 +97325,7 @@ - confidence_score: 0 - !!omap - id: "MAR02154" - - name: "" + - name: "(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00158c: -1 - MAM01409c: 1 @@ -97318,7 +97342,7 @@ - confidence_score: 0 - !!omap - id: "MAR02155" - - name: "" + - name: "butyryl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM01409c: -1 - MAM01411c: 1 @@ -97337,7 +97361,7 @@ - confidence_score: 0 - !!omap - id: "MAR02156" - - name: "" + - name: "butyryl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00881c: 1 @@ -97357,7 +97381,7 @@ - confidence_score: 0 - !!omap - id: "MAR02157" - - name: "" + - name: "(3R)-3-hydroxyhexanoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00881c: -1 - MAM01635c: 1 @@ -97376,7 +97400,7 @@ - confidence_score: 0 - !!omap - id: "MAR02158" - - name: "" + - name: "(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00052c: 1 - MAM01635c: -1 @@ -97393,7 +97417,7 @@ - confidence_score: 0 - !!omap - id: "MAR02159" - - name: "" + - name: "hexanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00052c: -1 - MAM02039c: -1 @@ -97412,7 +97436,7 @@ - confidence_score: 0 - !!omap - id: "MAR02160" - - name: "" + - name: "hexanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00891c: 1 @@ -97432,7 +97456,7 @@ - confidence_score: 0 - !!omap - id: "MAR02161" - - name: "" + - name: "(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00161c: 1 - MAM00891c: -1 @@ -97451,7 +97475,7 @@ - confidence_score: 0 - !!omap - id: "MAR02162" - - name: "" + - name: "(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00058c: 1 - MAM00161c: -1 @@ -97468,7 +97492,7 @@ - confidence_score: 0 - !!omap - id: "MAR02163" - - name: "" + - name: "octanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00058c: -1 - MAM02039c: -1 @@ -97487,7 +97511,7 @@ - confidence_score: 0 - !!omap - id: "MAR02164" - - name: "" + - name: "Octanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00857c: 1 @@ -97507,7 +97531,7 @@ - confidence_score: 0 - !!omap - id: "MAR02165" - - name: "" + - name: "(3R)-3-hydroxydecanoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00160c: 1 - MAM00857c: -1 @@ -97526,7 +97550,7 @@ - confidence_score: 0 - !!omap - id: "MAR02166" - - name: "" + - name: "(3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00038c: 1 - MAM00160c: -1 @@ -97543,7 +97567,7 @@ - confidence_score: 0 - !!omap - id: "MAR02167" - - name: "" + - name: "decanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00038c: -1 - MAM01649c: 1 @@ -97562,7 +97586,7 @@ - confidence_score: 0 - !!omap - id: "MAR02168" - - name: "" + - name: "Decanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00867c: 1 @@ -97582,7 +97606,7 @@ - confidence_score: 0 - !!omap - id: "MAR02169" - - name: "" + - name: "(3R)-3-hydroxydodecanoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00867c: -1 - MAM01634c: 1 @@ -97601,7 +97625,7 @@ - confidence_score: 0 - !!omap - id: "MAR02170" - - name: "" + - name: "(3R)-3-hydroxydodecanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00041c: 1 - MAM01634c: -1 @@ -97618,7 +97642,7 @@ - confidence_score: 0 - !!omap - id: "MAR02171" - - name: "" + - name: "dodecanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00041c: -1 - MAM01728c: 1 @@ -97637,7 +97661,7 @@ - confidence_score: 0 - !!omap - id: "MAR02173" - - name: "" + - name: "dodecanoyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00905c: 1 @@ -97657,7 +97681,7 @@ - confidence_score: 0 - !!omap - id: "MAR02174" - - name: "" + - name: "(3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00905c: -1 - MAM02039c: -1 @@ -97676,7 +97700,7 @@ - confidence_score: 0 - !!omap - id: "MAR02175" - - name: "" + - name: "(3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00065c: 1 - MAM02040c: 1 @@ -97693,7 +97717,7 @@ - confidence_score: 0 - !!omap - id: "MAR02176" - - name: "" + - name: "tetradecanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00065c: -1 - MAM02039c: -1 @@ -97712,7 +97736,7 @@ - confidence_score: 0 - !!omap - id: "MAR02178" - - name: "" + - name: "Tetradecanoyl-[acyl-carrier protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" - metabolites: !!omap - MAM00184c: 1 - MAM00880c: 1 @@ -97732,7 +97756,7 @@ - confidence_score: 0 - !!omap - id: "MAR02179" - - name: "" + - name: "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein]:NADP+ oxidoreductase" - metabolites: !!omap - MAM00162c: 1 - MAM00880c: -1 @@ -97751,7 +97775,7 @@ - confidence_score: 0 - !!omap - id: "MAR02180" - - name: "" + - name: "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase" - metabolites: !!omap - MAM00050c: 1 - MAM00162c: -1 @@ -97768,7 +97792,7 @@ - confidence_score: 0 - !!omap - id: "MAR02181" - - name: "" + - name: "hexadecanoyl-[acp]:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00050c: -1 - MAM02039c: -1 @@ -97787,7 +97811,7 @@ - confidence_score: 0 - !!omap - id: "MAR04156" - - name: "" + - name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01261c: -1 - MAM01285c: 1 @@ -97808,7 +97832,7 @@ - confidence_score: 0 - !!omap - id: "MAR04295" - - name: "" + - name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01261m: -1 - MAM01285m: 1 @@ -98992,7 +99016,7 @@ - confidence_score: 0 - !!omap - id: "MAR02191" - - name: "" + - name: "3-hydroxyoctadecanoyl-CoA:NADP+ oxidoreductase" - metabolites: !!omap - MAM00793c: 1 - MAM00890c: -1 @@ -99028,7 +99052,7 @@ - confidence_score: 0 - !!omap - id: "MAR02194" - - name: "" + - name: "octadecanoyl-CoA:NADP+ trans-2-oxidoreductase" - metabolites: !!omap - MAM00057c: -1 - MAM02039c: -1 @@ -99866,7 +99890,7 @@ - confidence_score: 0 - !!omap - id: "MAR00709" - - name: "" + - name: "palmitoyl-CoA hydrolase" - metabolites: !!omap - MAM01597x: 1 - MAM02039x: 1 @@ -99885,7 +99909,7 @@ - confidence_score: 0 - !!omap - id: "MAR02150" - - name: "" + - name: "acetyl-CoA:[acyl-carrier-protein] S-acetyltransferase" - metabolites: !!omap - MAM00184c: -1 - MAM01258c: 1 @@ -99903,7 +99927,7 @@ - confidence_score: 0 - !!omap - id: "MAR02151" - - name: "" + - name: "Malonyl-CoA:[acyl-carrier-protein] S-malonyltransferase" - metabolites: !!omap - MAM00184c: -1 - MAM01597c: 1 @@ -99921,7 +99945,7 @@ - confidence_score: 0 - !!omap - id: "MAR02172" - - name: "" + - name: "dodecanoyl-[acyl-carrier-protein] hydrolase" - metabolites: !!omap - MAM00184c: 1 - MAM01728c: -1 @@ -99940,7 +99964,7 @@ - confidence_score: 0 - !!omap - id: "MAR02177" - - name: "" + - name: "tetradecanoyl-[acyl-carrier protein] hydrolase" - metabolites: !!omap - MAM00184c: 1 - MAM02039c: 1 @@ -99959,7 +99983,7 @@ - confidence_score: 0 - !!omap - id: "MAR02182" - - name: "" + - name: "hexadecanoyl-[acyl-carrier protein] hydrolase" - metabolites: !!omap - MAM00184c: 1 - MAM02039c: 1 @@ -100035,7 +100059,7 @@ - confidence_score: 0 - !!omap - id: "MAR02437" - - name: "" + - name: "linoleate:oxygen 9-oxidoreductase" - metabolites: !!omap - MAM01217c: 1 - MAM02387c: -1 @@ -100072,7 +100096,7 @@ - confidence_score: 0 - !!omap - id: "MAR02439" - - name: "" + - name: "linoleate:oxygen 11S-oxidoreductase" - metabolites: !!omap - MAM00298c: 1 - MAM02387c: -1 @@ -100089,7 +100113,7 @@ - confidence_score: 0 - !!omap - id: "MAR02440" - - name: "" + - name: "Linoleate:oxygen 13-oxidoreductase" - metabolites: !!omap - MAM00337c: 1 - MAM02387c: -1 @@ -100442,7 +100466,7 @@ - confidence_score: 0 - !!omap - id: "MAR02459" - - name: "" + - name: "9(10)-EpOME hydrolase" - metabolites: !!omap - MAM01216c: -1 - MAM01220c: 1 @@ -100459,7 +100483,7 @@ - confidence_score: 0 - !!omap - id: "MAR02460" - - name: "" + - name: "9(10)-EpOME hydrolase" - metabolites: !!omap - MAM01216r: -1 - MAM01220r: 1 @@ -100744,7 +100768,7 @@ - confidence_score: 0 - !!omap - id: "MAR06401" - - name: "" + - name: "lipoyl-[acp]:protein N6-lipoyltransferase" - metabolites: !!omap - MAM00184c: 1 - MAM00209c: 1 @@ -100762,7 +100786,7 @@ - confidence_score: 0 - !!omap - id: "MAR06402" - - name: "" + - name: "octanoyl-[acp]:protein N6-octanoyltransferase" - metabolites: !!omap - MAM00184c: 1 - MAM00210c: 1 @@ -100780,7 +100804,7 @@ - confidence_score: 0 - !!omap - id: "MAR06403" - - name: "" + - name: "[protein]-N6-(octanoyl)-L-lysine:an [Fe-S] cluster scaffold protein carrying a [4Fe-4S]2+ cluster sulfurtransferase" - metabolites: !!omap - MAM00209c: 1 - MAM00210c: -1 @@ -100805,7 +100829,7 @@ - confidence_score: 0 - !!omap - id: "MAR06404" - - name: "" + - name: "protein N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase" - metabolites: !!omap - MAM00208c: 1 - MAM00209c: -1 @@ -101187,7 +101211,7 @@ - confidence_score: 0 - !!omap - id: "MAR02513" - - name: "" + - name: "(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00095x: 1 - MAM00814x: -1 @@ -102214,7 +102238,7 @@ - confidence_score: 0 - !!omap - id: "MAR02368" - - name: "" + - name: "linoleoyl-CoA,ferrocytochrome b5:oxygen oxidoreductase (6,7 cis-dehydrogenating)" - metabolites: !!omap - MAM01934c: 1 - MAM02039c: -1 @@ -102577,7 +102601,7 @@ - confidence_score: 0 - !!omap - id: "MAR02411" - - name: "" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00093x: 1 - MAM00853x: -1 @@ -103524,7 +103548,7 @@ - confidence_score: 0 - !!omap - id: "MAR00941" - - name: "" + - name: "Arachidonic acid:oxygen 1-oxidoreductase" - metabolites: !!omap - MAM00591c: 1 - MAM01362c: -1 @@ -103606,7 +103630,7 @@ - confidence_score: 0 - !!omap - id: "MAR00945" - - name: "" + - name: "5,6-EET hydrolase" - metabolites: !!omap - MAM01051c: 1 - MAM01054c: -1 @@ -103684,7 +103708,7 @@ - confidence_score: 0 - !!omap - id: "MAR00949" - - name: "" + - name: "8,9-EET hydrolase" - metabolites: !!omap - MAM01208c: 1 - MAM01209c: -1 @@ -103742,7 +103766,7 @@ - confidence_score: 0 - !!omap - id: "MAR00953" - - name: "" + - name: "11,12-EET hydrolase" - metabolites: !!omap - MAM00277c: 1 - MAM00279c: -1 @@ -103820,7 +103844,7 @@ - confidence_score: 0 - !!omap - id: "MAR00957" - - name: "" + - name: "14,15-EET hydrolase" - metabolites: !!omap - MAM00364c: 1 - MAM00366c: -1 @@ -103837,7 +103861,7 @@ - confidence_score: 0 - !!omap - id: "MAR00958" - - name: "" + - name: "Arachidonate:oxygen 5-oxidoreductase" - metabolites: !!omap - MAM01042c: 1 - MAM01362c: -1 @@ -103854,7 +103878,7 @@ - confidence_score: 0 - !!omap - id: "MAR00959" - - name: "" + - name: "arachidonate:oxygen 5-oxidoreductase" - metabolites: !!omap - MAM01042c: -1 - MAM02040c: 1 @@ -103871,7 +103895,7 @@ - confidence_score: 0 - !!omap - id: "MAR00960" - - name: "" + - name: "Glutathione: 5-HPETE oxidoreductase" - metabolites: !!omap - MAM01040c: 1 - MAM01042c: -1 @@ -103909,7 +103933,7 @@ - confidence_score: 0 - !!omap - id: "MAR00963" - - name: "" + - name: "Glutathione: 5-HPETE oxidoreductase" - metabolites: !!omap - MAM01040m: 1 - MAM01042m: -1 @@ -104100,7 +104124,7 @@ - confidence_score: 0 - !!omap - id: "MAR00983" - - name: "" + - name: "arachidonate:oxygen 15-oxidoreductase" - metabolites: !!omap - MAM00380c: 1 - MAM01362c: -1 @@ -104117,7 +104141,7 @@ - confidence_score: 0 - !!omap - id: "MAR00985" - - name: "" + - name: "arachidonate:oxygen 15-oxidoreductase" - metabolites: !!omap - MAM00380n: 1 - MAM01362n: -1 @@ -104134,7 +104158,7 @@ - confidence_score: 0 - !!omap - id: "MAR00986" - - name: "" + - name: "arachidonate:oxygen 15-oxidoreductase" - metabolites: !!omap - MAM00380r: 1 - MAM01362r: -1 @@ -104151,7 +104175,7 @@ - confidence_score: 0 - !!omap - id: "MAR00987" - - name: "" + - name: "arachidonate:oxygen 15-oxidoreductase" - metabolites: !!omap - MAM00380x: 1 - MAM01362x: -1 @@ -104168,7 +104192,7 @@ - confidence_score: 0 - !!omap - id: "MAR00988" - - name: "" + - name: "Glutathione: 15-HPETE oxidoreductase" - metabolites: !!omap - MAM00377c: -1 - MAM00380c: 1 @@ -104187,7 +104211,7 @@ - confidence_score: 0 - !!omap - id: "MAR00989" - - name: "" + - name: "(15S)-15-Hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NADP+ 15-oxidoreductase" - metabolites: !!omap - MAM00377c: -1 - MAM00393c: 1 @@ -104206,7 +104230,7 @@ - confidence_score: 0 - !!omap - id: "MAR00990" - - name: "" + - name: "(15S)-15-Hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD+ 15-oxidoreductase" - metabolites: !!omap - MAM00377c: -1 - MAM00393c: 1 @@ -104788,7 +104812,7 @@ - confidence_score: 0 - !!omap - id: "MAR01029" - - name: "" + - name: "arachidonate:oxygen 12-oxidoreductase" - metabolites: !!omap - MAM00309c: 1 - MAM01362c: -1 @@ -104805,7 +104829,7 @@ - confidence_score: 0 - !!omap - id: "MAR01030" - - name: "" + - name: "arachidonate:oxygen 12-oxidoreductase" - metabolites: !!omap - MAM00309e: 1 - MAM01362e: -1 @@ -104822,7 +104846,7 @@ - confidence_score: 0 - !!omap - id: "MAR01033" - - name: "" + - name: "arachidonate:oxygen 12-oxidoreductase" - metabolites: !!omap - MAM00309r: 1 - MAM01362r: -1 @@ -104839,7 +104863,7 @@ - confidence_score: 0 - !!omap - id: "MAR01034" - - name: "" + - name: "arachidonate:oxygen 12-oxidoreductase" - metabolites: !!omap - MAM00309x: 1 - MAM01362x: -1 @@ -104913,7 +104937,7 @@ - confidence_score: 0 - !!omap - id: "MAR01041" - - name: "" + - name: "12-HPETE hydroxymutase" - metabolites: !!omap - MAM00309c: -1 - MAM02098c: 1 @@ -104929,7 +104953,7 @@ - confidence_score: 0 - !!omap - id: "MAR01042" - - name: "" + - name: "Hepoxilin B3 hydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02098c: -1 @@ -104946,7 +104970,7 @@ - confidence_score: 0 - !!omap - id: "MAR01043" - - name: "" + - name: "12-HPETE hydroxymutase" - metabolites: !!omap - MAM00309c: -1 - MAM02096c: 1 @@ -104962,7 +104986,7 @@ - confidence_score: 0 - !!omap - id: "MAR01045" - - name: "" + - name: "12-HPETE hydroxymutase" - metabolites: !!omap - MAM00309e: -1 - MAM02096e: 1 @@ -104978,7 +105002,7 @@ - confidence_score: 0 - !!omap - id: "MAR01048" - - name: "" + - name: "12-HPETE hydroxymutase" - metabolites: !!omap - MAM00309x: -1 - MAM02096x: 1 @@ -104994,7 +105018,7 @@ - confidence_score: 0 - !!omap - id: "MAR01049" - - name: "" + - name: "12-HPETE hydroxymutase" - metabolites: !!omap - MAM00309r: -1 - MAM02096r: 1 @@ -105154,7 +105178,7 @@ - confidence_score: 0 - !!omap - id: "MAR01062" - - name: "" + - name: "Arachidonate:oxygen 8-oxidoreductase" - metabolites: !!omap - MAM01203c: 1 - MAM01362c: -1 @@ -105190,7 +105214,7 @@ - confidence_score: 0 - !!omap - id: "MAR01064" - - name: "" + - name: "Arachidonate: oxygen 11-oxidoreductase" - metabolites: !!omap - MAM00005c: 1 - MAM01362c: -1 @@ -105522,7 +105546,7 @@ - confidence_score: 0 - !!omap - id: "MAR01080" - - name: "" + - name: "(7E,9E,11Z,14Z)-(5S,6S)-5,6-Epoxyicosa-7,9,11,14-tetraenoate hydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02362c: -1 @@ -105539,7 +105563,7 @@ - confidence_score: 0 - !!omap - id: "MAR01081" - - name: "" + - name: "(7E,9E,11Z,14Z)-(5S,6S)-5,6-Epoxyicosa-7,9,11,14-tetraenoate:glutathione leukotriene-transferase (epoxide-ring-opening)" - metabolites: !!omap - MAM02026c: -1 - MAM02362c: -1 @@ -106219,7 +106243,7 @@ - confidence_score: 0 - !!omap - id: "MAR01126" - - name: "" + - name: "(6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00599c: 1 - MAM02039c: -1 @@ -106240,7 +106264,7 @@ - confidence_score: 0 - !!omap - id: "MAR01127" - - name: "" + - name: "(6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00599m: 1 - MAM02039m: -1 @@ -106261,7 +106285,7 @@ - confidence_score: 0 - !!omap - id: "MAR01128" - - name: "" + - name: "(6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00599r: 1 - MAM02039r: -1 @@ -106416,7 +106440,7 @@ - confidence_score: 0 - !!omap - id: "MAR01137" - - name: "" + - name: "(6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00588c: 1 - MAM00599c: -1 @@ -106437,7 +106461,7 @@ - confidence_score: 0 - !!omap - id: "MAR01138" - - name: "" + - name: "(6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00588r: 1 - MAM00599r: -1 @@ -108393,7 +108417,7 @@ - confidence_score: 0 - !!omap - id: "MAR01287" - - name: "" + - name: "(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)" - metabolites: !!omap - MAM00596x: 1 - MAM02039x: -1 @@ -108730,7 +108754,7 @@ - confidence_score: 0 - !!omap - id: "MAR04796" - - name: "" + - name: "leukotriene-C4 hydrolase" - metabolites: !!omap - MAM01974c: 1 - MAM02040c: -1 @@ -108748,7 +108772,7 @@ - confidence_score: 0 - !!omap - id: "MAR08545" - - name: "" + - name: "Arachidonate: oxygen 12-oxidoreductase" - metabolites: !!omap - MAM00306c: 1 - MAM01362c: -1 @@ -108765,7 +108789,7 @@ - confidence_score: 0 - !!omap - id: "MAR08546" - - name: "" + - name: "(13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NADP+ 15-oxidoreductase" - metabolites: !!omap - MAM00013c: -1 - MAM02039c: -1 @@ -108802,7 +108826,7 @@ - confidence_score: 0 - !!omap - id: "MAR08548" - - name: "" + - name: "leukotriene-C4 hydrolase" - metabolites: !!omap - MAM01974r: 1 - MAM02040r: -1 @@ -108838,7 +108862,7 @@ - confidence_score: 0 - !!omap - id: "MAR08550" - - name: "" + - name: "(7E,9E,11Z,14Z)-(5S,6S)-5,6-Epoxyicosa-7,9,11,14-tetraenoate:glutathione leukotriene-transferase (epoxide-ring-opening)" - metabolites: !!omap - MAM02026r: -1 - MAM02362r: -1 @@ -108978,7 +109002,7 @@ - confidence_score: 0 - !!omap - id: "MAR08559" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13- dienoate D-isomerase" - metabolites: !!omap - MAM02783r: -1 - MAM02794r: 1 @@ -108994,7 +109018,7 @@ - confidence_score: 0 - !!omap - id: "MAR08560" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13- dienoate E-isomerase" - metabolites: !!omap - MAM02786r: -1 - MAM02794r: 1 @@ -109181,7 +109205,7 @@ - confidence_score: 0 - !!omap - id: "MAR00223" - - name: "" + - name: "palmitoyl-CoA hydrolase" - metabolites: !!omap - MAM01597c: 1 - MAM02039c: 1 @@ -109295,7 +109319,7 @@ - confidence_score: 0 - !!omap - id: "MAR00250" - - name: "" + - name: "stearoyl-CoA hydrolase" - metabolites: !!omap - MAM01597c: 1 - MAM02039c: 1 @@ -109447,7 +109471,7 @@ - confidence_score: 0 - !!omap - id: "MAR00284" - - name: "" + - name: "Icosanoyl-CoA hydrolase" - metabolites: !!omap - MAM01597c: 1 - MAM01771c: 1 @@ -109789,7 +109813,7 @@ - confidence_score: 0 - !!omap - id: "MAR00362" - - name: "" + - name: "(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA hydrolase" - metabolites: !!omap - MAM00103c: -1 - MAM01597c: 1 @@ -109960,7 +109984,7 @@ - confidence_score: 0 - !!omap - id: "MAR00398" - - name: "" + - name: "Linoleoyl-CoA hydrolase" - metabolites: !!omap - MAM01597c: 1 - MAM02039c: 1 @@ -110188,7 +110212,7 @@ - confidence_score: 0 - !!omap - id: "MAR03475" - - name: "" + - name: "Acetyl-CoA hydrolase" - metabolites: !!omap - MAM01252x: 1 - MAM01261x: -1 @@ -110207,7 +110231,7 @@ - confidence_score: 0 - !!omap - id: "MAR03476" - - name: "" + - name: "Formyl-CoA hydrolase" - metabolites: !!omap - MAM01597x: 1 - MAM01833x: 1 @@ -110226,7 +110250,7 @@ - confidence_score: 0 - !!omap - id: "MAR03477" - - name: "" + - name: "Formyl-CoA hydrolase" - metabolites: !!omap - MAM01597c: 1 - MAM01833c: 1 @@ -110263,7 +110287,7 @@ - confidence_score: 0 - !!omap - id: "MAR02591" - - name: "" + - name: "Acetyl-CoA:carnitine O-acetyltransferase" - metabolites: !!omap - MAM01261c: 1 - MAM01597c: -1 @@ -110299,7 +110323,7 @@ - confidence_score: 0 - !!omap - id: "MAR02599" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02348c: 1 @@ -110443,7 +110467,7 @@ - confidence_score: 0 - !!omap - id: "MAR02626" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02348c: 1 @@ -110479,7 +110503,7 @@ - confidence_score: 0 - !!omap - id: "MAR02636" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02348c: 1 @@ -111037,7 +111061,7 @@ - confidence_score: 0 - !!omap - id: "MAR02742" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02348c: 1 @@ -111091,7 +111115,7 @@ - confidence_score: 0 - !!omap - id: "MAR02755" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01363c: -1 - MAM01364c: 1 @@ -111218,7 +111242,7 @@ - confidence_score: 0 - !!omap - id: "MAR03032" - - name: "" + - name: "Octanoyl-CoA:L-carnitine O-octanoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02348c: 1 @@ -111326,7 +111350,7 @@ - confidence_score: 0 - !!omap - id: "MAR00163" - - name: "" + - name: "Octanoyl-CoA:L-carnitine O-octanoyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM02348m: 1 @@ -111362,7 +111386,7 @@ - confidence_score: 0 - !!omap - id: "MAR02593" - - name: "" + - name: "Acetyl-CoA:carnitine O-acetyltransferase" - metabolites: !!omap - MAM01261m: 1 - MAM01597m: -1 @@ -111434,7 +111458,7 @@ - confidence_score: 0 - !!omap - id: "MAR02601" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM02348m: 1 @@ -111722,7 +111746,7 @@ - confidence_score: 0 - !!omap - id: "MAR02630" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM02348m: 1 @@ -111794,7 +111818,7 @@ - confidence_score: 0 - !!omap - id: "MAR02640" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597m: -1 - MAM02348m: 1 @@ -113018,7 +113042,7 @@ - confidence_score: 0 - !!omap - id: "MAR02758" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01363m: -1 - MAM01364m: 1 @@ -113307,7 +113331,7 @@ - confidence_score: 0 - !!omap - id: "MAR03028" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597x: -1 - MAM02348x: 1 @@ -113343,7 +113367,7 @@ - confidence_score: 0 - !!omap - id: "MAR03030" - - name: "" + - name: "Acetyl-CoA:carnitine O-acetyltransferase" - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 @@ -113379,7 +113403,7 @@ - confidence_score: 0 - !!omap - id: "MAR03034" - - name: "" + - name: "Octanoyl-CoA:L-carnitine O-octanoyltransferase" - metabolites: !!omap - MAM01597x: -1 - MAM02348x: 1 @@ -113451,7 +113475,7 @@ - confidence_score: 0 - !!omap - id: "MAR02780" - - name: "" + - name: "Acetyl-CoA:carnitine O-acetyltransferase" - metabolites: !!omap - MAM01261r: 1 - MAM01597r: -1 @@ -113487,7 +113511,7 @@ - confidence_score: 0 - !!omap - id: "MAR02785" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597r: -1 - MAM02348r: 1 @@ -113775,7 +113799,7 @@ - confidence_score: 0 - !!omap - id: "MAR02803" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597r: -1 - MAM02348r: 1 @@ -113847,7 +113871,7 @@ - confidence_score: 0 - !!omap - id: "MAR02809" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597r: -1 - MAM02348r: 1 @@ -114999,7 +115023,7 @@ - confidence_score: 0 - !!omap - id: "MAR02882" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01597r: -1 - MAM02348r: 1 @@ -115107,7 +115131,7 @@ - confidence_score: 0 - !!omap - id: "MAR02894" - - name: "" + - name: "palmitoyl-CoA:L-carnitine O-palmitoyltransferase" - metabolites: !!omap - MAM01363r: -1 - MAM01364r: 1 @@ -115809,7 +115833,7 @@ - confidence_score: 0 - !!omap - id: "MAR00002" - - name: "" + - name: "triacylglycerol acylhydrolase" - metabolites: !!omap - MAM00234e: 1 - MAM01807e: 1 @@ -115827,7 +115851,7 @@ - confidence_score: 0 - !!omap - id: "MAR00003" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00234e: -1 - MAM00503e: 1 @@ -115845,7 +115869,7 @@ - confidence_score: 0 - !!omap - id: "MAR00005" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00503c: -1 - MAM01807c: 1 @@ -115863,7 +115887,7 @@ - confidence_score: 0 - !!omap - id: "MAR00449" - - name: "" + - name: "sn-Glycerol-3-phosphate:(acceptor) 2-oxidoreductase" - metabolites: !!omap - MAM01690m: 1 - MAM01802m: -1 @@ -115881,7 +115905,7 @@ - confidence_score: 0 - !!omap - id: "MAR00604" - - name: "" + - name: "ATP:1,2-diacylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00240c: -1 - MAM01285c: 1 @@ -115900,7 +115924,7 @@ - confidence_score: 0 - !!omap - id: "MAR00605" - - name: "" + - name: "acyl-CoA:1,2-diacyl-sn-glycerol O-acyltransferase" - metabolites: !!omap - MAM00240c: -1 - MAM01597c: 1 @@ -115918,7 +115942,7 @@ - confidence_score: 0 - !!omap - id: "MAR00665" - - name: "" + - name: "triacylglycerol acylhydrolase" - metabolites: !!omap - MAM00240c: 1 - MAM02039c: 1 @@ -115937,7 +115961,7 @@ - confidence_score: 0 - !!omap - id: "MAR00667" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00240c: -1 - MAM00509c: 1 @@ -115956,7 +115980,7 @@ - confidence_score: 0 - !!omap - id: "MAR00668" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00237c: -1 - MAM00506c: 1 @@ -115975,7 +115999,7 @@ - confidence_score: 0 - !!omap - id: "MAR00669" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00235c: -1 - MAM00504c: 1 @@ -115994,7 +116018,7 @@ - confidence_score: 0 - !!omap - id: "MAR00670" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00236c: -1 - MAM00505c: 1 @@ -116013,7 +116037,7 @@ - confidence_score: 0 - !!omap - id: "MAR00671" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00238c: -1 - MAM00507c: 1 @@ -116032,7 +116056,7 @@ - confidence_score: 0 - !!omap - id: "MAR00672" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00239c: -1 - MAM00508c: 1 @@ -116051,7 +116075,7 @@ - confidence_score: 0 - !!omap - id: "MAR00679" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00509c: -1 - MAM01983c: 1 @@ -116070,7 +116094,7 @@ - confidence_score: 0 - !!omap - id: "MAR00680" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00504c: -1 - MAM01983c: 1 @@ -116089,7 +116113,7 @@ - confidence_score: 0 - !!omap - id: "MAR00681" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00505c: -1 - MAM01983c: 1 @@ -116108,7 +116132,7 @@ - confidence_score: 0 - !!omap - id: "MAR00682" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00507c: -1 - MAM01983c: 1 @@ -116127,7 +116151,7 @@ - confidence_score: 0 - !!omap - id: "MAR00683" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00506c: -1 - MAM01983c: 1 @@ -116146,7 +116170,7 @@ - confidence_score: 0 - !!omap - id: "MAR00684" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00508c: -1 - MAM01983c: 1 @@ -116165,7 +116189,7 @@ - confidence_score: 0 - !!omap - id: "MAR07588" - - name: "" + - name: "Acyl-CoA:glycerone-phosphate O-acyltransferase" - metabolites: !!omap - MAM01278c: 1 - MAM01597c: 1 @@ -116630,7 +116654,7 @@ - confidence_score: 0 - !!omap - id: "MAR03079" - - name: "" + - name: "(S)-3-Hydroxyhexadecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00051x: -1 - MAM00175x: 1 @@ -116647,7 +116671,7 @@ - confidence_score: 0 - !!omap - id: "MAR03080" - - name: "" + - name: "(S)-3-Hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00175x: -1 - MAM00895x: 1 @@ -116666,7 +116690,7 @@ - confidence_score: 0 - !!omap - id: "MAR03081" - - name: "" + - name: "myristoyl-CoA:acetylCoA C-myristoyltransferase" - metabolites: !!omap - MAM00895x: -1 - MAM01261x: 1 @@ -116702,7 +116726,7 @@ - confidence_score: 0 - !!omap - id: "MAR03083" - - name: "" + - name: "(S)-3-Hydroxytetradecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00066x: -1 - MAM00178x: 1 @@ -116719,7 +116743,7 @@ - confidence_score: 0 - !!omap - id: "MAR03084" - - name: "" + - name: "(S)-3-Hydroxytetradecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00178x: -1 - MAM00906x: 1 @@ -116738,7 +116762,7 @@ - confidence_score: 0 - !!omap - id: "MAR03085" - - name: "" + - name: "Lauroyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00906x: -1 - MAM01261x: 1 @@ -116774,7 +116798,7 @@ - confidence_score: 0 - !!omap - id: "MAR03087" - - name: "" + - name: "(S)-3-Hydroxydodecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00042x: -1 - MAM00174x: 1 @@ -116791,7 +116815,7 @@ - confidence_score: 0 - !!omap - id: "MAR03088" - - name: "" + - name: "(S)-3-hydroxydodecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00174x: -1 - MAM00868x: 1 @@ -116810,7 +116834,7 @@ - confidence_score: 0 - !!omap - id: "MAR03089" - - name: "" + - name: "Decanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00868x: -1 - MAM01261x: 1 @@ -116846,7 +116870,7 @@ - confidence_score: 0 - !!omap - id: "MAR03091" - - name: "" + - name: "(S)-Hydroxydecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00039x: -1 - MAM00181x: 1 @@ -116863,7 +116887,7 @@ - confidence_score: 0 - !!omap - id: "MAR03092" - - name: "" + - name: "(S)-hydroxydecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00181x: -1 - MAM00858x: 1 @@ -116882,7 +116906,7 @@ - confidence_score: 0 - !!omap - id: "MAR03093" - - name: "" + - name: "Octanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00858x: -1 - MAM01261x: 1 @@ -116918,7 +116942,7 @@ - confidence_score: 0 - !!omap - id: "MAR03095" - - name: "" + - name: "(S)-Hydroxyoctanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00059x: -1 - MAM00183x: 1 @@ -116935,7 +116959,7 @@ - confidence_score: 0 - !!omap - id: "MAR03096" - - name: "" + - name: "(S)-hydroxyoctanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00183x: -1 - MAM00892x: 1 @@ -116954,7 +116978,7 @@ - confidence_score: 0 - !!omap - id: "MAR03097" - - name: "" + - name: "Hexanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00892x: -1 - MAM01261x: 1 @@ -116990,7 +117014,7 @@ - confidence_score: 0 - !!omap - id: "MAR03099" - - name: "" + - name: "(S)-Hydroxyhexanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00053x: -1 - MAM00182x: 1 @@ -117007,7 +117031,7 @@ - confidence_score: 0 - !!omap - id: "MAR03100" - - name: "" + - name: "(S)-hydroxyhexanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00182x: -1 - MAM00882x: 1 @@ -117026,7 +117050,7 @@ - confidence_score: 0 - !!omap - id: "MAR03101" - - name: "" + - name: "butanoyl-CoA:acetyl-CoA C-butanoyltransferase" - metabolites: !!omap - MAM00882x: -1 - MAM01261x: 1 @@ -117062,7 +117086,7 @@ - confidence_score: 0 - !!omap - id: "MAR03103" - - name: "" + - name: "(S)-3-hydroxybutanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00173x: 1 - MAM01622x: -1 @@ -117079,7 +117103,7 @@ - confidence_score: 0 - !!omap - id: "MAR03104" - - name: "" + - name: "(S)-3-Hydroxybutanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00173x: -1 - MAM01255x: 1 @@ -117642,7 +117666,7 @@ - confidence_score: 0 - !!omap - id: "MAR03355" - - name: "" + - name: "3-cis-Dodecenoyl-CoA delta3-cis-delta2-trans-isomerase" - metabolites: !!omap - MAM00042x: -1 - MAM00088x: 1 @@ -117834,7 +117858,7 @@ - confidence_score: 0 - !!omap - id: "MAR03480" - - name: "" + - name: "Phytanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01371c: 1 @@ -117870,7 +117894,7 @@ - confidence_score: 0 - !!omap - id: "MAR03482" - - name: "" + - name: "Phytanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334x: -1 - MAM01371x: 1 @@ -117890,7 +117914,7 @@ - confidence_score: 0 - !!omap - id: "MAR03484" - - name: "" + - name: "phytanoyl-CoA, 2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating)" - metabolites: !!omap - MAM00655x: 1 - MAM01306x: -1 @@ -118057,7 +118081,7 @@ - confidence_score: 0 - !!omap - id: "MAR03505" - - name: "" + - name: "4,8,12-trimethyltridecanoyl-CoA:propanoyl-CoA C2-4,8,12-trimethyltridecanoyltransferase" - metabolites: !!omap - MAM00813x: -1 - MAM00948x: 1 @@ -118467,7 +118491,7 @@ - confidence_score: 0 - !!omap - id: "MAR03316" - - name: "" + - name: "cis,cis-3,6-Dodecadienoyl-CoA delta3-cis-delta2-trans-isomerase" - metabolites: !!omap - MAM01575x: -1 - MAM03021x: 1 @@ -118805,7 +118829,7 @@ - confidence_score: 0 - !!omap - id: "MAR03121" - - name: "" + - name: "palmitoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00051m: 1 - MAM01802m: -1 @@ -118823,7 +118847,7 @@ - confidence_score: 0 - !!omap - id: "MAR03122" - - name: "" + - name: "(S)-3-Hydroxyhexadecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00051m: -1 - MAM00175m: 1 @@ -118840,7 +118864,7 @@ - confidence_score: 0 - !!omap - id: "MAR03123" - - name: "" + - name: "(S)-3-Hydroxyhexadecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00175m: -1 - MAM00895m: 1 @@ -118859,7 +118883,7 @@ - confidence_score: 0 - !!omap - id: "MAR03125" - - name: "" + - name: "myristoyl-CoA:acetylCoA C-myristoyltransferase" - metabolites: !!omap - MAM00895m: -1 - MAM01261m: 1 @@ -118877,7 +118901,7 @@ - confidence_score: 0 - !!omap - id: "MAR03128" - - name: "" + - name: "tetradecanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00066m: 1 - MAM01802m: -1 @@ -118895,7 +118919,7 @@ - confidence_score: 0 - !!omap - id: "MAR03129" - - name: "" + - name: "(S)-3-Hydroxytetradecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00066m: -1 - MAM00178m: 1 @@ -118912,7 +118936,7 @@ - confidence_score: 0 - !!omap - id: "MAR03130" - - name: "" + - name: "(S)-3-Hydroxytetradecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00178m: -1 - MAM00906m: 1 @@ -118931,7 +118955,7 @@ - confidence_score: 0 - !!omap - id: "MAR03132" - - name: "" + - name: "Lauroyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00906m: -1 - MAM01261m: 1 @@ -118949,7 +118973,7 @@ - confidence_score: 0 - !!omap - id: "MAR03135" - - name: "" + - name: "lauroyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00042m: 1 - MAM01802m: -1 @@ -118967,7 +118991,7 @@ - confidence_score: 0 - !!omap - id: "MAR03136" - - name: "" + - name: "(S)-3-Hydroxydodecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00042m: -1 - MAM00174m: 1 @@ -118984,7 +119008,7 @@ - confidence_score: 0 - !!omap - id: "MAR03137" - - name: "" + - name: "(S)-3-hydroxydodecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00174m: -1 - MAM00868m: 1 @@ -119003,7 +119027,7 @@ - confidence_score: 0 - !!omap - id: "MAR03139" - - name: "" + - name: "Decanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00868m: -1 - MAM01261m: 1 @@ -119021,7 +119045,7 @@ - confidence_score: 0 - !!omap - id: "MAR03142" - - name: "" + - name: "decanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00039m: 1 - MAM01650m: -1 @@ -119039,7 +119063,7 @@ - confidence_score: 0 - !!omap - id: "MAR03143" - - name: "" + - name: "(S)-Hydroxydecanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00039m: -1 - MAM00181m: 1 @@ -119056,7 +119080,7 @@ - confidence_score: 0 - !!omap - id: "MAR03144" - - name: "" + - name: "(S)-hydroxydecanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00181m: -1 - MAM00858m: 1 @@ -119075,7 +119099,7 @@ - confidence_score: 0 - !!omap - id: "MAR03146" - - name: "" + - name: "Octanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00858m: -1 - MAM01261m: 1 @@ -119093,7 +119117,7 @@ - confidence_score: 0 - !!omap - id: "MAR03149" - - name: "" + - name: "octanoyl-CoA:electron-transfer flavoprotein 2-oxidoreductase" - metabolites: !!omap - MAM00059m: 1 - MAM01802m: -1 @@ -119111,7 +119135,7 @@ - confidence_score: 0 - !!omap - id: "MAR03150" - - name: "" + - name: "(S)-Hydroxyoctanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00059m: -1 - MAM00183m: 1 @@ -119128,7 +119152,7 @@ - confidence_score: 0 - !!omap - id: "MAR03151" - - name: "" + - name: "(S)-hydroxyoctanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00183m: -1 - MAM00892m: 1 @@ -119147,7 +119171,7 @@ - confidence_score: 0 - !!omap - id: "MAR03153" - - name: "" + - name: "Hexanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00892m: -1 - MAM01261m: 1 @@ -119165,7 +119189,7 @@ - confidence_score: 0 - !!omap - id: "MAR03156" - - name: "" + - name: "hexanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - metabolites: !!omap - MAM00053m: 1 - MAM01802m: -1 @@ -119183,7 +119207,7 @@ - confidence_score: 0 - !!omap - id: "MAR03157" - - name: "" + - name: "(S)-Hydroxyhexanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00053m: -1 - MAM00182m: 1 @@ -119200,7 +119224,7 @@ - confidence_score: 0 - !!omap - id: "MAR03158" - - name: "" + - name: "(S)-hydroxyhexanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00182m: -1 - MAM00882m: 1 @@ -119219,7 +119243,7 @@ - confidence_score: 0 - !!omap - id: "MAR03160" - - name: "" + - name: "butanoyl-CoA:acetyl-CoA C-butanoyltransferase" - metabolites: !!omap - MAM00882m: -1 - MAM01261m: 1 @@ -120396,7 +120420,7 @@ - confidence_score: 0 - !!omap - id: "MAR03205" - - name: "" + - name: "acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase" - metabolites: !!omap - MAM00899m: -1 - MAM01261m: 1 @@ -120750,7 +120774,7 @@ - confidence_score: 0 - !!omap - id: "MAR03272" - - name: "" + - name: "3-cis-Dodecenoyl-CoA delta3-cis-delta2-trans-isomerase" - metabolites: !!omap - MAM00042m: -1 - MAM00099m: 1 @@ -121270,7 +121294,7 @@ - confidence_score: 0 - !!omap - id: "MAR03239" - - name: "" + - name: "3-cis-Dodecenoyl-CoA delta3-cis-delta2-trans-isomerase" - metabolites: !!omap - MAM00042m: -1 - MAM00088m: 1 @@ -121502,7 +121526,7 @@ - confidence_score: 0 - !!omap - id: "MAR03288" - - name: "" + - name: "cis,cis-3,6-Dodecadienoyl-CoA delta3-cis-delta2-trans-isomerase" - metabolites: !!omap - MAM01575m: -1 - MAM03021m: 1 @@ -122257,7 +122281,7 @@ - confidence_score: 0 - !!omap - id: "MAR01573" - - name: "" + - name: "acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)" - metabolites: !!omap - MAM01255m: -1 - MAM01261m: -1 @@ -122277,7 +122301,7 @@ - confidence_score: 0 - !!omap - id: "MAR06901" - - name: "" + - name: "(2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase (adding 7 isopentenyl units)" - metabolites: !!omap - MAM01316c: 1 - MAM01806c: -1 @@ -122295,7 +122319,7 @@ - confidence_score: 0 - !!omap - id: "MAR06903" - - name: "" + - name: "solanesyl-diphosphate:4-hydroxybenzoate nonaprenyltransferase" - metabolites: !!omap - MAM00767m: 1 - MAM00995m: -1 @@ -122469,7 +122493,7 @@ - confidence_score: 0 - !!omap - id: "MAR07166" - - name: "" + - name: "farnesyl-diphosphate:protein-cysteine farnesyltransferase" - metabolites: !!omap - MAM00200c: -1 - MAM01806c: -1 @@ -122487,7 +122511,7 @@ - confidence_score: 0 - !!omap - id: "MAR07167" - - name: "" + - name: "CAAX protease" - metabolites: !!omap - MAM00194c: 1 - MAM02040c: -1 @@ -122505,7 +122529,7 @@ - confidence_score: 0 - !!omap - id: "MAR07168" - - name: "" + - name: "S-Adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase" - metabolites: !!omap - MAM00194c: -1 - MAM00195c: 1 @@ -122541,7 +122565,7 @@ - confidence_score: 0 - !!omap - id: "MAR07170" - - name: "" + - name: "S-(2E,6E)-farnesyl-L-cysteine oxidase" - metabolites: !!omap - MAM00677c: 1 - MAM01628c: 1 @@ -122561,7 +122585,7 @@ - confidence_score: 0 - !!omap - id: "MAR09722" - - name: "" + - name: "NADH:phylloquinone oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02552c: 1 @@ -122580,7 +122604,7 @@ - confidence_score: 0 - !!omap - id: "MAR01644" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA-forming]" - metabolites: !!omap - MAM00036m: 1 - MAM00749m: -1 @@ -122597,7 +122621,7 @@ - confidence_score: 0 - !!omap - id: "MAR01651" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00036m: -1 - MAM00748m: 1 @@ -122616,7 +122640,7 @@ - confidence_score: 0 - !!omap - id: "MAR01920" - - name: "" + - name: "Cholesterol-sulfate sulfohydrolase" - metabolites: !!omap - MAM01450c: 1 - MAM01512c: -1 @@ -122690,7 +122714,7 @@ - confidence_score: 0 - !!omap - id: "MAR01928" - - name: "" + - name: "22beta-Hydroxycholesterol:oxygen oxidoreductase (side-chain-cleaving)" - metabolites: !!omap - MAM00579m: 1 - MAM00606m: -1 @@ -122711,7 +122735,7 @@ - confidence_score: 0 - !!omap - id: "MAR01929" - - name: "" + - name: "20alpha,22beta-Dihydroxycholesterol,ferredoxin:oxygen oxidoreductase (side-chain-cleaving)" - metabolites: !!omap - MAM00579m: -1 - MAM02039m: -1 @@ -122752,7 +122776,7 @@ - confidence_score: 0 - !!omap - id: "MAR01932" - - name: "" + - name: "Cholesterol:oxygen oxidoreductase (side-chain-cleaving)" - metabolites: !!omap - MAM00592c: 1 - MAM01450c: -1 @@ -122773,7 +122797,7 @@ - confidence_score: 0 - !!omap - id: "MAR01933" - - name: "" + - name: "20alpha-hydroxycholesterol,NADPH-hemoprotein reductase:oxygen oxidoreductase (17alpha-hydroxylating)" - metabolites: !!omap - MAM00405c: 1 - MAM00592c: -1 @@ -122794,7 +122818,7 @@ - confidence_score: 0 - !!omap - id: "MAR01934" - - name: "" + - name: "17alpha,20alpha-Dihydroxycholesterol:oxygen oxidoreductase (side-chain-cleaving)" - metabolites: !!omap - MAM00405c: -1 - MAM00408c: 1 @@ -122816,7 +122840,7 @@ - confidence_score: 0 - !!omap - id: "MAR01935" - - name: "" + - name: "20alpha-Hydroxycholesterol:oxygen oxidoreductase (side-chain-cleaving)" - metabolites: !!omap - MAM00579c: 1 - MAM00592c: -1 @@ -122877,7 +122901,7 @@ - confidence_score: 0 - !!omap - id: "MAR01942" - - name: "" + - name: "11-deoxycorticosterone,reduced ferredoxin:oxygen oxidoreductase (11-hydroxylating)" - metabolites: !!omap - MAM00294c: -1 - MAM01614c: 1 @@ -122898,7 +122922,7 @@ - confidence_score: 0 - !!omap - id: "MAR01943" - - name: "" + - name: "pregnenolone,NADPH:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM01184c: 1 - MAM02039c: -1 @@ -122919,7 +122943,7 @@ - confidence_score: 0 - !!omap - id: "MAR01948" - - name: "" + - name: "17alpha-hydroxypregnenolone,NADPH-hemoprotein reductase:oxygen oxidoreductase (21-hydroxylating)" - metabolites: !!omap - MAM00406c: 1 - MAM00408c: -1 @@ -122940,7 +122964,7 @@ - confidence_score: 0 - !!omap - id: "MAR01949" - - name: "" + - name: "11-Deoxycortisol delta5-delat4-isomerase" - metabolites: !!omap - MAM00295c: 1 - MAM00406c: -1 @@ -122959,7 +122983,7 @@ - confidence_score: 0 - !!omap - id: "MAR01950" - - name: "" + - name: "17alpha,21-dihydroxypregnenolone:oxygen oxidoreductase (11-hydroxylating)" - metabolites: !!omap - MAM00283c: 1 - MAM00406c: -1 @@ -122980,7 +123004,7 @@ - confidence_score: 0 - !!omap - id: "MAR01951" - - name: "" + - name: "Cortisol delta5-delat4-isomerase" - metabolites: !!omap - MAM00283c: -1 - MAM01615c: 1 @@ -122999,7 +123023,7 @@ - confidence_score: 0 - !!omap - id: "MAR01989" - - name: "" + - name: "steroid,reduced-adrenal-ferredoxin:oxygen oxidoreductase (11-hydroxylating)" - metabolites: !!omap - MAM00409c: -1 - MAM00603c: 1 @@ -123020,7 +123044,7 @@ - confidence_score: 0 - !!omap - id: "MAR01990" - - name: "" + - name: "21-deoxycortisol,NADPH-hemoprotein reductase:oxygen oxidoreductase (21-hydroxylating)" - metabolites: !!omap - MAM00603c: 1 - MAM01615c: -1 @@ -123041,7 +123065,7 @@ - confidence_score: 0 - !!omap - id: "MAR01991" - - name: "" + - name: "11beta-hydroxyprogesterone,NADPH-hemoprotein reductase:oxygen oxidoreductase (17alpha-hydroxylating)" - metabolites: !!omap - MAM00285c: 1 - MAM00603c: -1 @@ -123062,7 +123086,7 @@ - confidence_score: 0 - !!omap - id: "MAR01992" - - name: "" + - name: "11beta-hydroxyprogesterone,NADPH-hemoprotein reductase:oxygen oxidoreductase (21-hydroxylating)" - metabolites: !!omap - MAM00285c: -1 - MAM01614c: 1 @@ -123083,7 +123107,7 @@ - confidence_score: 0 - !!omap - id: "MAR01993" - - name: "" + - name: "progesterone,reduced ferredoxin:oxygen oxidoreductase (11-hydroxylating)" - metabolites: !!omap - MAM00285c: 1 - MAM02039c: -1 @@ -123104,7 +123128,7 @@ - confidence_score: 0 - !!omap - id: "MAR02002" - - name: "" + - name: "5alpha-pregnane-3,20-dione:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM01072c: -1 - MAM02039c: 1 @@ -123123,7 +123147,7 @@ - confidence_score: 0 - !!omap - id: "MAR02003" - - name: "" + - name: "3alpha-hydroxy-5alpha-pregnan-20-one:NADP+ 3-oxidoreductase (A-specific)" - metabolites: !!omap - MAM00759c: -1 - MAM01072c: 1 @@ -123266,7 +123290,7 @@ - confidence_score: 0 - !!omap - id: "MAR04766" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM01396r: -1 - MAM01397r: 1 @@ -123361,7 +123385,7 @@ - confidence_score: 0 - !!omap - id: "MAR07648" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM01786r: 1 - MAM01787r: -1 @@ -123400,7 +123424,7 @@ - confidence_score: 0 - !!omap - id: "MAR07930" - - name: "" + - name: "Pregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02552c: -1 @@ -123419,7 +123443,7 @@ - confidence_score: 0 - !!omap - id: "MAR07931" - - name: "" + - name: "Pregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM02039r: 1 - MAM02552r: -1 @@ -123567,7 +123591,7 @@ - confidence_score: 0 - !!omap - id: "MAR07939" - - name: "" + - name: "17alpha-Hydroxypregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM00408r: -1 - MAM00409r: 1 @@ -123628,7 +123652,7 @@ - confidence_score: 0 - !!omap - id: "MAR07942" - - name: "" + - name: "Cortisol:NADP+ 11-oxidoreductase" - metabolites: !!omap - MAM01615r: 1 - MAM01616r: -1 @@ -123647,7 +123671,7 @@ - confidence_score: 0 - !!omap - id: "MAR07943" - - name: "" + - name: "Cortisol:NAD+ 11-oxidoreductase" - metabolites: !!omap - MAM01615r: 1 - MAM01616r: -1 @@ -123666,7 +123690,7 @@ - confidence_score: 0 - !!omap - id: "MAR07945" - - name: "" + - name: "Estrone 3-sulfate sulfohydrolase" - metabolites: !!omap - MAM01789r: -1 - MAM01790r: 1 @@ -123685,7 +123709,7 @@ - confidence_score: 0 - !!omap - id: "MAR07948" - - name: "" + - name: "Pregnenolone-sulfate sulfohydrolase" - metabolites: !!omap - MAM02039r: 1 - MAM02040r: -1 @@ -123704,7 +123728,7 @@ - confidence_score: 0 - !!omap - id: "MAR07950" - - name: "" + - name: "Cholesterol-sulfate sulfohydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01512r: -1 @@ -123723,7 +123747,7 @@ - confidence_score: 0 - !!omap - id: "MAR07952" - - name: "" + - name: "3beta-Hydroxyandrost-5-en-17-one 3-sulfate sulfohydrolase" - metabolites: !!omap - MAM01659r: -1 - MAM01660r: 1 @@ -123742,7 +123766,7 @@ - confidence_score: 0 - !!omap - id: "MAR07954" - - name: "" + - name: "3beta-Hydroxyandrost-5-en-17-one:NAD+ 3-oxidoreductase/delta5-delta-4 isomerase" - metabolites: !!omap - MAM00971r: 1 - MAM01660r: -1 @@ -123761,7 +123785,7 @@ - confidence_score: 0 - !!omap - id: "MAR07955" - - name: "" + - name: "testosterone:NAD+ 17-oxidoreductase" - metabolites: !!omap - MAM00971r: -1 - MAM02039r: -1 @@ -123822,7 +123846,7 @@ - confidence_score: 0 - !!omap - id: "MAR07959" - - name: "" + - name: "17beta-hydroxysteroid UDP-glucuronosyltransferase" - metabolites: !!omap - MAM02967r: 1 - MAM02969r: -1 @@ -123840,7 +123864,7 @@ - confidence_score: 0 - !!omap - id: "MAR07962" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM01790r: -1 - MAM01795r: 1 @@ -123858,7 +123882,7 @@ - confidence_score: 0 - !!omap - id: "MAR07965" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM01338r: -1 - MAM01339r: 1 @@ -123876,7 +123900,7 @@ - confidence_score: 0 - !!omap - id: "MAR07968" - - name: "" + - name: "Estradiol-17beta:NAD+ 17-oxidoreductase" - metabolites: !!omap - MAM01787r: 1 - MAM01790r: -1 @@ -123975,7 +123999,7 @@ - confidence_score: 0 - !!omap - id: "MAR07973" - - name: "" + - name: "17alpha-Hydroxypregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM00408c: -1 - MAM00409c: 1 @@ -124013,7 +124037,7 @@ - confidence_score: 0 - !!omap - id: "MAR07976" - - name: "" + - name: "20alpha-Hydroxy-4-pregnen-3-one:NADP+ 20-oxidoreductase" - metabolites: !!omap - MAM00580c: 1 - MAM02039c: -1 @@ -124051,7 +124075,7 @@ - confidence_score: 0 - !!omap - id: "MAR07980" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM01799r: 1 - MAM01800r: -1 @@ -124069,7 +124093,7 @@ - confidence_score: 0 - !!omap - id: "MAR07984" - - name: "" + - name: "UDPglucuronate beta-D-glucuronosyltransferase(acceptor-unspecific)" - metabolites: !!omap - MAM00402r: 1 - MAM01788r: -1 @@ -124147,7 +124171,7 @@ - confidence_score: 0 - !!omap - id: "MAR01952" - - name: "" + - name: "3'-phosphoadenylyl-sulfate:pregnenolone sulfotransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02681c: 1 @@ -124166,7 +124190,7 @@ - confidence_score: 0 - !!omap - id: "MAR01953" - - name: "" + - name: "Pregnenolone-sulfate sulfohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -124287,7 +124311,7 @@ - confidence_score: 0 - !!omap - id: "MAR01967" - - name: "" + - name: "dehydroepiandrosterone:NAD+ oxidoreductase" - metabolites: !!omap - MAM01075c: 1 - MAM01660c: -1 @@ -124306,7 +124330,7 @@ - confidence_score: 0 - !!omap - id: "MAR01968" - - name: "" + - name: "dehydroepiandrosterone:NAD+ oxidoreductase" - metabolites: !!omap - MAM01075r: 1 - MAM01660r: -1 @@ -124325,7 +124349,7 @@ - confidence_score: 0 - !!omap - id: "MAR01969" - - name: "" + - name: "3'-phosphoadenylylsulfate:alcohol sulfotransferase" - metabolites: !!omap - MAM01659c: 1 - MAM01660c: -1 @@ -124382,7 +124406,7 @@ - confidence_score: 0 - !!omap - id: "MAR01973" - - name: "" + - name: "testosterone:NADP+ 17-oxidoreductase" - metabolites: !!omap - MAM00971c: -1 - MAM02039c: -1 @@ -124401,7 +124425,7 @@ - confidence_score: 0 - !!omap - id: "MAR01974" - - name: "" + - name: "testosterone:NADP+ 17-oxidoreductase" - metabolites: !!omap - MAM00971r: -1 - MAM02039r: -1 @@ -124420,7 +124444,7 @@ - confidence_score: 0 - !!omap - id: "MAR01976" - - name: "" + - name: "dihydrotestosterone:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM01069c: 1 - MAM02039c: -1 @@ -124439,7 +124463,7 @@ - confidence_score: 0 - !!omap - id: "MAR01977" - - name: "" + - name: "dihydrotestosterone:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM01069r: 1 - MAM02039r: -1 @@ -124458,7 +124482,7 @@ - confidence_score: 0 - !!omap - id: "MAR01978" - - name: "" + - name: "3beta-Hydroxysteroid:NADP+ oxidoreductase" - metabolites: !!omap - MAM01065c: 1 - MAM01069c: -1 @@ -124477,7 +124501,7 @@ - confidence_score: 0 - !!omap - id: "MAR01982" - - name: "" + - name: "17alpha-Hydroxypregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM00408c: -1 - MAM02039c: 1 @@ -124512,7 +124536,7 @@ - confidence_score: 0 - !!omap - id: "MAR02014" - - name: "" + - name: "5alpha-androstane-3,17-dione:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM00971c: -1 - MAM01064c: 1 @@ -124531,7 +124555,7 @@ - confidence_score: 0 - !!omap - id: "MAR02015" - - name: "" + - name: "5alpha-androstane-3,17-dione:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM00971r: -1 - MAM01064r: 1 @@ -124550,7 +124574,7 @@ - confidence_score: 0 - !!omap - id: "MAR02016" - - name: "" + - name: "Androsterone:NAD+ oxidoreductase" - metabolites: !!omap - MAM01064c: -1 - MAM01338c: 1 @@ -124569,7 +124593,7 @@ - confidence_score: 0 - !!omap - id: "MAR02017" - - name: "" + - name: "Androsterone:NAD+ oxidoreductase" - metabolites: !!omap - MAM01064r: -1 - MAM01338r: 1 @@ -124588,7 +124612,7 @@ - confidence_score: 0 - !!omap - id: "MAR02018" - - name: "" + - name: "Androsterone:NADP+ oxidoreductase" - metabolites: !!omap - MAM01064c: -1 - MAM01338c: 1 @@ -124607,7 +124631,7 @@ - confidence_score: 0 - !!omap - id: "MAR02019" - - name: "" + - name: "Androsterone:NADP+ oxidoreductase" - metabolites: !!omap - MAM01064r: -1 - MAM01338r: 1 @@ -124702,7 +124726,7 @@ - confidence_score: 0 - !!omap - id: "MAR01440" - - name: "" + - name: "(R)-Mevalonate:NADP+ oxidoreductase (CoA acylating)" - metabolites: !!omap - MAM00167c: 1 - MAM01597c: 1 @@ -124722,7 +124746,7 @@ - confidence_score: 0 - !!omap - id: "MAR01445" - - name: "" + - name: "ATP:(R)-mevalonate 5-phosphotransferase" - metabolites: !!omap - MAM00165c: 1 - MAM00167c: -1 @@ -124741,7 +124765,7 @@ - confidence_score: 0 - !!omap - id: "MAR01448" - - name: "" + - name: "ATP:(R)-5-phosphomevalonate phosphotransferase" - metabolites: !!omap - MAM00164c: -1 - MAM00165c: 1 @@ -124759,7 +124783,7 @@ - confidence_score: 0 - !!omap - id: "MAR01454" - - name: "" + - name: "isopentenyl-diphosphate Delta3-Delta2-isomerase" - metabolites: !!omap - MAM01706c: 1 - MAM02187c: -1 @@ -124775,7 +124799,7 @@ - confidence_score: 0 - !!omap - id: "MAR01465" - - name: "" + - name: "farnesyl-diphosphate:farnesyl-diphosphate farnesyltransferase" - metabolites: !!omap - MAM01806c: 2 - MAM02759c: -1 @@ -124792,7 +124816,7 @@ - confidence_score: 0 - !!omap - id: "MAR01467" - - name: "" + - name: "presqualene-diphosphate diphosphate-lyase (reducing, squalene-forming)" - metabolites: !!omap - MAM02039c: -1 - MAM02554c: 1 @@ -124812,7 +124836,7 @@ - confidence_score: 0 - !!omap - id: "MAR01470" - - name: "" + - name: "squalene,NADPH-hemoprotein:oxygen oxidoreductase (2,3-epoxidizing)" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 1 @@ -124833,7 +124857,7 @@ - confidence_score: 0 - !!omap - id: "MAR01473" - - name: "" + - name: "(S)-2,3-Epoxysqualene mutase (cyclizing, lanosterol-forming)" - metabolites: !!omap - MAM02336c: 1 - MAM02932c: -1 @@ -124891,7 +124915,7 @@ - confidence_score: 0 - !!omap - id: "MAR01479" - - name: "" + - name: "lanosterol,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (14-methyl cleaving)" - metabolites: !!omap - MAM00937c: -1 - MAM00941c: 1 @@ -124912,7 +124936,7 @@ - confidence_score: 0 - !!omap - id: "MAR01484" - - name: "" + - name: "4,4-dimethyl-5a-cholesta-8,24-dien-3b-ol:NADP+ D14-oxidoreductase" - metabolites: !!omap - MAM00367c: 1 - MAM00941c: -1 @@ -124931,7 +124955,7 @@ - confidence_score: 