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README.md

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## SciML
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[SciML](https://github.com/SciML) is a collection of Julia libraries for open source scientific computing and machine learning. The centerpiece of SciML is [DifferentialEquations.jl](https://github.com/SciML/DifferentialEquations.jl), which provides a rich set of ordinary differential equations (ODE) solvers. One major peripheral component of SciML is [ModelingToolkit.jl](https://github.com/SciML/ModelingToolkit.jl). It is a modeling framework for high-performance symbolic-numeric computation in scientific computing and scientific machine learning. The core of ModelingToolkit.jl is an IR language to code the scientific problems of interest in a high level. Automatic code generation and differentiation allow for the generation of a usable model for the other components of SciML, such as DifferentialEquations.jl.
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[SciML](https://github.com/SciML) is a collection of Julia libraries for open source scientific computing and machine learning. The centerpiece of SciML is [DifferentialEquations.jl](https://github.com/SciML/DifferentialEquations.jl), which provides a rich set of ordinary differential equations (ODE) solvers. One major peripheral component of SciML is [ModelingToolkit.jl](https://github.com/SciML/ModelingToolkit.jl). It is a modeling framework for high-performance symbolic-numeric computation in scientific computing and scientific machine learning. The core of ModelingToolkit.jl is an IR language to code the scientific problems of interest at a high level. Automatic code generation and differentiation allow for the generation of a usable model for the other components of SciML, such as DifferentialEquations.jl.
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## Installation
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docs/src/index.md

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## SciML
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[SciML](https://github.com/SciML) is a collection of Julia libraries for open source scientific computing and machine learning. The centerpiece of SciML is [DifferentialEquations.jl](https://github.com/SciML/DifferentialEquations.jl), which provides a rich set of ordinary differential equations (ODE) solvers. One major peripheral component of SciML is [ModelingToolkit.jl](https://github.com/SciML/ModelingToolkit.jl). It is a modeling framework for high-performance symbolic-numeric computation in scientific computing and scientific machine learning. The core of ModelingToolkit.jl is an IR language to code the scientific problems of interest in a high level. Automatic code generation and differentiation allow for the generation of a usable model for the other components of SciML, such as DifferentialEquations.jl.
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[SciML](https://github.com/SciML) is a collection of Julia libraries for open source scientific computing and machine learning. The centerpiece of SciML is [DifferentialEquations.jl](https://github.com/SciML/DifferentialEquations.jl), which provides a rich set of ordinary differential equations (ODE) solvers. One major peripheral component of SciML is [ModelingToolkit.jl](https://github.com/SciML/ModelingToolkit.jl). It is a modeling framework for high-performance symbolic-numeric computation in scientific computing and scientific machine learning. The core of ModelingToolkit.jl is an IR language to code the scientific problems of interest at a high level. Automatic code generation and differentiation allow for the generation of a usable model for the other components of SciML, such as DifferentialEquations.jl.
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## Installation
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docs/src/tutorial.md

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# Tutorial
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The models directory contains few CellML model examples. Let's start with a simple one, the famous Lorenz equations!
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The models directory contains a few CellML model examples. Let's start with a simple one, the famous Lorenz equations!
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```Julia
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using CellMLToolkit
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prob = ODEProblem(ml, tspan)
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```
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Now, `ml` points to a `CellModel` struct that contains the details of the model and `prob` is an `ODEProblem` ready for integration. We can solve and visualize `prob` as
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Now, `ml` points to a `CellModel` struct that contains the details of the model, and `prob` is an `ODEProblem` ready for integration. We can solve and visualize `prob` as
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```Julia
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using DifferentialEquations, Plots
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![](assets/lorenz.png)
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Let's look at more complicated examples. The next one is the [ten Tusscher-Noble-Noble-Panfilov human left ventricular action potential model](https://journals.physiology.org/doi/full/10.1152/ajpheart.00794.2003). This is a mid-range electrophysiology model with 17 states variables and relatively good numerical stability.
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Let's look at more complicated examples. The next one is the [ten Tusscher-Noble-Noble-Panfilov human left ventricular action potential model](https://journals.physiology.org/doi/full/10.1152/ajpheart.00794.2003). This is a mid-range electrophysiology model with 17 state variables and relatively good numerical stability.
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```Julia
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ml = CellModel("models/tentusscher_noble_noble_panfilov_2004_a.cellml.xml")

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