2020-07-02 10:46:39,107 UTC [14868] INFO esmvalcore._main:154 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Veronika Eyring (PI; DLR, Germany - veronika.eyring@dlr.de) Bouwe Andela (NLESC, Netherlands - b.andela@esciencecenter.nl) Bjoern Broetz (DLR, Germany - bjoern.broetz@dlr.de) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (NLESC, Netherlands - n.drost@esciencecenter.nl) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://esmvaltool.readthedocs.io. Have fun! 2020-07-02 10:46:39,107 UTC [14868] INFO esmvalcore._main:156 Using config file /projects/NS9252K/share/tomast/test_ipcc_node/config-ipcc_node.yml 2020-07-02 10:46:39,108 UTC [14868] INFO esmvalcore._main:157 Writing program log files to: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/main_log.txt /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/main_log_debug.txt 2020-07-02 10:46:39,108 UTC [14868] INFO esmvalcore._main:189 Starting the Earth System Model Evaluation Tool v2.0.0b9 at time: 2020-07-02 10:46:39 UTC 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:193 ---------------------------------------------------------------------- 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:194 RECIPE = /projects/NS9252K/share/tomast/esmvaltool_ipcc_node/standard_recipes/recipe_ocean_bgc.yml 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:195 RUNDIR = /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:196 WORKDIR = /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:197 PREPROCDIR = /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:198 PLOTDIR = /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:199 ---------------------------------------------------------------------- 2020-07-02 10:46:39,109 UTC [14868] INFO esmvalcore._main:202 Running tasks using at most 1 processes 2020-07-02 10:46:39,110 UTC [14868] INFO esmvalcore._main:204 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2020-07-02 10:46:39,110 UTC [14868] INFO esmvalcore._main:207 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2020-07-02 10:46:39,114 UTC [14868] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/recipe_schema.yml 2020-07-02 10:46:39,301 UTC [14868] DEBUG esmvalcore._recipe:951 Retrieving diagnostics from recipe 2020-07-02 10:46:39,302 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_timeseries_volume_average_vs_WOA 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,303 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,304 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_timeseries_volume_average_vs_WOA 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_timeseries_volume_average_no_obs 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,305 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_timeseries_volume_average_no_obs 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_timeseries_surface_average_no_obs 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,306 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_timeseries_surface_average_no_obs 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_timeseries_surface_average_vs_WOA 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,307 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,308 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_timeseries_surface_average_vs_WOA 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_timeseries_scalars 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_timeseries_scalars 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_profile_vs_WOA 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,309 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,310 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_profile_vs_WOA 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_profile_no_obs 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,311 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_profile_no_obs 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_surface_maps_vs_WOA 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,312 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,313 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_surface_maps_vs_WOA 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_surface_maps_no_data 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,314 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_surface_maps_no_data 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_transect_vs_WOA 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,315 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,316 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset WOA 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_transect_vs_WOA 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._recipe:1056 Populating list of variables for diagnostic diag_transect_no_data 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._config:180 Retrieving institutes for dataset HadGEM2-ES 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._config:193 Retrieving activity_id for experiment historical 2020-07-02 10:46:39,317 UTC [14868] DEBUG esmvalcore._recipe:1187 Setting script for diagnostic diag_transect_no_data 2020-07-02 10:46:39,318 UTC [14868] INFO esmvalcore._recipe:1251 Creating tasks from recipe 2020-07-02 10:46:39,318 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_timeseries_volume_average_vs_WOA 2020-07-02 10:46:39,318 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/thetao 2020-07-02 10:46:39,318 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'thetao' 2020-07-02 10:46:39,318 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,318 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,318 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,318 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,319 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,319 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,320 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,321 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao 2020-07-02 10:46:39,321 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,321 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,321 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2020-07-02 10:46:39,322 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,322 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,322 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,349 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,349 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,349 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,350 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,350 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,350 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,350 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:46:39,351 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,398 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:46:39,400 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/so 2020-07-02 10:46:39,400 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'so' 2020-07-02 10:46:39,400 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,400 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,400 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,400 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,400 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,401 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2020-07-02 10:46:39,402 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,402 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,402 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,426 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,426 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,426 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,426 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,426 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,427 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,427 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:46:39,427 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,484 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:46:39,484 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/no3 2020-07-02 10:46:39,484 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'no3' 2020-07-02 10:46:39,484 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,484 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,484 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3 2020-07-02 10:46:39,485 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,486 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,486 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2020-07-02 10:46:39,486 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,486 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,486 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,513 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,513 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,513 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,513 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,513 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,514 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,514 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:46:39,515 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,544 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:46:39,544 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/o2 2020-07-02 10:46:39,544 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'o2' 2020-07-02 10:46:39,544 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,544 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,544 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2 2020-07-02 10:46:39,545 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,546 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,546 