README.md

corewaeasy (DEPRECATED, it was included in GWADAMA as a part of the IO tools)

CoRe Watpy made easy.

Includes the class CoReManager which centralices all common operations in watpy.

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• Author: Miquel Llorens
• E-mail: [email protected]
• Last updated: 2024-02-14

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CoReManager

class CoReManager()

Manage easily usual tasks of CoRe-Watpy.

Ad-hoc manager to automate and make easier usual tasks in Watpy.

Attributes

cdb : watpy.coredb.coredb.CoRe_db Instance of CoRe_db from which everything is managed.

db_path : Path Folder where is or will be stored CoRe database. Refer to 'watpy.coredb.coredb.CoRe_db' for more details.

eos : set All EOS found available.

metadata : pd.DataFrame Metadata from all simulations in 'cdb' collected in a single DF.

downloaded : dict 3-Level dictionary containing the path to existing strains (saved as TXT files), their eccentricity and radius of extraction. Tree-format:

txt_files[simkey][run] = {
        'file': 'path/to/file.txt',
        'eccentricity': ecc,
        'r_extraction': rext
    }

ONLY 1 RUN PER SIMULATION FOR NOW