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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[Unreleased]

Changed

Fixed

Removed

Added

[5.7.1] - 2025-01-22

Fixed

  • Fixed GEOSpyD module on GMAO Desktops

[5.7.0] - 2025-01-16

Changed

  • Update to Baselibs 8.9.0
    • ESMF 8.8.0
    • NCO 5.3.1
    • CDO 2.5.0
    • curl 8.11.1
  • Add support for flang-new
  • Turn off ESMPy building. It's not working and maybe we don't want to build from source anyway as it's easier through mamba

[5.6.0] - 2025-01-06

Changed

  • Update to MPT 2.30 Baselibs at NAS. This is due to NAS updating the mpi-hpe/mpt module to mpi-hpe/mpt.2.30. While this does not break GEOS, CMake throws more errors due to differences in MPT that built Baselibs vs MPT that would build GEOS.

[5.5.1] - 2024-11-06

Changed

  • Make g5_modules executable again

[5.5.0] - 2024-10-22

Changed

  • Update to Baselibs 8.7.0
    • ESMF 8.7.0
    • FMS 2024.03
    • HDF5 1.14.5
    • curl 8.10.1
    • NCO 5.2.8
    • CDO 2.4.4
    • GSL 2.8
    • jpeg 9f
    • Various build fixes
  • Move to non-Anaconda GEOSpyD

[5.4.1] - 2024-09-18

Fixed

  • Just do not append Baselibs LD_LIBRARY_PATH at NAS. Seems to break parallel_build.csh

[5.4.0] - 2024-09-13

Changed

  • Updated the default processors for parallel_build.csh to Milan at NCCS and Rome at NAS

[5.3.1] - 2024-09-09

Fixed

  • Fix issue between g5_modules and csh at NAS
    • Changed order when setting LD_LIBRARY_PATH to avoid issues with csh and tclsh

[5.3.0] - 2024-07-22

Changed

  • Update to Baselibs 8.5.0
    • GFE v1.16.0
      • gFTL v1.14.0
      • gFTL-shared v1.9.0
      • fArgParse v1.8.0
      • pFUnit v4.10.0
      • yaFyaml v1.4.0

[5.2.0] - 2024-07-05

Changed

  • Update to Baselibs 8.4.0
    • Restore FMS build (was erroneously removed in 8.2.0)
    • Fixes for MPT and using icx/icpx at NAS
  • Move to use Intel ifort 2021.13 on SLES 15 at NCCS, at NAS, and on GMAO Desktops

[5.1.0] - 2024-07-05

Changed

  • Update to Baselibs 8.3.1
    • ESMF 8.6.1
    • FMS 2024.01.02
    • curl 8.8.0
    • NCO 5.2.6
    • Various make system updates for other compilers and machines
  • Move to use Intel ifort 2021.12 on SLES 15 at NCCS, at NAS, and on GMAO Desktops
  • Update to GEOSpyD Min24.0.0 for Python3

[5.0.0] - 2024-05-20

Changed

  • Update to Baselibs 8.0.2
    • Has FMS 2024.01 and libyaml 0.2.5
  • Move to use Intel MPI 2021.12 on SLES 15 at NCCS
  • Add support for Milan processors at NAS

Added

  • Added yaml linter

[4.29.0] - 2024-04-25

Changed

  • Update to Baselibs 7.24.0
    • ESMF v8.6.1b04
    • NCO 5.2.4
    • curl 8.7.1
    • Removed udunits2_fortran and FLAP (no longer needed)

[4.28.1] - 2024-04-03

Fixed

  • Move back to Open MPI 4 on SLES15 at NCCS
    • Testing showed crashes at C360 and under various other circumstances

[4.28.0] - 2024-04-02

Changed

  • Update to Baselibs 7.23.0
    • Reverted to HDF5 1.10.11 (odd issues on NCCS machines with HDF5 1.14, investigating)
    • GFE v1.15.0
      • gFTL v1.13.0
      • gFTL-shared v1.8.0
      • fArgParse v1.7.0
      • pFUnit v4.9.0
      • yaFyaml v1.3.0
      • pFlogger v1.14.0
    • NCO 5.2.2
    • Various other updates
  • Move to use Open MPI 5 by default on SLES15 at NCCS

Fixed

  • Testing on GMAO Desktops showed that LD_LIBRARY_PATH could not be altered by g5_modules. So this is disabled on GMAO Desktops