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2020-07-02 10:46:39,546 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,546 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,546 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,567 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,567 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,567 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,567 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,567 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,568 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,568 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:46:39,568 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,608 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:46:39,608 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/si 2020-07-02 10:46:39,609 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'si' 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,609 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,610 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si 2020-07-02 10:46:39,610 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,610 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,610 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2020-07-02 10:46:39,611 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,611 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,611 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,646 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,646 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,646 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,646 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,646 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,647 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,647 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:46:39,647 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,682 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:46:39,682 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/volcello 2020-07-02 10:46:39,683 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'volcello' 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'volcello', 'short_name': 'volcello', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,683 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello 2020-07-02 10:46:39,684 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,684 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,684 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2020-07-02 10:46:39,684 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable volcello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,711 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_vs_WOA/volcello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:46:39,711 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:46:39,712 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_timeseries_volume_average_no_obs 2020-07-02 10:46:39,712 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_no_obs/chl 2020-07-02 10:46:39,712 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'chl' 2020-07-02 10:46:39,712 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'chl', 'short_name': 'chl', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,712 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,713 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,713 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,713 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,713 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl 2020-07-02 10:46:39,713 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,714 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,714 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2020-07-02 10:46:39,714 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,714 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,714 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,750 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_no_obs/chl created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:46:39,750 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_no_obs/dfe 2020-07-02 10:46:39,750 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'dfe' 2020-07-02 10:46:39,750 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'dfe', 'short_name': 'dfe', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,750 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,751 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2020-07-02 10:46:39,752 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,752 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,752 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,779 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:46:39,779 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_no_obs/talk 2020-07-02 10:46:39,779 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'talk' 2020-07-02 10:46:39,780 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_global_volume_average', 'mip': 'Oyr', 'variable_group': 'talk', 'short_name': 'talk', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,780 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,780 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,780 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,780 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,781 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk 2020-07-02 10:46:39,781 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,781 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,781 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2020-07-02 10:46:39,781 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,781 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,782 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,811 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_no_obs/talk created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:46:39,811 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_volume_average_no_obs/volcello 2020-07-02 10:46:39,811 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'volcello' 2020-07-02 10:46:39,811 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'volcello', 'short_name': 'volcello', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,811 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,811 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,811 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,812 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,812 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello 2020-07-02 10:46:39,812 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,812 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,812 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2020-07-02 10:46:39,812 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable volcello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,814 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_volume_average_no_obs/volcello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:46:39,814 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2020-07-02 10:46:39,814 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_timeseries_surface_average_no_obs 2020-07-02 10:46:39,814 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_no_obs/talk 2020-07-02 10:46:39,815 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'talk' 2020-07-02 10:46:39,815 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'talk', 'short_name': 'talk', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,815 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,815 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,815 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,815 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,816 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,816 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,818 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_no_obs/talk created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:46:39,818 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_no_obs/intpp 2020-07-02 10:46:39,819 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_2D' task for variable 'intpp' 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'mip': 'Omon', 'variable_group': 'intpp', 'short_name': 'intpp', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:39,819 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp 2020-07-02 10:46:39,820 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:39,820 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,820 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2020-07-02 10:46:39,820 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:39,820 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2020-07-02 10:46:39,821 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:39,856 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:46:39,856 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_no_obs/chl 2020-07-02 10:46:39,856 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'chl' 2020-07-02 10:46:39,856 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'thresholds': [0.1, 0.2, 0.5], 'variable_group': 'chl', 'short_name': 'chl', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,856 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,857 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2020-07-02 10:46:39,858 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,858 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,858 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,860 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_no_obs/chl created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:46:39,860 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_no_obs/areacello 2020-07-02 10:46:39,860 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'areacello' 