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1.5.0-DEV-f014071421.log
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Julia Version 1.5.0-DEV.232
Commit f014071421 (2020-02-03 21:36 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed ToeplitzMatrices ─────── v0.5.0
Installed SortingAlgorithms ────── v0.3.1
Installed DualNumbers ──────────── v0.6.2
Installed FillArrays ───────────── v0.5.0
Installed OffsetArrays ─────────── v0.11.4
Installed AbstractFFTs ─────────── v0.4.1
Installed NLSolversBase ────────── v7.6.1
Installed Calculus ─────────────── v0.5.1
Installed CommonSubexpressions ─── v0.2.0
Installed BlockArrays ──────────── v0.7.0
Installed EffectiveWaves ───────── v0.2.0
Installed RecipesBase ──────────── v0.7.0
Installed PositiveFactorizations ─ v0.2.3
Installed Nullables ────────────── v1.0.0
Installed InfiniteArrays ───────── v0.0.2
Installed BinDeps ──────────────── v0.8.10
Installed DomainSets ───────────── v0.0.1
Installed Missings ─────────────── v0.4.3
Installed StaticArrays ─────────── v0.12.1
Installed ForwardDiff ──────────── v0.10.9
Installed HierarchicalMatrices ─── v0.1.4
Installed FiniteDiff ───────────── v2.1.0
Installed ProgressMeter ────────── v1.2.0
Installed VersionParsing ───────── v1.2.0
Installed Requires ─────────────── v1.0.1
Installed SpecialFunctions ─────── v0.7.2
Installed BandedMatrices ───────── v0.7.1
Installed Reexport ─────────────── v0.2.0
Installed DiffRules ────────────── v0.0.10
Installed FastGaussQuadrature ──── v0.4.2
Installed BlockBandedMatrices ──── v0.2.0
Installed FastTransforms ───────── v0.5.0
Installed ArrayInterface ───────── v2.4.1
Installed DSP ──────────────────── v0.5.2
Installed JSON ─────────────────── v0.21.0
Installed FFTW ─────────────────── v0.3.0
Installed LowRankApprox ────────── v0.2.3
Installed StatsBase ────────────── v0.32.0
Installed Conda ────────────────── v1.3.0
Installed DiffResults ──────────── v1.0.2
Installed DataAPI ──────────────── v1.1.0
Installed Parsers ──────────────── v0.3.11
Installed Parameters ───────────── v0.12.0
Installed DataStructures ───────── v0.17.9
Installed LineSearches ─────────── v7.0.1
Installed BinaryProvider ───────── v0.5.8
Installed ApproxFun ────────────── v0.10.0
Installed Optim ────────────────── v0.18.1
Installed DiffEqDiffTools ──────── v0.14.0
Installed NaNMath ──────────────── v0.3.3
Installed IntervalSets ─────────── v0.3.2
Installed OrderedCollections ───── v1.1.0
Installed LazyArrays ───────────── v0.3.2
Installed Compat ───────────────── v2.2.0
Installed URIParser ────────────── v0.4.0
Installed Polynomials ──────────── v0.6.0
Updating `~/.julia/environments/v1.5/Project.toml`
[37e8709b] + EffectiveWaves v0.2.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[621f4979] + AbstractFFTs v0.4.1
[28f2ccd6] + ApproxFun v0.10.0
[4fba245c] + ArrayInterface v2.4.1
[aae01518] + BandedMatrices v0.7.1
[9e28174c] + BinDeps v0.8.10
[b99e7846] + BinaryProvider v0.5.8
[8e7c35d0] + BlockArrays v0.7.0
[ffab5731] + BlockBandedMatrices v0.2.0
[49dc2e85] + Calculus v0.5.1
[bbf7d656] + CommonSubexpressions v0.2.0
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[717857b8] + DSP v0.5.2
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[01453d9d] + DiffEqDiffTools v0.14.0
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v0.0.10
[5b8099bc] + DomainSets v0.0.1
