-
Notifications
You must be signed in to change notification settings - Fork 5
/
Copy path1.5.0-DEV-f014071421.log
368 lines (364 loc) · 19.1 KB
/
1.5.0-DEV-f014071421.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
Julia Version 1.5.0-DEV.232
Commit f014071421 (2020-02-03 21:36 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SortingAlgorithms ───────────────────── v0.3.1
Installed RecipesBase ─────────────────────────── v0.7.0
Installed FillArrays ──────────────────────────── v0.8.4
Installed TableTraits ─────────────────────────── v1.0.0
Installed Roots ───────────────────────────────── v0.8.4
Installed BinDeps ─────────────────────────────── v1.0.0
Installed StatsFuns ───────────────────────────── v0.9.3
Installed PiecewiseDeterministicMarkovProcesses ─ v0.0.1
Installed DocStringExtensions ─────────────────── v0.8.1
Installed QuadGK ──────────────────────────────── v2.3.1
Installed FunctionWrappers ────────────────────── v1.0.0
Installed Requires ────────────────────────────── v1.0.1
Installed Missings ────────────────────────────── v0.4.3
Installed Arpack_jll ──────────────────────────── v3.5.0+2
Installed Rmath ───────────────────────────────── v0.6.0
Installed StaticArrays ────────────────────────── v0.12.1
Installed MacroTools ──────────────────────────── v0.5.3
Installed RecursiveArrayTools ─────────────────── v2.0.5
Installed Reexport ────────────────────────────── v0.2.0
Installed ZygoteRules ─────────────────────────── v0.2.0
Installed ChainRulesCore ──────────────────────── v0.6.1
Installed IterativeSolvers ────────────────────── v0.8.1
Installed RecursiveFactorization ──────────────── v0.1.0
Installed SpecialFunctions ────────────────────── v0.9.0
Installed OpenBLAS_jll ────────────────────────── v0.3.7+5
Installed ArrayInterface ──────────────────────── v2.4.1
Installed StatsBase ───────────────────────────── v0.32.0
Installed Sundials ────────────────────────────── v3.8.1
Installed DiffEqBase ──────────────────────────── v6.13.2
Installed Distributions ───────────────────────── v0.22.4
Installed PDMats ──────────────────────────────── v0.9.11
Installed Arpack ──────────────────────────────── v0.4.0
Installed BinaryProvider ──────────────────────── v0.5.8
Installed DataAPI ─────────────────────────────── v1.1.0
Installed Parameters ──────────────────────────── v0.12.0
Installed DataStructures ──────────────────────── v0.17.9
Installed LSODA ───────────────────────────────── v0.6.1
Installed OrderedCollections ──────────────────── v1.1.0
Installed TreeViews ───────────────────────────── v0.3.0
Installed OpenSpecFun_jll ─────────────────────── v0.5.3+1
Installed URIParser ───────────────────────────── v0.4.0
Installed MuladdMacro ─────────────────────────── v0.2.2
Installed Compat ──────────────────────────────── v2.2.0
Installed IteratorInterfaceExtensions ─────────── v1.0.0
#=#=# ######################################################################## 100.0%
#=#=# 0.3%### 5.3%######## 12.3%################## 25.5%############################### 43.7%################################################ 66.7%############################################################### 88.2%######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
[86206cdf] + PiecewiseDeterministicMarkovProcesses v0.0.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[4fba245c] + ArrayInterface v2.4.1
[9e28174c] + BinDeps v1.0.0
[b99e7846] + BinaryProvider v0.5.8
[d360d2e6] + ChainRulesCore v0.6.1
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[2b5f629d] + DiffEqBase v6.13.2
[31c24e10] + Distributions v0.22.4
[ffbed154] + DocStringExtensions v0.8.1
[1a297f60] + FillArrays v0.8.4