[4.27.0] - 2024-03-04

Changed

  • Move to use GEOSpyD Min23.5.2 on GMAO desktops

[4.26.0] - 2024-02-22

Changed

  • Move to Baselibs 7.18.1
    • HDF5 1.14.3
    • curl 8.6.0
    • zlib 1.3.1

[4.25.1] - 2024-01-24

Fixed

  • Fix incorrect Open MPI module at NCCS SLES15

[4.25.0] - 2024-01-22

Changed

  • Moved to Baselibs 7.17.1
    • Fix for NAG and ESMF 8.6.0
  • Update g5_modules to use GCC 11.4 as the backing C compiler on SLES 15 at NCCS
    • This was done as it was discovered that xgboost was not building on SLES15 with Intel when using GCC 12. Until xgboost can be updated to a newer version, this is the workaround.

[4.24.0] - 2023-12-01

Changed

  • Moved to Baselibs 7.17.0
    • GFE v1.12.0
      • gFTL v1.11.0
      • gFTL-shared v1.7.0
      • fArgParse v1.6.0
      • pFUnit v4.8.0
      • yaFyaml v1.2.0
      • pFlogger v1.11.0

[4.23.0] - 2023-11-30

Changed

  • Moved to Baselibs 7.16.0
    • ESMF v8.6.0
    • NCO 5.1.9
    • CDO 2.3.0
  • Move to Open MPI 4.1.6 with Intel on SLES 15 at NCCS.

[4.22.0] - 2023-11-21

Changed

  • Move back to Open MPI 4.1.5 with Intel on SLES 15 on NCCS. This avoids a bug between GEOS' Intel debugging flags and MPI_Init with Open MPI 5.0.0 (see open-mpi/ompi#12113)

[4.21.0] - 2023-11-20

Changed

  • Move to Open MPI 5.0.0 on SLES15 at NCCS
  • Moved to Baselibs 7.15.1
    • zlib 1.3
    • curl 8.4.0
    • HDF4 4.2.16-2
    • HDF5 1.10.11
    • nco 5.1.8
    • CDO 2.2.2
    • udunits2 2.2.28
    • fortran_udunits2 v1.0.0-rc.2 (GMAO-SI-Team fork)

Added

  • g5_modules now exports UDUNITS2_XML_PATH

[4.20.6] - 2023-10-30

Fixed

  • Fixed issue with clean option

[4.20.5] - 2023-10-26

Fixed

  • Fix issue with passing in build and install dirs

[4.20.4] - 2023-10-25

Fixed

  • Fixed breakage of debug, aggressive and many many other options

[4.20.3] - 2023-10-24

Fixed

  • Fixed issue with OS versioning when inside SLURM (has to be detected differently)

[4.20.2] - 2023-10-23

Fixed

  • Append -SLES12 or -SLES15 on the build and install directories at NCCS when using build.csh to make it clear to users

[4.20.1] - 2023-10-23

Fixed

  • Fixed build.csh for using Milan at NCCS

[4.20.0] - 2023-10-14

Added

  • Added support for Milan at NCCS
    • Uses Open MPI 4.1.5 on SCU17 rather than Intel MPI due to issues with Intel MPI

[4.19.0] - 2023-07-27

Changed

  • Moved to Baselibs 7.14.0
    • ESMF v8.5.0
    • GFE v1.11.0
      • gFTL-shared v1.6.1
      • pFUnit v4.7.3
    • curl 8.2.1
    • NCO 5.1.7
    • CDO 2.2.1

[4.18.0] - 2023-07-13

Changed

  • Removed Haswell as build node option at NCCS (no longer available)
  • Added an "any" option for the build node at NCCS which will submit to any available node type
    • At NCCS with GNU, Cascade Lake is forced as Open MPI is built only for Infiniband

[4.17.0] - 2023-05-25

Changed

  • Moved to Baselibs 7.13.0
    • esmf v8.5.0b22
    • curl 8.1.1
    • HDF5 1.10.10
    • netCDF-C 4.9.2
    • netCDF-Fortran 4.6.1
    • CDO 2.2.0

[4.16.1] - 2023-05-24

Fixed

  • Fixed issue with tmpdir at NAS

[4.16.0] - 2023-05-18

Changed

  • Updated to use MPT 2.28 at NAS per their recommendation for running on new TOSS4 nodes
    • This is done through the mpi-hpt/mpt module which resolves to mpi-hpe/mpt.2.28_25Apr23_rhel87