[fa6b7ba4] + DualNumbers v0.6.2
[37e8709b] + EffectiveWaves v0.2.0
[7a1cc6ca] + FFTW v0.3.0
[442a2c76] + FastGaussQuadrature v0.4.2
[057dd010] + FastTransforms v0.5.0
[1a297f60] + FillArrays v0.5.0
[6a86dc24] + FiniteDiff v2.1.0
[f6369f11] + ForwardDiff v0.10.9
[7c893195] + HierarchicalMatrices v0.1.4
[4858937d] + InfiniteArrays v0.0.2
[8197267c] + IntervalSets v0.3.2
[682c06a0] + JSON v0.21.0
[5078a376] + LazyArrays v0.3.2
[d3d80556] + LineSearches v7.0.1
[898213cb] + LowRankApprox v0.2.3
[e1d29d7a] + Missings v0.4.3
[d41bc354] + NLSolversBase v7.6.1
[77ba4419] + NaNMath v0.3.3
[4d1e1d77] + Nullables v1.0.0
[6fe1bfb0] + OffsetArrays v0.11.4
[429524aa] + Optim v0.18.1
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.11
[f27b6e38] + Polynomials v0.6.0
[85a6dd25] + PositiveFactorizations v0.2.3
[92933f4c] + ProgressMeter v1.2.0
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.7.2
[90137ffa] + StaticArrays v0.12.1
[2913bbd2] + StatsBase v0.32.0
[c751599d] + ToeplitzMatrices v0.5.0
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building SpecialFunctions → `~/.julia/packages/SpecialFunctions/fvheQ/deps/build.log`
Building Conda ───────────→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Building FFTW ────────────→ `~/.julia/packages/FFTW/2okGQ/deps/build.log`
Testing EffectiveWaves
Status `/tmp/jl_j9noSc/Manifest.toml`
[621f4979] AbstractFFTs v0.4.1
[28f2ccd6] ApproxFun v0.10.0
[4fba245c] ArrayInterface v2.4.1
[aae01518] BandedMatrices v0.7.1
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.8
[8e7c35d0] BlockArrays v0.7.0
[ffab5731] BlockBandedMatrices v0.2.0
[49dc2e85] Calculus v0.5.1
[bbf7d656] CommonSubexpressions v0.2.0
[34da2185] Compat v2.2.0
[8f4d0f93] Conda v1.3.0
[717857b8] DSP v0.5.2
[9a962f9c] DataAPI v1.1.0
[864edb3b] DataStructures v0.17.9
[01453d9d] DiffEqDiffTools v0.14.0
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v0.0.10
[5b8099bc] DomainSets v0.0.1
[fa6b7ba4] DualNumbers v0.6.2
[37e8709b] EffectiveWaves v0.2.0
[7a1cc6ca] FFTW v0.3.0
[442a2c76] FastGaussQuadrature v0.4.2
[057dd010] FastTransforms v0.5.0
[1a297f60] FillArrays v0.5.0
[6a86dc24] FiniteDiff v2.1.0
[f6369f11] ForwardDiff v0.10.9
[7c893195] HierarchicalMatrices v0.1.4
[4858937d] InfiniteArrays v0.0.2
[8197267c] IntervalSets v0.3.2
[682c06a0] JSON v0.21.0
[5078a376] LazyArrays v0.3.2
[d3d80556] LineSearches v7.0.1
[898213cb] LowRankApprox v0.2.3
[e1d29d7a] Missings v0.4.3
[d41bc354] NLSolversBase v7.6.1
[77ba4419] NaNMath v0.3.3
[4d1e1d77] Nullables v1.0.0
[6fe1bfb0] OffsetArrays v0.11.4
[429524aa] Optim v0.18.1
[bac558e1] OrderedCollections v1.1.0
[d96e819e] Parameters v0.12.0
[69de0a69] Parsers v0.3.11
[f27b6e38] Polynomials v0.6.0
[85a6dd25] PositiveFactorizations v0.2.3
[92933f4c] ProgressMeter v1.2.0
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.7.2
[90137ffa] StaticArrays v0.12.1
[2913bbd2] StatsBase v0.32.0
[c751599d] ToeplitzMatrices v0.5.0
[30578b45] URIParser v0.4.0
[81def892] VersionParsing v1.2.0
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[9abbd945] Profile
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
WARNING: Method definition dot(Any, Any, Any) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.5/LinearAlgebra/src/generic.jl:924 overwritten in module Optim at /home/pkgeval/.julia/packages/Optim/Agd3B/src/multivariate/precon.jl:23.