[069b7b12] + FunctionWrappers v1.0.0
[42fd0dbc] + IterativeSolvers v0.8.1
[82899510] + IteratorInterfaceExtensions v1.0.0
[7f56f5a3] + LSODA v0.6.1
[1914dd2f] + MacroTools v0.5.3
[e1d29d7a] + Missings v0.4.3
[46d2c3a1] + MuladdMacro v0.2.2
[4536629a] + OpenBLAS_jll v0.3.7+5
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[d96e819e] + Parameters v0.12.0
[86206cdf] + PiecewiseDeterministicMarkovProcesses v0.0.1
[1fd47b50] + QuadGK v2.3.1
[3cdcf5f2] + RecipesBase v0.7.0
[731186ca] + RecursiveArrayTools v2.0.5
[f2c3362d] + RecursiveFactorization v0.1.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[79098fc4] + Rmath v0.6.0
[f2b01f46] + Roots v0.8.4
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[c3572dad] + Sundials v3.8.1
[3783bdb8] + TableTraits v1.0.0
[a2a6695c] + TreeViews v0.3.0
[30578b45] + URIParser v0.4.0
[700de1a5] + ZygoteRules v0.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath ───→ `~/.julia/packages/Rmath/BoBag/deps/build.log`
Building Sundials → `~/.julia/packages/Sundials/MllUG/deps/build.log`
Building LSODA ───→ `~/.julia/packages/LSODA/uaBH4/deps/build.log`
Testing PiecewiseDeterministicMarkovProcesses
Status `/tmp/jl_mgn5aG/Manifest.toml`
[79e6a3ab] Adapt v1.0.0
[ec485272] ArnoldiMethod v0.0.4
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+2
[4fba245c] ArrayInterface v2.4.1
[4c555306] ArrayLayouts v0.1.5
[aae01518] BandedMatrices v0.14.3
[9e28174c] BinDeps v1.0.0
[b99e7846] BinaryProvider v0.5.8
[764a87c0] BoundaryValueDiffEq v2.4.0
[d360d2e6] ChainRulesCore v0.6.1
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.9
[bcd4f6db] DelayDiffEq v5.20.0
[2b5f629d] DiffEqBase v6.13.2
[459566f4] DiffEqCallbacks v2.11.0
[5a0ffddc] DiffEqFinancial v2.2.1
[c894b116] DiffEqJump v6.5.0
[77a26b50] DiffEqNoiseProcess v3.8.0
[055956cb] DiffEqPhysics v3.4.0
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.0
[0c46a032] DifferentialEquations v6.10.1
[c619ae07] DimensionalPlotRecipes v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.22.4
[ffbed154] DocStringExtensions v0.8.1
[d4d017d3] ExponentialUtilities v1.6.0
[1a297f60] FillArrays v0.8.4
[6a86dc24] FiniteDiff v2.1.0
[f6369f11] ForwardDiff v0.10.9
[069b7b12] FunctionWrappers v1.0.0
[01680d73] GenericSVD v0.2.2
[d25df0c9] Inflate v0.1.1
[42fd0dbc] IterativeSolvers v0.8.1
[82899510] IteratorInterfaceExtensions v1.0.0
[7f56f5a3] LSODA v0.6.1
[093fc24a] LightGraphs v1.3.0
[d3d80556] LineSearches v7.0.1
[1914dd2f] MacroTools v0.5.3
[e1d29d7a] Missings v0.4.3
[46d2c3a1] MuladdMacro v0.2.2
[f9640e96] MultiScaleArrays v1.6.0
[d41bc354] NLSolversBase v7.6.1
[2774e3e8] NLsolve v4.3.0
[77ba4419] NaNMath v0.3.3
[4536629a] OpenBLAS_jll v0.3.7+5
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[bac558e1] OrderedCollections v1.1.0
[1dea7af3] OrdinaryDiffEq v5.28.1
[90014a1f] PDMats v0.9.11
[d96e819e] Parameters v0.12.0
[86206cdf] PiecewiseDeterministicMarkovProcesses v0.0.1
[e409e4f3] PoissonRandom v0.4.0
[1fd47b50] QuadGK v2.3.1
[e6cf234a] RandomNumbers v1.4.0
[3cdcf5f2] RecipesBase v0.7.0
[731186ca] RecursiveArrayTools v2.0.5
[f2c3362d] RecursiveFactorization v0.1.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[ae5879a3] ResettableStacks v1.0.0
[79098fc4] Rmath v0.6.0
[f2b01f46] Roots v0.8.4
[699a6c99] SimpleTraits v0.9.1
[a2af1166] SortingAlgorithms v0.3.1
[47a9eef4] SparseDiffTools v1.3.3
[276daf66] SpecialFunctions v0.9.0
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.3
[9672c7b4] SteadyStateDiffEq v1.5.0
[789caeaf] StochasticDiffEq v6.19.1
[c3572dad] Sundials v3.8.1
[3783bdb8] TableTraits v1.0.0
[a2a6695c] TreeViews v0.3.0
[30578b45] URIParser v0.4.0
[19fa3120] VertexSafeGraphs v0.1.1