[4.15.0] - 2023-04-19

Changed

  • Moved to Baselibs 7.12.0
    • GFE v1.10.0
    • curl 8.0.1
    • NCO 5.1.5

[4.14.0] - 2023-03-29

Removed

  • Removed the -hydrostatic and non-hydrostatic options from build.csh as they are no longer needed as GEOS now builds both by default

[4.13.0] - 2023-03-17

Added

  • Add -wait option for waiting for batch jobs

[4.12.0] - 2023-03-08

Changed

  • Moved to Baselibs 7.11.0
    • ESMF v8.5.0b18

[4.11.0] - 2023-03-03

Changed

  • Moved to Baselibs 7.10.0
    • GFE v1.9.0
    • curl v7.88.1

[4.10.0] - 2023-01-26

Changed

  • Moved to Baselibs 7.9.0
    • ESMF v8.5.0b13
      • NOTE: This is a non-zero-diff change for GEOSgcm to precision changes in grid generation.

[4.9.0] - 2023-01-26

Changed

  • Moved to Baselibs 7.8.0
    • curl 7.87.0
    • NCO 5.1.4
    • CDO 2.1.1
      • NOTE: CDO now requires C++17 so this means if you are building with Intel C++ (Classic), you should use GCC 11.1 or higher as the backing GCC compiler per the Intel docs
  • Move to use GCC 11 at NCCS and NAS as needed above
  • Moved to use GitHub Actions for label enforcement

[4.8.0] - 2022-11-29

Changed

  • Moved to Baselibs 7.7.0
    • Updated
      • GFE v1.8.0
        • fArgParse v1.4.1
        • pFUnit v4.6.1

[4.7.0] - 2022-11-09

Changed

  • Moved to Baselibs 7.6.0
    • Updated
      • ESMF v8.4.0
      • zlib 1.2.13
      • curl 7.86.0
      • netCDF-C 4.9.0
      • netCDF-Fortran 4.6.0
      • NCO 5.1.1
      • CDO 2.1.0

[4.6.0] - 2022-11-02

Added

  • Add ability to pass in arbitrary CMake options to build.csh

[4.5.0] - 2022-10-25

Added

  • Added -gmi_mechanism option to build.csh for use with multiple GMI mechanism

[4.4.0] - 2022-08-26

Added

  • Add support for TOSS4 at NAS in g5_modules

[4.3.0] - 2022-08-19

Changed

  • Update to Intel 2022.1

[4.2.0] - 2022-07-01

Changed

  • Moved to Baselibs 7.5.0
    • Updated
      • GFE v1.4.0

[4.1.0] - 2022-06-15

Changed

  • Moved to Baselibs 7.3.1
    • Added
      • xgboost v1.6.0
    • Updated
      • ESMF v8.3.0
      • GFE v1.3.1
      • HDF5 1.10.9
      • curl 7.83.1
      • HDF5 1.10.9
      • NCO 5.0.7
      • CDO 2.0.5
  • Added Arm64 section to g5_modules

Added

  • Added .editorconfig file

[4.0.0] - 2022-04-21

Changed

  • Update to Baselibs v7.0.0
    • NOTE: This is a major tick because the yaFyaml in Baselibs 7 is incompatible with code that used yaFyaml in Baselibs 6. This is MAPL for GEOS. Upcoming code changes will require the use of these new yaFyaml interfaces

[3.13.0] - 2022-03-17

Changed

  • Change build.csh to only have clean or no clean options. The clean option now always does a full remove-build-and-install followed by a cmake.

[3.12.0] - 2022-03-09

Changed

  • Update to Baselibs 6.2.13
  • Move to have both Python2 and Python3 loaded at the same time

[3.11.0] - 2022-01-24

Removed

  • Removed support for SLES 12 and SLES 15 at NAS

Changed

  • Changed dates in CHANGELOG to conform to ISO 8601

[3.10.0] - 2021-12-21

Changed

  • Moved the default walltime at NAS to 1:30:00 due to observed slowness

[3.9.0] - 2021-12-20

Changed

  • Updated the Rome code in build.csh to not use SLES15

[3.8.0] - 2021-12-16

Changed

  • Update to Intel 2021.3
    • Note: This is non-zero-diff for GEOSgcm vs Intel 2021.2

[3.7.0] - 2021-12-06

Added

  • Add build.csh option -no-tar to turn off source tarfile generation (aka run CMake with -DINSTALL_SOURCE_TARFILE=OFF)

[3.6.0] - 2021-11-03

Changes

  • Per NAS advice, use MPT 2.25 on TOSS nodes

[3.5.1] - 2021-11-03

Fixed

  • Added Rome compute nodes (and tfe) to build.csh

[3.5.0] - 2021-10-26

Changed

  • Update to Baselibs 6.2.8

[3.4.1] - 2021-10-15

Fixed

  • When running on Cascade Lake nodes at NCCS, pass in --ntasks-per-node=45. Note that this script will never actually run make -j48 and indeed only asks SLURM for 10 tasks, but this will suppress a loud warning.

