diff --git a/preprocessor/pharmcat_vcf_preprocessor.py b/preprocessor/pharmcat_vcf_preprocessor.py index c894cc7a0..1ce77a0f0 100644 --- a/preprocessor/pharmcat_vcf_preprocessor.py +++ b/preprocessor/pharmcat_vcf_preprocessor.py @@ -155,7 +155,8 @@ for file in m_vcf_files: if preprocessor.is_gvcf_file(file): print('%s is a gVCF file, which is not currently supported.\n' - 'The PharmCAT VCF Preprocessor will support block gVCF in the future.' % str(file)) + 'See https://github.com/PharmGKB/PharmCAT/issues/79 for details.\n' + 'If this is not a gVCF file, use -G to bypass.' % str(file)) sys.exit(1) m_samples: List[str] = []