[700de1a5] ZygoteRules v0.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[9abbd945] Profile
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
ERROR: LoadError: LoadError: LoadError: LoadError: UndefVarError: @get! not defined
Stacktrace:
[1] #macroexpand#38 at ./expr.jl:108 [inlined]
[2] macroexpand at ./expr.jl:107 [inlined]
[3] docm(::LineNumberNode, ::Module, ::Any, ::Any, ::Bool) at ./docs/Docs.jl:523 (repeats 2 times)
[4] @doc(::LineNumberNode, ::Module, ::String, ::Vararg{Any,N} where N) at ./boot.jl:463
[5] include(::Module, ::String) at ./Base.jl:377
[6] include(::String) at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/MacroTools.jl:1
[7] top-level scope at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/MacroTools.jl:11
[8] include(::Module, ::String) at ./Base.jl:377
[9] top-level scope at none:2
[10] eval at ./boot.jl:331 [inlined]
[11] eval(::Expr) at ./client.jl:449
[12] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/utils.jl:176
in expression starting at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/utils.jl:160
in expression starting at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/utils.jl:160
in expression starting at /home/pkgeval/.julia/packages/MacroTools/jYLA1/src/MacroTools.jl:11
ERROR: LoadError: LoadError: Failed to precompile MacroTools [1914dd2f-81c6-5fcd-8719-6d5c9610ff09] to /home/pkgeval/.julia/compiled/v1.5/MacroTools/38lnR_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] include(::String) at /home/pkgeval/.julia/packages/ZygoteRules/6nssF/src/ZygoteRules.jl:1
[8] top-level scope at /home/pkgeval/.julia/packages/ZygoteRules/6nssF/src/ZygoteRules.jl:13
[9] include(::Module, ::String) at ./Base.jl:377
[10] top-level scope at none:2
[11] eval at ./boot.jl:331 [inlined]
[12] eval(::Expr) at ./client.jl:449
[13] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/ZygoteRules/6nssF/src/adjoint.jl:1
in expression starting at /home/pkgeval/.julia/packages/ZygoteRules/6nssF/src/ZygoteRules.jl:13
ERROR: LoadError: Failed to precompile ZygoteRules [700de1a5-db45-46bc-99cf-38207098b444] to /home/pkgeval/.julia/compiled/v1.5/ZygoteRules/LmjSI_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/RecursiveArrayTools/cvf1t/src/RecursiveArrayTools.jl:5
ERROR: LoadError: Failed to precompile RecursiveArrayTools [731186ca-8d62-57ce-b412-fbd966d074cd] to /home/pkgeval/.julia/compiled/v1.5/RecursiveArrayTools/6B7tG_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/DiffEqBase/gTsoC/src/DiffEqBase.jl:3
ERROR: LoadError: Failed to precompile DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] to /home/pkgeval/.julia/compiled/v1.5/DiffEqBase/oaevG_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/LSODA/uaBH4/src/LSODA.jl:5
ERROR: LoadError: Failed to precompile LSODA [7f56f5a3-f504-529b-bc02-0b1fe5e64312] to /home/pkgeval/.julia/compiled/v1.5/LSODA/HNvAI_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/src/PiecewiseDeterministicMarkovProcesses.jl:3
ERROR: LoadError: Failed to precompile PiecewiseDeterministicMarkovProcesses [86206cdf-4603-54e0-bd58-22a2dcbf57aa] to /home/pkgeval/.julia/compiled/v1.5/PiecewiseDeterministicMarkovProcesses/JLVBa_NHHHN.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1272
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::String) at ./client.jl:439
[7] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/PiecewiseDeterministicMarkovProcesses/XHd2v/test/runtests.jl:1
ERROR: Package PiecewiseDeterministicMarkovProcesses errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:53
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1503
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:13