Added

  • Add CMake option to install source tarfile by default in build.csh

[3.4.0] - 2021-10-01

Changed

  • Update license to Apache
  • Cascade Lake at NCCS Support
    • Update to Intel 2021.2 compiler and MPI
    • Update to Baselibs 6.2.7
    • Add cas to build.csh

Added

  • Added Changelog enforcer

[3.3.1] - 2021-08-27

Added

  • Add -rom option to build script

[3.3.0] - 2021-06-08

Changed

  • Update to Baselibs 6.2.4 (for GFE CMake Namespace)
    • NOTE: This should be used in conjunction with ESMA_cmake v3.5.0

[3.2.2] - 2021-05-26

Changed

  • Updates for different mepo styles

[3.2.1] - 2021-04-16

Added

  • Add XTRAMODS2LOAD to g5_modules

[3.2.0] - 2021-04-05

Changed

  • Move to ESMF 8.1.0 (Baselibs 6.1.0)

[3.1.4] - 2021-04-02

Added

  • Add option for non-hydrostatic build

[3.1.3] - 2021-01-05

Changed

  • Update to Baselibs 6.0.27
    • This release updates to Baselibs 6.0.27 which is a minor update to the current 6.0.22. The differences were mainly in the build system, though an important update is the yaFyaml for some work being done in MAPL.

[3.1.2] - 2020-12-10

Added

  • Add hidden aggressive CMAKE_BUILD_TYPE

[3.1.1] - 2020-11-23

Removed

  • As we remove support for manage_externals, remove the reference in build.csh. No change to actual scripting.

[3.1.0] - 2020-11-17

Changed

  • Update to Intel 19.1.3 and Baselibs 6.0.22
    • This release updates from Intel 19.1.2 to 19.1.3. This is zero-diff in all testing save for MOM6 (which was tested by @yvikhlya said is not wrong, just different).

[3.0.1] - 2020-10-14

Changed

  • Reduce number of make jobs with build.csh

[3.0.0] - 2020-09-23

Changed

  • This is a major release of ESMA_env. Note that with these changes SLES 11 Support at NCCS is Removed

    Changes

    • ESMA Baselibs 6.0.16
    • Use a new Python Stack: GEOSpyD/Min4.8.3_py2.7
    • Update compilers and MPI stacks
      • NCCS
        • Intel Fortran 19.1.2
        • Intel MPI 19.1.2
      • NAS
        • Intel Fortran 2020.2.254 (aka 19.1.2)
        • MPT 2.17 (same as before)
      • GMAO Desktop
        • Intel Fortran 19.1.2
        • Open MPI 4.0.4
    • Remove the NCCS/ directory as it was out-of-date
    • Add -gnu flag to build.csh for easier building with GCC at NAS

    Baselibs Changes

    The change to Baselibs 6.0.16 from 6.0.13 involves the following:

    Library 6.0.13 6.0.16
    cURL 7.70.0 7.72.0
    NCO 4.9.1 4.9.3
    pFUnit 4.1.8 4.1.12
    gFTL 1.2.5 1.2.7
    fArgParse 0.9.5 1.0.1
    pFlogger 1.4.2 1.4.5
    yaFyaml 0.3.3 0.4.1

[2.1.6] - 2020-06-25

Added

  • This release adds a new file, BUILD_MODULES.rc, which will contain the environment modules/Lua modules used during building (if environment/Lua modules are found).

[2.1.5] - 2020-05-27

Changed

  • Update to Baselibs 6.0.13

    • This update moves ESMA_env to use Baselibs 6.0.13. Testing has been zero-diff.

