diff --git a/python/parpe/hdf5_pe_input.py b/python/parpe/hdf5_pe_input.py index 5a704f8c..fcf62af7 100644 --- a/python/parpe/hdf5_pe_input.py +++ b/python/parpe/hdf5_pe_input.py @@ -975,19 +975,6 @@ def _write_amici_options(self) -> None: # set amici model options g.attrs['nmaxevent'] = 10 - num_model_parameters = \ - self.f['/parameters/modelParameterNames'].shape[0] - - # parameter indices w.r.t. which to compute sensitivities - # default: all - # TODO: compute only for estimated parameters - # that means, this may have to be condition-specific - # https://github.com/ICB-DCM/parPE/issues/380 - self.f.require_dataset( - '/amiciOptions/sens_ind', shape=(num_model_parameters,), - dtype="