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@ARTICLE{Tso2021-vv,
title     = "Targeted {High-Resolution} Taxonomic Identification of
             Bifidobacterium longum subsp. infantis Using Human Milk
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author    = "Tso, Lauren and Bonham, Kevin S and Fishbein, Alyssa and
             Rowland, Sophie and Klepac-Ceraj, Vanja",
journal   = "Nutrients",
publisher = "Multidisciplinary Digital Publishing Institute",
volume    =  13,
number    =  8,
pages     = "2833",
month     =  aug,
year      =  2021,
url       = "https://www.mdpi.com/2072-6643/13/8/2833",
file      = "All Papers/T/Tso et al. 2021 - Targeted High-Resolution Taxonomic Identification of B ... m subsp. infantis Using Human Milk Oligosaccharide Metabolizing Genes.pdf",
language  = "en",
doi       = "10.3390/nu13082833"
}

@ARTICLE{Lewis2021-be,
title     = "Family {SES} Is Associated with the Gut Microbiome in Infants
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author    = "Lewis, Candace R and Bonham, Kevin S and McCann, Shelley Hoeft
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url       = "https://www.mdpi.com/2076-2607/9/8/1608",
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language  = "en",
doi       = "10.3390/microorganisms9081608"
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@ARTICLE{Peterson2021-mr,
title    = "Comparative Analysis of {16S} {rRNA} Gene and Metagenome
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author   = "Peterson, Danielle and Bonham, Kevin S and Rowland, Sophie and
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file     = "All Papers/P/Peterson et al. 2021 - Comparative Analysis of 16S rRNA Gene and Metagenome Sequencing in Pediatric Gut Microbiomes.pdf",
keywords = "16S rRNA gene; amplicon sequencing; gut microbiome; metagenome;
            pediatric cohort; sequencing depth",
language = "en",
issn     = "1664-302X",
pmid     = "34335499",
doi      = "10.3389/fmicb.2021.670336",
pmc      = "PMC8320171"
}

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@misc{roesch2021julia,
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year={2021},
eprint={2109.09973},
archivePrefix={arXiv},
primaryClass={q-bio.QM}
}


@ARTICLE{Bezanson2017-ud,
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year      = {2018},
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@article{DanischKrumbiegel2021,
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@ARTICLE{Beghini2021-xy,
title    = "Integrating taxonomic, functional, and strain-level profiling of
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author   = "Beghini, Francesco and McIver, Lauren J and Blanco-M{\'\i}guez,
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keywords = "computational analysis; computational biology; human; infectious
            disease; metagenomics; microbial genomics; microbiology;
            microbiome; systems biology",
language = "en",
issn     = "2050-084X",
pmid     = "33944776",
doi      = "10.7554/eLife.65088",
pmc      = "PMC8096432"
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@software{tom_breloff_2021_5566503,
author       = {Tom Breloff},
title        = {Plots.jl},
month        = oct,
year         = 2021,
publisher    = {Zenodo},
version      = {v1.22.6},
doi          = {10.5281/zenodo.5566503},
url          = {https://doi.org/10.5281/zenodo.5566503}
}


@article{Diversity.jl-2016,
author        = {Reeve, Richard and Leinster, Tom and Cobbold, Christina A and
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         Matthews, Louise},
title         = {How to partition diversity},
journal       = {ArXiv e-prints},
archivePrefix = "arXiv",
eprint        = {1404.6520},
eprinttype    = {arxiv},
primaryClass  = "q-bio.QM",
keywords      = {Quantitative Biology - Quantitative Methods},
year          = 2016,
month         = dec
}