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'areacello', 'short_name': 'areacello', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello 2020-07-02 10:46:39,861 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,862 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,862 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2020-07-02 10:46:39,862 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,864 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:46:39,864 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2020-07-02 10:46:39,865 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_timeseries_surface_average_vs_WOA 2020-07-02 10:46:39,865 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/thetao 2020-07-02 10:46:39,865 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'thetao' 2020-07-02 10:46:39,865 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,865 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,866 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao 2020-07-02 10:46:39,867 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,867 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,867 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2020-07-02 10:46:39,867 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,867 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,867 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,868 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,868 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,869 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,869 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,869 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,869 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,869 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:46:39,869 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,876 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:46:39,877 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/so 2020-07-02 10:46:39,877 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'so' 2020-07-02 10:46:39,877 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,877 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,877 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,877 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,877 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,878 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2020-07-02 10:46:39,879 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,879 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,879 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,880 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,880 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,880 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,880 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,880 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,881 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,881 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:46:39,881 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,887 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:46:39,887 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/no3 2020-07-02 10:46:39,887 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'no3' 2020-07-02 10:46:39,887 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,887 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,888 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,889 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2020-07-02 10:46:39,889 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,889 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,889 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,890 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,890 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,890 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,890 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,890 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,891 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,891 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:46:39,891 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,897 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:46:39,897 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/o2 2020-07-02 10:46:39,897 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'o2' 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,898 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2 2020-07-02 10:46:39,899 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,899 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,899 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2020-07-02 10:46:39,899 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,899 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,899 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,900 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,900 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,901 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,901 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,901 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,901 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,901 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:46:39,901 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,907 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:46:39,907 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/si 2020-07-02 10:46:39,908 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'si' 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,908 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,909 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,909 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,910 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,910 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,911 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,911 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,911 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,911 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,911 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:46:39,911 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,918 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:46:39,919 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/areacello 2020-07-02 10:46:39,919 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'areacello' 2020-07-02 10:46:39,919 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'areacello', 'short_name': 'areacello', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,919 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,919 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,919 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,920 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,920 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello 2020-07-02 10:46:39,920 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:39,920 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,920 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2020-07-02 10:46:39,920 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,922 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:46:39,922 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:46:39,922 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_timeseries_scalars 2020-07-02 10:46:39,923 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_timeseries_scalars/mfo 2020-07-02 10:46:39,923 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_timeseries_scalar' task for variable 'mfo' 2020-07-02 10:46:39,923 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_timeseries_scalar', 'mip': 'Omon', 'variable_group': 'mfo', 'short_name': 'mfo', 'diagnostic': 'diag_timeseries_scalars', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,923 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,923 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,923 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/mfo 2020-07-02 10:46:39,923 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/mfo 2020-07-02 10:46:39,924 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo 2020-07-02 10:46:39,924 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/mfo 2020-07-02 10:46:39,924 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,924 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['mfo_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo'] 2020-07-02 10:46:39,924 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1859 and end_year 2005 2020-07-02 10:46:39,924 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable mfo of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2020-07-02 10:46:39,925 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1859 and end_year 2005 2020-07-02 10:46:39,927 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_timeseries_scalars/mfo created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2020-07-02 10:46:39,927 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_timeseries_scalars/Scalar_timeseries 2020-07-02 10:46:39,928 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_profile_vs_WOA 2020-07-02 10:46:39,928 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/thetao 2020-07-02 10:46:39,928 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'thetao' 2020-07-02 10:46:39,928 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,928 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,928 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,928 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,928 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,929 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2020-07-02 10:46:39,930 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,930 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,930 