0 - !!omap - id: "MAR01490" - - name: "" + - name: "14-demethyllanosterol,ferrocytochrome-b5:oxygen oxidoreductase (hydroxylating)" - metabolites: !!omap - MAM00367c: -1 - MAM00961c: 1 @@ -125034,7 +125058,7 @@ - confidence_score: 0 - !!omap - id: "MAR01500" - - name: "" + - name: "4alpha-methylzymosterol:NADP+ 3-oxidoreductase" - metabolites: !!omap - MAM00809c: -1 - MAM00968c: 1 @@ -125155,7 +125179,7 @@ - confidence_score: 0 - !!omap - id: "MAR01512" - - name: "" + - name: "delta8,24-Cholestadien-3beta-ol delta7-delta8-isomerase" - metabolites: !!omap - MAM01066c: 1 - MAM03158c: -1 @@ -125211,7 +125235,7 @@ - confidence_score: 0 - !!omap - id: "MAR01526" - - name: "" + - name: "cholesterol:NADP+ Delta24-oxidoreductase" - metabolites: !!omap - MAM01450c: 1 - MAM01675c: -1 @@ -125230,7 +125254,7 @@ - confidence_score: 0 - !!omap - id: "MAR01533" - - name: "" + - name: "lanosterol D24-reductase" - metabolites: !!omap - MAM01066c: -1 - MAM02039c: -1 @@ -125249,7 +125273,7 @@ - confidence_score: 0 - !!omap - id: "MAR01557" - - name: "" + - name: "lathosterol,ferrocytochrome b5:oxygen oxidoreductase 5,6-dehydrogenating" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 2 @@ -125270,7 +125294,7 @@ - confidence_score: 0 - !!omap - id: "MAR01558" - - name: "" + - name: "lathosterol,ferrocytochrome b5:oxygen oxidoreductase 5,6-dehydrogenating" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 2 @@ -125291,7 +125315,7 @@ - confidence_score: 0 - !!omap - id: "MAR01565" - - name: "" + - name: "cholesterol:NADP+ delta7-oxidoreductase" - metabolites: !!omap - MAM01450c: 1 - MAM02039c: -1 @@ -125310,7 +125334,7 @@ - confidence_score: 0 - !!omap - id: "MAR01535" - - name: "" + - name: "lanosterol delta24-reductase" - metabolites: !!omap - MAM00609c: 1 - MAM02039c: -1 @@ -125615,7 +125639,7 @@ - confidence_score: 0 - !!omap - id: "MAR01553" - - name: "" + - name: "5alpha-Cholest-7-en-3beta-ol delta7-delta8-isomerase" - metabolites: !!omap - MAM01449c: -1 - MAM02343c: 1 @@ -125631,7 +125655,7 @@ - confidence_score: 0 - !!omap - id: "MAR01437" - - name: "" + - name: "acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)" - metabolites: !!omap - MAM01255c: -1 - MAM01261c: -1 @@ -125651,7 +125675,7 @@ - confidence_score: 0 - !!omap - id: "MAR01451" - - name: "" + - name: "ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP" - metabolites: !!omap - MAM00164c: -1 - MAM01285c: 1 @@ -125671,7 +125695,7 @@ - confidence_score: 0 - !!omap - id: "MAR01457" - - name: "" + - name: "Dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase" - metabolites: !!omap - MAM01706c: -1 - MAM01953c: 1 @@ -125689,7 +125713,7 @@ - confidence_score: 0 - !!omap - id: "MAR01460" - - name: "" + - name: "Geranyl-diphosphate:isopentenyl-diphosphate geranyltrans-transferase" - metabolites: !!omap - MAM01806c: 1 - MAM01953c: -1 @@ -125747,7 +125771,7 @@ - confidence_score: 0 - !!omap - id: "MAR01576" - - name: "" + - name: "Acetoacetate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01253m: -1 - MAM01255m: 1 @@ -125767,7 +125791,7 @@ - confidence_score: 0 - !!omap - id: "MAR01577" - - name: "" + - name: "(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)" - metabolites: !!omap - MAM01253m: 1 - MAM01261m: 1 @@ -125784,7 +125808,7 @@ - confidence_score: 0 - !!omap - id: "MAR03105" - - name: "" + - name: "acetyl-CoA:acetyl-CoA C-acetyltransferase" - metabolites: !!omap - MAM01255x: -1 - MAM01261x: 2 @@ -125801,7 +125825,7 @@ - confidence_score: 0 - !!omap - id: "MAR04630" - - name: "" + - name: "(R)-Mevalonate:NADP+ oxidoreductase (CoA acylating)" - metabolites: !!omap - MAM00167x: 1 - MAM01597x: 1 @@ -125880,7 +125904,7 @@ - confidence_score: 0 - !!omap - id: "MAR02032" - - name: "" + - name: "19-hydroxyandrostenedione,NADPH---hemoprotein reductase:oxygen 19-oxidoreductase" - metabolites: !!omap - MAM00431c: 1 - MAM00971c: -1 @@ -125918,7 +125942,7 @@ - confidence_score: 0 - !!omap - id: "MAR02034" - - name: "" + - name: "19-oxoandrostenedione,NADPH---hemoprotein reductase:oxygen oxidoreductase (aromatizing, formate-forming)" - metabolites: !!omap - MAM00433c: -1 - MAM01790c: 1 @@ -125939,7 +125963,7 @@ - confidence_score: 0 - !!omap - id: "MAR02036" - - name: "" + - name: "Estradiol-17beta:NADP+ 17-oxidoreductase" - metabolites: !!omap - MAM01787c: 1 - MAM01790c: -1 @@ -125958,7 +125982,7 @@ - confidence_score: 0 - !!omap - id: "MAR02037" - - name: "" + - name: "3'-Phosphoadenylylsulfate:estrone 3-sulfotransferase" - metabolites: !!omap - MAM01789c: 1 - MAM01790c: -1 @@ -125977,7 +126001,7 @@ - confidence_score: 2 - !!omap - id: "MAR02038" - - name: "" + - name: "Estrone 3-sulfate sulfohydrolase" - metabolites: !!omap - MAM01789c: -1 - MAM01790c: 1 @@ -126324,7 +126348,7 @@ - confidence_score: 0 - !!omap - id: "MAR02058" - - name: "" + - name: "S-adenosyl-L-methionine:2-Hydroxyestrone O-methyltransferase" - metabolites: !!omap - MAM00650c: -1 - MAM00660c: 1 @@ -126343,7 +126367,7 @@ - confidence_score: 0 - !!omap - id: "MAR02059" - - name: "" + - name: "S-adenosyl-L-methionine:2-Hydroxyestrone O-methyltransferase" - metabolites: !!omap - MAM00650r: -1 - MAM00660r: 1 @@ -127126,7 +127150,7 @@ - confidence_score: 0 - !!omap - id: "MAR03538" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450l: 1 - MAM01498l: -1 @@ -127145,7 +127169,7 @@ - confidence_score: 0 - !!omap - id: "MAR03539" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450l: 1 - MAM01510l: -1 @@ -127164,7 +127188,7 @@ - confidence_score: 0 - !!omap - id: "MAR03540" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450l: 1 - MAM01501l: -1 @@ -127183,7 +127207,7 @@ - confidence_score: 0 - !!omap - id: "MAR03541" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00128l: 1 - MAM01450l: 1 @@ -127202,7 +127226,7 @@ - confidence_score: 0 - !!omap - id: "MAR03542" - - name: "" + - name: 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0 - !!omap - id: "MAR03678" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00131r: -1 - MAM01450r: -1 @@ -129293,7 +129317,7 @@ - confidence_score: 0 - !!omap - id: "MAR03679" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00110r: -1 - MAM01450r: -1 @@ -129311,7 +129335,7 @@ - confidence_score: 0 - !!omap - id: "MAR03680" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00093r: -1 - MAM01450r: -1 @@ -129329,7 +129353,7 @@ - confidence_score: 0 - !!omap - id: "MAR03681" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00009r: -1 - MAM01450r: -1 @@ -129347,7 +129371,7 @@ - confidence_score: 0 - !!omap - id: "MAR03682" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00023r: -1 - MAM01450r: -1 @@ -129365,7 +129389,7 @@ - confidence_score: 0 - !!omap - id: "MAR03683" - - name: "" + - name: "Acyl-CoA:cholesterol O-acyltransferase" - metabolites: !!omap - MAM00264r: -1 - MAM01450r: -1 @@ -129383,7 +129407,7 @@ - confidence_score: 0 - !!omap - id: "MAR03684" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01498r: -1 @@ -129402,7 +129426,7 @@ - confidence_score: 0 - !!omap - id: "MAR03685" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01510r: -1 @@ -129421,7 +129445,7 @@ - confidence_score: 0 - !!omap - id: "MAR03686" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01501r: -1 @@ -129440,7 +129464,7 @@ - confidence_score: 0 - !!omap - id: "MAR03687" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00128r: 1 - MAM01450r: 1 @@ -129459,7 +129483,7 @@ - confidence_score: 0 - !!omap - id: "MAR03688" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00117r: 1 - MAM01450r: 1 @@ -129478,7 +129502,7 @@ - confidence_score: 0 - !!omap - id: "MAR03689" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01470r: -1 @@ -129497,7 +129521,7 @@ - confidence_score: 0 - !!omap - id: "MAR03690" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01506r: -1 @@ -129516,7 +129540,7 @@ - confidence_score: 0 - !!omap - id: "MAR03691" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01504r: -1 @@ -129535,7 +129559,7 @@ - confidence_score: 0 - !!omap - id: "MAR03692" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01197r: 1 - MAM01450r: 1 @@ -129554,7 +129578,7 @@ - confidence_score: 0 - !!omap - id: "MAR03693" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01505r: -1 @@ -129573,7 +129597,7 @@ - confidence_score: 0 - !!omap - id: "MAR03694" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01495r: -1 @@ -129592,7 +129616,7 @@ - confidence_score: 0 - !!omap - id: "MAR03695" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00003r: 1 - MAM01450r: 1 @@ -129611,7 +129635,7 @@ - confidence_score: 0 - !!omap - id: "MAR03696" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01238r: 1 - MAM01450r: 1 @@ -129630,7 +129654,7 @@ - confidence_score: 0 - !!omap - id: "MAR03697" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01507r: -1 @@ -129649,7 +129673,7 @@ - confidence_score: 0 - !!omap - id: "MAR03698" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00019r: 1 - MAM01450r: 1 @@ -129668,7 +129692,7 @@ - confidence_score: 0 - !!omap - id: "MAR03699" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01489r: -1 @@ -129687,7 +129711,7 @@ - confidence_score: 0 - !!omap - id: "MAR03700" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01503r: -1 @@ -129706,7 +129730,7 @@ - confidence_score: 0 - !!omap - id: "MAR03701" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01486r: -1 @@ -129725,7 +129749,7 @@ - confidence_score: 0 - !!omap - id: "MAR03702" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00115r: 1 - MAM01450r: 1 @@ -129744,7 +129768,7 @@ - confidence_score: 0 - !!omap - id: "MAR03703" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00104r: 1 - MAM01450r: 1 @@ -129763,7 +129787,7 @@ - confidence_score: 0 - !!omap - id: "MAR03704" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01502r: -1 @@ -129782,7 +129806,7 @@ - confidence_score: 0 - !!omap - id: "MAR03705" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01492r: -1 @@ -129801,7 +129825,7 @@ - confidence_score: 0 - !!omap - id: "MAR03706" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00017r: 1 - MAM01450r: 1 @@ -129820,7 +129844,7 @@ - confidence_score: 0 - !!omap - id: "MAR03707" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01458r: -1 @@ -129839,7 +129863,7 @@ - confidence_score: 0 - !!omap - id: "MAR03708" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01235r: 1 - MAM01450r: 1 @@ -129858,7 +129882,7 @@ - confidence_score: 0 - !!omap - id: "MAR03709" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01207r: 1 - MAM01450r: 1 @@ -129877,7 +129901,7 @@ - confidence_score: 0 - !!omap - id: "MAR03710" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01469r: -1 @@ -129896,7 +129920,7 @@ - confidence_score: 0 - !!omap - id: "MAR03711" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01494r: -1 @@ -129915,7 +129939,7 @@ - confidence_score: 0 - !!omap - id: "MAR03712" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01373r: 1 - MAM01450r: 1 @@ -129934,7 +129958,7 @@ - confidence_score: 0 - !!omap - id: "MAR03713" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01462r: -1 @@ -129953,7 +129977,7 @@ - confidence_score: 0 - !!omap - id: "MAR03714" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01457r: -1 @@ -129972,7 +129996,7 @@ - confidence_score: 0 - !!omap - id: "MAR03715" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01509r: -1 @@ -129991,7 +130015,7 @@ - confidence_score: 0 - !!omap - id: "MAR03716" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01508r: -1 @@ -130010,7 +130034,7 @@ - confidence_score: 0 - !!omap - id: "MAR03717" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01465r: -1 @@ -130029,7 +130053,7 @@ - confidence_score: 0 - !!omap - id: "MAR03718" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01432r: 1 - MAM01450r: 1 @@ -130048,7 +130072,7 @@ - confidence_score: 0 - !!omap - id: "MAR03719" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01497r: -1 @@ -130067,7 +130091,7 @@ - confidence_score: 0 - !!omap - id: "MAR03720" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01500r: -1 @@ -130086,7 +130110,7 @@ - confidence_score: 0 - !!omap - id: "MAR03721" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01473r: -1 @@ -130105,7 +130129,7 @@ - confidence_score: 0 - !!omap - id: "MAR03722" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01480r: -1 @@ -130124,7 +130148,7 @@ - confidence_score: 0 - !!omap - id: "MAR03723" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01468r: -1 @@ -130143,7 +130167,7 @@ - confidence_score: 0 - !!omap - id: "MAR03724" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01475r: -1 @@ -130162,7 +130186,7 @@ - confidence_score: 0 - !!omap - id: "MAR03725" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00135r: 1 - MAM01450r: 1 @@ -130181,7 +130205,7 @@ - confidence_score: 0 - !!omap - id: "MAR03726" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00114r: 1 - MAM01450r: 1 @@ -130200,7 +130224,7 @@ - confidence_score: 0 - !!omap - id: "MAR03727" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01466r: -1 @@ -130219,7 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acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01493r: -1 @@ -130333,7 +130357,7 @@ - confidence_score: 0 - !!omap - id: "MAR03734" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01450r: 1 - MAM01490r: -1 @@ -130352,7 +130376,7 @@ - confidence_score: 0 - !!omap - id: "MAR03735" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01362r: 1 - MAM01450r: 1 @@ -130371,7 +130395,7 @@ - confidence_score: 0 - !!omap - id: "MAR03736" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM01291r: 1 - MAM01450r: 1 @@ -130390,7 +130414,7 @@ - confidence_score: 0 - !!omap - id: "MAR03737" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00132r: 1 - MAM01450r: 1 @@ -130409,7 +130433,7 @@ - confidence_score: 0 - !!omap - id: "MAR03738" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00111r: 1 - MAM01450r: 1 @@ -130428,7 +130452,7 @@ - confidence_score: 0 - !!omap - id: "MAR03739" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00094r: 1 - MAM01450r: 1 @@ -130447,7 +130471,7 @@ - confidence_score: 0 - !!omap - id: "MAR03740" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00008r: 1 - MAM01450r: 1 @@ -130466,7 +130490,7 @@ - confidence_score: 0 - !!omap - id: "MAR03741" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00021r: 1 - MAM01450r: 1 @@ -130485,7 +130509,7 @@ - confidence_score: 0 - !!omap - id: "MAR03742" - - name: "" + - name: "Steryl-ester acylhydrolase" - metabolites: !!omap - MAM00265r: 1 - MAM01450r: 1 @@ -130504,7 +130528,7 @@ - confidence_score: 0 - !!omap - id: "MAR00715" - - name: "" + - name: "dihydroceramide,ferrocytochrome b5:oxygen oxidoreductase (C4-hydroxylating)" - metabolites: !!omap - MAM01699c: -1 - MAM02039c: -1 @@ -130525,7 +130549,7 @@ - confidence_score: 0 - !!omap - id: "MAR00716" - - name: "" + - name: "Phytoceramide amidohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02748c: -1 @@ -130543,7 +130567,7 @@ - confidence_score: 0 - !!omap - id: "MAR00733" - - name: "" + - name: "acyl-CoA:sphingosine N-acyltransferase" - metabolites: !!omap - MAM01430g: -1 - MAM01597g: -1 @@ -130562,7 +130586,7 @@ - confidence_score: 0 - !!omap - id: "MAR00735" - - name: "" + - name: "ceramide:phosphatidylcholine cholinephosphotransferase" - metabolites: !!omap - MAM00235g: 1 - MAM01430g: -1 @@ -130580,7 +130604,7 @@ - confidence_score: 0 - !!omap - id: "MAR00736" - - name: "" + - name: "ceramide:phosphatidylcholine cholinephosphotransferase" - metabolites: !!omap - MAM00235c: 1 - MAM01430c: -1 @@ -130598,7 +130622,7 @@ - confidence_score: 0 - !!omap - id: "MAR00738" - - name: "" + - name: "Palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating)" - metabolites: !!omap - MAM00769c: 1 - MAM01596c: 1 @@ -130618,7 +130642,7 @@ - confidence_score: 0 - !!omap - id: "MAR00741" - - name: "" + - name: "Sphinganine:NADP+ 3-oxidoreductase" - metabolites: !!omap - MAM00769c: -1 - MAM02039c: -1 @@ -130637,7 +130661,7 @@ - confidence_score: 0 - !!omap - id: "MAR00744" - - name: "" + - name: "ATP:sphinganine 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -130656,7 +130680,7 @@ - confidence_score: 0 - !!omap - id: "MAR00746" - - name: "" + - name: "3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -130674,7 +130698,7 @@ - confidence_score: 0 - !!omap - id: "MAR00748" - - name: "" + - name: "Sphinganine-1-phosphate pamlmitaldehyde-lyase" - metabolites: !!omap - MAM01798c: -1 - MAM02113c: -1 @@ -130710,7 +130734,7 @@ - confidence_score: 0 - !!omap - id: "MAR00753" - - name: "" + - name: "N-acylsphingosine amidohydrolase" - metabolites: !!omap - MAM01699c: -1 - MAM02040c: -1 @@ -130749,7 +130773,7 @@ - confidence_score: 0 - !!omap - id: "MAR00758" - - name: "" + - name: "acyl-CoA:sphingosine 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"3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM01430c: 1 - MAM01431c: -1 @@ -130898,7 +130922,7 @@ - confidence_score: 0 - !!omap - id: "MAR00773" - - name: "" + - name: "ATP:sphingosine 1-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -130917,7 +130941,7 @@ - confidence_score: 0 - !!omap - id: "MAR00775" - - name: "" + - name: "3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -130935,7 +130959,7 @@ - confidence_score: 0 - !!omap - id: "MAR00779" - - name: "" + - name: "sphingosine-1-phosphate palmitaldehyde-lyase (phosphoethanolamine-forming)" - metabolites: !!omap - MAM01798c: 1 - MAM02116c: 1 @@ -130952,7 +130976,7 @@ - confidence_score: 0 - !!omap - id: "MAR00781" - - name: "" + - name: "hexadecanal:NADP+ delta2-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02113c: 1 @@ -130971,7 +130995,7 @@ - confidence_score: 0 - !!omap - id: "MAR00783" - - name: "" + - name: "3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM02040e: -1 - MAM02751e: 1 @@ -130989,7 +131013,7 @@ - confidence_score: 0 - !!omap - id: "MAR00795" - - name: "" + - name: "Sphingomyelin cholinephosphohydrolase" - metabolites: !!omap - MAM01430c: 1 - MAM02039c: 1 @@ -131008,7 +131032,7 @@ - confidence_score: 0 - !!omap - id: "MAR08147" - - name: "" + - name: "UDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase" - metabolites: !!omap - MAM01972g: -1 - MAM02039g: 1 @@ -131805,7 +131829,7 @@ - confidence_score: 0 - !!omap - id: "MAR00786" - - name: "" + - name: "beta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase" - metabolites: !!omap - MAM01910l: 1 - MAM01972l: 1 @@ -131861,7 +131885,7 @@ - confidence_score: 0 - !!omap - id: "MAR08210" - - name: "" + - name: "D-galactosyl-N-acylsphingosine galactohydrolase" - metabolites: !!omap - MAM01430l: 1 - MAM01679l: -1 @@ -131879,7 +131903,7 @@ - confidence_score: 0 - !!omap - id: "MAR08211" - - name: "" + - name: "N-Acylsphingosine amidohydrolase" - metabolites: !!omap - MAM01430l: -1 - MAM02040l: -1 @@ -131897,7 +131921,7 @@ - confidence_score: 0 - !!omap - id: "MAR08212" - - name: "" + - name: "3'-Phosphoadenylylsulfate:digalactosylceramide 3'-sulfotransferase" - metabolites: !!omap - MAM01694g: -1 - MAM01695g: 1 @@ -131916,7 +131940,7 @@ - confidence_score: 0 - !!omap - id: "MAR08217" - - name: "" + - name: "Digalactosylceramide galactohydrolase" - metabolites: !!omap - MAM01679l: 1 - MAM01694l: -1 @@ -132062,7 +132086,7 @@ - confidence_score: 0 - !!omap - id: "MAR08233" - - name: "" + - name: "3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM02040r: -1 - MAM02751r: 1 @@ -132080,7 +132104,7 @@ - confidence_score: 0 - !!omap - id: "MAR08235" - - name: "" + - name: "3-sn-phosphatidate phosphohydrolase" - metabolites: !!omap - MAM02040r: -1 - MAM02751r: 1 @@ -132098,7 +132122,7 @@ - confidence_score: 0 - !!omap - id: "MAR08237" - - name: "" + - name: "Sphinganine-1-phosphate pamlmitaldehyde-lyase" - metabolites: !!omap - MAM01798r: 1 - MAM02113r: 1 @@ -132134,7 +132158,7 @@ - confidence_score: 0 - !!omap - id: "MAR08242" - - name: "" + - name: "Sphingomyelin cholinephosphohydrolase" - metabolites: !!omap - MAM01430g: 1 - MAM02039g: 1 @@ -132190,7 +132214,7 @@ - confidence_score: 0 - !!omap - id: "MAR08248" - - name: "" + - name: "UDP-glucose:N-acylsphingosine D-glucosyltransferase" - metabolites: !!omap - MAM01430r: -1 - MAM01972r: 1 @@ -132266,7 +132290,7 @@ - confidence_score: 0 - !!omap - id: "MAR00453" - - name: "" + - name: "glycerol:NADP+ oxidoreductase" - metabolites: !!omap - MAM01981c: -1 - MAM01983c: 1 @@ -132285,7 +132309,7 @@ - confidence_score: 0 - !!omap - id: "MAR00456" - - name: "" + - name: "D-Glyceraldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01981c: -1 - MAM01982c: 1 @@ -132305,7 +132329,7 @@ - confidence_score: 0 - !!omap - id: "MAR00458" - - name: "" + - name: "glycerol:NADP+ oxidoreductase" - metabolites: !!omap - MAM01981m: 1 - MAM01983m: -1 @@ -132324,7 +132348,7 @@ - confidence_score: 0 - !!omap - id: "MAR00459" - - name: "" + - name: "D-Glyceraldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01981m: -1 - MAM01982m: 1 @@ -132344,7 +132368,7 @@ - confidence_score: 0 - !!omap - id: "MAR00463" - - name: "" + - name: "phosphatidylcholine 2-acylhydrolase" - metabolites: !!omap - MAM00656r: 1 - MAM02039r: 1 @@ -133425,7 +133449,7 @@ - confidence_score: 0 - !!omap - id: "MAR00588" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02733c: 1 @@ -133443,7 +133467,7 @@ - confidence_score: 0 - !!omap - id: "MAR00596" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00240c: 1 - MAM02040c: -1 @@ -133461,7 +133485,7 @@ - confidence_score: 0 - !!omap - id: "MAR00673" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00509c: -1 - MAM01285c: 1 @@ -133480,7 +133504,7 @@ - confidence_score: 0 - !!omap - id: "MAR00674" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00504c: -1 - MAM01285c: 1 @@ -133499,7 +133523,7 @@ - confidence_score: 0 - !!omap - id: "MAR00675" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00505c: -1 - MAM01285c: 1 @@ -133518,7 +133542,7 @@ - confidence_score: 0 - !!omap - id: "MAR00676" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00507c: -1 - MAM01285c: 1 @@ -133537,7 +133561,7 @@ - confidence_score: 0 - !!omap - id: "MAR00677" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00506c: -1 - MAM01285c: 1 @@ -133556,7 +133580,7 @@ - confidence_score: 0 - !!omap - id: "MAR00678" - - name: "" + - name: "ATP:acylglycerol 3-phosphotransferase" - metabolites: !!omap - MAM00508c: -1 - MAM01285c: 1 @@ -133575,7 +133599,7 @@ - confidence_score: 0 - !!omap - id: "MAR04296" - - name: "" + - name: "ethanolamine-phosphate phosphate-lyase (deaminating" - metabolites: !!omap - MAM01249c: 1 - MAM01798c: -1 @@ -133595,7 +133619,7 @@ - confidence_score: 0 - !!omap - id: "MAR04390" - - name: "" + - name: "Glycerone phosphate phosphohydrolase" - metabolites: !!omap - MAM01690e: -1 - MAM01984e: 1 @@ -133613,7 +133637,7 @@ - confidence_score: 0 - !!omap - id: "MAR05254" - - name: "" + - name: "phosphatidylcholine 2-acylhydrolase" - metabolites: !!omap - MAM00656l: 1 - MAM02039l: 1 @@ -133632,7 +133656,7 @@ - confidence_score: 0 - !!omap - id: "MAR07599" - - name: "" + - name: "CDPethanolamine:1-alkyl-2-acylglycerol ethanolaminephosphotransferase" - metabolites: !!omap - MAM00514c: -1 - MAM00515c: 1 @@ -133651,7 +133675,7 @@ - confidence_score: 0 - !!omap - id: "MAR00448" - - name: "" + - name: "ATP:glycerol 3-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -133670,7 +133694,7 @@ - confidence_score: 0 - !!omap - id: "MAR00450" - - name: "" + - name: "ATP:glycerol 3-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -133708,7 +133732,7 @@ - confidence_score: 0 - !!omap - id: "MAR00478" - - name: "" + - name: "sn-Glycerol-3-phosphate:NADP+ 2-oxidoreductase" - metabolites: !!omap - MAM01690c: -1 - MAM02039c: -1 @@ -133727,7 +133751,7 @@ - confidence_score: 0 - !!omap - id: "MAR00479" - - name: "" + - name: "sn-Glycerol-3-phosphate:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01690c: -1 - MAM02039c: -1 @@ -133746,7 +133770,7 @@ - confidence_score: 0 - !!omap - id: "MAR00481" - - name: "" + - name: "sn-Glycerol-3-phosphate:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM01690x: -1 - MAM02039x: -1 @@ -133765,7 +133789,7 @@ - confidence_score: 0 - !!omap - id: "MAR00483" - - name: "" + - name: "sn-glycerol 3-phosphate:quinone oxidoreductase" - metabolites: !!omap - MAM01690c: 1 - MAM02914c: -1 @@ -133783,7 +133807,7 @@ - confidence_score: 0 - !!omap - id: "MAR00482" - - name: "" + - name: "sn-Glycerol-3-phosphate:(acceptor) 2-oxidoreductase" - metabolites: !!omap - MAM01690c: 1 - MAM01802c: -1 @@ -133801,7 +133825,7 @@ - confidence_score: 0 - !!omap - id: "MAR00484" - - name: "" + - name: "CDPglycerol phosphoglycerohydrolase" - metabolites: !!omap - MAM01429c: -1 - MAM01590c: 1 @@ -133820,7 +133844,7 @@ - confidence_score: 0 - !!omap - id: "MAR00579" - - name: "" + - name: "acyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase" - metabolites: !!omap - MAM01597m: 1 - MAM02914m: -1 @@ -133838,7 +133862,7 @@ - confidence_score: 0 - !!omap - id: "MAR00580" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597m: 1 - MAM02727m: 1 @@ -133912,7 +133936,7 @@ - confidence_score: 0 - !!omap - id: "MAR00586" - - name: "" + - name: "CDP-diacylglycerol:phosphatidylglycerol 3-phosphatidyltransferase" - metabolites: !!omap - MAM01426m: -1 - MAM01589m: 1 @@ -133931,7 +133955,7 @@ - confidence_score: 0 - !!omap - id: "MAR00589" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02728c: 1 @@ -133949,7 +133973,7 @@ - confidence_score: 0 - !!omap - id: "MAR00590" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02729c: 1 @@ -133967,7 +133991,7 @@ - confidence_score: 0 - !!omap - id: "MAR00591" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02731c: 1 @@ -133985,7 +134009,7 @@ - confidence_score: 0 - !!omap - id: "MAR00592" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02730c: 1 @@ -134003,7 +134027,7 @@ - confidence_score: 0 - !!omap - id: "MAR00593" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM01597c: 1 - MAM02732c: 1 @@ -134021,7 +134045,7 @@ - confidence_score: 0 - !!omap - id: "MAR00594" - - name: "" + - name: "acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase" - metabolites: !!omap - MAM00473c: -1 - MAM01269c: -1 @@ -134039,7 +134063,7 @@ - confidence_score: 0 - !!omap - id: "MAR00597" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00235c: 1 - MAM02040c: -1 @@ -134057,7 +134081,7 @@ - confidence_score: 0 - !!omap - id: "MAR00598" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00236c: 1 - MAM02040c: -1 @@ -134075,7 +134099,7 @@ - confidence_score: 0 - !!omap - id: "MAR00599" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00238c: 1 - MAM02040c: -1 @@ -134093,7 +134117,7 @@ - confidence_score: 0 - !!omap - id: "MAR00600" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00237c: 1 - MAM02040c: -1 @@ -134111,7 +134135,7 @@ - confidence_score: 0 - !!omap - id: "MAR00601" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00239c: 1 - MAM02040c: -1 @@ -134129,7 +134153,7 @@ - confidence_score: 0 - !!omap - id: "MAR00602" - - name: "" + - name: "1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00233c: 1 - MAM02040c: -1 @@ -134147,7 +134171,7 @@ - confidence_score: 0 - !!omap - id: "MAR00607" - - name: "" + - name: "CTP:phosphatidate cytidyltransferase" - metabolites: !!omap - MAM01427c: -1 - MAM01623c: 1 @@ -134166,7 +134190,7 @@ - confidence_score: 0 - !!omap - id: "MAR00610" - - name: "" + - name: "CDP-diacylglycerol:myo-inositol 3-phosphatidyltransferase" - metabolites: !!omap - MAM01427c: -1 - MAM01590c: 1 @@ -134185,7 +134209,7 @@ - confidence_score: 0 - !!omap - id: "MAR00613" - - name: "" + - name: "CDP-diacylglycerol:myo-inositol 3-phosphatidyltransferase" - metabolites: !!omap - MAM01427r: -1 - MAM01590r: 1 @@ -134204,7 +134228,7 @@ - confidence_score: 0 - !!omap - id: "MAR00614" - - name: "" + - name: "CDPethanolamine:1,2-diacylglycerol ethanolaminephosphotransferase" - metabolites: !!omap - MAM00236c: -1 - MAM01428c: -1 @@ -134223,7 +134247,7 @@ - confidence_score: 0 - !!omap - id: "MAR00615" - - name: "" + - name: "CDPethanolamine:1,2-diacylglycerol ethanolaminephosphotransferase" - metabolites: !!omap - MAM00238c: -1 - MAM01428c: -1 @@ -134242,7 +134266,7 @@ - confidence_score: 0 - !!omap - id: "MAR00616" - - name: "" + - name: "Phsophatidyl-L-serine carboxy-lyase" - metabolites: !!omap - MAM01596c: -1 - MAM02039c: 1 @@ -134260,7 +134284,7 @@ - confidence_score: 0 - !!omap - id: "MAR00622" - - name: "" + - name: "L-1-phosphatidylethanolamine:L-serine phosphatidyltransferase" - metabolites: !!omap - MAM01797c: 1 - MAM02685c: -1 @@ -134315,7 +134339,7 @@ - confidence_score: 0 - !!omap - id: "MAR00627" - - name: "" + - name: "Phsophatidyl-L-serine carboxy-lyase" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -134333,7 +134357,7 @@ - confidence_score: 0 - !!omap - id: "MAR00629" - - name: "" + - name: "phosphatidylcholine phosphatidohydrolase" - metabolites: !!omap - MAM01513c: 1 - MAM02039c: 1 @@ -134352,7 +134376,7 @@ - confidence_score: 0 - !!omap - id: "MAR00630" - - name: "" + - name: "phosphatidylcholine 2-acylhydrolase" - metabolites: !!omap - MAM00656c: 1 - MAM02039c: 1 @@ -134371,7 +134395,7 @@ - confidence_score: 0 - !!omap - id: "MAR00632" - - name: "" + - name: "Acyl-CoA:1-acyl-sn-glycero-3-phosphocholine O-acyltransferase" - metabolites: !!omap - MAM00656c: -1 - MAM01597c: 1 @@ -134389,7 +134413,7 @@ - confidence_score: 0 - !!omap - id: "MAR00633" - - name: "" + - name: "1-Acyl-sn-glycero-3-phosphocholine acylhydrolase" - metabolites: !!omap - MAM00656c: -1 - MAM02039c: 1 @@ -134408,7 +134432,7 @@ - confidence_score: 0 - !!omap - id: "MAR00634" - - name: "" + - name: "Phosphatidylcholine:sterol O-acyltransferase" - metabolites: !!omap - MAM00656c: 1 - MAM01450c: -1 @@ -134426,7 +134450,7 @@ - confidence_score: 0 - !!omap - id: "MAR00635" - - name: "" + - name: "sn-Glycero-3-phosphocholine glycerophosphohydrolase" - metabolites: !!omap - MAM01513c: 1 - MAM02039c: 1 @@ -134445,7 +134469,7 @@ - confidence_score: 0 - !!omap - id: "MAR00636" - - name: "" + - name: "ATP:choline phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -134464,7 +134488,7 @@ - confidence_score: 0 - !!omap - id: "MAR00638" - - name: "" + - name: "CTP:choline-phosphate cytidylyltransferase" - metabolites: !!omap - MAM01425c: 1 - MAM01623c: -1 @@ -134483,7 +134507,7 @@ - confidence_score: 0 - !!omap - id: "MAR00640" - - name: "" + - name: "Acetyl-CoA:choline O-acetyltransferase" - metabolites: !!omap - MAM01260c: 1 - MAM01261c: -1 @@ -134501,7 +134525,7 @@ - confidence_score: 0 - !!omap - id: "MAR00641" - - name: "" + - name: "Acetylcholine aectylhydrolase" - metabolites: !!omap - MAM01252c: 1 - MAM01260c: -1 @@ -134520,7 +134544,7 @@ - confidence_score: 0 - !!omap - id: "MAR00642" - - name: "" + - name: "phosphatidylethanolamine phosphatidohydrolase" - metabolites: !!omap - MAM01797c: 1 - MAM02039c: 1 @@ -134539,7 +134563,7 @@ - confidence_score: 0 - !!omap - id: "MAR00643" - - name: "" + - name: "phosphatidylethanolamine 2-acylhydrolase" - metabolites: !!omap - MAM00511c: 1 - MAM02039c: 1 @@ -134558,7 +134582,7 @@ - confidence_score: 0 - !!omap - id: "MAR00644" - - name: "" + - name: "Acyl-CoA:1-acyl-sn-glycero-3-phosphoethanolamine O-acyltransferase" - metabolites: !!omap - MAM00511c: -1 - MAM01597c: 1 @@ -134576,7 +134600,7 @@ - confidence_score: 0 - !!omap - id: "MAR00645" - - name: "" + - name: "1-Acyl-sn-glycero-3-phosphoethanolamine aldehydohydrolase" - metabolites: !!omap - MAM00511c: -1 - MAM02039c: 1 @@ -134595,7 +134619,7 @@ - confidence_score: 0 - !!omap - id: "MAR00646" - - name: "" + - name: "sn-Glycero-3-phosphoethanolamine glycerophosphohydrolase" - metabolites: !!omap - MAM01797c: 1 - MAM02039c: 1 @@ -134614,7 +134638,7 @@ - confidence_score: 0 - !!omap - id: "MAR00647" - - name: "" + - name: "ethanolamine ammonia-lyase (acetaldehyde-forming)" - metabolites: !!omap - MAM01249c: 1 - MAM01797c: -1 @@ -134632,7 +134656,7 @@ - confidence_score: 0 - !!omap - id: "MAR00648" - - name: "" + - name: "ATP:ethanolamine O-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -134651,7 +134675,7 @@ - confidence_score: 0 - !!omap - id: "MAR00649" - - name: "" + - name: "Phosphoethanolamine phosphohydrolase" - metabolites: !!omap - MAM01797c: 1 - MAM01798c: -1 @@ -134669,7 +134693,7 @@ - confidence_score: 0 - !!omap - id: "MAR00651" - - name: "" + - name: "CTP:ethanolamine-phosphate cytidylyltransferase" - metabolites: !!omap - MAM01428c: 1 - MAM01623c: -1 @@ -134688,7 +134712,7 @@ - confidence_score: 0 - !!omap - id: "MAR00653" - - name: "" + - name: "S-adenosyl-L-methionine:phosphatidylethanolamine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02685c: -1 @@ -134707,7 +134731,7 @@ - confidence_score: 0 - !!omap - id: "MAR00654" - - name: "" + - name: "S-adenosyl-L-methionine:phosphatidyl-N-methylethanolamine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02686c: -1 @@ -134726,7 +134750,7 @@ - confidence_score: 0 - !!omap - id: "MAR00657" - - name: "" + - name: "S-adenosyl-L-methionine:phosphatidyl-N-dimethylethanolamine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02684c: 1 @@ -134764,7 +134788,7 @@ - confidence_score: 0 - !!omap - id: "MAR04627" - - name: "" + - name: "S-Adenosyl-L-methionine:ethanolamine-phosphate N-methyltransferase" - metabolites: !!omap - MAM01798c: -1 - MAM02039c: 1 @@ -134783,7 +134807,7 @@ - confidence_score: 0 - !!omap - id: "MAR04838" - - name: "" + - name: "S-Adenosyl-L-methionine:methylethanolamine phosphate N-methyltransferase" - metabolites: !!omap - MAM02039c: 2 - MAM02600c: -1 @@ -134802,7 +134826,7 @@ - confidence_score: 0 - !!omap - id: "MAR04839" - - name: "" + - name: "S-Adenosyl-L-methionine:phosphodimethylethanolamine N-methyltransferase" - metabolites: !!omap - MAM02738c: 1 - MAM02739c: -1 @@ -134839,7 +134863,7 @@ - confidence_score: 0 - !!omap - id: "MAR07594" - - name: "" + - name: "1-Acyl-glycerone-3-phosphate:long-chain-alcohol O-3-phospho-2-oxopropanyltransferase" - metabolites: !!omap - MAM01278x: -1 - MAM01311x: 1 @@ -134879,7 +134903,7 @@ - confidence_score: 0 - !!omap - id: "MAR07601" - - name: "" + - name: "plasmanylethanolamine,ferrocytochrome b5:oxygen oxidoreductase (plasmenylethanolamine-forming)" - metabolites: !!omap - MAM00515c: -1 - MAM02039c: -1 @@ -134900,7 +134924,7 @@ - confidence_score: 0 - !!omap - id: "MAR07611" - - name: "" + - name: "1-Alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase" - metabolites: !!omap - MAM00549c: 1 - MAM00626c: -1 @@ -134919,7 +134943,7 @@ - confidence_score: 0 - !!omap - id: "MAR07612" - - name: "" + - name: "1-Alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase" - metabolites: !!omap - MAM00549e: 1 - MAM00626e: -1 @@ -134938,7 +134962,7 @@ - confidence_score: 0 - !!omap - id: "MAR07613" - - name: "" + - name: "Acetyl-CoA:1-alkyl-sn-glycero-3-phosphocholine 2-O-acetyltransferase" - metabolites: !!omap - MAM00549c: -1 - MAM00626c: 1 @@ -134956,7 +134980,7 @@ - confidence_score: 0 - !!omap - id: "MAR07755" - - name: "" + - name: "ATP:glycerone phosphotransferase" - metabolites: !!omap - MAM01285e: 1 - MAM01371e: -1 @@ -134975,7 +134999,7 @@ - confidence_score: 0 - !!omap - id: "MAR08362" - - name: "" + - name: "Acetyl-CoA:choline O-acetyltransferase" - metabolites: !!omap - MAM01260n: -1 - MAM01261n: 1 @@ -134993,7 +135017,7 @@ - confidence_score: 0 - !!omap - id: "MAR08421" - - name: "" + - name: "Acetylcholine aectylhydrolase" - metabolites: !!omap - MAM01252e: 1 - MAM01260e: -1 @@ -135012,7 +135036,7 @@ - confidence_score: 0 - !!omap - id: "MAR08424" - - name: "" + - name: "Phosphocholine phosphohydrolase" - metabolites: !!omap - MAM01513c: 1 - MAM02040c: -1 @@ -135030,7 +135054,7 @@ - confidence_score: 0 - !!omap - id: "MAR08518" - - name: "" + - name: "1-Alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase" - metabolites: !!omap - MAM00516c: 1 - MAM00626c: -1 @@ -135049,7 +135073,7 @@ - confidence_score: 0 - !!omap - id: "MAR08519" - - name: "" + - name: "1-Alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase" - metabolites: !!omap - MAM00516e: 1 - MAM00626e: -1 @@ -135068,7 +135092,7 @@ - confidence_score: 0 - !!omap - id: "MAR08521" - - name: "" + - name: "Acetyl-CoA:1-alkyl-sn-glycero-3-phosphocholine 2-O-acetyltransferase" - metabolites: !!omap - MAM00516c: -1 - MAM00626c: 1 @@ -135105,7 +135129,7 @@ - confidence_score: 0 - !!omap - id: "MAR08523" - - name: "" + - name: "phosphatidylcholine phosphatidohydrolase" - metabolites: !!omap - MAM01513g: 1 - MAM02039g: 1 @@ -135124,7 +135148,7 @@ - confidence_score: 0 - !!omap - id: "MAR08525" - - name: "" + - name: "phosphatidylcholine phosphatidohydrolase" - metabolites: !!omap - MAM01513r: 1 - MAM02039r: 1 @@ -135143,7 +135167,7 @@ - confidence_score: 0 - !!omap - id: "MAR09805" - - name: "" + - name: "sn-Glycero-3-phosphocholine cholinephosphohydrolase" - metabolites: !!omap - MAM01983c: 1 - MAM02039c: 1 @@ -136192,7 +136216,7 @@ - confidence_score: 0 - !!omap - id: "MAR00866" - - name: "" + - name: "Galactoside alpha-1,2-L-fucosyltransferase" - metabolites: !!omap - MAM01873c: -1 - MAM01948c: 1 @@ -137009,7 +137033,7 @@ - confidence_score: 0 - !!omap - id: "MAR00912" - - name: "" + - name: "UDP-alpha-D-galactose:sphingosine 1-beta-galactosyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02810c: 1 @@ -137028,7 +137052,7 @@ - confidence_score: 0 - !!omap - id: "MAR00787" - - name: "" + - name: "D-Glucosyl-N-acylsphingosine glucohydrolase" - metabolites: !!omap - MAM01430l: 1 - MAM01965l: 1 @@ -137046,7 +137070,7 @@ - confidence_score: 0 - !!omap - id: "MAR00790" - - name: "" + - name: "Sulfatide sulfohydrolase" - metabolites: !!omap - MAM01679l: 1 - MAM02039l: 1 @@ -137065,7 +137089,7 @@ - confidence_score: 0 - !!omap - id: "MAR00792" - - name: "" + - name: "3'-Phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase" - metabolites: !!omap - MAM01679l: -1 - MAM02039l: 1 @@ -137102,7 +137126,7 @@ - confidence_score: 0 - !!omap - id: "MAR00794" - - name: "" + - name: "3beta-Hydroxyandrost-5-en-17-one 3-sulfate sulfohydrolase" - metabolites: !!omap - MAM01659c: -1 - MAM01660c: 1 @@ -137121,7 +137145,7 @@ - confidence_score: 0 - !!omap - id: "MAR00797" - - name: "" + - name: "Sphingomyelin cholinephosphohydrolase" - metabolites: !!omap - MAM01430l: 1 - MAM02039l: 1 @@ -137212,7 +137236,7 @@ - confidence_score: 0 - !!omap - id: "MAR00834" - - name: "" + - name: "Acylneuraminyl hydrolase" - metabolites: !!omap - MAM01679l: 1 - MAM02039l: 1 @@ -137285,7 +137309,7 @@ - confidence_score: 0 - !!omap - id: "MAR00915" - - name: "" + - name: "3'-Phosphoadenylylsulfate:galactosylsphingosine sulfotransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02681c: 1 @@ -137304,7 +137328,7 @@ - confidence_score: 0 - !!omap - id: "MAR00919" - - name: "" + - name: "UDP-alpha-D-galactose:N-acylsphingosine D-galactosyltransferase" - metabolites: !!omap - MAM01430c: -1 - MAM01679c: 1 @@ -137323,7 +137347,7 @@ - confidence_score: 0 - !!omap - id: "MAR00920" - - name: "" + - name: "UDP-alpha-D-galactose:N-acylsphingosine D-galactosyltransferase" - metabolites: !!omap - MAM01430g: -1 - MAM01679g: 1 @@ -137342,7 +137366,7 @@ - confidence_score: 0 - !!omap - id: "MAR00921" - - name: "" + - name: "UDP-alpha-D-galactose:N-acylsphingosine D-galactosyltransferase" - metabolites: !!omap - MAM01430r: -1 - MAM01679r: 1 @@ -137399,7 +137423,7 @@ - confidence_score: 0 - !!omap - id: "MAR00926" - - name: "" + - name: "UDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase" - metabolites: !!omap - MAM01972c: -1 - MAM02039c: 1 @@ -137418,7 +137442,7 @@ - confidence_score: 0 - !!omap - id: "MAR07188" - - name: "" + - name: "glycoprotein-phosphatidylinositol phosphatidohydrolase" - metabolites: !!omap - MAM01142r: 1 - MAM01143r: -1 @@ -137437,7 +137461,7 @@ - confidence_score: 0 - !!omap - id: "MAR08378" - - name: "" + - name: "dolichyl-beta-D-mannosyl-phosphate:protein-serine O-D-mannosyltransferase" - metabolites: !!omap - MAM00205c: 1 - MAM01733c: -1 @@ -137989,7 +138013,7 @@ - confidence_score: 0 - !!omap - id: "MAR01979" - - name: "" + - name: "Pregnenolone:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02552c: -1 @@ -138108,7 +138132,7 @@ - confidence_score: 0 - !!omap - id: "MAR01995" - - name: "" + - name: "steroid,reduced ferredoxin:oxygen oxidoreductase (11-hydroxylating)" - metabolites: !!omap - MAM00295m: -1 - MAM01615m: 1 @@ -138129,7 +138153,7 @@ - confidence_score: 0 - !!omap - id: "MAR01996" - - name: "" + - name: "Cortisol:NADP+ 11-oxidoreductase" - metabolites: !!omap - MAM01615c: -1 - MAM01616c: 1 @@ -138214,7 +138238,7 @@ - confidence_score: 0 - !!omap - id: "MAR01305" - - name: "" + - name: "Arachidonate:oxygen oxidoreductase" - metabolites: !!omap - MAM01362r: -1 - MAM02630r: -2 @@ -138249,7 +138273,7 @@ - confidence_score: 0 - !!omap - id: "MAR01308" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13- dienoate 6-isomerase" - metabolites: !!omap - MAM02794r: -1 - MAM02795r: 1 @@ -138282,7 +138306,7 @@ - confidence_score: 0 - !!omap - id: "MAR01312" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13- dienoate E-isomerase" - metabolites: !!omap - MAM02786c: 1 - MAM02794c: -1 @@ -138298,7 +138322,7 @@ - confidence_score: 0 - !!omap - id: "MAR01313" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-thromboxane-A2-isomerase" - metabolites: !!omap - MAM02794r: -1 - MAM02994r: 1 @@ -138510,7 +138534,7 @@ - confidence_score: 0 - !!omap - id: "MAR01327" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 9-oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02554c: -1 @@ -138529,7 +138553,7 @@ - confidence_score: 0 - !!omap - id: "MAR01328" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha,15-Trihydroxyprosta-5,13-dienoate:NAD+ 15-oxidoreductase" - metabolites: !!omap - MAM00392c: -1 - MAM02039c: -1 @@ -138548,7 +138572,7 @@ - confidence_score: 0 - !!omap - id: "MAR01329" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 11-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02554c: 1 @@ -138567,7 +138591,7 @@ - confidence_score: 0 - !!omap - id: "MAR01330" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13- dienoate D-isomerase" - metabolites: !!omap - MAM02783c: 1 - MAM02794c: -1 @@ -138651,7 +138675,7 @@ - confidence_score: 0 - !!omap - id: "MAR01336" - - name: "" + - name: "(5Z,13E)-(15S)-9alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate:NADP+ 15-oxidoreductase" - metabolites: !!omap - MAM00381c: -1 - MAM02039c: -1 @@ -138815,7 +138839,7 @@ - confidence_score: 0 - !!omap - id: "MAR01346" - - name: "" + - name: "fatty acylamide amidohydrolase" - metabolites: !!omap - MAM01335c: 1 - MAM01362c: -1 @@ -139545,7 +139569,7 @@ - confidence_score: 0 - !!omap - id: "MAR07598" - - name: "" + - name: "1-Alkyl-2-acyl-sn-glycero-3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00514c: 1 - MAM00628c: -1 @@ -139582,7 +139606,7 @@ - confidence_score: 0 - !!omap - id: "MAR07602" - - name: "" + - name: "Acyl-CoA:1-alkenylglycerophosphoethanolamine O-acyltransferase" - metabolites: !!omap - MAM00223c: -1 - MAM01597c: 1 @@ -139600,7 +139624,7 @@ - confidence_score: 0 - !!omap - id: "MAR07603" - - name: "" + - name: "plasmenylethanolamine 2-acylhydrolase" - metabolites: !!omap - MAM00223c: 1 - MAM02039c: 1 @@ -139657,7 +139681,7 @@ - confidence_score: 0 - !!omap - id: "MAR07606" - - name: "" + - name: "Lysoplasmalogen ethanolamine phosphohydrolase" - metabolites: !!omap - MAM00223c: -1 - MAM00224c: 1 @@ -139676,7 +139700,7 @@ - confidence_score: 0 - !!omap - id: "MAR07607" - - name: "" + - name: "1-(1-Alkenyl)-sn-glycero-3-phosphoethanolamine ethanolaminehydrolase" - metabolites: !!omap - MAM00222c: 1 - MAM00223c: -1 @@ -139695,7 +139719,7 @@ - confidence_score: 0 - !!omap - id: "MAR07610" - - name: "" + - name: "CDP-choline:1-alkyl-2-acetylglycerol cholinephosphotransferase" - metabolites: !!omap - MAM00513c: -1 - MAM00626c: 1 @@ -139714,7 +139738,7 @@ - confidence_score: 0 - !!omap - id: "MAR07614" - - name: "" + - name: "Acyl-CoA:1-alkyl-sn-glycero-3-phosphocholine O-acyltransferase" - metabolites: !!omap - MAM00549c: -1 - MAM00560c: 1 @@ -139732,7 +139756,7 @@ - confidence_score: 0 - !!omap - id: "MAR07615" - - name: "" + - name: "plasmanylcholine 2-acylhydrolase" - metabolites: !!omap - MAM00549c: 1 - MAM00560c: -1 @@ -140151,7 +140175,7 @@ - confidence_score: 0 - !!omap - id: "MAR07217" - - name: "" + - name: "heparosan-N-sulfate-D-glucuronate glucurono-5-epimerase" - metabolites: !!omap - MAM02082g: -1 - MAM02083g: 1 @@ -144620,7 +144644,7 @@ - confidence_score: 0 - !!omap - id: "MAR08643" - - name: "" + - name: "cocaine benzoylhydrolase" - metabolites: !!omap - MAM01380c: 1 - MAM01601c: -1 @@ -144639,7 +144663,7 @@ - confidence_score: 0 - !!omap - id: "MAR08645" - - name: "" + - name: "cocaine benzoylhydrolase" - metabolites: !!omap - MAM01380r: 1 - MAM01601r: -1 @@ -144677,7 +144701,7 @@ - confidence_score: 0 - !!omap - id: "MAR01581" - - name: "" + - name: "cholesterol,NADPH-hemoprotein reductase:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM01183r: 1 - MAM01450r: -1 @@ -144698,7 +144722,7 @@ - confidence_score: 0 - !!omap - id: "MAR01584" - - name: "" + - name: "7alpha-Hydroxycholesterol:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM01182r: 1 - MAM01183r: -1 @@ -144717,7 +144741,7 @@ - confidence_score: 0 - !!omap - id: "MAR01585" - - name: "" + - name: "Cholest-5-ene-3beta,7alpha-diol:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM01182r: 1 - MAM01183r: -1 @@ -144736,7 +144760,7 @@ - confidence_score: 0 - !!omap - id: "MAR01589" - - name: "" + - name: "7alpha-hydroxycholest-4-en-3-one,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (12alpha-hydroxylating)" - metabolites: !!omap - MAM01178r: 1 - MAM01182r: -1 @@ -144815,7 +144839,7 @@ - confidence_score: 0 - !!omap - id: "MAR01595" - - name: "" + - name: "7alpha-Hydroxy-5beta-cholestan-3-one:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM01177c: 1 - MAM01178c: -1 @@ -144834,7 +144858,7 @@ - confidence_score: 0 - !!omap - id: "MAR01598" - - name: "" + - name: "3alpha,7alpha,12alpha-Trihydroxy-5beta-cholestane:NAD+ oxidoreductase (B-specific)" - metabolites: !!omap - MAM01078c: 1 - MAM01177c: -1 @@ -144853,7 +144877,7 @@ - confidence_score: 0 - !!omap - id: "MAR01599" - - name: "" + - name: "3alpha,7alpha,12alpha-Trihydroxy-5beta-cholestane:NADP+ oxidoreductase (B-specific)" - metabolites: !!omap - MAM01078c: 1 - MAM01177c: -1 @@ -144971,7 +144995,7 @@ - confidence_score: 0 - !!omap - id: "MAR01611" - - name: "" + - name: "3alpha,7alpha,12alpha-Trihydroxy-5beta-cholestan-26-al:NAD+ 26-oxidoreductase" - metabolites: !!omap - MAM00750c: -1 - MAM00752c: 1 @@ -145047,7 +145071,7 @@ - confidence_score: 0 - !!omap - id: "MAR01620" - - name: "" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00752c: -1 - MAM00752m: 1 @@ -145100,7 +145124,7 @@ - confidence_score: 0 - !!omap - id: "MAR01624" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00616r: 1 - MAM00752r: -1 @@ -145120,7 +145144,7 @@ - confidence_score: 0 - !!omap - id: "MAR01625" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00616x: 1 - MAM00752x: -1 @@ -145140,7 +145164,7 @@ - confidence_score: 0 - !!omap - id: "MAR01627" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00616c: 1 - MAM00752c: -1 @@ -145208,7 +145232,7 @@ - confidence_score: 0 - !!omap - id: "MAR01632" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA 25-epimerase" - metabolites: !!omap - MAM00616x: -1 - MAM00618x: 1 @@ -145224,7 +145248,7 @@ - confidence_score: 0 - !!omap - id: "MAR01635" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA 25-epimerase" - metabolites: !!omap - MAM00616m: -1 - MAM00618m: 1 @@ -145296,7 +145320,7 @@ - confidence_score: 0 - !!omap - id: "MAR01642" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA-forming]" - metabolites: !!omap - MAM00036x: 1 - MAM00749x: -1 @@ -145313,7 +145337,7 @@ - confidence_score: 0 - !!omap - id: "MAR01646" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00036x: -1 - MAM00748x: 1 @@ -145332,7 +145356,7 @@ - confidence_score: 0 - !!omap - id: "MAR01652" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00748x: -1 - MAM01514x: 1 @@ -145350,7 +145374,7 @@ - confidence_score: 0 - !!omap - id: "MAR01653" - - name: "" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00748m: -1 - MAM01514m: 1 @@ -145405,7 +145429,7 @@ - confidence_score: 0 - !!omap - id: "MAR01660" - - name: "" + - name: "choloyl-CoA hydrolase" - metabolites: !!omap - MAM01445c: 1 - MAM01514c: -1 @@ -145424,7 +145448,7 @@ - confidence_score: 0 - !!omap - id: "MAR01662" - - name: "" + - name: "choloyl-CoA hydrolase" - metabolites: !!omap - MAM01445m: 1 - MAM01514m: -1 @@ -145443,7 +145467,7 @@ - confidence_score: 0 - !!omap - id: "MAR01663" - - name: "" + - name: "choloyl-CoA hydrolase" - metabolites: !!omap - MAM01445x: 1 - MAM01514x: -1 @@ -145494,7 +145518,7 @@ - confidence_score: 0 - !!omap - id: "MAR01667" - - name: "" + - name: "Choloyl-CoA:glycine N-choloyltransferase" - metabolites: !!omap - MAM01514x: -1 - MAM01597x: 1 @@ -145512,7 +145536,7 @@ - confidence_score: 0 - !!omap - id: "MAR01668" - - name: "" + - name: "Choloyl-CoA:glycine N-choloyltransferase" - metabolites: !!omap - MAM01514c: -1 - MAM01597c: 1 @@ -145530,7 +145554,7 @@ - confidence_score: 0 - !!omap - id: "MAR01670" - - name: "" + - name: "Choloyl-CoA:glycine N-choloyltransferase" - metabolites: !!omap - MAM01514c: -1 - MAM01597c: 1 @@ -145548,7 +145572,7 @@ - confidence_score: 0 - !!omap - id: "MAR01673" - - name: "" + - name: "7alpha-Hydroxy-5beta-cholestan-3-one:NADP+ delta4-oxidoreductase" - metabolites: !!omap - MAM01181c: 1 - MAM01182c: -1 @@ -145567,7 +145591,7 @@ - confidence_score: 0 - !!omap - id: "MAR01676" - - name: "" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestane:NADP+ oxidoreductase (B-specific)" - metabolites: !!omap - MAM01095c: 1 - MAM01181c: -1 @@ -145586,7 +145610,7 @@ - confidence_score: 0 - !!omap - id: "MAR01678" - - name: "" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestane:NAD+ oxidoreductase (B-specific)" - metabolites: !!omap - MAM01095c: 1 - MAM01181c: -1 @@ -145761,7 +145785,7 @@ - confidence_score: 0 - !!omap - id: "MAR01692" - - name: "" + - name: "3alpha,7alpha-Dihydroxy-5beta-cholestan-26-al:NAD+ oxidoreductase" - metabolites: !!omap - MAM00756c: -1 - MAM00758c: 1 @@ -145854,7 +145878,7 @@ - confidence_score: 0 - !!omap - id: "MAR01697" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00614c: 1 - MAM00758c: -1 @@ -145874,7 +145898,7 @@ - confidence_score: 0 - !!omap - id: "MAR01699" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00614r: 1 - MAM00758r: -1 @@ -145894,7 +145918,7 @@ - confidence_score: 0 - !!omap - id: "MAR01700" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM00614x: 1 - MAM00758x: -1 @@ -145951,7 +145975,7 @@ - confidence_score: 0 - !!omap - id: "MAR01703" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholestanoyl-CoA 25-epimerase" - metabolites: !!omap - MAM00614x: -1 - MAM00617x: 1 @@ -145985,7 +146009,7 @@ - confidence_score: 0 - !!omap - id: "MAR01706" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,24-trihydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha-Dihydroxy-5beta-cholest-24-enoyl-CoA-forming]" - metabolites: !!omap - MAM00037x: 1 - MAM00755x: -1 @@ -146002,7 +146026,7 @@ - confidence_score: 0 - !!omap - id: "MAR01708" - - name: "" + - name: "(24R,25R)-3alpha,7alpha,24-trihydroxy-5beta-cholestanoyl-CoA:NAD+ oxidoreductase" - metabolites: !!omap - MAM00037x: -1 - MAM00754x: 1 @@ -146021,7 +146045,7 @@ - confidence_score: 0 - !!omap - id: "MAR01710" - - name: "" + - name: "Propanoyl-CoA:acetyl-CoA C-acyltransferase" - metabolites: !!omap - MAM00754x: -1 - MAM01434x: 1 @@ -146039,7 +146063,7 @@ - confidence_score: 0 - !!omap - id: "MAR01716" - - name: "" + - name: "chenodeoxycholoyl-CoA hydrolase" - metabolites: !!omap - MAM01434x: -1 - MAM01435x: 1 @@ -146074,7 +146098,7 @@ - confidence_score: 0 - !!omap - id: "MAR01718" - - name: "" + - name: "chenodeoxycholoyl-CoA hydrolase" - metabolites: !!omap - MAM01434c: -1 - MAM01435c: 1 @@ -146093,7 +146117,7 @@ - confidence_score: 0 - !!omap - id: "MAR01720" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholanoyl-CoA:taurine N-choloyltransferase" - metabolites: !!omap - MAM01434x: -1 - MAM01597x: 1 @@ -146111,7 +146135,7 @@ - confidence_score: 0 - !!omap - id: "MAR01722" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholanoyl-CoA:glycine N-choloyltransferase" - metabolites: !!omap - MAM01434c: -1 - MAM01597c: 1 @@ -146129,7 +146153,7 @@ - confidence_score: 0 - !!omap - id: "MAR01723" - - name: "" + - name: "3alpha,7alpha-dihydroxy-5beta-cholanoyl-CoA:taurine N-choloyltransferase" - metabolites: !!omap - MAM01434c: -1 - MAM01597c: 1 @@ -146163,7 +146187,7 @@ - confidence_score: 0 - !!omap - id: "MAR01726" - - name: "" + - name: "chenodeoxycholate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01371c: 1 @@ -146183,7 +146207,7 @@ - confidence_score: 0 - !!omap - id: "MAR01727" - - name: "" + - name: "chenodeoxycholate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334r: -1 - MAM01371r: 1 @@ -146241,7 +146265,7 @@ - confidence_score: 0 - !!omap - id: "MAR01735" - - name: "" + - name: "cholesterol,NADPH-hemoprotein reductase:oxygen oxidoreductase (24-hydroxylating)" - metabolites: !!omap - MAM00610c: 1 - MAM01450c: -1 @@ -146691,7 +146715,7 @@ - confidence_score: 0 - !!omap - id: "MAR01762" - - name: "" + - name: "cholesterol,NADPH:oxygen oxidoreductase (5alpha,6alpha-epoxidizing)" - metabolites: !!omap - MAM00625m: 1 - MAM01450m: -1 @@ -146728,7 +146752,7 @@ - confidence_score: 0 - !!omap - id: "MAR01765" - - name: "" + - name: "cholest-5-ene-3beta,26-diol,[NADPH---hemoprotein reductase]:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM00625c: -1 - MAM01448c: 1 @@ -146918,7 +146942,7 @@ - confidence_score: 0 - !!omap - id: "MAR01777" - - name: "" + - name: "cholest-5-ene-3beta,25-diol,[NADPH---hemoprotein reductase]:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM00619r: -1 - MAM01447r: 1 @@ -146939,7 +146963,7 @@ - confidence_score: 0 - !!omap - id: "MAR01778" - - name: "" + - name: "cholest-5-ene-3beta,7alpha,25-triol:NAD+ 3-oxidoreductase" - metabolites: !!omap - MAM01179r: -1 - MAM01447r: 1 @@ -146998,7 +147022,7 @@ - confidence_score: 0 - !!omap - id: "MAR01784" - - name: "" + - name: "cholesterol 26-hydroxylase" - metabolites: !!omap - MAM00623m: 1 - MAM01450m: -1 @@ -147019,7 +147043,7 @@ - confidence_score: 0 - !!omap - id: "MAR01785" - - name: "" + - name: "cholesterol 26-hydroxylase" - metabolites: !!omap - MAM00623r: 1 - MAM01450r: -1 @@ -147040,7 +147064,7 @@ - confidence_score: 0 - !!omap - id: "MAR01786" - - name: "" + - name: "cholesterol 26-hydroxylase" - metabolites: !!omap - MAM00623c: 1 - MAM01450c: -1 @@ -147159,7 +147183,7 @@ - confidence_score: 0 - !!omap - id: "MAR01797" - - name: "" + - name: "cholest-5-ene-3beta,26-diol,[NADPH---hemoprotein reductase]:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM00623c: -1 - MAM01448c: 1 @@ -147180,7 +147204,7 @@ - confidence_score: 0 - !!omap - id: "MAR01798" - - name: "" + - name: "cholest-5-ene-3beta,26-diol,[NADPH---hemoprotein reductase]:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM00623m: -1 - MAM01448m: 1 @@ -147201,7 +147225,7 @@ - confidence_score: 0 - !!omap - id: "MAR01800" - - name: "" + - name: "cholest-5-ene-3beta,26-diol,[NADPH---hemoprotein reductase]:oxygen oxidoreductase (7alpha-hydroxylating)" - metabolites: !!omap - MAM00761m: 1 - MAM01448m: -1 @@ -147546,7 +147570,7 @@ - confidence_score: 0 - !!omap - id: "MAR01834" - - name: "" + - name: "Glycodeoxycholate amidohydrolase" - metabolites: !!omap - MAM00745c: -1 - MAM01986c: -1 @@ -147619,7 +147643,7 @@ - confidence_score: 0 - !!omap - id: "MAR01838" - - name: "" + - name: "lithocholate,[reduced NADPH---hemoprotein reductase]:oxygen oxidoreductase (6alpha-hydroxylating)" - metabolites: !!omap - MAM02039c: -2 - MAM02040c: 1 @@ -147724,7 +147748,7 @@ - confidence_score: 0 - !!omap - id: "MAR01843" - - name: "" + - name: "3'-Phosphoadenylylsulfate:taurolithocholate sulfotransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02681c: 1 @@ -147823,7 +147847,7 @@ - confidence_score: 0 - !!omap - id: "MAR03908" - - name: "" + - name: "L-Cysteine:oxygen oxidoreductase" - metabolites: !!omap - MAM00918c: 1 - MAM01628c: -1 @@ -147841,7 +147865,7 @@ - confidence_score: 0 - !!omap - id: "MAR03910" - - name: "" + - name: "3-sulfino-L-alanine carboxy-lyase" - metabolites: !!omap - MAM00918c: -1 - MAM01596c: 1 @@ -147859,7 +147883,7 @@ - confidence_score: 0 - !!omap - id: "MAR03911" - - name: "" + - name: "hypotaurine:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 1 @@ -147879,7 +147903,7 @@ - confidence_score: 0 - !!omap - id: "MAR04679" - - name: "" + - name: "Cysteamine:oxygen oxidoreductase" - metabolites: !!omap - MAM01627c: -1 - MAM02039c: 1 @@ -147933,7 +147957,7 @@ - confidence_score: 0 - !!omap - id: "MAR08065" - - name: "" + - name: "3-sulfo-L-alanine carboxy-lyase (taurine-forming)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -147987,7 +148011,7 @@ - confidence_score: 0 - !!omap - id: "MAR01848" - - name: "" + - name: "Cholate:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01334r: -1 - MAM01371r: 1 @@ -150222,7 +150246,7 @@ - confidence_score: 0 - !!omap - id: "MAR00712" - - name: "" + - name: "Isocitrate:NADP+ oxidoreductase (decarboxylating)" - metabolites: !!omap - MAM01306x: 1 - MAM01596x: 1 @@ -150241,7 +150265,7 @@ - confidence_score: 0 - !!omap - id: "MAR03992" - - name: "" + - name: "NADH:ferricytochrome-b5 oxidoreductase" - metabolites: !!omap - MAM01823c: -2 - MAM01825c: 2 @@ -150260,7 +150284,7 @@ - confidence_score: 0 - !!omap - id: "MAR04228" - - name: "" + - name: "3-Hydroxyanthranilate:oxygen 3,4-oxidoreductase (decyclizing)" - metabolites: !!omap - MAM00629c: 1 - MAM00775c: -1 @@ -150278,7 +150302,7 @@ - confidence_score: 0 - !!omap - id: "MAR04251" - - name: "" + - name: "Nicotinate-nucleotide:pyrophosphate phosphoribosyltransferase (carboxylating)" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -2 @@ -150298,7 +150322,7 @@ - confidence_score: 0 - !!omap - id: "MAR04252" - - name: "" + - name: "nicotinate D-ribonucleotide phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02584c: 1 @@ -150316,7 +150340,7 @@ - confidence_score: 0 - !!omap - id: "MAR04253" - - name: "" + - name: "ATP:beta-D-ribosylnicotinate 5-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -150335,7 +150359,7 @@ - confidence_score: 0 - !!omap - id: "MAR04254" - - name: "" + - name: "5-phospho-alpha-D-ribose 1-diphosphate:nicotinate ligase (ADP, diphosphate-forming)" - metabolites: !!omap - MAM02039c: -1 - MAM02585c: 1 @@ -150354,7 +150378,7 @@ - confidence_score: 0 - !!omap - id: "MAR04255" - - name: "" + - name: "Deamino-NAD+ nucleotidohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM01646c: -1 @@ -150373,7 +150397,7 @@ - confidence_score: 0 - !!omap - id: "MAR04257" - - name: "" + - name: "ATP:nicotinamide-nucleotide adenylyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM01646c: 1 @@ -150392,7 +150416,7 @@ - confidence_score: 0 - !!omap - id: "MAR04259" - - name: "" + - name: "nicotinamide-D-ribonucleotide amidohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -150411,7 +150435,7 @@ - confidence_score: 0 - !!omap - id: "MAR04260" - - name: "" + - name: "Deamido-NAD+:L-glutamine amido-ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -150434,7 +150458,7 @@ - confidence_score: 0 - !!omap - id: "MAR04261" - - name: "" + - name: "deamido-NAD+:ammonia ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -150454,7 +150478,7 @@ - confidence_score: 0 - !!omap - id: "MAR04262" - - name: "" + - name: "nicotinamide-D-ribonucleotide:diphosphate phospho-alpha-D-ribosyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02581c: -1 @@ -150548,7 +150572,7 @@ - confidence_score: 0 - !!omap - id: "MAR04268" - - name: "" + - name: "ATP:NAD+ 2'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -150567,7 +150591,7 @@ - confidence_score: 0 - !!omap - id: "MAR04269" - - name: "" + - name: "ATP:NAD+ 2'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -150586,7 +150610,7 @@ - confidence_score: 0 - !!omap - id: "MAR04270" - - name: "" + - name: "NADP+ 2'-phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02552c: 1 @@ -150604,7 +150628,7 @@ - confidence_score: 0 - !!omap - id: "MAR04271" - - name: "" + - name: "NADPH:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039i: -1 - MAM02039m: 1 @@ -150624,7 +150648,7 @@ - confidence_score: 0 - !!omap - id: "MAR04276" - - name: "" + - name: "ATP:nicotinamide-nucleotide adenylyltransferase" - metabolites: !!omap - MAM01371n: -1 - MAM01646n: 1 @@ -150643,7 +150667,7 @@ - confidence_score: 0 - !!omap - id: "MAR04278" - - name: "" + - name: "deamido-NAD+:ammonia ligase (AMP-forming)" - metabolites: !!omap - MAM01334n: 1 - MAM01371n: -1 @@ -150663,7 +150687,7 @@ - confidence_score: 0 - !!omap - id: "MAR04279" - - name: "" + - name: "ATP:NAD+ 2'-phosphotransferase" - metabolites: !!omap - MAM01285n: 1 - MAM01371n: -1 @@ -150682,7 +150706,7 @@ - confidence_score: 0 - !!omap - id: "MAR04662" - - name: "" + - name: "Nicotinate D-ribonucleoside:orthophosphate ribosyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02584c: -1 @@ -150701,7 +150725,7 @@ - confidence_score: 0 - !!omap - id: "MAR07142" - - name: "" + - name: "NAD+ glycohydrolase" - metabolites: !!omap - MAM01288e: 1 - MAM02039e: 1 @@ -150720,7 +150744,7 @@ - confidence_score: 0 - !!omap - id: "MAR07143" - - name: "" + - name: "NAD+ glycohydrolase" - metabolites: !!omap - MAM01288c: 1 - MAM02039c: 1 @@ -150739,7 +150763,7 @@ - confidence_score: 0 - !!omap - id: "MAR07623" - - name: "" + - name: "NAD+:protein-L-arginine ADP-D-ribosyltransferase" - metabolites: !!omap - MAM00197c: -1 - MAM00215c: 1 @@ -150758,7 +150782,7 @@ - confidence_score: 0 - !!omap - id: "MAR07625" - - name: "" + - name: "NAD+:protein-L-arginine ADP-D-ribosyltransferase" - metabolites: !!omap - MAM00196c: 1 - MAM00197c: -1 @@ -150779,7 +150803,7 @@ - confidence_score: 0 - !!omap - id: "MAR07627" - - name: "" + - name: "NADP+:nicotinate ADP-ribosyltransferase" - metabolites: !!omap - MAM01289c: 1 - MAM02039c: 1 @@ -150798,7 +150822,7 @@ - confidence_score: 0 - !!omap - id: "MAR07676" - - name: "" + - name: "S-Adenosyl-L-methionine:nicotinamide N-methyltransferase" - metabolites: !!omap - MAM00536c: 1 - MAM02583c: -1 @@ -150816,7 +150840,7 @@ - confidence_score: 0 - !!omap - id: "MAR07677" - - name: "" + - name: "Aldehyde:oxygen oxidoreductase" - metabolites: !!omap - MAM00536c: -1 - MAM02039c: 1 @@ -150836,7 +150860,7 @@ - confidence_score: 0 - !!omap - id: "MAR07678" - - name: "" + - name: "Aldehyde:oxygen oxidoreductase" - metabolites: !!omap - MAM00536c: -1 - MAM02039c: 1 @@ -150856,7 +150880,7 @@ - confidence_score: 0 - !!omap - id: "MAR08788" - - name: "" + - name: "NADP+:nicotinate ADP-ribosyltransferase" - metabolites: !!omap - MAM01289e: 1 - MAM02039e: 1 @@ -150913,7 +150937,7 @@ - confidence_score: 0 - !!omap - id: "MAR03871" - - name: "" + - name: "ATP:dephospho-CoA 3'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -150932,7 +150956,7 @@ - confidence_score: 0 - !!omap - id: "MAR04058" - - name: "" + - name: "ATP:dephospho-CoA 3'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -150951,7 +150975,7 @@ - confidence_score: 0 - !!omap - id: "MAR04498" - - name: "" + - name: "[Acyl-carrier-protein] 4'-pantetheine-phosphohydrolase" - metabolites: !!omap - MAM00184c: -1 - MAM01349c: 1 @@ -150970,7 +150994,7 @@ - confidence_score: 0 - !!omap - id: "MAR04499" - - name: "" + - name: "[Acyl-carrier-protein] 4'-pantetheine-phosphohydrolase" - metabolites: !!omap - MAM02039m: -1 - MAM02040m: 1 @@ -150989,7 +151013,7 @@ - confidence_score: 0 - !!omap - id: "MAR04500" - - name: "" + - name: "CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase" - metabolites: !!omap - MAM00184c: 1 - MAM01349c: -1 @@ -151008,7 +151032,7 @@ - confidence_score: 0 - !!omap - id: "MAR04714" - - name: "" + - name: "ATP:pantothenate 4'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -151027,7 +151051,7 @@ - confidence_score: 0 - !!omap - id: "MAR04715" - - name: "" + - name: "ATP:pantothenate 4'-phosphotransferase" - metabolites: !!omap - MAM01285m: 1 - MAM01371m: -1 @@ -151046,7 +151070,7 @@ - confidence_score: 0 - !!omap - id: "MAR04716" - - name: "" + - name: "N-((R)-Pantothenoyl)-L-cysteine carboxy-lyase" - metabolites: !!omap - MAM01596c: 1 - MAM02039c: -1 @@ -151064,7 +151088,7 @@ - confidence_score: 0 - !!omap - id: "MAR04717" - - name: "" + - name: "(R)-pantetheine amidohydrolase" - metabolites: !!omap - MAM01627c: 1 - MAM02040c: -1 @@ -151082,7 +151106,7 @@ - confidence_score: 0 - !!omap - id: "MAR04718" - - name: "" + - name: "ATP:pantothenate 4'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -151101,7 +151125,7 @@ - confidence_score: 0 - !!omap - id: "MAR04723" - - name: "" + - name: "(R)-4'-phosphopantothenate:L-cysteine ligase" - metabolites: !!omap - MAM00163c: 1 - MAM01590c: 1 @@ -151122,7 +151146,7 @@ - confidence_score: 0 - !!omap - id: "MAR04725" - - name: "" + - name: "N-[(R)-4'-Phosphopantothenoyl]-L-cysteine carboxy-lyase" - metabolites: !!omap - MAM00163c: -1 - MAM01596c: 1 @@ -151140,7 +151164,7 @@ - confidence_score: 0 - !!omap - id: "MAR04727" - - name: "" + - name: "ATP:pantetheine-4'-phosphate adenylyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM01674c: 1 @@ -151159,7 +151183,7 @@ - confidence_score: 0 - !!omap - id: "MAR04730" - - name: "" + - name: "ATP:pantothenate 4'-phosphotransferase" - metabolites: !!omap - MAM00163c: -1 - MAM01285c: -1 @@ -151178,7 +151202,7 @@ - confidence_score: 0 - !!omap - id: "MAR04731" - - name: "" + - name: "ATP:pantothenate 4'-phosphotransferase" - metabolites: !!omap - MAM00163m: -1 - MAM01285m: -1 @@ -151197,7 +151221,7 @@ - confidence_score: 0 - !!omap - id: "MAR04732" - - name: "" + - name: "Dephospho-CoA nucleotidohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM01674c: -1 @@ -151216,7 +151240,7 @@ - confidence_score: 0 - !!omap - id: "MAR04733" - - name: "" + - name: "N-[(R)-4'-Phosphopantothenoyl]-L-cysteine carboxy-lyase" - metabolites: !!omap - MAM00163m: -1 - MAM01596m: 1 @@ -151234,7 +151258,7 @@ - confidence_score: 0 - !!omap - id: "MAR04734" - - name: "" + - name: "ATP:pantetheine-4'-phosphate adenylyltransferase" - metabolites: !!omap - MAM01371m: -1 - MAM01674m: 1 @@ -151271,7 +151295,7 @@ - confidence_score: 0 - !!omap - id: "MAR08792" - - name: "" + - name: "pantetheine-4'-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02679c: 1 @@ -151324,7 +151348,7 @@ - confidence_score: 0 - !!omap - id: "MAR06539" - - name: "" + - name: "myo-Inositol:oxygen oxidoreductase" - metabolites: !!omap - MAM01973c: 1 - MAM02039c: 1 @@ -151343,7 +151367,7 @@ - confidence_score: 0 - !!omap - id: "MAR06540" - - name: "" + - name: "1D-myo-inositol 1-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02171c: 1 @@ -151361,7 +151385,7 @@ - confidence_score: 0 - !!omap - id: "MAR06542" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol 3-phosphotransferase" - metabolites: !!omap - MAM00552c: 1 - MAM01285c: 1 @@ -151380,7 +151404,7 @@ - confidence_score: 0 - !!omap - id: "MAR06543" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol 3-phosphate 3-phosphohydrolase" - metabolites: !!omap - MAM00552c: -1 - MAM02040c: -1 @@ -151398,7 +151422,7 @@ - confidence_score: 0 - !!omap - id: "MAR06544" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-3-phosphate 5-phosphotransferase" - metabolites: !!omap - MAM00552c: -1 - MAM00555c: 1 @@ -151435,7 +151459,7 @@ - confidence_score: 0 - !!omap - id: "MAR06546" - - name: "" + - name: "ATP:1-Phosphatidyl-1D-myo-inositol 4-phosphotransferase" - metabolites: !!omap - MAM00553c: 1 - MAM01285c: 1 @@ -151454,7 +151478,7 @@ - confidence_score: 0 - !!omap - id: "MAR06547" - - name: "" + - name: "ATP:1-Phosphatidyl-1D-myo-inositol 4-phosphotransferase" - metabolites: !!omap - MAM00553c: -1 - MAM02040c: -1 @@ -151472,7 +151496,7 @@ - confidence_score: 0 - !!omap - id: "MAR06548" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase" - metabolites: !!omap - MAM00551c: 1 - MAM00553c: -1 @@ -151491,7 +151515,7 @@ - confidence_score: 0 - !!omap - id: "MAR06549" - - name: "" + - name: "1-phosphatidyl-1D-myo-inositol-3,4-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00551c: -1 - MAM00552c: 1 @@ -151509,7 +151533,7 @@ - confidence_score: 0 - !!omap - id: "MAR06550" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM00551c: -1 - MAM00553c: 1 @@ -151527,7 +151551,7 @@ - confidence_score: 0 - !!omap - id: "MAR06551" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 5-phosphotransferase" - metabolites: !!omap - MAM00553c: -1 - MAM01285c: 1 @@ -151546,7 +151570,7 @@ - confidence_score: 0 - !!omap - id: "MAR06552" - - name: "" + - name: "Phosphatidyl-myo-inositol-4,5-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00553c: 1 - MAM02040c: -1 @@ -151564,7 +151588,7 @@ - confidence_score: 0 - !!omap - id: "MAR06553" - - name: "" + - name: "1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00554c: 1 - MAM02040c: -1 @@ -151582,7 +151606,7 @@ - confidence_score: 0 - !!omap - id: "MAR06554" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-5-phosphate 4-phosphotransferase" - metabolites: !!omap - MAM00554c: -1 - MAM01285c: 1 @@ -151601,7 +151625,7 @@ - confidence_score: 0 - !!omap - id: "MAR06555" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -151620,7 +151644,7 @@ - confidence_score: 0 - !!omap - id: "MAR06556" - - name: "" + - name: "Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02734c: -1 @@ -151638,7 +151662,7 @@ - confidence_score: 0 - !!omap - id: "MAR06557" - - name: "" + - name: "1-phosphatidyl-1D-myo-inositol-3,4,5-trisphosphate 5-phosphohydrolase" - metabolites: !!omap - MAM00551c: 1 - MAM02040c: -1 @@ -151674,7 +151698,7 @@ - confidence_score: 0 - !!omap - id: "MAR06559" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase" - metabolites: !!omap - MAM00237c: 1 - MAM01718c: 1 @@ -151693,7 +151717,7 @@ - confidence_score: 0 - !!omap - id: "MAR06560" - - name: "" + - name: "D-myo-Inositol-1,4,5-trisphosphate 5-phosphohydrolase" - metabolites: !!omap - MAM00526c: 1 - MAM01718c: -1 @@ -151711,7 +151735,7 @@ - confidence_score: 0 - !!omap - id: "MAR06561" - - name: "" + - name: "D-myo-Inositol-1,4-bisphosphate 1-phosphohydrolase" - metabolites: !!omap - MAM00526c: -1 - MAM00530c: 1 @@ -151729,7 +151753,7 @@ - confidence_score: 0 - !!omap - id: "MAR06562" - - name: "" + - name: "1D-myo-inositol 4-phosphate phosphohydrolase" - metabolites: !!omap - MAM00530c: -1 - MAM02040c: -1 @@ -151747,7 +151771,7 @@ - confidence_score: 0 - !!omap - id: "MAR06563" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5-trisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM00522c: 1 - MAM01285c: 1 @@ -151766,7 +151790,7 @@ - confidence_score: 0 - !!omap - id: "MAR06564" - - name: "" + - name: "D-myo-Inositol 1,3,4,5-tetrakisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM00522c: -1 - MAM01718c: 1 @@ -151784,7 +151808,7 @@ - confidence_score: 0 - !!omap - id: "MAR06565" - - name: "" + - name: "D-myo-Inositol 1,3,4,5-tetrakisphosphate 5-phosphohydrolase" - metabolites: !!omap - MAM00522c: -1 - MAM00524c: 1 @@ -151802,7 +151826,7 @@ - confidence_score: 0 - !!omap - id: "MAR06566" - - name: "" + - name: "ATP:1D-myo-inositol-1,3,4-trisphosphate 5-phosphotransferase" - metabolites: !!omap - MAM00522c: 1 - MAM00524c: -1 @@ -151821,7 +151845,7 @@ - confidence_score: 0 - !!omap - id: "MAR06567" - - name: "" + - name: "ATP:1D-myo-inositol-1,3,4-trisphosphate 6-phosphotransferase" - metabolites: !!omap - MAM00523c: 1 - MAM00524c: -1 @@ -151840,7 +151864,7 @@ - confidence_score: 0 - !!omap - id: "MAR06568" - - name: "" + - name: "ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase" - metabolites: !!omap - MAM00521c: 1 - MAM00523c: -1 @@ -151859,7 +151883,7 @@ - confidence_score: 0 - !!omap - id: "MAR06569" - - name: "" + - name: "D-myo-Inositol 1,3,4-trisphosphate 1-phosphohydrolase" - metabolites: !!omap - MAM00524c: -1 - MAM00528c: 1 @@ -151877,7 +151901,7 @@ - confidence_score: 0 - !!omap - id: "MAR06570" - - name: "" + - name: "D-myo-Inositol-3,4-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00528c: -1 - MAM00529c: 1 @@ -151895,7 +151919,7 @@ - confidence_score: 0 - !!omap - id: "MAR06571" - - name: "" + - name: "1D-myo-inositol 3-phosphate phosphohydrolase" - metabolites: !!omap - MAM00529c: -1 - MAM02040c: -1 @@ -151913,7 +151937,7 @@ - confidence_score: 0 - !!omap - id: "MAR06572" - - name: "" + - name: "1D-myo-inositol-3-phosphate lyase (isomerizing)" - metabolites: !!omap - MAM00529c: 1 - MAM01968c: -1 @@ -151929,7 +151953,7 @@ - confidence_score: 0 - !!omap - id: "MAR06573" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5-trisphosphate 6-phosphotransferase" - metabolites: !!omap - MAM00525c: 1 - MAM01285c: 1 @@ -151948,7 +151972,7 @@ - confidence_score: 0 - !!omap - id: "MAR06574" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5,6-tetrakisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM00521c: 1 - MAM00525c: -1 @@ -151967,7 +151991,7 @@ - confidence_score: 0 - !!omap - id: "MAR06575" - - name: "" + - name: "ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase" - metabolites: !!omap - MAM00521c: -1 - MAM00527c: 1 @@ -151986,7 +152010,7 @@ - confidence_score: 0 - !!omap - id: "MAR06576" - - name: "" + - name: "ATP:1D-myo-inositol 1,3,4,5,6-pentakisphosphate 2-phosphotransferase" - metabolites: !!omap - MAM00521c: -1 - MAM01285c: 1 @@ -152229,7 +152253,7 @@ - confidence_score: 0 - !!omap - id: "MAR07652" - - name: "" + - name: "ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase" - metabolites: !!omap - MAM01133c: 1 - MAM01285c: 1 @@ -152247,7 +152271,7 @@ - confidence_score: 0 - !!omap - id: "MAR07654" - - name: "" + - name: "5-Diphosphoinositol pentakisphosphate diphosphohydrolase" - metabolites: !!omap - MAM01133n: -1 - MAM02039n: 1 @@ -152266,7 +152290,7 @@ - confidence_score: 0 - !!omap - id: "MAR07655" - - name: "" + - name: "5-Diphosphoinositol pentakisphosphate diphosphohydrolase" - metabolites: !!omap - MAM01133c: -1 - MAM02039c: 1 @@ -152285,7 +152309,7 @@ - confidence_score: 0 - !!omap - id: "MAR07656" - - name: "" + - name: "ATP:1D-myo-inositol-5-diphosphate-pentakisphosphate phosphotransferase" - metabolites: !!omap - MAM00531c: 1 - MAM01133c: -1 @@ -152322,7 +152346,7 @@ - confidence_score: 0 - !!omap - id: "MAR08800" - - name: "" + - name: "ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase" - metabolites: !!omap - MAM00521n: 1 - MAM00523n: -1 @@ -152359,7 +152383,7 @@ - confidence_score: 0 - !!omap - id: "MAR08802" - - name: "" + - name: "D-myo-Inositol-1,3-bisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02172c: -1 @@ -152377,7 +152401,7 @@ - confidence_score: 0 - !!omap - id: "MAR08803" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5,6-tetrakisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM00521n: 1 - MAM00525n: -1 @@ -152396,7 +152420,7 @@ - confidence_score: 0 - !!omap - id: "MAR08804" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5-trisphosphate 6-phosphotransferase" - metabolites: !!omap - MAM00525n: 1 - MAM01285n: 1 @@ -152415,7 +152439,7 @@ - confidence_score: 0 - !!omap - id: "MAR08805" - - name: "" + - name: "ATP:1D-myo-inositol-1,4,5-trisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM00522n: 1 - MAM01285n: 1 @@ -152452,7 +152476,7 @@ - confidence_score: 0 - !!omap - id: "MAR08807" - - name: "" + - name: "Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM02040n: -1 - MAM02734n: -1 @@ -152470,7 +152494,7 @@ - confidence_score: 0 - !!omap - id: "MAR08808" - - name: "" + - name: "1-phosphatidyl-1D-myo-inositol-3,4,5-trisphosphate 5-phosphohydrolase" - metabolites: !!omap - MAM00551n: 1 - MAM02040n: -1 @@ -152488,7 +152512,7 @@ - confidence_score: 0 - !!omap - id: "MAR08809" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate 3-phosphohydrolase" - metabolites: !!omap - MAM00551n: -1 - MAM00553n: 1 @@ -152506,7 +152530,7 @@ - confidence_score: 0 - !!omap - id: "MAR08810" - - name: "" + - name: "1-phosphatidyl-1D-myo-inositol-3,4-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00551n: -1 - MAM00552n: 1 @@ -152543,7 +152567,7 @@ - confidence_score: 0 - !!omap - id: "MAR08812" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol 3-phosphate 3-phosphohydrolase" - metabolites: !!omap - MAM00552n: -1 - MAM02040n: -1 @@ -152618,7 +152642,7 @@ - confidence_score: 0 - !!omap - id: "MAR08816" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate 3-phosphotransferase" - metabolites: !!omap - MAM01285n: 1 - MAM01371n: -1 @@ -152637,7 +152661,7 @@ - confidence_score: 0 - !!omap - id: "MAR08817" - - name: "" + - name: "Phosphatidyl-myo-inositol-4,5-bisphosphate 4-phosphohydrolase" - metabolites: !!omap - MAM00553n: 1 - MAM02040n: -1 @@ -152655,7 +152679,7 @@ - confidence_score: 0 - !!omap - id: "MAR08818" - - name: "" + - name: "1-Phosphatidyl-1D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase" - metabolites: !!omap - MAM00237n: 1 - MAM01718n: 1 @@ -152674,7 +152698,7 @@ - confidence_score: 0 - !!omap - id: "MAR08819" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase" - metabolites: !!omap - MAM00551n: 1 - MAM00553n: -1 @@ -152693,7 +152717,7 @@ - confidence_score: 0 - !!omap - id: "MAR08820" - - name: "" + - name: "ATP:1-Phosphatidyl-1D-myo-inositol 4-phosphotransferase" - metabolites: !!omap - MAM00553n: -1 - MAM02040n: -1 @@ -152711,7 +152735,7 @@ - confidence_score: 0 - !!omap - id: "MAR08821" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 5-phosphotransferase" - metabolites: !!omap - MAM00553n: -1 - MAM01285n: 1 @@ -152806,7 +152830,7 @@ - confidence_score: 0 - !!omap - id: "MAR08826" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol-5-phosphate 4-phosphotransferase" - metabolites: !!omap - MAM00554n: -1 - MAM01285n: 1 @@ -152825,7 +152849,7 @@ - confidence_score: 0 - !!omap - id: "MAR08827" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol 3-phosphotransferase" - metabolites: !!omap - MAM00552r: 1 - MAM01285r: 1 @@ -152844,7 +152868,7 @@ - confidence_score: 0 - !!omap - id: "MAR08829" - - name: "" + - name: "ATP:1-phosphatidyl-1D-myo-inositol 3-phosphotransferase" - metabolites: !!omap - MAM00552n: 1 - MAM01285n: 1 @@ -152863,7 +152887,7 @@ - confidence_score: 0 - !!omap - id: "MAR08830" - - name: "" + - name: "ATP:1-Phosphatidyl-1D-myo-inositol 4-phosphotransferase" - metabolites: !!omap - MAM00553n: 1 - MAM01285n: 1 @@ -152960,7 +152984,7 @@ - confidence_score: 0 - !!omap - id: "MAR03923" - - name: "" + - name: "glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding)" - metabolites: !!omap - MAM01045m: 1 - MAM01596m: 1 @@ -152982,7 +153006,7 @@ - confidence_score: 0 - !!omap - id: "MAR03925" - - name: "" + - name: "5,6,7,8-tetrahydrobiopterin:NAD+ oxidoreductase" - metabolites: !!omap - MAM01698c: -1 - MAM02039c: -1 @@ -153001,7 +153025,7 @@ - confidence_score: 0 - !!omap - id: "MAR03929" - - name: "" + - name: "5-Formiminotetrahydrofolate ammonia-lyase (cyclizing)" - metabolites: !!omap - MAM01044c: -1 - MAM01099c: 1 @@ -153037,7 +153061,7 @@ - confidence_score: 0 - !!omap - id: "MAR04332" - - name: "" + - name: "5,6,7,8-tetrahydrofolate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01700c: -1 - MAM02039c: -1 @@ -153056,7 +153080,7 @@ - confidence_score: 0 - !!omap - id: "MAR04333" - - name: "" + - name: "5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01700c: -1 - MAM02039c: -1 @@ -153075,7 +153099,7 @@ - confidence_score: 0 - !!omap - id: "MAR04335" - - name: "" + - name: "5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01700m: -1 - MAM02039m: -1 @@ -153094,7 +153118,7 @@ - confidence_score: 0 - !!omap - id: "MAR04336" - - name: "" + - name: "10-formyltetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM00266c: -1 - MAM01596c: 1 @@ -153115,7 +153139,7 @@ - confidence_score: 0 - !!omap - id: "MAR04338" - - name: "" + - name: "Formate:tetrahydrofolate ligase (ADP-forming)" - metabolites: !!omap - MAM00266c: 1 - MAM01285c: 1 @@ -153135,7 +153159,7 @@ - confidence_score: 0 - !!omap - id: "MAR04340" - - name: "" + - name: "Formate:tetrahydrofolate ligase (ADP-forming)" - metabolites: !!omap - MAM00266m: 1 - MAM01285m: 1 @@ -153155,7 +153179,7 @@ - confidence_score: 0 - !!omap - id: "MAR04440" - - name: "" + - name: "5,10-methylenetetrahydrofolate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01044m: -1 - MAM01045m: 1 @@ -153173,7 +153197,7 @@ - confidence_score: 2 - !!omap - id: "MAR04442" - - name: "" + - name: "5,10-methylenetetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01044c: -1 - MAM01045c: 1 @@ -153191,7 +153215,7 @@ - confidence_score: 0 - !!omap - id: "MAR04444" - - name: "" + - name: "5,10-methylenetetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01044m: -1 - MAM01045m: 1 @@ -153209,7 +153233,7 @@ - confidence_score: 0 - !!omap - id: "MAR04446" - - name: "" + - name: "5-methyltetrahydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01045c: -1 - MAM01115c: 1 @@ -153228,7 +153252,7 @@ - confidence_score: 0 - !!omap - id: "MAR04448" - - name: "" + - name: "5-methyltetrahydrofolate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01045c: -1 - MAM01115c: 1 @@ -153247,7 +153271,7 @@ - confidence_score: 0 - !!omap - id: "MAR04503" - - name: "" + - name: "5,10-Methenyltetrahydrofolate 5-hydrolase (decyclizing)" - metabolites: !!omap - MAM00266c: -1 - MAM01044c: 1 @@ -153265,7 +153289,7 @@ - confidence_score: 0 - !!omap - id: "MAR04505" - - name: "" + - name: "5,10-Methenyltetrahydrofolate 5-hydrolase (decyclizing)" - metabolites: !!omap - MAM00266m: -1 - MAM01044m: 1 @@ -153283,7 +153307,7 @@ - confidence_score: 0 - !!omap - id: "MAR04654" - - name: "" + - name: "dihydrofolate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01700c: 1 - MAM01830c: -1 @@ -153301,7 +153325,7 @@ - confidence_score: 0 - !!omap - id: "MAR04655" - - name: "" + - name: "dihydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01700c: 1 - MAM01830c: -1 @@ -153319,7 +153343,7 @@ - confidence_score: 0 - !!omap - id: "MAR04656" - - name: "" + - name: "dihydrofolate:NADP+ oxidoreductase" - metabolites: !!omap - MAM01700m: 1 - MAM01830m: -1 @@ -153337,7 +153361,7 @@ - confidence_score: 0 - !!omap - id: "MAR04665" - - name: "" + - name: "S-Aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming)" - metabolites: !!omap - MAM01044m: -1 - MAM01100m: 1 @@ -153355,7 +153379,7 @@ - confidence_score: 0 - !!omap - id: "MAR09726" - - name: "" + - name: "5-Formyltetrahydrofolate:L-glutamate N-formiminotransferase" - metabolites: !!omap - MAM01100c: -1 - MAM01974c: -1 @@ -153374,7 +153398,7 @@ - confidence_score: 0 - !!omap - id: "MAR04666" - - name: "" + - name: "5-Formyltetrahydrofolate cyclo-ligase (ADP-forming)" - metabolites: !!omap - MAM01044m: 1 - MAM01100m: -1 @@ -153393,7 +153417,7 @@ - confidence_score: 0 - !!omap - id: "MAR07145" - - name: "" + - name: "GTP 3',8-cyclase [(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate-forming]" - metabolites: !!omap - MAM01618c: 1 - MAM02034c: -1 @@ -153411,7 +153435,7 @@ - confidence_score: 0 - !!omap - id: "MAR07146" - - name: "" + - name: "thiocarboxylated molybdopterin synthase:cyclic pyranopterin phosphate sulfurtransferase" - metabolites: !!omap - MAM01618c: -1 - MAM02039c: -7 @@ -153433,7 +153457,7 @@ - confidence_score: 0 - !!omap - id: "MAR07147" - - name: "" + - name: "ATP:molybdopterin adenylyltransferase" - metabolites: !!omap - MAM01281c: 1 - MAM01371c: -1 @@ -153452,7 +153476,7 @@ - confidence_score: 0 - !!omap - id: "MAR07908" - - name: "" + - name: "10-Formyltetrahydrofolate:L-glutamate ligase (ADP-forming)" - metabolites: !!omap - MAM00266c: -1 - MAM00267c: 1 @@ -153473,7 +153497,7 @@ - confidence_score: 0 - !!omap - id: "MAR07909" - - name: "" + - name: "10-Formyltetrahydrofolate:L-glutamate ligase (ADP-forming)" - metabolites: !!omap - MAM00266m: -1 - MAM00267m: 1 @@ -153974,7 +153998,7 @@ - confidence_score: 0 - !!omap - id: "MAR08132" - - name: "" + - name: "tetrahydropteroyl-poly-gamma-glutamate gamma-glutamylhydrolase" - metabolites: !!omap - MAM01974e: 4 - MAM02040e: -4 @@ -153992,7 +154016,7 @@ - confidence_score: 0 - !!omap - id: "MAR08133" - - name: "" + - name: "tetrahydropteroyl-poly-gamma-glutamate gamma-glutamylhydrolase" - metabolites: !!omap - MAM01974l: 4 - MAM02040l: -4 @@ -154154,7 +154178,7 @@ - confidence_score: 0 - !!omap - id: "MAR08143" - - name: "" + - name: "5-Formyltetrahydrofolate cyclo-ligase (ADP-forming)" - metabolites: !!omap - MAM01044c: 1 - MAM01100c: -1 @@ -154173,7 +154197,7 @@ - confidence_score: 0 - !!omap - id: "MAR08144" - - name: "" + - name: "5,10-methylenetetrahydrofolate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01044c: -1 - MAM01045c: 1 @@ -154191,7 +154215,7 @@ - confidence_score: 0 - !!omap - id: "MAR08758" - - name: "" + - name: "formate:NAD+ oxidoreductase" - metabolites: !!omap - MAM01596c: 1 - MAM01833c: -1 @@ -154209,7 +154233,7 @@ - confidence_score: 0 - !!omap - id: "MAR07661" - - name: "" + - name: "N6-D-Biotinyl-L-lysine amidohydrolase" - metabolites: !!omap - MAM01400c: -1 - MAM01401c: 1 @@ -154227,7 +154251,7 @@ - confidence_score: 0 - !!omap - id: "MAR07662" - - name: "" + - name: "N6-D-Biotinyl-L-lysine amidohydrolase" - metabolites: !!omap - MAM01400n: -1 - MAM01401n: 1 @@ -154245,7 +154269,7 @@ - confidence_score: 0 - !!omap - id: "MAR07663" - - name: "" + - name: "N6-D-Biotinyl-L-lysine amidohydrolase" - metabolites: !!omap - MAM01400e: -1 - MAM01401e: 1 @@ -154263,7 +154287,7 @@ - confidence_score: 0 - !!omap - id: "MAR07668" - - name: "" + - name: "biotin:CoA ligase (AMP-forming)" - metabolites: !!omap - MAM01371c: -1 - MAM01401c: -1 @@ -154301,7 +154325,7 @@ - confidence_score: 0 - !!omap - id: "MAR07670" - - name: "" + - name: "Biotinyl-5'-AMP:apo-[carboxylase] ligase (AMP-forming)" - metabolites: !!omap - MAM01334c: 1 - MAM01356c: -1 @@ -154338,7 +154362,7 @@ - confidence_score: 0 - !!omap - id: "MAR07672" - - name: "" + - name: "biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: 1 - MAM01357c: -1 @@ -154359,7 +154383,7 @@ - confidence_score: 0 - !!omap - id: "MAR07673" - - name: "" + - name: "carboxybiotin-carboxyl-carrier-protein:acetyl-CoA carboxytransferase" - metabolites: !!omap - MAM01261c: -1 - MAM01357c: 1 @@ -154377,7 +154401,7 @@ - confidence_score: 0 - !!omap - id: "MAR04160" - - name: "" + - name: "GTP 7,8-8,9-dihydrolase" - metabolites: !!omap - MAM01155c: 1 - MAM01833c: 1 @@ -154396,7 +154420,7 @@ - confidence_score: 0 - !!omap - id: "MAR04162" - - name: "" + - name: "GTP 7,8-8,9-dihydrolase" - metabolites: !!omap - MAM01155n: 1 - MAM01833n: 1 @@ -154415,7 +154439,7 @@ - confidence_score: 0 - !!omap - id: "MAR04163" - - name: "" + - name: "2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl) dihydropteridine triphosphate lyase" - metabolites: !!omap - MAM01155c: -1 - MAM01170c: 1 @@ -154432,7 +154456,7 @@ - confidence_score: 0 - !!omap - id: "MAR04165" - - name: "" + - name: "tetrahydrobiopterin:NADP+ oxidoreductase (6-pyruvoyltetrahydropterin-forming)" - metabolites: !!omap - MAM01170c: -1 - MAM02039c: -2 @@ -154451,7 +154475,7 @@ - confidence_score: 0 - !!omap - id: "MAR04166" - - name: "" + - name: "6-Lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase" - metabolites: !!omap - MAM01164c: 1 - MAM01170c: -1 @@ -154470,7 +154494,7 @@ - confidence_score: 0 - !!omap - id: "MAR04167" - - name: "" + - name: "tetrahydrobiopterin:NADP+ oxidoreductase" - metabolites: !!omap - MAM01164c: -1 - MAM02039c: -1 @@ -154489,7 +154513,7 @@ - confidence_score: 0 - !!omap - id: "MAR04169" - - name: "" + - name: "GTP 8,9-hydrolase" - metabolites: !!omap - MAM01832c: 1 - MAM02034c: -1 @@ -154506,7 +154530,7 @@ - confidence_score: 0 - !!omap - id: "MAR04170" - - name: "" + - name: "GTP 8,9-hydrolase" - metabolites: !!omap - MAM01832n: 1 - MAM02034n: -1 @@ -154523,7 +154547,7 @@ - confidence_score: 0 - !!omap - id: "MAR04523" - - name: "" + - name: "5,6,7,8-tetrahydrobiopterin:NADP+ oxidoreductase" - metabolites: !!omap - MAM01698c: -1 - MAM02039c: -1 @@ -154608,7 +154632,7 @@ - confidence_score: 0 - !!omap - id: "MAR04543" - - name: "" + - name: "4a-hydroxytetrahydrobiopterin hydro-lyase" - metabolites: !!omap - MAM00965c: -1 - MAM02040c: 1 @@ -154625,7 +154649,7 @@ - confidence_score: 0 - !!omap - id: "MAR04544" - - name: "" + - name: "4a-hydroxytetrahydrobiopterin hydro-lyase" - metabolites: !!omap - MAM00965n: -1 - MAM02040n: 1 @@ -154642,7 +154666,7 @@ - confidence_score: 0 - !!omap - id: "MAR04816" - - name: "" + - name: "7,8-dihydroneopterin-3'-triphosphate phosphohydrolase (alkaline optimum)" - metabolites: !!omap - MAM01155c: -1 - MAM01704c: 1 @@ -154661,7 +154685,7 @@ - confidence_score: 0 - !!omap - id: "MAR04817" - - name: "" + - name: "2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl) dihydropteridine triphosphate hydrolase" - metabolites: !!omap - MAM00574c: -1 - MAM01155c: 1 @@ -154678,7 +154702,7 @@ - confidence_score: 0 - !!omap - id: "MAR04818" - - name: "" + - name: "2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl) dihydropteridine triphosphate hydrolase" - metabolites: !!omap - MAM00574n: -1 - MAM01155n: 1 @@ -154695,7 +154719,7 @@ - confidence_score: 0 - !!omap - id: "MAR04833" - - name: "" + - name: "formamidopyrimidine nucleoside triphosphate amidohydrolase" - metabolites: !!omap - MAM00575c: -1 - MAM01832c: 1 @@ -154714,7 +154738,7 @@ - confidence_score: 0 - !!omap - id: "MAR04834" - - name: "" + - name: "formamidopyrimidine nucleoside triphosphate amidohydrolase" - metabolites: !!omap - MAM00575n: -1 - MAM01832n: 1 @@ -154733,7 +154757,7 @@ - confidence_score: 0 - !!omap - id: "MAR04835" - - name: "" + - name: "2,5-diaminopyrimidine nucleoside triphosphate mutase" - metabolites: !!omap - MAM00574c: -1 - MAM00575c: 1 @@ -154749,7 +154773,7 @@ - confidence_score: 0 - !!omap - id: "MAR04836" - - name: "" + - name: "2,5-diaminopyrimidine nucleoside triphosphate mutase" - metabolites: !!omap - MAM00574n: -1 - MAM00575n: 1 @@ -154765,7 +154789,7 @@ - confidence_score: 0 - !!omap - id: "MAR08538" - - name: "" + - name: "4a-hydroxytetrahydrobiopterin hydro-lyase" - metabolites: !!omap - MAM00965c: -1 - MAM01698c: 1 @@ -154782,7 +154806,7 @@ - confidence_score: 0 - !!omap - id: "MAR08738" - - name: "" + - name: "2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl) dihydropteridine triphosphate lyase" - metabolites: !!omap - MAM01155n: -1 - MAM01170n: 1 @@ -154799,7 +154823,7 @@ - confidence_score: 0 - !!omap - id: "MAR08739" - - name: "" + - name: "tetrahydrobiopterin:NADP+ oxidoreductase (6-pyruvoyltetrahydropterin-forming)" - metabolites: !!omap - MAM01170n: -1 - MAM02039n: -2 @@ -154928,7 +154952,7 @@ - confidence_score: 0 - !!omap - id: "MAR08346" - - name: "" + - name: "L-Gulono-1,4-lactone lactonohydrolase" - metabolites: !!omap - MAM02039r: 1 - MAM02040r: -1 @@ -154965,7 +154989,7 @@ - confidence_score: 0 - !!omap - id: "MAR08349" - - name: "" + - name: "D-Glucuronolactone:NAD+ oxidoreductase" - metabolites: !!omap - MAM01681c: 1 - MAM01685c: -1 @@ -155004,7 +155028,7 @@ - confidence_score: 0 - !!omap - id: "MAR08620" - - name: "" + - name: "glutathione:dehydroascorbate oxidoreductase" - metabolites: !!omap - MAM01368c: 1 - MAM01655c: -1 @@ -155022,7 +155046,7 @@ - confidence_score: 0 - !!omap - id: "MAR08621" - - name: "" + - name: "L-Dehydroascorbate lactonohydrolase" - metabolites: !!omap - MAM00573c: 1 - MAM01655c: -1 @@ -155113,7 +155137,7 @@ - confidence_score: 0 - !!omap - id: "MAR03991" - - name: "" + - name: "Fe(II):oxygen oxidoreductase" - metabolites: !!omap - MAM01821e: -4 - MAM01822e: 4 @@ -155150,7 +155174,7 @@ - confidence_score: 0 - !!omap - id: "MAR04744" - - name: "" + - name: "5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing" - metabolites: !!omap - MAM01074c: -2 - MAM02039c: 1 @@ -155168,7 +155192,7 @@ - confidence_score: 0 - !!omap - id: "MAR04746" - - name: "" + - name: "porphobilinogen:(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)" - metabolites: !!omap - MAM02039c: 4 - MAM02040c: -1 @@ -155187,7 +155211,7 @@ - confidence_score: 0 - !!omap - id: "MAR04748" - - name: "" + - name: "Hydroxymethylbilane hydro-lyase(cyclizing)" - metabolites: !!omap - MAM02040c: 1 - MAM02151c: -1 @@ -155204,7 +155228,7 @@ - confidence_score: 0 - !!omap - id: "MAR04750" - - name: "" + - name: "Uroporphyrinogen-III carboxy-lyase" - metabolites: !!omap - MAM01596c: 4 - MAM01606c: 1 @@ -155222,7 +155246,7 @@ - confidence_score: 0 - !!omap - id: "MAR04752" - - name: "" + - name: "Coproporphyrinogen:oxygen oxidoreductase(decarboxylating)" - metabolites: !!omap - MAM01596c: 2 - MAM01606c: -1 @@ -155242,7 +155266,7 @@ - confidence_score: 0 - !!omap - id: "MAR04755" - - name: "" + - name: "protoporphyrinogen-IX:oxygen oxidoreductase" - metabolites: !!omap - MAM02041m: 3 - MAM02630m: -3 @@ -155260,7 +155284,7 @@ - confidence_score: 0 - !!omap - id: "MAR04757" - - name: "" + - name: "protoporphyrinogen-IX:oxygen oxidoreductase" - metabolites: !!omap - MAM02041c: 3 - MAM02630c: -3 @@ -155278,7 +155302,7 @@ - confidence_score: 0 - !!omap - id: "MAR04762" - - name: "" + - name: "Cytochrome c apocytochrome-c-lyase" - metabolites: !!omap - MAM01358m: -1 - MAM01631m: 1 @@ -155319,7 +155343,7 @@ - confidence_score: 0 - !!omap - id: "MAR04764" - - name: "" + - name: "Bilirubin:NAD+ oxidoreductase" - metabolites: !!omap - MAM01396c: 1 - MAM01399c: -1 @@ -155406,7 +155430,7 @@ - confidence_score: 0 - !!omap - id: "MAR04772" - - name: "" + - name: "Uroporphyrinogen I carboxy-lyase" - metabolites: !!omap - MAM01596c: 4 - MAM01605c: 1 @@ -155460,7 +155484,7 @@ - confidence_score: 0 - !!omap - id: "MAR08634" - - name: "" + - name: "Bilirubin:NADP+ oxidoreductase" - metabolites: !!omap - MAM01396c: 1 - MAM01399c: -1 @@ -155496,7 +155520,7 @@ - confidence_score: 0 - !!omap - id: "MAR06630" - - name: "" + - name: "retinol: NADP+ oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02554c: -1 @@ -155515,7 +155539,7 @@ - confidence_score: 0 - !!omap - id: "MAR06631" - - name: "" + - name: "retinol:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 1 - MAM02552c: -1 @@ -155534,7 +155558,7 @@ - confidence_score: 0 - !!omap - id: "MAR06632" - - name: "" + - name: "retinol: NADP+ oxidoreductase" - metabolites: !!omap - MAM02039r: 1 - MAM02554r: -1 @@ -155553,7 +155577,7 @@ - confidence_score: 0 - !!omap - id: "MAR06633" - - name: "" + - name: "retinol:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039r: 1 - MAM02552r: -1 @@ -155593,7 +155617,7 @@ - confidence_score: 0 - !!omap - id: "MAR06635" - - name: "" + - name: "phosphatidylcholine:retinol O-acyltransferase" - metabolites: !!omap - MAM00535c: 1 - MAM02684c: -1 @@ -155630,7 +155654,7 @@ - confidence_score: 0 - !!omap - id: "MAR06637" - - name: "" + - name: "all-trans-retinyl ester acylhydrolase, 11-cis-retinol forming" - metabolites: !!omap - MAM00291c: 1 - MAM02039c: 1 @@ -155649,7 +155673,7 @@ - confidence_score: 0 - !!omap - id: "MAR06638" - - name: "" + - name: "11-cis-retinol:NAD+ oxidoreductase" - metabolites: !!omap - MAM00290c: -1 - MAM00291c: 1 @@ -155668,7 +155692,7 @@ - confidence_score: 0 - !!omap - id: "MAR06639" - - name: "" + - name: "phosphatidylcholine:retinol O-acyltransferase" - metabolites: !!omap - MAM00291c: -1 - MAM00535c: 1 @@ -155761,7 +155785,7 @@ - confidence_score: 0 - !!omap - id: "MAR06644" - - name: "" + - name: "9-cis-retinol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01230c: -1 - MAM01232c: 1 @@ -155796,7 +155820,7 @@ - confidence_score: 0 - !!omap - id: "MAR06646" - - name: "" + - name: "retinal:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -155816,7 +155840,7 @@ - confidence_score: 0 - !!omap - id: "MAR06647" - - name: "" + - name: "retinal:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039r: 2 - MAM02040r: -1 @@ -155894,7 +155918,7 @@ - confidence_score: 0 - !!omap - id: "MAR06651" - - name: "" + - name: "all-trans-Retinal 11-cis-trans-isomerase" - metabolites: !!omap - MAM00290c: 1 - MAM02832c: -1 @@ -156269,7 +156293,7 @@ - confidence_score: 0 - !!omap - id: "MAR06671" - - name: "" + - name: "Palmitoyl-CoA:retinol O-acyltransferase" - metabolites: !!omap - MAM00291c: -1 - MAM00292c: 1 @@ -156859,7 +156883,7 @@ - confidence_score: 0 - !!omap - id: "MAR08697" - - name: "" + - name: "beta-carotene:oxygen 15,15'-oxidoreductase (bond-cleaving)" - metabolites: !!omap - MAM01385c: -1 - MAM02630c: -1 @@ -157003,7 +157027,7 @@ - confidence_score: 0 - !!omap - id: "MAR08709" - - name: "" + - name: "11-cis-retinol: NADP+ oxidoreductase" - metabolites: !!omap - MAM00290c: -1 - MAM00291c: 1 @@ -157041,7 +157065,7 @@ - confidence_score: 0 - !!omap - id: "MAR08711" - - name: "" + - name: "all-trans-Retinol 11-cis-trans-isomerase" - metabolites: !!omap - MAM00291c: -1 - MAM02834c: 1 @@ -157113,7 +157137,7 @@ - confidence_score: 0 - !!omap - id: "MAR06506" - - name: "" + - name: "ATP:riboflavin 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -157132,7 +157156,7 @@ - confidence_score: 0 - !!omap - id: "MAR06507" - - name: "" + - name: "riboflavin-5-phosphate phosphohydrolase" - metabolites: !!omap - MAM01828c: -1 - MAM02040c: -1 @@ -157150,7 +157174,7 @@ - confidence_score: 0 - !!omap - id: "MAR06508" - - name: "" + - name: "ATP:FMN adenylyltransferase" - metabolites: !!omap - MAM01371c: -1 - MAM01802c: 1 @@ -157169,7 +157193,7 @@ - confidence_score: 0 - !!omap - id: "MAR06509" - - name: "" + - name: "FAD nucleotidohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM01802c: -1 @@ -157188,7 +157212,7 @@ - confidence_score: 0 - !!omap - id: "MAR06510" - - name: "" + - name: "FADH2:NAD+ oxidoreductase" - metabolites: !!omap - MAM01802c: -1 - MAM01803c: 1 @@ -157207,7 +157231,7 @@ - confidence_score: 0 - !!omap - id: "MAR06511" - - name: "" + - name: "FADH2:NADP+ oxidoreductase" - metabolites: !!omap - MAM01802c: -1 - MAM01803c: 1 @@ -157226,7 +157250,7 @@ - confidence_score: 0 - !!omap - id: "MAR04537" - - name: "" + - name: "L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase(5-hydroxylating)" - metabolites: !!omap - MAM00965c: 1 - MAM01107c: 1 @@ -157245,7 +157269,7 @@ - confidence_score: 0 - !!omap - id: "MAR04545" - - name: "" + - name: "5-Hydroxy-L-tryptophan decarboxy-lyase" - metabolites: !!omap - MAM01107c: -1 - MAM01596c: 1 @@ -157263,7 +157287,7 @@ - confidence_score: 0 - !!omap - id: "MAR04546" - - name: "" + - name: "acetyl-CoA:aralkylamine N-acetyltransferase" - metabolites: !!omap - MAM01261c: -1 - MAM01597c: 1 @@ -157282,7 +157306,7 @@ - confidence_score: 0 - !!omap - id: "MAR04547" - - name: "" + - name: "S-adenosyl-L-homocysteine:N-acetylserotonin O-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02460c: 1 @@ -157301,7 +157325,7 @@ - confidence_score: 0 - !!omap - id: "MAR04548" - - name: "" + - name: "melatonin,NADPH---hemoprotein reductase:oxygen oxidoreductase" - metabolites: !!omap - MAM01161c: -1 - MAM02039c: -1 @@ -157337,7 +157361,7 @@ - confidence_score: 0 - !!omap - id: "MAR04550" - - name: "" + - name: "melatonin:oxygen 2,3-dioxygenase (indole-decyclizing)" - metabolites: !!omap - MAM01839c: 1 - MAM02460c: -1 @@ -157427,7 +157451,7 @@ - confidence_score: 0 - !!omap - id: "MAR04555" - - name: "" + - name: "S-Adenosyl-L-methionine:amine N-methyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM02604c: 1 @@ -157446,7 +157470,7 @@ - confidence_score: 0 - !!omap - id: "MAR04556" - - name: "" + - name: "S-Adenosyl-L-methionine:amine N-methyltransferase" - metabolites: !!omap - MAM01408c: 1 - MAM02039c: 2 @@ -157465,7 +157489,7 @@ - confidence_score: 0 - !!omap - id: "MAR04557" - - name: "" + - name: "5-hydroxytryptamine:oxygen 2,3-dioxygenase (indole-decyclizing)" - metabolites: !!omap - MAM01834c: 1 - MAM02630c: -1 @@ -157482,7 +157506,7 @@ - confidence_score: 0 - !!omap - id: "MAR04558" - - name: "" + - name: "5-Hydroxytryptamine:oxygen oxidoreductase(deaminating)(flavin-containing)" - metabolites: !!omap - MAM01102c: 1 - MAM02039c: 1 @@ -157503,7 +157527,7 @@ - confidence_score: 0 - !!omap - id: "MAR04559" - - name: "" + - name: "5-Hydroxyindoleacetaldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM01102c: -1 - MAM01103c: 1 @@ -157523,7 +157547,7 @@ - confidence_score: 0 - !!omap - id: "MAR04560" - - name: "" + - name: "5-hydroxyindoleacetaldehyde:oxygen oxidoreductase" - metabolites: !!omap - MAM01102c: -1 - MAM01103c: 1 @@ -157581,7 +157605,7 @@ - confidence_score: 0 - !!omap - id: "MAR04564" - - name: "" + - name: "S-Adenosyl-L-methionine:N-acetylserotonin O-methyltransferase" - metabolites: !!omap - MAM01103c: -1 - MAM01112c: 1 @@ -157600,7 +157624,7 @@ - confidence_score: 0 - !!omap - id: "MAR04204" - - name: "" + - name: "ATP:thiamine diphosphotransferase" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: -1 @@ -157619,7 +157643,7 @@ - confidence_score: 0 - !!omap - id: "MAR04206" - - name: "" + - name: "ATP:thiamine-diphosphate phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -157637,7 +157661,7 @@ - confidence_score: 0 - !!omap - id: "MAR04207" - - name: "" + - name: "Thiamin-triphosphate phosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -157656,7 +157680,7 @@ - confidence_score: 0 - !!omap - id: "MAR04208" - - name: "" + - name: "Thiamin diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -157675,7 +157699,7 @@ - confidence_score: 0 - !!omap - id: "MAR08744" - - name: "" + - name: "Thiamin diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039m: 1 - MAM02040m: -1 @@ -157694,7 +157718,7 @@ - confidence_score: 0 - !!omap - id: "MAR08746" - - name: "" + - name: "pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)" - metabolites: !!omap - MAM00561c: 1 - MAM01596c: 1 @@ -157713,7 +157737,7 @@ - confidence_score: 0 - !!omap - id: "MAR08748" - - name: "" + - name: "thiamin monophosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -157751,7 +157775,7 @@ - confidence_score: 0 - !!omap - id: "MAR08615" - - name: "" + - name: "ATP:cob(I)alamin Co-beta-adenosyltransferase" - metabolites: !!omap - MAM01598m: 1 - MAM01599m: -1 @@ -157770,7 +157794,7 @@ - confidence_score: 0 - !!omap - id: "MAR08616" - - name: "" + - name: "ATP:cob(I)alamin Co-beta-adenosyltransferase" - metabolites: !!omap - MAM01371m: -1 - MAM01598m: -1 @@ -157789,7 +157813,7 @@ - confidence_score: 0 - !!omap - id: "MAR04064" - - name: "" + - name: "pyridoxal-5'-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -157807,7 +157831,7 @@ - confidence_score: 0 - !!omap - id: "MAR04065" - - name: "" + - name: "ATP:pyridoxal 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -157826,7 +157850,7 @@ - confidence_score: 0 - !!omap - id: "MAR04066" - - name: "" + - name: "ATP:pyridoxine 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -157845,7 +157869,7 @@ - confidence_score: 0 - !!omap - id: "MAR04067" - - name: "" + - name: "pyridoxine 5'-phosphate:oxygen oxidoreductase" - metabolites: !!omap - MAM02041c: 1 - MAM02630c: -1 @@ -157863,7 +157887,7 @@ - confidence_score: 0 - !!omap - id: "MAR04068" - - name: "" + - name: "ATP:pyridoxal 5'-phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -157882,7 +157906,7 @@ - confidence_score: 0 - !!omap - id: "MAR04069" - - name: "" + - name: "pyridoxamine-5'-phosphate:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -157903,7 +157927,7 @@ - confidence_score: 0 - !!omap - id: "MAR04070" - - name: "" + - name: "pyridoxamine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -157924,7 +157948,7 @@ - confidence_score: 0 - !!omap - id: "MAR04071" - - name: "" + - name: "pyridoxine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM02041c: -1 - MAM02630c: 1 @@ -157942,7 +157966,7 @@ - confidence_score: 0 - !!omap - id: "MAR08102" - - name: "" + - name: "pyridoxal:oxygen 4-oxidoreductase" - metabolites: !!omap - MAM01033c: 1 - MAM02040c: -1 @@ -157961,7 +157985,7 @@ - confidence_score: 0 - !!omap - id: "MAR08724" - - name: "" + - name: "pyridoxamine-5'-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -157979,7 +158003,7 @@ - confidence_score: 0 - !!omap - id: "MAR08725" - - name: "" + - name: "pyridoxine-5'-phosphate phosphohydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02751c: 1 @@ -158013,7 +158037,7 @@ - confidence_score: 0 - !!omap - id: "MAR02115" - - name: "" + - name: "calciol,NADPH-hemoprotein reductase:oxygen oxidoreductase (25-hydroxylating)" - metabolites: !!omap - MAM01415c: 1 - MAM02039c: -1 @@ -158034,7 +158058,7 @@ - confidence_score: 0 - !!omap - id: "MAR02117" - - name: "" + - name: "calciol,NADPH-hemoprotein reductase:oxygen oxidoreductase (25-hydroxylating)" - metabolites: !!omap - MAM01415m: 1 - MAM02039m: -1 @@ -158055,7 +158079,7 @@ - confidence_score: 0 - !!omap - id: "MAR02118" - - name: "" + - name: "calcidiol,adrenodoxin:oxygen oxidoreductase (1-hydroxylating)" - metabolites: !!omap - MAM01415c: -1 - MAM01417c: 1 @@ -158526,7 +158550,7 @@ - confidence_score: 0 - !!omap - id: "MAR08008" - - name: "" + - name: "calcidiol,adrenodoxin:oxygen oxidoreductase (1-hydroxylating)" - metabolites: !!omap - MAM01415m: -1 - MAM01417m: 1 @@ -159650,7 +159674,7 @@ - confidence_score: 0 - !!omap - id: "MAR06992" - - name: "" + - name: "Benzpyrene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01374c: -1 - MAM01379c: 1 @@ -159671,7 +159695,7 @@ - confidence_score: 0 - !!omap - id: "MAR06993" - - name: "" + - name: "Benzpyrene,NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01374c: -1 - MAM01378c: 1 @@ -159692,7 +159716,7 @@ - confidence_score: 0 - !!omap - id: "MAR06994" - - name: "" + - name: "benzpyrene,NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01374c: -1 - MAM01375c: 1 @@ -159713,7 +159737,7 @@ - confidence_score: 0 - !!omap - id: "MAR06995" - - name: "" + - name: "4,5-dihydro-4-hydroxy-5-S-glutathionyl-benzo[a]pyrene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00944c: -1 - MAM01375c: 1 @@ -159731,7 +159755,7 @@ - confidence_score: 0 - !!omap - id: "MAR06996" - - name: "" + - name: "benzo[a]pyrene-7,8-oxide hydrolase" - metabolites: !!omap - MAM01377c: 1 - MAM01378c: -1 @@ -159764,7 +159788,7 @@ - confidence_score: 0 - !!omap - id: "MAR06998" - - name: "" + - name: "7,8-dihydro-7-hydroxy-8-S-glutathionyl-benzo[a]pyrene hydrolase" - metabolites: !!omap - MAM01175c: 1 - MAM01377c: -1 @@ -159783,7 +159807,7 @@ - confidence_score: 0 - !!omap - id: "MAR06999" - - name: "" + - name: "benzo[a]pyrene-7,8-diol, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01376c: 1 - MAM01377c: -1 @@ -159804,7 +159828,7 @@ - confidence_score: 0 - !!omap - id: "MAR07000" - - name: "" + - name: "9-hydroxybenzo[a]pyrene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01241c: -1 - MAM01242c: 1 @@ -159825,7 +159849,7 @@ - confidence_score: 0 - !!omap - id: "MAR07001" - - name: "" + - name: "naphthalene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00032c: 1 - MAM02039c: -1 @@ -159846,7 +159870,7 @@ - confidence_score: 0 - !!omap - id: "MAR07002" - - name: "" + - name: "Naphthalene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00034c: 1 - MAM02039c: -1 @@ -159867,7 +159891,7 @@ - confidence_score: 0 - !!omap - id: "MAR07003" - - name: "" + - name: "(1R)-hydroxy-(2R)-glutathionyl-1,2-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00031c: 1 - MAM00032c: -1 @@ -159885,7 +159909,7 @@ - confidence_score: 0 - !!omap - id: "MAR07004" - - name: "" + - name: "(1R,2S)-naphthalene 1,2-oxide hydrolase" - metabolites: !!omap - MAM00032c: -1 - MAM00243c: 1 @@ -159902,7 +159926,7 @@ - confidence_score: 0 - !!omap - id: "MAR07005" - - name: "" + - name: "1,2-Dihydronaphthalene-1,2-diol dehydrogenase" - metabolites: !!omap - MAM00243c: -1 - MAM02039c: 1 @@ -159938,7 +159962,7 @@ - confidence_score: 0 - !!omap - id: "MAR07007" - - name: "" + - name: "1,2-Dihydronaphthalene-1,2-diol, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00243c: -1 - MAM00244c: 1 @@ -160029,7 +160053,7 @@ - confidence_score: 0 - !!omap - id: "MAR07012" - - name: "" + - name: "beta-Naphthol, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00668c: -1 - MAM02039c: -1 @@ -160050,7 +160074,7 @@ - confidence_score: 0 - !!omap - id: "MAR07013" - - name: "" + - name: "(1S)-hydroxy-(2S)-glutathionyl-1,2-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00033c: 1 - MAM00034c: -1 @@ -160068,7 +160092,7 @@ - confidence_score: 0 - !!omap - id: "MAR07014" - - name: "" + - name: "(1S,2R)-naphthalene 1,2-oxide hydrolase" - metabolites: !!omap - MAM00034c: -1 - MAM00243c: 1 @@ -160222,7 +160246,7 @@ - confidence_score: 0 - !!omap - id: "MAR07022" - - name: "" + - name: "glutathione-S-transferase" - metabolites: !!omap - MAM01298c: -1 - MAM01299c: 1 @@ -160240,7 +160264,7 @@ - confidence_score: 0 - !!omap - id: "MAR07023" - - name: "" + - name: "epoxide hydrolase" - metabolites: !!omap - MAM01295c: 1 - MAM01298c: -1 @@ -160342,7 +160366,7 @@ - confidence_score: 0 - !!omap - id: "MAR07029" - - name: "" + - name: "trichloroethene:glutathione S-(1,2-dichlorovinyl)transferase" - metabolites: !!omap - MAM02026c: -1 - MAM02144c: 1 @@ -160360,7 +160384,7 @@ - confidence_score: 0 - !!omap - id: "MAR07030" - - name: "" + - name: "trichloroethene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 1 @@ -160418,7 +160442,7 @@ - confidence_score: 0 - !!omap - id: "MAR07033" - - name: "" + - name: "trichloroethene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01441c: 1 - MAM02039c: -1 @@ -160456,7 +160480,7 @@ - confidence_score: 0 - !!omap - id: "MAR07035" - - name: "" + - name: "Chloral:NAD(P)+ oxidoreductase" - metabolites: !!omap - MAM01440c: -1 - MAM02039c: 2 @@ -160475,7 +160499,7 @@ - confidence_score: 0 - !!omap - id: "MAR07036" - - name: "" + - name: "trichloroethanol, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM02039c: -1 - MAM02040c: 3 @@ -160515,7 +160539,7 @@ - confidence_score: 0 - !!omap - id: "MAR07038" - - name: "" + - name: "trichloroethanol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01440c: -1 - MAM02039c: -1 @@ -160535,7 +160559,7 @@ - confidence_score: 0 - !!omap - id: "MAR07039" - - name: "" + - name: "UDP-glucuronate beta-D-glucuronosyltransferase" - metabolites: !!omap - MAM02039c: 1 - MAM03042c: 1 @@ -160554,7 +160578,7 @@ - confidence_score: 0 - !!omap - id: "MAR07040" - - name: "" + - name: "bromobenzene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01403c: -1 - MAM01407c: 1 @@ -160575,7 +160599,7 @@ - confidence_score: 0 - !!omap - id: "MAR07041" - - name: "" + - name: "3,4-dihydro-3-hydroxy-4-S-glutathionyl bromobenzene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00724c: 1 - MAM01407c: -1 @@ -160593,7 +160617,7 @@ - confidence_score: 0 - !!omap - id: "MAR07042" - - name: "" + - name: "bromobenzene-3,4-oxide hydrolase" - metabolites: !!omap - MAM01406c: 1 - MAM01407c: -1 @@ -160626,7 +160650,7 @@ - confidence_score: 0 - !!omap - id: "MAR07044" - - name: "" + - name: "4-bromophenol, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00974c: -1 - MAM00975c: 1 @@ -160697,7 +160721,7 @@ - confidence_score: 0 - !!omap - id: "MAR07048" - - name: "" + - name: "bromobenzene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM01403c: -1 - MAM01405c: 1 @@ -160734,7 +160758,7 @@ - confidence_score: 0 - !!omap - id: "MAR07050" - - name: "" + - name: "2,3-dihydro-2-S-glutathionyl-3-hydroxy bromobenzene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00571c: 1 - MAM01405c: -1 @@ -160752,7 +160776,7 @@ - confidence_score: 0 - !!omap - id: "MAR07051" - - name: "" + - name: "bromobenzene-2,3-oxide hydrolase" - metabolites: !!omap - MAM01404c: 1 - MAM01405c: -1 @@ -160832,7 +160856,7 @@ - confidence_score: 0 - !!omap - id: "MAR07055" - - name: "" + - name: "microsomal epoxide hydrolase" - metabolites: !!omap - MAM00435c: -1 - MAM02040c: -1 @@ -160870,7 +160894,7 @@ - confidence_score: 0 - !!omap - id: "MAR07057" - - name: "" + - name: "3'-phosphoadenylyl-sulfate:7-hydroxymethyl-12-methylbenz[a]anthracene sulfotransferase" - metabolites: !!omap - MAM01195c: 1 - MAM01196c: -1 @@ -160888,7 +160912,7 @@ - confidence_score: 0 - !!omap - id: "MAR07058" - - name: "" + - name: "microsomal epoxide hydrolase" - metabolites: !!omap - MAM01173c: -1 - MAM02040c: -1 @@ -160905,7 +160929,7 @@ - confidence_score: 0 - !!omap - id: "MAR07059" - - name: "" + - name: "carbonyl reductase" - metabolites: !!omap - MAM00929c: 1 - MAM00932c: -1 @@ -161271,7 +161295,7 @@ - confidence_score: 0 - !!omap - id: "MAR07078" - - name: "" + - name: "1-nitronaphthalene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00545c: -1 - MAM00546c: 1 @@ -161292,7 +161316,7 @@ - confidence_score: 0 - !!omap - id: "MAR07079" - - name: "" + - name: "1-nitro-5-hydroxy-6-glutathionyl-5,6-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00542c: 1 - MAM00546c: -1 @@ -161310,7 +161334,7 @@ - confidence_score: 0 - !!omap - id: "MAR07080" - - name: "" + - name: "1-nitro-5-glutathionyl-6-hydroxy-5,6-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00541c: 1 - MAM00546c: -1 @@ -161328,7 +161352,7 @@ - confidence_score: 0 - !!omap - id: "MAR07081" - - name: "" + - name: "1-nitronaphthalene-5,6-oxide hydrolase" - metabolites: !!omap - MAM00540c: 1 - MAM00546c: -1 @@ -161345,7 +161369,7 @@ - confidence_score: 0 - !!omap - id: "MAR07082" - - name: "" + - name: "1-nitronaphthalene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00545c: -1 - MAM00547c: 1 @@ -161366,7 +161390,7 @@ - confidence_score: 0 - !!omap - id: "MAR07083" - - name: "" + - name: "1-nitro-7-hydroxy-8-glutathionyl-7,8-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00544c: 1 - MAM00547c: -1 @@ -161384,7 +161408,7 @@ - confidence_score: 0 - !!omap - id: "MAR07084" - - name: "" + - name: "1-nitro-7-glutathionyl-8-hydroxy-7,8-dihydronaphthalene glutathione-lyase (epoxide-forming)" - metabolites: !!omap - MAM00543c: 1 - MAM00547c: -1 @@ -161455,7 +161479,7 @@ - confidence_score: 0 - !!omap - id: "MAR07088" - - name: "" + - name: "1,1-dichloroethylene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00228c: -1 - MAM00568c: 1 @@ -161476,7 +161500,7 @@ - confidence_score: 0 - !!omap - id: "MAR07089" - - name: "" + - name: "S-(2,2-dichloro-1-hydroxy)ethyl-glutathione 2,2-dichloroacetaldehyde-lyase (glutathione-forming)" - metabolites: !!omap - MAM00568c: -1 - MAM02026c: -1 @@ -161511,7 +161535,7 @@ - confidence_score: 0 - !!omap - id: "MAR07091" - - name: "" + - name: "1,1-dichloroethylene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00227c: 1 - MAM00228c: -1 @@ -161532,7 +161556,7 @@ - confidence_score: 0 - !!omap - id: "MAR07092" - - name: "" + - name: "1,1-dichloroethylene-epoxide:glutathione S-(chloroepoxyethyl)transferase [2-(S-glutathionyl)acetyl-chloride-forming]" - metabolites: !!omap - MAM00227c: -1 - MAM00565c: 1 @@ -161550,7 +161574,7 @@ - confidence_score: 0 - !!omap - id: "MAR07093" - - name: "" + - name: "2-(S-glutathionyl)acetyl-chloride:glutathione 2-(S-glutathionyl)acetyltransferase" - metabolites: !!omap - MAM00565c: -1 - MAM00566c: 1 @@ -161605,7 +161629,7 @@ - confidence_score: 0 - !!omap - id: "MAR07096" - - name: "" + - name: "1,1-dichloroethylene, NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00228c: -1 - MAM01444c: 1 @@ -161626,7 +161650,7 @@ - confidence_score: 0 - !!omap - id: "MAR07097" - - name: "" + - name: "chloroacetyl-chloride:glutathione S-chloroacetyltransferase" - metabolites: !!omap - MAM01444c: -1 - MAM02026c: -1 @@ -161663,7 +161687,7 @@ - confidence_score: 0 - !!omap - id: "MAR07099" - - name: "" + - name: "1,2-dibromoethane,NADPH:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)" - metabolites: !!omap - MAM00242c: -1 - MAM00636c: 1 @@ -161684,7 +161708,7 @@ - confidence_score: 0 - !!omap - id: "MAR07100" - - name: "" + - name: "2-bromoacetaldehyde:glutathione S-(formylmethyl)transferase" - metabolites: !!omap - MAM00636c: -1 - MAM02026c: -1 @@ -161703,7 +161727,7 @@ - confidence_score: 0 - !!omap - id: "MAR07103" - - name: "" + - name: "1,2-dibromoethane:glutathione ethylenetransferase (episulfonium-forming)" - metabolites: !!omap - MAM00242c: -1 - MAM01978c: 1 @@ -161859,7 +161883,7 @@ - confidence_score: 0 - !!omap - id: "MAR08038" - - name: "" + - name: "Hexadecanoic acid:fatty acid omega-hydroxylase" - metabolites: !!omap - MAM00403c: 1 - MAM02039c: -1 @@ -162090,7 +162114,7 @@ - confidence_score: 0 - !!omap - id: "MAR06535" - - name: "" + - name: "chloride:hydrogen-peroxide oxidoreductase (hypochlorite-forming)" - metabolites: !!omap - MAM01442c: 1 - MAM02039c: 1 @@ -162128,7 +162152,7 @@ - confidence_score: 0 - !!omap - id: "MAR09569" - - name: "" + - name: "4-nitrophenyl phosphate phosphohydrolase" - metabolites: !!omap - MAM01020e: -1 - MAM02040e: -1 @@ -162146,7 +162170,7 @@ - confidence_score: 0 - !!omap - id: "MAR03955" - - name: "" + - name: "carbonate hydro-lyase (carbon-dioxide-forming)" - metabolites: !!omap - MAM01596c: -1 - MAM02039c: 1 @@ -162164,7 +162188,7 @@ - confidence_score: 0 - !!omap - id: "MAR03984" - - name: "" + - name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM02040x: 2 - MAM02041x: -2 @@ -162181,7 +162205,7 @@ - confidence_score: 0 - !!omap - id: "MAR04201" - - name: "" + - name: "methanol:hydrogen-peroxide oxidoreductase" - metabolites: !!omap - MAM01831c: 1 - MAM02040c: 2 @@ -162199,7 +162223,7 @@ - confidence_score: 0 - !!omap - id: "MAR04202" - - name: "" + - name: "methanol:NAD+ oxidoreductase" - metabolites: !!omap - MAM01831c: 1 - MAM02039c: 1 @@ -162252,7 +162276,7 @@ - confidence_score: 0 - !!omap - id: "MAR05363" - - name: "" + - name: "Triphosphate phosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -162271,7 +162295,7 @@ - confidence_score: 0 - !!omap - id: "MAR05406" - - name: "" + - name: "carbonate hydro-lyase (carbon-dioxide-forming)" - metabolites: !!omap - MAM01421c: 1 - MAM01596c: -1 @@ -162305,7 +162329,7 @@ - confidence_score: 0 - !!omap - id: "MAR07794" - - name: "" + - name: "diphosphate phosphohydrolase" - metabolites: !!omap - MAM02039n: 1 - MAM02040n: -1 @@ -162323,7 +162347,7 @@ - confidence_score: 0 - !!omap - id: "MAR08617" - - name: "" + - name: "Triphosphate phosphohydrolase" - metabolites: !!omap - MAM02039m: 1 - MAM02040m: -1 @@ -162376,7 +162400,7 @@ - confidence_score: 0 - !!omap - id: "MAR08751" - - name: "" + - name: "carbonate hydro-lyase (carbon-dioxide-forming)" - metabolites: !!omap - MAM01421m: 1 - MAM01596m: -1 @@ -162411,7 +162435,7 @@ - confidence_score: 0 - !!omap - id: "MAR07741" - - name: "" + - name: "Ferredoxin:NADP+ oxidoreductase" - metabolites: !!omap - MAM02039m: -1 - MAM02554m: -1 @@ -162430,7 +162454,7 @@ - confidence_score: 0 - !!omap - id: "MAR09464" - - name: "" + - name: "Dextrin 6-alpha-D-glucanohydrolase" - metabolites: !!omap - MAM01677c: 1 - MAM01678c: -1 @@ -162448,7 +162472,7 @@ - confidence_score: 0 - !!omap - id: "MAR09465" - - name: "" + - name: "Isomaltose 6-alpha-D-glucanohydrolase" - metabolites: !!omap - MAM01965e: 2 - MAM02040e: -1 @@ -162539,7 +162563,7 @@ - confidence_score: 0 - !!omap - id: "MAR09470" - - name: "" + - name: "L-iditol:NAD+ 2-oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02383c: 1 @@ -162558,7 +162582,7 @@ - confidence_score: 0 - !!omap - id: "MAR09471" - - name: "" + - name: "2',3'-Cyclic UMP 3'-nucleotidohydrolase" - metabolites: !!omap - MAM00570c: -1 - MAM00921c: 1 @@ -162796,7 +162820,7 @@ - confidence_score: 0 - !!omap - id: "MAR09484" - - name: "" + - name: "P1,P4-bis(5'-guanosyl)-tetraphosphate guanylylhydrolase" - metabolites: !!omap - MAM02016c: 1 - MAM02034c: 1 @@ -162815,7 +162839,7 @@ - confidence_score: 0 - !!omap - id: "MAR09485" - - name: "" + - name: "[1,4-(N-Acetyl-beta-D-glucosaminyl)]n glycanohydrolase" - metabolites: !!omap - MAM01436c: 1 - MAM01437c: -1 @@ -162833,7 +162857,7 @@ - confidence_score: 0 - !!omap - id: "MAR09487" - - name: "" + - name: "NAD+:poly(adenosine diphosphate D-ribose)ADP-D-ribosyltransferase" - metabolites: !!omap - MAM00136c: -1 - MAM00137c: 1 @@ -162852,7 +162876,7 @@ - confidence_score: 0 - !!omap - id: "MAR09488" - - name: "" + - name: "ATP:phosphorylase-b phosphotransferase" - metabolites: !!omap - MAM00192c: 1 - MAM00193c: -2 @@ -162870,7 +162894,7 @@ - confidence_score: 0 - !!omap - id: "MAR09489" - - name: "" + - name: "[Phosphorylase a] phosphohydrolase" - metabolites: !!omap - MAM00192c: -1 - MAM00193c: 2 @@ -162889,7 +162913,7 @@ - confidence_score: 0 - !!omap - id: "MAR09490" - - name: "" + - name: "Ubiquitin-C-terminal-thiolester hydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -162928,7 +162952,7 @@ - confidence_score: 2 - !!omap - id: "MAR09492" - - name: "" + - name: "Peptidylproline cis-trans-isomerase" - metabolites: !!omap - MAM02709c: -1 - MAM02710c: 1 @@ -162944,7 +162968,7 @@ - confidence_score: 0 - !!omap - id: "MAR09493" - - name: "" + - name: "ATP:myosin-light-chain O-phosphotransferase" - metabolites: !!omap - MAM00190c: -1 - MAM00191c: 1 @@ -162962,7 +162986,7 @@ - confidence_score: 0 - !!omap - id: "MAR09494" - - name: "" + - name: "[Myosin-light-chain]-phosphate phosphohydrolase" - metabolites: !!omap - MAM00190c: 1 - MAM00191c: -1 @@ -162981,7 +163005,7 @@ - confidence_score: 0 - !!omap - id: "MAR09495" - - name: "" + - name: "Acetyl-CoA:histone acetyltransferase" - metabolites: !!omap - MAM01261c: 1 - MAM01597c: -1 @@ -163000,7 +163024,7 @@ - confidence_score: 0 - !!omap - id: "MAR09496" - - name: "" + - name: "Protein-glutamine:amine gamma-glutamyltransferase" - metabolites: !!omap - MAM00201c: -1 - MAM00207c: 1 @@ -163018,7 +163042,7 @@ - confidence_score: 0 - !!omap - id: "MAR09497" - - name: "" + - name: "P1,P3-bis(5'-adenosyl)-triphosphate adenylohydrolase" - metabolites: !!omap - MAM01285c: 1 - MAM01334c: 1 @@ -163037,7 +163061,7 @@ - confidence_score: 0 - !!omap - id: "MAR09498" - - name: "" + - name: "DNA-6-O-methylguanine:protein-L-cysteine S-methyltransferase" - metabolites: !!omap - MAM00200c: -1 - MAM00216c: 1 @@ -163055,7 +163079,7 @@ - confidence_score: 0 - !!omap - id: "MAR09499" - - name: "" + - name: "S-palmitoylprotein hydrolase" - metabolites: !!omap - MAM00200c: 1 - MAM02039c: 1 @@ -163074,7 +163098,7 @@ - confidence_score: 0 - !!omap - id: "MAR09500" - - name: "" + - name: "S-Adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase" - metabolites: !!omap - MAM00202c: 1 - MAM00203c: -1 @@ -163093,7 +163117,7 @@ - confidence_score: 0 - !!omap - id: "MAR09501" - - name: "" + - name: "NADPH:ferricytochrome oxidoreductase" - metabolites: !!omap - MAM01824c: 2 - MAM01826c: -2 @@ -163131,7 +163155,7 @@ - confidence_score: 0 - !!omap - id: "MAR09503" - - name: "" + - name: "ATP:rhodopsin phosphotransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -163149,7 +163173,7 @@ - confidence_score: 0 - !!omap - id: "MAR09504" - - name: "" + - name: "S-Adenosyl-L-methionine:thiopurine S-methyltransferase" - metabolites: !!omap - MAM01166c: -1 - MAM02039c: -1 @@ -163168,7 +163192,7 @@ - confidence_score: 0 - !!omap - id: "MAR09505" - - name: "" + - name: "alpha-tubulin:L-tyrosine ligase (ADP-forming)" - metabolites: !!omap - MAM01285c: -1 - MAM01317c: -1 @@ -163189,7 +163213,7 @@ - confidence_score: 0 - !!omap - id: "MAR09506" - - name: "" + - name: "Polynucleotide 3'-phosphohydrolase" - metabolites: !!omap - MAM00915c: -1 - MAM02040c: -1 @@ -163207,7 +163231,7 @@ - confidence_score: 0 - !!omap - id: "MAR09507" - - name: "" + - name: "5'-Phosphopolynucleotide 5'-phosphohydrolase" - metabolites: !!omap - MAM01129c: -1 - MAM02040c: -1 @@ -163225,7 +163249,7 @@ - confidence_score: 0 - !!omap - id: "MAR09508" - - name: "" + - name: "GTP:mRNA guanylyltransferase" - metabolites: !!omap - MAM00096c: -1 - MAM01864c: 1 @@ -163243,7 +163267,7 @@ - confidence_score: 0 - !!omap - id: "MAR09509" - - name: "" + - name: "S-adenosyl-L-methionine:mRNA (guanine-N7-)-methyltransferase" - metabolites: !!omap - MAM01864c: -1 - MAM02438c: 1 @@ -163261,7 +163285,7 @@ - confidence_score: 0 - !!omap - id: "MAR09510" - - name: "" + - name: "S-adenosyl-L-methionine:5-(N7-methyl 5-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA] 2-O-methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02437c: -1 @@ -163280,7 +163304,7 @@ - confidence_score: 0 - !!omap - id: "MAR09511" - - name: "" + - name: "S-Adenosyl-L-methionine:mRNA (2'-O-methyladenosine-N6-)-methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02435c: 1 @@ -163299,7 +163323,7 @@ - confidence_score: 0 - !!omap - id: "MAR09512" - - name: "" + - name: "Tetradecanoyl-CoA:glycylpeptide N-tetradecanoyltransferase" - metabolites: !!omap - MAM01597c: -1 - MAM02005c: 1 @@ -163317,7 +163341,7 @@ - confidence_score: 0 - !!omap - id: "MAR09513" - - name: "" + - name: "Nomega,Nomega'-dimethyl-L-arginine dimethylamidohydrolase" - metabolites: !!omap - MAM01588c: 1 - MAM01707c: 1 @@ -163335,7 +163359,7 @@ - confidence_score: 0 - !!omap - id: "MAR09514" - - name: "" + - name: "N,N,N-trimethylamine,NADPH:oxygen oxidoreductase (N-oxide-forming)" - metabolites: !!omap - MAM02040c: 1 - MAM02554c: 1 @@ -163355,7 +163379,7 @@ - confidence_score: 0 - !!omap - id: "MAR09515" - - name: "" + - name: "N-Acyl-O-acetylneuraminate O-acetylesterase" - metabolites: !!omap - MAM01252c: 1 - MAM02040c: -1 @@ -163373,7 +163397,7 @@ - confidence_score: 0 - !!omap - id: "MAR09516" - - name: "" + - name: "[Pyruvate dehydrogenase (lipoamide)]-phosphate phosphohydrolase" - metabolites: !!omap - MAM00219c: 1 - MAM00220c: -1 @@ -163391,7 +163415,7 @@ - confidence_score: 0 - !!omap - id: "MAR09517" - - name: "" + - name: "ATP:[pyruvate dehydrogenase (lipoamide)] phosphotransferase" - metabolites: !!omap - MAM00219c: -1 - MAM00220c: 1 @@ -163410,7 +163434,7 @@ - confidence_score: 0 - !!omap - id: "MAR09518" - - name: "" + - name: "tRNA-guanosine34:queuine tRNA-D-ribosyltransferase" - metabolites: !!omap - MAM02037c: -1 - MAM02820c: 1 @@ -163428,7 +163452,7 @@ - confidence_score: 0 - !!omap - id: "MAR09519" - - name: "" + - name: "S-Adenosyl-L-methionine:tRNA guanine N2-methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02871c: -1 @@ -163447,7 +163471,7 @@ - confidence_score: 0 - !!omap - id: "MAR09520" - - name: "" + - name: "S-Adenosyl-L-methionine:tRNA guanine N7-methyltransferase" - metabolites: !!omap - MAM02871c: -1 - MAM02877c: 1 @@ -163465,7 +163489,7 @@ - confidence_score: 0 - !!omap - id: "MAR09521" - - name: "" + - name: "S-adenosyl-L-methionine:tRNA 5-methylaminomethyl-2-thiouridine methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02871c: -1 @@ -163484,7 +163508,7 @@ - confidence_score: 0 - !!omap - id: "MAR09522" - - name: "" + - name: "Aminoacyl-tRNA aminoacylhydrolase" - metabolites: !!omap - MAM02040c: -1 - MAM02625c: 1 @@ -163502,7 +163526,7 @@ - confidence_score: 0 - !!omap - id: "MAR09523" - - name: "" + - name: "delta2-isopentenyl-diphosphate:tRNA isopentenyltransferase" - metabolites: !!omap - MAM01706c: 1 - MAM02759c: -1 @@ -163520,7 +163544,7 @@ - confidence_score: 0 - !!omap - id: "MAR09524" - - name: "" + - name: "tRNA-uridine uracilmutase" - metabolites: !!omap - MAM03085c: -1 - MAM03087c: 1 @@ -163555,7 +163579,7 @@ - confidence_score: 0 - !!omap - id: "MAR09527" - - name: "" + - name: "Acetyl-CoA:arylamine N-acetyltransferase" - metabolites: !!omap - MAM01251c: -1 - MAM01261c: 1 @@ -163573,7 +163597,7 @@ - confidence_score: 0 - !!omap - id: "MAR09528" - - name: "" + - name: "ATP:beta-adrenergic-receptor phosphotransferase" - metabolites: !!omap - MAM00187c: -1 - MAM01285c: 1 @@ -163592,7 +163616,7 @@ - confidence_score: 0 - !!omap - id: "MAR09529" - - name: "" + - name: "N-Acetylmuramoyl-Ala amidohydrolase" - metabolites: !!omap - MAM01307c: 1 - MAM02040c: -1 @@ -163610,7 +163634,7 @@ - confidence_score: 0 - !!omap - id: "MAR09530" - - name: "" + - name: "N4-(beta-N-Acetyl-D-glucosaminyl)-L-asparagine amidohydrolase" - metabolites: !!omap - MAM01370c: 1 - MAM02039c: 1 @@ -163629,7 +163653,7 @@ - confidence_score: 0 - !!omap - id: "MAR09531" - - name: "" + - name: "N-linked-glycopeptide-(N-acetyl-beta-D-glucosaminyl)-L-asparagine amidohydrolase" - metabolites: !!omap - MAM01018c: -1 - MAM02040c: -1 @@ -163647,7 +163671,7 @@ - confidence_score: 0 - !!omap - id: "MAR09532" - - name: "" + - name: "Peptide-L-aspartate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)" - metabolites: !!omap - MAM01306c: -1 - MAM01596c: 1 @@ -163667,7 +163691,7 @@ - confidence_score: 0 - !!omap - id: "MAR09534" - - name: "" + - name: "Indole-3-acetamide amidohydrolase" - metabolites: !!omap - MAM00155c: -1 - MAM02039c: 1 @@ -163686,7 +163710,7 @@ - confidence_score: 0 - !!omap - id: "MAR09535" - - name: "" + - name: "ATP:[3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] phosphotransferase" - metabolites: !!omap - MAM00822c: 1 - MAM00823c: -1 @@ -163705,7 +163729,7 @@ - confidence_score: 0 - !!omap - id: "MAR09536" - - name: "" + - name: "sn-Glycero-3-phospho-1-inositol inositolphosphohydrolase" - metabolites: !!omap - MAM01983c: 1 - MAM02039c: 1 @@ -163724,7 +163748,7 @@ - confidence_score: 0 - !!omap - id: "MAR09537" - - name: "" + - name: "1-(sn-glycero-3-phospho)-1D-myo-inositol glycerophosphohydrolase" - metabolites: !!omap - MAM02039c: 1 - MAM02040c: -1 @@ -163743,7 +163767,7 @@ - confidence_score: 0 - !!omap - id: "MAR09538" - - name: "" + - name: "NADH:(quinone-acceptor) oxidoreductase" - metabolites: !!omap - MAM02039c: -1 - MAM02552c: 1 @@ -163762,7 +163786,7 @@ - confidence_score: 0 - !!omap - id: "MAR09539" - - name: "" + - name: "Vitamin K:oxidized-dithiothreitol oxidoreductase" - metabolites: !!omap - MAM01713c: 1 - MAM02040c: -1 @@ -163801,7 +163825,7 @@ - confidence_score: 0 - !!omap - id: "MAR09541" - - name: "" + - name: "L-arginyl-tRNA(Arg):protein arginyltransferase" - metabolites: !!omap - MAM00196c: 1 - MAM02039c: -1 @@ -163820,7 +163844,7 @@ - confidence_score: 0 - !!omap - id: "MAR09542" - - name: "" + - name: "[peptide]-glycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)" - metabolites: !!omap - MAM01368c: 1 - MAM01655c: -1 @@ -163840,7 +163864,7 @@ - confidence_score: 0 - !!omap - id: "MAR09543" - - name: "" + - name: "L-Glutaminyl-peptide gamma-gluramyltransferase (cyclizing)" - metabolites: !!omap - MAM01128c: 1 - MAM02375c: -1 @@ -163857,7 +163881,7 @@ - confidence_score: 0 - !!omap - id: "MAR09544" - - name: "" + - name: "peptide-L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (S)-S-oxide-forming]" - metabolites: !!omap - MAM02040c: -1 - MAM02666c: -1 @@ -163876,7 +163900,7 @@ - confidence_score: 0 - !!omap - id: "MAR09545" - - name: "" + - name: "protein-L-lysine:oxygen 6-oxidoreductase (deaminating)" - metabolites: !!omap - MAM02040c: -1 - MAM02041c: 1 @@ -163896,7 +163920,7 @@ - confidence_score: 0 - !!omap - id: "MAR09546" - - name: "" + - name: "RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)" - metabolites: !!omap - MAM01334c: -1 - MAM01371c: 1 @@ -163915,7 +163939,7 @@ - confidence_score: 0 - !!omap - id: "MAR09547" - - name: "" + - name: "UDP-N-acetyl-D-glucosamine:lysosomal-enzyme N-acetylglucosaminephosphotransferase" - metabolites: !!omap - MAM02427c: -1 - MAM02428c: 1 @@ -163933,7 +163957,7 @@ - confidence_score: 0 - !!omap - id: "MAR09548" - - name: "" + - name: "glycoprotein-N-acetyl-D-glucosaminyl-phospho-D-mannose N-acetyl-D-glucosaminylphosphohydrolase" - metabolites: !!omap - MAM02002c: -1 - MAM02003c: 1 @@ -163951,7 +163975,7 @@ - confidence_score: 0 - !!omap - id: "MAR09549" - - name: "" + - name: "S-Adenosyl-L-methionine:2-(3-carboxy-3-aminopropyl)-L-histidine methyltransferase" - metabolites: !!omap - MAM02039c: -1 - MAM02699c: 1 @@ -163970,7 +163994,7 @@ - confidence_score: 0 - !!omap - id: "MAR09550" - - name: "" + - name: "[methionine synthase]-methylcob(I)alamin,S-adenosylhomocysteine:NADP+ oxidoreductase" - metabolites: !!omap - MAM00188c: -2 - MAM00189c: 2 @@ -163991,7 +164015,7 @@ - confidence_score: 0 - !!omap - id: "MAR09551" - - name: "" + - name: "Formyl-L-methionyl peptide amidohydrolase" - metabolites: !!omap - MAM01833c: 1 - MAM01838c: -1 @@ -164010,7 +164034,7 @@ - confidence_score: 0 - !!omap - id: "MAR09552" - - name: "" + - name: "diphospho-myo-inositol-polyphosphate diphosphohydrolase" - metabolites: !!omap - MAM01710c: -1 - MAM02039c: 1 @@ -164049,7 +164073,7 @@ - confidence_score: 0 - !!omap - id: "MAR09801" - - name: "" + - name: "GTP:5-hydroxy-L-lysine O-phosphotransferase" - metabolites: !!omap - MAM01948c: 1 - MAM02034c: -1 @@ -164067,7 +164091,7 @@ - confidence_score: 0 - !!omap - id: "MAR09807" - - name: "" + - name: "(5R)-5-phosphooxy-L-lysine phosphate-lyase (deaminating" - metabolites: !!omap - MAM00631c: 1 - MAM02039c: 1 @@ -164087,7 +164111,7 @@ - confidence_score: 0 - !!omap - id: "MAR09554" - - name: "" + - name: "acyloxyacyl hydrolase" - metabolites: !!omap - MAM00683c: -1 - MAM00774c: 1 @@ -164106,7 +164130,7 @@ - confidence_score: 0 - !!omap - id: "MAR09555" - - name: "" + - name: "beta-D-Glucosyl-2-coumarinate glucohydrolase" - metabolites: !!omap - MAM01578c: 1 - MAM01581c: -1 @@ -164143,7 +164167,7 @@ - confidence_score: 0 - !!omap - id: "MAR09557" - - name: "" + - name: "N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphrylating)" - metabolites: !!omap - MAM02039m: -1 - MAM02535m: 1 @@ -164163,7 +164187,7 @@ - confidence_score: 0 - !!omap - id: "MAR09558" - - name: "" + - name: "2-phosphoglycolate phosphohydrolase" - metabolites: !!omap - MAM00675c: -1 - MAM01998c: 1 @@ -164181,7 +164205,7 @@ - confidence_score: 0 - !!omap - id: "MAR09559" - - name: "" + - name: "CTP:choline-phosphate cytidylyltransferase" - metabolites: !!omap - MAM01594c: 1 - MAM01623c: -1 @@ -164200,7 +164224,7 @@ - confidence_score: 0 - !!omap - id: "MAR09560" - - name: "" + - name: "CTP:ethanolamine-phosphate cytidylyltransferase" - metabolites: !!omap - MAM00632c: -1 - MAM01591c: 1 @@ -164219,7 +164243,7 @@ - confidence_score: 0 - !!omap - id: "MAR09561" - - name: "" + - name: "retinyl-palmitate palmitohydrolase" - metabolites: !!omap - MAM02039e: 1 - MAM02040e: -1 @@ -164258,7 +164282,7 @@ - confidence_score: 0 - !!omap - id: "MAR09563" - - name: "" + - name: "Aldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039c: 2 - MAM02040c: -1 @@ -164278,7 +164302,7 @@ - confidence_score: 0 - !!omap - id: "MAR09564" - - name: "" + - name: "Aldehyde:NAD+ oxidoreductase" - metabolites: !!omap - MAM02039m: 2 - MAM02040m: -1 @@ -164298,7 +164322,7 @@ - confidence_score: 0 - !!omap - id: "MAR09565" - - name: "" + - name: "trans-2-Methyl-5-isopropylhexa-2,5-dienoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00773m: 1 - MAM02040m: -1 @@ -164315,7 +164339,7 @@ - confidence_score: 0 - !!omap - id: "MAR09566" - - name: "" + - name: "trans-2-Methyl-5-isopropylhexa-2,5-dienoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00773x: 1 - MAM02040x: -1 @@ -164332,7 +164356,7 @@ - confidence_score: 0 - !!omap - id: "MAR09567" - - name: "" + - name: "3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00773m: 1 - MAM01579m: -1 @@ -164349,7 +164373,7 @@ - confidence_score: 0 - !!omap - id: "MAR09568" - - name: "" + - name: "3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA hydro-lyase" - metabolites: !!omap - MAM00773x: 1 - MAM01579x: -1 @@ -164366,7 +164390,7 @@ - confidence_score: 0 - !!omap - id: "MAR09570" - - name: "" + - name: "P1,P4-bis(5'-adenosyl)-tetraphosphate adenylohydrolase" - metabolites: !!omap - MAM01334c: 1 - MAM01371c: 1 @@ -164385,7 +164409,7 @@ - confidence_score: 0 - !!omap - id: "MAR09571" - - name: "" + - name: "(5-glutamyl)-peptide:amino-acid 5-glutamyltransferase" - metabolites: !!omap - MAM01926e: -1 - MAM01974e: 1 @@ -164404,7 +164428,7 @@ - confidence_score: 0 - !!omap - id: "MAR09572" - - name: "" + - name: "gamma-glutamyl-beta-aminopropiononitrile amidohydrolase" - metabolites: !!omap - MAM01596e: 1 - MAM01925e: 1 @@ -164462,7 +164486,7 @@ - confidence_score: 0 - !!omap - id: "MAR09575" - - name: "" + - name: "5-methyltetrahydropteroyltri-L-glutamate:L-selenohomocysteine Se-methyltransferase" - metabolites: !!omap - MAM01114c: -1 - MAM02890c: -1 @@ -164654,7 +164678,7 @@ - confidence_score: 0 - !!omap - id: "MAR09806" - - name: "" + - name: "glutathione:insulin oxidoreductase" - metabolites: !!omap - MAM02026c: -2 - MAM02027c: 1 @@ -164672,7 +164696,7 @@ - confidence_score: 0 - !!omap - id: "MAR00010" - - name: "" + - name: "1-acylglycerol acylhydrolase" - metabolites: !!omap - MAM00510c: -1 - MAM01820c: 1 @@ -166941,7 +166965,7 @@ - confidence_score: 0 - !!omap - id: "MAR00007" - - name: "" + - name: "triacylglycerol acylhydrolase" - metabolites: !!omap - MAM00241e: 1 - MAM01820e: 1 @@ -166959,7 +166983,7 @@ - confidence_score: 0 - !!omap - id: "MAR00008" - - name: "" + - name: "1,2-diacyl-sn-glycerol acylhydrolase" - metabolites: !!omap - MAM00241e: -1 - MAM00510e: 1 @@ -169987,7 +170011,7 @@ - confidence_score: 0 - !!omap - id: "MAR01919" - - name: "" + - name: "3'-phosphoadenylyl-sulfate:cholesterol sulfotransferase" - metabolites: !!omap - MAM01450c: -1 - MAM01512c: 1 @@ -170090,7 +170114,7 @@ - confidence_score: 0 - !!omap - id: "MAR03964" - - name: "" + - name: "ATP phosphohydrolase" - metabolites: !!omap - MAM01285c: 1 - MAM01371c: -1 @@ -196525,7 +196549,7 @@ - confidence_score: 0 - !!omap - id: "MAR02141" - - name: "" + - name: "calcitriol,adrenodoxin:oxygen oxidoreductase (24-hydroxylating)" - metabolites: !!omap - MAM01416m: 1 - MAM01417m: -1 @@ -196800,7 +196824,7 @@ - confidence_score: 0 - !!omap - id: "MAR04184" - - name: "" + - name: "sulfite:ferricytochrome-c oxidoreductase" - metabolites: !!omap - MAM01824m: -2 - MAM01826m: 2 @@ -199152,7 +199176,7 @@ - confidence_score: 0 - !!omap - id: "MAR06328" - - name: "" + - name: "ATP:ADP phosphatransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01285m: 1 @@ -202285,7 +202309,7 @@ - confidence_score: 0 - !!omap - id: "MAR04908" - - name: "" + - name: "ATP:ADP phosphatransferase" - metabolites: !!omap - MAM01285c: -1 - MAM01285x: 1 @@ -203832,22 +203856,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR08639" - - name: "" - - metabolites: !!omap - - MAM01721c: -1 - - MAM01721n: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000030066 and ENSG00000047410 and ENSG00000058804 and ENSG00000069248 and ENSG00000075188 and ENSG00000085415 and ENSG00000093000 and ENSG00000094914 and ENSG00000095319 and ENSG00000101146 and ENSG00000102900 and ENSG00000108559 and ENSG00000110713 and ENSG00000111581 and ENSG00000113569 and ENSG00000119392 and ENSG00000120253 and ENSG00000124789 and ENSG00000125450 and ENSG00000126883 and ENSG00000132182 and ENSG00000136243 and ENSG00000138750 and ENSG00000139496 and ENSG00000153201 and ENSG00000153207 and ENSG00000155561 and ENSG00000157020 and ENSG00000157349 and ENSG00000163002 and ENSG00000196313 and ENSG00000213024" - - rxnNotes: "" - - rxnFrom: "HMRdatabase" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 2 - !!omap - id: "MAR08789" - name: "" @@ -204490,7 +204498,7 @@ - confidence_score: 0 - !!omap - id: "MAR04907" - - name: "" + - name: "ATP:ADP phosphatransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01285l: -1 @@ -209725,7 +209733,7 @@ - confidence_score: 0 - !!omap - id: "MAR04856" - - name: "" + - name: "alpha-D-Glucose 6-phosphate ketol-isomerase" - metabolites: !!omap - MAM01968c: -1 - MAM01968r: 1 @@ -209891,7 +209899,7 @@ - confidence_score: 0 - !!omap - id: "MAR04906" - - name: "" + - name: "ATP:ADP phosphatransferase" - metabolites: !!omap - MAM01285c: 1 - MAM01285r: -1 @@ -248125,25 +248133,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR08973" - - name: "Phosphogluconate Dehydrogenase" - - metabolites: !!omap - - MAM01169c: -3 - - MAM01596c: 3 - - MAM02554c: -3 - - MAM02555c: 3 - - MAM02846c: 3 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000142657" - - rxnNotes: "Harpers illustrated Biochemistry (2009) 28th edition pages 174-183, ISBN:9781282335806" - - rxnFrom: "Recon3D" - - eccodes: "1.1.1.44" - - references: "PMID:4382012;PMID:13575411" - - subsystem: - - "Pentose phosphate pathway" - - confidence_score: 0 - !!omap - id: "MAR08974" - name: "Hypotaurine Oxidase, Extracellular" @@ -292975,7 +292964,7 @@ - rxnNotes: "DOI:10.1007/978-1-4419-0840-7" - rxnFrom: "Recon3D" - eccodes: "" - - references: PMID:17655371" + - references: "PMID:17655371" - subsystem: - "Drug metabolism" - confidence_score: 0 @@ -304486,7 +304475,7 @@ - confidence_score: 0 - !!omap - id: "MAR10066" - - name: "" + - name: "20alpha-Hydroxy-4-pregnen-3-one:NAD+ 20-oxidoreductase" - metabolites: !!omap - MAM00580c: -1 - MAM02039c: 1 @@ -304577,7 +304566,7 @@ - confidence_score: 0 - !!omap - id: "MAR10071" - - name: "" + - name: "5alpha-pregnan-20alpha-ol-3-one:NADP+ 20-oxidoreductase" - metabolites: !!omap - MAM01072c: 1 - MAM02039c: 1 @@ -304596,7 +304585,7 @@ - confidence_score: 0 - !!omap - id: "MAR10072" - - name: "" + - name: "17alpha,20alpha-Dihydroxypregn-4-en-3-one:NADP+ 20-oxidoreductase" - metabolites: !!omap - MAM00409c: 1 - MAM02039c: 1 @@ -305405,7 +305394,7 @@ - confidence_score: 0 - !!omap - id: "MAR10116" - - name: "" + - name: "5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate carboxy-lyase [(S)-allantoin-forming]" - metabolites: !!omap - MAM01313c: 1 - MAM01596c: 1 @@ -305744,6 +305733,54 @@ - subsystem: - "Metabolism of other amino acids" - confidence_score: 4 + - !!omap + - id: "MAR13084" + - name: "" + - metabolites: !!omap + - MAM01639c: -1 + - MAM01639n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "" + - rxnNotes: "" + - rxnFrom: "" + - eccodes: "" + - references: "" + - subsystem: + - "Transport reactions" + - confidence_score: 0 + - !!omap + - id: "MAR13085" + - name: "" + - metabolites: !!omap + - MAM01686c: -1 + - MAM01686n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "" + - rxnNotes: "" + - rxnFrom: "" + - eccodes: "" + - references: "" + - subsystem: + - "Transport reactions" + - confidence_score: 0 + - !!omap + - id: "MAR13086" + - name: "" + - metabolites: !!omap + - MAM02847c: 1 + - MAM02847n: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000030066 and ENSG00000047410 and ENSG00000058804 and ENSG00000069248 and ENSG00000075188 and ENSG00000085415 and ENSG00000093000 and ENSG00000094914 and ENSG00000095319 and ENSG00000101146 and ENSG00000102900 and ENSG00000108559 and ENSG00000110713 and ENSG00000111581 and ENSG00000113569 and ENSG00000119392 and ENSG00000120253 and ENSG00000124789 and ENSG00000125450 and ENSG00000126883 and ENSG00000132182 and ENSG00000136243 and ENSG00000138750 and ENSG00000139496 and ENSG00000153201 and ENSG00000153207 and ENSG00000155561 and ENSG00000157020 and ENSG00000157349 and ENSG00000163002 and ENSG00000196313 and ENSG00000213024" + - rxnNotes: "" + - rxnFrom: "" + - eccodes: "" + - references: "PMID:25836925" + - subsystem: + - "Transport reactions" + - confidence_score: 2 - genes: - !!omap - id: "ENSG00000000419" diff --git a/model/metabolites.tsv b/model/metabolites.tsv index bca9e4fc..79f5a66a 100644 --- a/model/metabolites.tsv +++ b/model/metabolites.tsv @@ -183,7 +183,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM00095x" "MAM00095" "c226coa" "C16169" "" "CHEBI:65132" "" "LMFA07050050" "CE4827" "" "CE4827;c226coa" "MNXM3234;MNXM91778" "m00095p" "m00095p" "MAM00095r" "MAM00095" "c226coa" "C16169" "" "CHEBI:65132" "" "LMFA07050050" "CE4827" "" "CE4827;c226coa" "MNXM3234;MNXM91778" "m00095r" "m00095r" "MAM00096c" "MAM00096" "" "C02100" "" "" "" "" "" "" "M00096" "MNXM92760" "m00096c" "m00096c" -"MAM00097e" "MAM00097" "gluala" "C03740" "HMDB06248" "CHEBI:50619" "440103" "" "" "" "gluala" "MNXM59390" "m00097s" "m00097s" +"MAM00097e" "MAM00097" "gluala" "" "HMDB06248" "CHEBI:50619" "440103" "" "" "" "gluala" "MNXM59390" "m00097s" "m00097s" "MAM00098c" "MAM00098" "" "" "" "" "" "" "CE2566" "" "CE2566" "MNXM162637" "m00098c" "m00098c" "MAM00098x" "MAM00098" "" "" "" "" "" "" "CE2566" "" "CE2566" "MNXM162637" "m00098p" "m00098p" "MAM00098r" "MAM00098" "" "" "" "" "" "" "CE2566" "" "CE2566" "MNXM162637" "m00098r" "m00098r" @@ -1312,7 +1312,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM00810e" "MAM00810" "" "C05394" "" "CHEBI:27453" "440653" "" "" "HC01440" "HC01440" "MNXM4339" "m00810s" "m00810s" "MAM00811c" "MAM00811" "" "" "" "" "" "" "CE4811" "" "CE4811" "MNXM164249" "m00811c" "m00811c" "MAM00812e" "MAM00812" "" "C05403" "" "" "" "" "" "HC01446" "HC01446" "MNXM36578" "m00812s" "m00812s" -"MAM00813x" "MAM00813" "" "C07297" "HMDB02057" "CHEBI:28542" "441253" "" "" "" "C07297" "MNXM4346" "m00813p" "m00813p" +"MAM00813x" "MAM00813" "" "C07297" "HMDB02057" "CHEBI:57291" "441253" "" "" "" "C07297" "MNXM4346" "m00813p" "m00813p" "MAM00814x" "MAM00814" "" "" "" "" "" "LMFA07050068" "CE4826" "" "CE4826" "MNXM91783" "m00814p" "m00814p" "MAM00815c" "MAM00815" "mercplac" "C05823" "" "CHEBI:28580" "160645" "" "" "" "mercplac" "MNXM6822;MNXM91416" "m00815c" "m00815c" "MAM00816c" "MAM00816" "mercplaccys" "" "HMDB06512" "" "193536" "" "" "" "mercplaccys" "MNXM10053" "m00816c" "m00816c" @@ -2674,10 +2674,10 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM01613g" "MAM01613" "core8" "" "" "" "" "" "" "" "core8" "MNXM16842" "m01613g" "m01613g" "MAM01613c" "MAM01613" "core8" "" "" "" "" "" "" "" "core8" "MNXM16842" "m01613c" "m01613c" "MAM01613e" "MAM01613" "core8" "" "" "" "" "" "" "" "core8" "MNXM16842" "m01613s" "m01613s" -"MAM01614c" "MAM01614" "crtstrn" "" "" "CHEBI:101161" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614c" "m01614c" -"MAM01614m" "MAM01614" "crtstrn" "" "" "CHEBI:101161" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614m" "m01614m" -"MAM01614r" "MAM01614" "crtstrn" "" "" "CHEBI:101161" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614r" "m01614r" -"MAM01614e" "MAM01614" "crtstrn" "" "" "CHEBI:101161" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614s" "m01614s" +"MAM01614c" "MAM01614" "crtstrn" "" "" "CHEBI:16827" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614c" "m01614c" +"MAM01614m" "MAM01614" "crtstrn" "" "" "CHEBI:16827" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614m" "m01614m" +"MAM01614r" "MAM01614" "crtstrn" "" "" "CHEBI:16827" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614r" "m01614r" +"MAM01614e" "MAM01614" "crtstrn" "" "" "CHEBI:16827" "" "LMST02030092" "" "" "crtstrn" "MNXM162953;MNXM859" "m01614s" "m01614s" "MAM01615c" "MAM01615" "crtsl" "C00735" "HMDB00063" "CHEBI:17650" "657311" "LMST02030001" "" "" "crtsl" "MNXM162531;MNXM543" "m01615c" "m01615c" "MAM01615m" "MAM01615" "crtsl" "C00735" "HMDB00063" "CHEBI:17650" "657311" "LMST02030001" "" "" "crtsl" "MNXM162531;MNXM543" "m01615m" "m01615m" "MAM01615r" "MAM01615" "crtsl" "C00735" "HMDB00063" "CHEBI:17650" "657311" "LMST02030001" "" "" "crtsl" "MNXM162531;MNXM543" "m01615r" "m01615r" @@ -2717,7 +2717,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM01630m" "MAM01630" "cytd" "C00475" "HMDB00089" "CHEBI:17562" "6175" "" "" "HC00381" "cytd" "MNXM338" "m01630m" "m01630m" "MAM01630n" "MAM01630" "cytd" "C00475" "HMDB00089" "CHEBI:17562" "6175" "" "" "HC00381" "cytd" "MNXM338" "m01630n" "m01630n" "MAM01630e" "MAM01630" "cytd" "C00475" "HMDB00089" "CHEBI:17562" "6175" "" "" "HC00381" "cytd" "MNXM338" "m01630s" "m01630s" -"MAM01631m" "MAM01631" "" "C00524" "" "CHEBI:18070" "" "" "" "" "M01631" "MNXM5749" "m01631m" "m01631m" +"MAM01631m" "MAM01631" "" "C00524" "" "CHEBI:83739" "" "" "" "" "M01631" "MNXM5749" "m01631m" "m01631m" "MAM01632c" "MAM01632" "csn" "C00380" "HMDB00630" "CHEBI:16040" "597" "" "" "" "csn" "MNXM761" "m01632c" "m01632c" "MAM01632e" "MAM01632" "csn" "C00380" "HMDB00630" "CHEBI:16040" "597" "" "" "" "csn" "MNXM761" "m01632s" "m01632s" "MAM01633c" "MAM01633" "3aib__D" "C01205" "" "CHEBI:16320" "5459822" "" "" "HC00715" "3aib_D" "MNXM162802;MNXM786" "m01633c" "m01633c" @@ -2735,6 +2735,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM01638e" "MAM01638" "ala__D" "C00133" "HMDB01310" "CHEBI:15570" "71080" "" "" "" "ala_D" "MNXM156" "m01638s" "m01638s" "MAM01639c" "MAM01639" "damp" "C00360" "" "CHEBI:17713" "12599" "" "" "HC00304" "damp" "MNXM432" "m01639c" "m01639c" "MAM01639l" "MAM01639" "damp" "C00360" "" "CHEBI:17713" "12599" "" "" "HC00304" "damp" "MNXM432" "m01639l" "m01639l" +"MAM01639n" "MAM01639" "damp" "C00360" "" "CHEBI:17713" "12599" "" "" "HC00304" "damp" "MNXM432" "" "" "MAM01640c" "MAM01640" "arg__D" "C00792" "HMDB03416" "CHEBI:15816" "71070" "" "" "" "arg_D" "MNXM1552;MNXM70" "m01640c" "m01640c" "MAM01640x" "MAM01640" "arg__D" "C00792" "HMDB03416" "CHEBI:15816" "71070" "" "" "" "arg_D" "MNXM1552;MNXM70" "m01640p" "m01640p" "MAM01640e" "MAM01640" "arg__D" "C00792" "HMDB03416" "CHEBI:15816" "71070" "" "" "" "arg_D" "MNXM1552;MNXM70" "m01640s" "m01640s" @@ -2772,7 +2773,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM01655c" "MAM01655" "dhdascb" "C00425" "HMDB01264" "CHEBI:17242" "210328" "" "" "" "dhdascb" "MNXM250" "m01655c" "m01655c" "MAM01655e" "MAM01655" "dhdascb" "C00425" "HMDB01264" "CHEBI:17242" "210328" "" "" "" "dhdascb" "MNXM250" "m01655s" "m01655s" "MAM01656c" "MAM01656" "dedol__L" "" "" "" "" "" "" "" "dedol_L" "MNXM148199" "m01656c" "m01656c" -"MAM01657c" "MAM01657" "dedoldp__L" "C05859" "" "" "" "" "" "" "dedoldp_L" "MNXM148197" "m01657c" "m01657c" +"MAM01657c" "MAM01657" "dedoldp__L" "C05859" "" "CHEBI:136960" "" "" "" "" "dedoldp_L" "MNXM148197" "m01657c" "m01657c" "MAM01658c" "MAM01658" "dedolp__L" "" "" "" "" "" "" "" "dedolp_L" "MNXM148198" "m01658c" "m01658c" "MAM01659c" "MAM01659" "dheas" "C04555" "HMDB01032" "CHEBI:16814" "12594" "" "" "HC01314" "dheas" "MNXM991" "m01659c" "m01659c" "MAM01659r" "MAM01659" "dheas" "C04555" "HMDB01032" "CHEBI:16814" "12594" "" "" "HC01314" "dheas" "MNXM991" "m01659r" "m01659r" @@ -2837,6 +2838,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM01686c" "MAM01686" "dgmp" "C00362" "" "CHEBI:16192" "65059" "" "" "HC00306" "dgmp" "MNXM546" "m01686c" "m01686c" "MAM01686l" "MAM01686" "dgmp" "C00362" "" "CHEBI:16192" "65059" "" "" "HC00306" "dgmp" "MNXM546" "m01686l" "m01686l" "MAM01686m" "MAM01686" "dgmp" "C00362" "" "CHEBI:16192" "65059" "" "" "HC00306" "dgmp" "MNXM546" "m01686m" "m01686m" +"MAM01686n" "MAM01686" "dgmp" "C00362" "" "CHEBI:16192" "65059" "" "" "HC00306" "dgmp" "MNXM546" "" "" "MAM01687r" "MAM01687" "dgpi_prot_hs" "" "" "" "" "" "" "" "dgpi_prot_hs" "MNXM17162" "m01687r" "m01687r" "MAM01687c" "MAM01687" "dgpi_prot_hs" "" "" "" "" "" "" "" "dgpi_prot_hs" "MNXM17162" "m01687c" "m01687c" "MAM01687e" "MAM01687" "dgpi_prot_hs" "" "" "" "" "" "" "" "dgpi_prot_hs" "MNXM17162" "m01687s" "m01687s" @@ -4937,6 +4939,7 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa "MAM02846c" "MAM02846" "ru5p__D" "C00199" "" "CHEBI:17363" "439184" "" "" "HC00188" "ru5p_D" "MNXM145;MNXM186" "m02846c" "m02846c" "MAM02846r" "MAM02846" "ru5p__D" "C00199" "" "CHEBI:17363" "439184" "" "" "HC00188" "ru5p_D" "MNXM145;MNXM186" "m02846r" "m02846r" "MAM02847c" "MAM02847" "" "C00046" "" "" "" "" "" "" "M02847" "MNXM1248;MNXM90337" "m02847c" "m02847c" +"MAM02847n" "MAM02847" "" "C00046" "" "" "" "" "" "" "M02847" "MNXM1248;MNXM90337" "" "" "MAM02848c" "MAM02848" "" "C03638" "" "" "" "" "" "" "M02848" "MNXM93895" "m02848c" "m02848c" "MAM02849c" "MAM02849" "" "C04312" "" "" "" "" "" "" "M02849" "MNXM93896" "m02849c" "m02849c" "MAM02850c" "MAM02850" "" "C14868" "" "" "" "" "" "" "M02850" "MNXM12905" "m02850c" "m02850c" diff --git a/model/reactions.tsv b/model/reactions.tsv index 377fe11a..0db4feee 100644 --- a/model/reactions.tsv +++ b/model/reactions.tsv @@ -1326,7 +1326,7 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR04187" "R00508" "BPNT2" "R00508C" "r0132" "" "BPNT2" "MNXR96322" "HMR_4187" "RCR10598" "" 0 "" "" "HMR_4187" "MAR04188" "" "" "" "r1332" "" "r1332" "MNXR105460" "HMR_4188" "RCR14479" "" 0 "" "" "HMR_4188" "MAR04701" "R07243" "" "" "" "" "HMR_4701" "MNXR110928" "HMR_4701" "RCR11649" "" 0 "" "" "HMR_4701" -"MAR04840" "R00864" "" "" "r0795" "" "r0795" "MNXR105387" "HMR_4840" "RCR11650" "" 0 "" "" "HMR_4840" +"MAR04840" "R00864" "" "" "r0795" "" "r0795" "MNXR105387" "HMR_4840" "RCR11650" "" 1 "" "" "HMR_4840" "MAR04842" "" "" "" "r0800" "" "r0800" "MNXR105389" "HMR_4842" "RCR14480" "" 0 "" "" "HMR_4842" "MAR08662" "R02405" "ITCOAL1m" "" "" "" "ITCOAL1m" "MNXR100883" "HMR_8662" "RCR11651" "" 0 "" "" "HMR_8662" "MAR08663" "R02404" "ITCOALm" "" "" "" "ITCOALm" "MNXR100884" "HMR_8663" "RCR11652" "" 0 "" "" "HMR_8663" @@ -4977,15 +4977,15 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR03984" "R00009" "CATp" "" "r0012" "" "CATp" "MNXR96455" "HMR_3984" "RCR11007" "" 0 "RHEA:20310" "RHEA:20309" "HMR_3984" "MAR04201" "R00602" "PRDX" "R00602C" "r0162" "" "PRDX" "MNXR103159" "HMR_4201" "RCR14124" "" 0 "RHEA:30692" "RHEA:30691" "HMR_4201" "MAR04202" "R00605" "ALCD1" "" "" "" "ALCD1" "MNXR95708" "HMR_4202" "RCR14125" "" 0 "RHEA:19402" "RHEA:19401" "HMR_4202" -"MAR05127" "" "" "" "r1085" "" "" "" "HMR_5127" "RCR14752" "" 0 "" "" "HMR_5127" +"MAR05127" "" "" "" "r1085" "" "" "" "HMR_5127" "RCR14752" "" 1 "" "" "HMR_5127" "MAR05128" "" "EX_nh4_e" "" "r1086" "" "" "MNXR98786" "HMR_5128" "RCR30284" "" 0 "" "" "HMR_5128" "MAR05363" "R00138" "PPA2" "" "r1296" "" "PPA2" "MNXR103069" "HMR_5363" "RCR11008" "" 0 "" "" "HMR_5363" "MAR05406" "R00132" "H2CO3D" "" "r1417" "" "H2CO3D" "MNXR100482" "HMR_5406" "RCR14126" "" 0 "" "" "HMR_5406" "MAR05409" "" "" "" "r1420" "" "HMR_5409" "" "HMR_5409" "RCR30285" "" 0 "" "" "HMR_5409" "MAR07794" "R00004" "PPAn" "" "" "" "PPAn" "MNXR100808" "HMR_7794" "RCR10436" "" 0 "RHEA:24577" "RHEA:24576" "HMR_7794" "MAR08617" "R00138" "PPA2m" "" "" "" "PPA2m" "MNXR103069" "HMR_8617" "RCR14127" "" 0 "" "" "HMR_8617" -"MAR08749" "" "H2CO3D2" "" "" "" "HMR_8749" "MNXR100483" "HMR_8749" "RCR14128" "" 0 "" "" "HMR_8749" -"MAR08750" "" "H2CO3D2m" "" "" "" "HMR_8750" "MNXR100483" "HMR_8750" "RCR14129" "" 0 "" "" "HMR_8750" +"MAR08749" "" "H2CO3D2" "" "" "" "HMR_8749" "MNXR100483" "HMR_8749" "RCR14128" "" 1 "" "" "HMR_8749" +"MAR08750" "" "H2CO3D2m" "" "" "" "HMR_8750" "MNXR100483" "HMR_8750" "RCR14129" "" 1 "" "" "HMR_8750" "MAR08751" "R00132" "H2CO3Dm" "" "" "" "H2CO3Dm" "MNXR100482" "HMR_8751" "RCR14130" "" 0 "" "" "HMR_8751" "MAR08752" "" "PRDXl" "" "" "" "PRDXl" "MNXR103159" "HMR_8752" "RCR14131" "" 0 "RHEA:30692" "RHEA:30691" "HMR_8752" "MAR07741" "R01195" "" "" "" "" "HMR_7741" "MNXR99609" "HMR_7741" "RCR14753" "" 0 "" "" "HMR_7741" @@ -7191,7 +7191,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR08412" "" "O2Stn" "" "" "" "O2Stn" "MNXR102089" "HMR_8412" "RCR20749" "" 0 "" "" "HMR_8412" "MAR08447" "" "CYTK1" "" "" "" "CYTDtn" "MNXR97047" "HMR_8447" "RCR20750" "" 0 "" "" "HMR_8447" "MAR08476" "" "" "" "" "" "HMR_8476" "" "HMR_8476" "RCR21086" "2.A.57.1.4" 0 "" "" "HMR_8476" -"MAR08639" "" "" "" "" "" "HMR_8639" "" "HMR_8639" "RCR21087" "" 0 "" "" "HMR_8639" "MAR08789" "" "NMNtn" "" "" "" "NMNtn" "MNXR101972" "HMR_8789" "RCR20751" "" 0 "" "" "HMR_8789" "MAR08828" "" "PAIL_HStn" "" "" "" "PAIL_HStn" "MNXR102336" "HMR_8828" "RCR20319" "" 0 "" "" "HMR_8828" "MAR08837" "" "PAIL45P_HStn" "" "" "" "PAIL45P_HStn" "MNXR102332" "HMR_8837" "RCR21088" "" 0 "" "" "HMR_8837" @@ -9741,7 +9740,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR08970" "" "FRDPtcr" "" "" "" "FRDPtcr" "MNXR99646" "" "" "" 0 "" "" "FRDPtcr" "MAR08971" "" "G6PDH2c" "" "" "" "G6PDH2c" "" "" "" "" 0 "" "" "G6PDH2c" "MAR08972" "" "GLUPROASCT1" "" "" "" "GLUPROASCT1" "MNXR100286" "" "" "" 0 "" "" "GLUPROASCT1" -"MAR08973" "" "GNDc" "" "" "" "GNDc" "" "" "" "" 0 "" "" "GNDc" "MAR08974" "" "HYPTROXe" "" "" "" "HYPTROXe" "MNXR100764" "" "" "" 0 "" "" "HYPTROXe" "MAR08975" "" "INSK" "" "" "" "INSK" "MNXR100845" "" "" "" 0 "RHEA:21141" "RHEA:21140" "INSK" "MAR08976" "" "Kt3r" "" "" "" "KHte" "MNXR100939" "" "" "" 0 "" "" "KHte" @@ -13068,3 +13066,6 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx "MAR10131" "" "" "" "" "" "" "" "" "RCR90175" "" 0 "" "" "HMR_10131" "MAR10132" "" "" "" "" "" "" "" "" "RCR90179" "" 0 "" "" "HMR_10132" "MAR13083" "" "" "" "" "" "" "" "" "" "" 0 "" "" "HMR_10133" +"MAR13084" "" "" "" "" "" "" "" "" "" "" 0 "" "" "" +"MAR13085" "" "" "" "" "" "" "" "" "" "" 0 "" "" "" +"MAR13086" "" "" "" "" "" "" "" "" "" "" 0 "" "" ""