    Changes in this Baselibs include:

    Updates

    • ESMF 8.0.1
    • gFTL-shared v1.0.7
    • pFUnit v4.1.7
    • pFlogger v1.4.2
    • fArgParse v0.9.5
    • yaFyaml v0.3.3

    Fixed

    • Fixes for GCC 10
      • Added patch for netcdf issue with GCC 10
      • Added flag for HDF4 when using GCC 10
      • Need to pass in extra flags to ESMF when using GCC 10
    • Fix for detection for --enable-dap with netcdf

[2.1.4] - 2020-05-18

Added

  • Add g5_modules.zsh

[2.1.3] - 2020-05-04

Changed

  • Update to Baselibs 6.0.12

[2.1.2] - 2020-04-27

Fixed

  • Fix for bug at NAS

Added

  • Add -nocmake option for scripting

[2.1.1] - 2020-04-20

Changed

  • Update to Baselibs 6.0.11

[2.1.0] - 2020-04-15

Changed

  • Release of MAPL 2.1 Compatible Environment

    • This release mainly moves to use Baselibs 6.0.10 which has new and update libraries needed for MAPL 2.1. The differences between 6.0.4 and 6.0.10 are:
    Library 6.0.4 6.0.10
    cURL 7.67.0 7.69.1
    HDF4 4.2.14 4.2.15
    pFUnit 4.1.5 4.1.7
    gFTL 1.2.2 1.2.5
    gFTL-shared 1.0.2 1.0.5
    fArgParse 0.9.2 0.9.3
    pFlogger 1.3.5
    yaFyaml 0.3.1
    • Also, NAS installed 18.0.5 so this matches what is used at NCCS.

[2.0.4] - 2020-03-11

Fixed

  • Fix usage statement

[2.0.3] - 2020-02-26

Added

  • Add Skylake Build capability at NCCS

[2.0.2] - 2020-02-26

Changed

  • Use Intel MPI 19.1 on SLES 12

[2.0.1] - 2020-02-21

Changed

  • Combined SLES11 + SLES12 g5_modules

[2.0.0] - 2020-02-10

Changed

  • Release of MAPL 2.0 Compatible Environment
    • This release of ESMA_env is the version compatible with MAPL 2.0. Changes include:
      • Use ESMA-Baselibs 6.0.4
      • Move to GEOSpyD 2019.10 as Python stack
      • NCCS
        • Move to Intel 18.0.5
        • Move to Intel MPI 18.0.5
      • NAS
        • Move to Intel 2019.3.199
          • NAS does not have Intel MPI 18.0.5 installed
      • GMAO Desktops
        • Move to Intel 18.0.5
        • Move to Open MPI 4.0.0

[1.4.1] - 2020-01-07

Changed

  • Use Ops build of Baselibs 5.1.7 at NCCS

[1.4.0] - 2019-Sep-26

Added

  • Add ability to specify directories and fix queues

[1.3.3] - 2019-Sep-10

Fixed

  • Source GEOSenv after SIVO-PyD
    • This is a small change due to the structure of MOM6. The libcurl in SIVO-PyD was interfering with git's ability to do a submodule clone in MOM6 (no support for https). But, if GEOSenv is loaded after SIVO-PyD, it seems to fix this issue by letting git's libcurl (built by Bhat) to win and that seems to work.

[1.3.2] - 2019-08-13

Fixed

  • Detect CPU count on macOS correctly
    • The build.csh script was assuming /proc/cpuinfo existed on all systems. macOS does not have it.

[1.3.1] - 2019-07-25

Changed

  • Enable additional parallelism in build script

[1.3.0] - 2019-07-24

Changed

  • Revert Python back to SIVO-PyD

[1.2.2] - 2019-07-23

Changed

  • Change location of SI Team modulefiles on NCCS

[1.2.1] - 2019-07-23

Changed

  • At build time, the ESMA_env will now create two files CMAKE_RELEASE.rc and GIT_VERSION.rc that will have information on what versions of CMake and Git built this install.

[1.2.0] - 2019-07-18

Changed

  • To not duplicate massive amounts of code across major GEOS-ESM fixtures, we move the bulk of parallel_build.csh to this repo in the name build.csh. This is called by a small stub in fixtures.

Added

  • Also move SITE.rc.in and BASEDIR.rc.in from fixture to here.

[1.1.2] - 2019-07-08

Changed

  • This moves installation of g5_modules etc. from the fixture to this repo

[1.1.1] - 2019-07-05

Fixed

  • This was a bad copy-and-paste. Correct the basedir to point to the one for MPT

[1.1.0] - 2019-07-05

Added

  • Due to the sheer number of g5_modules references in GEOS, for now restore this script

[1.0.0] - 2019-07-03

Added

  • Initial release for GEOS