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,931 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,931 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,931 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,931 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,931 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,932 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,932 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:46:39,932 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,938 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/thetao created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:46:39,938 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/so 2020-07-02 10:46:39,938 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'so' 2020-07-02 10:46:39,938 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,938 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,938 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:39,939 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,940 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2020-07-02 10:46:39,940 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,940 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:39,940 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:39,941 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,941 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,941 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,941 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,941 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,942 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,942 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:46:39,942 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,949 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/so created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:46:39,949 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/no3 2020-07-02 10:46:39,949 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'no3' 2020-07-02 10:46:39,949 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,949 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,949 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,949 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,950 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2020-07-02 10:46:39,951 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,951 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,951 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,952 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,952 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,952 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,952 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,952 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,953 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,953 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:46:39,953 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,959 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/no3 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:46:39,960 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/o2 2020-07-02 10:46:39,960 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'o2' 2020-07-02 10:46:39,960 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,960 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,960 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,960 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,960 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2020-07-02 10:46:39,961 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,961 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,962 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,962 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,963 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:46:39,963 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,969 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/o2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:46:39,970 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/si 2020-07-02 10:46:39,970 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'si' 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_profile_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,970 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,971 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si 2020-07-02 10:46:39,971 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:39,971 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,971 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2020-07-02 10:46:39,971 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,971 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,972 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,972 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,973 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:46:39,973 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:39,979 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/si created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:46:39,979 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_vs_WOA/volcello 2020-07-02 10:46:39,980 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'volcello' 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'volcello', 'short_name': 'volcello', 'diagnostic': 'diag_profile_vs_WOA', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,980 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello 2020-07-02 10:46:39,981 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,981 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,981 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2020-07-02 10:46:39,981 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable volcello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,983 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_vs_WOA/volcello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:46:39,983 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_profile_vs_WOA/Global_profile_vs_WOA 2020-07-02 10:46:39,983 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_profile_no_obs 2020-07-02 10:46:39,984 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_no_obs/chl 2020-07-02 10:46:39,984 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'chl' 2020-07-02 10:46:39,984 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'chl', 'short_name': 'chl', 'diagnostic': 'diag_profile_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,984 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,984 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,984 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,984 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,985 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,985 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,987 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_no_obs/chl created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:46:39,987 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_no_obs/dfe 2020-07-02 10:46:39,987 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'dfe' 2020-07-02 10:46:39,987 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'dfe', 'short_name': 'dfe', 'diagnostic': 'diag_profile_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,987 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:39,988 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,989 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2020-07-02 10:46:39,989 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,989 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,989 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,991 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_no_obs/dfe created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:46:39,991 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_no_obs/talk 2020-07-02 10:46:39,991 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_global_profile' task for variable 'talk' 2020-07-02 10:46:39,991 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_global_profile', 'mip': 'Oyr', 'variable_group': 'talk', 'short_name': 'talk', 'diagnostic': 'diag_profile_no_obs', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,991 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,991 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/talk 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2020-07-02 10:46:39,992 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,992 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:39,993 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:39,994 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_no_obs/talk created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:46:39,995 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_profile_no_obs/volcello 2020-07-02 10:46:39,995 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'volcello' 2020-07-02 10:46:39,995 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'volcello', 'short_name': 'volcello', 'diagnostic': 'diag_profile_no_obs', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:39,995 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,995 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,995 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,995 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,996 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello 2020-07-02 10:46:39,996 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/volcello 2020-07-02 10:46:39,996 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,996 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2020-07-02 10:46:39,996 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable volcello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:39,997 