** incremental compilation may be fatally broken for this module **
WARNING: Method definition dot(Any, Any, Any) in module LinearAlgebra at /workspace/srcdir/usr/share/julia/stdlib/v1.5/LinearAlgebra/src/generic.jl:924 overwritten in module Optim at /home/pkgeval/.julia/packages/Optim/Agd3B/src/multivariate/precon.jl:23.
** incremental compilation may be fatally broken for this module **
WARNING: could not import LinearAlgebra.has_offset_axes into BandedMatrices
┌ Warning: the volume fraction 40.0% is too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/low_volfrac.jl:16
┌ Warning: the volume fraction 40.0% is too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/low_volfrac.jl:58
┌ Warning: the volume fraction 40.0% is a bit too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/alternative_wavenumbers.jl:12
┌ Warning: the volume fraction 40.0% is too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/low_volfrac.jl:16
┌ Warning: the volume fraction 40.0% is too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/low_volfrac.jl:58
┌ Warning: the volume fraction 40.0% is a bit too high, expect a relative error of approximately 6.0%
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/alternative_wavenumbers.jl:12
Test Summary: | Pass Total
Examples from: Reflection from multi-species.., Proc.R.Soc.(2018) | 1 1
Test Summary: | Pass Total
Particle types and constructors | 5 5
Test Summary: | Pass Total
strong scatterers and low frequency | 3 3
Test Summary: | Pass Total
high frequency effective | 3 3
Test Summary: | Pass Total
large volume fraction and low frequency | 3 3
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 0.0005192211730265132, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 0.0014965410741584718, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 1.734581027066283e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
Test Summary: | Pass Total
weak scatterers | 9 9
Test Summary: | Pass Total
Mesh and path methods for wavenumbers | 1 1
┌ Warning: Integration scheme fish unknown, will use trapezoidal
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/numerical_integration.jl:17
Test Summary: | Pass Total
test different numerical integration methods | 3 3
┌ Warning: The effective wavenumber gave an eigenvalue 0.027719456567591522, which is larger than the tol = 4.0e-7. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
Test Summary: | Pass Total
Integrated reflection | 10 10
Test Summary: | Pass Total
Compare integrand values against brute force Mathematica result | 1 1
┌ Warning: The effective wavenumber gave an eigenvalue 2.0759670982032704e-7, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The effective wavenumber gave an eigenvalue 4.747659559988259e-6, which is larger than the tol = 4.0e-8. Note the secular equation is determined by the chosen medium and species.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/effective_waves/effective_waves.jl:75
┌ Warning: The mesh max_size = 100 which was too small for tol = 1.0e-9. Will make a smaller and coarser mesh.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/average_waves.jl:159
Test Summary: | Pass Total
match wave low volfrac | 6 6
┌ Warning: The mesh max_size = 60 which was too small for tol = 1.0e-8. Will shrink meshed region.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/average_waves.jl:154
┌ Warning: The mesh max_size = 60 which was too small for tol = 1.0e-8. Will shrink meshed region.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/average_waves.jl:154
Test Summary: | Pass Total
match wave low frequency | 6 6
┌ Warning: The mesh max_size = 80 which was too small for tol = 1.0e-8. Will make a smaller and coarser mesh.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/average_waves.jl:159
┌ Warning: The mesh max_size = 700 which was too small for tol = 1.0e-8. Will make a smaller and coarser mesh.
└ @ EffectiveWaves ~/.julia/packages/EffectiveWaves/e97m8/src/average_waves/average_waves.jl:159
Test Summary: | Pass Total
match purely numerical solution | 5 5
Testing EffectiveWaves tests passed