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_profile_no_obs/volcello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:46:39,998 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_profile_no_obs/Global_profile_no_obs 2020-07-02 10:46:39,998 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_surface_maps_vs_WOA 2020-07-02 10:46:39,998 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/thetao 2020-07-02 10:46:39,998 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'thetao' 2020-07-02 10:46:39,998 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:39,998 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Omon', 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:39,998 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao 2020-07-02 10:46:39,999 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:40,000 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,000 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2020-07-02 10:46:40,000 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,000 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:40,000 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,001 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,002 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:46:40,002 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,009 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/thetao created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:46:40,009 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/so 2020-07-02 10:46:40,009 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'so' 2020-07-02 10:46:40,009 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,009 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,009 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,010 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,011 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2020-07-02 10:46:40,011 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,011 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:40,011 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,012 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,012 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,012 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,013 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,013 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,013 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,013 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:46:40,013 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,019 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/so created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:46:40,019 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/no3 2020-07-02 10:46:40,020 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'no3' 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,020 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,021 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,021 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,022 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,022 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,023 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,023 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,023 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,023 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,023 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:46:40,023 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,029 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/no3 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:46:40,029 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/si 2020-07-02 10:46:40,030 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'si' 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,030 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,031 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,031 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,032 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,033 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:46:40,033 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,040 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/si created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:46:40,040 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/o2 2020-07-02 10:46:40,040 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'o2' 2020-07-02 10:46:40,040 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,040 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_regrid_3D', 'mip': 'Oyr', 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_surface_maps_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,040 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,040 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2020-07-02 10:46:40,041 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,042 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,042 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,043 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,043 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:46:40,044 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,050 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/o2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:46:40,050 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_vs_WOA/areacello 2020-07-02 10:46:40,050 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'areacello' 2020-07-02 10:46:40,050 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'areacello', 'short_name': 'areacello', 'diagnostic': 'diag_surface_maps_vs_WOA', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,050 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,050 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,050 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,050 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,051 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello 2020-07-02 10:46:40,051 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,051 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,051 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2020-07-02 10:46:40,051 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:40,052 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_vs_WOA/areacello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:46:40,053 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2020-07-02 10:46:40,053 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2020-07-02 10:46:40,053 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_surface_maps_no_data 2020-07-02 10:46:40,053 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_no_data/intpp 2020-07-02 10:46:40,053 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_2D' task for variable 'intpp' 2020-07-02 10:46:40,053 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_2D', 'mip': 'Omon', 'variable_group': 'intpp', 'short_name': 'intpp', 'diagnostic': 'diag_surface_maps_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/intpp 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,054 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2020-07-02 10:46:40,055 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:40,055 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2020-07-02 10:46:40,055 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:40,057 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_no_data/intpp created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:46:40,057 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_no_data/fgco2 2020-07-02 10:46:40,057 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_2D' task for variable 'fgco2' 2020-07-02 10:46:40,057 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_2D', 'mip': 'Omon', 'variable_group': 'fgco2', 'short_name': 'fgco2', 'diagnostic': 'diag_surface_maps_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,057 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,057 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/fgco2 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/fgco2 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/{latestversion}/fgco2 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,058 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['fgco2_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2'] 2020-07-02 10:46:40,059 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:40,059 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable fgco2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2020-07-02 10:46:40,059 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1959 and end_year 2005 2020-07-02 10:46:40,107 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_no_data/fgco2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2020-07-02 10:46:40,108 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_no_data/chl 2020-07-02 10:46:40,108 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_3D' task for variable 'chl' 2020-07-02 10:46:40,108 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_3D', 'mip': 'Oyr', 'variable_group': 'chl', 'short_name': 'chl', 'diagnostic': 'diag_surface_maps_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,108 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,108 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2020-07-02 10:46:40,109 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,110 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,110 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,113 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_no_data/chl created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:46:40,113 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_no_data/dfe 2020-07-02 10:46:40,114 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_surface_map_3D' task for variable 'dfe' 2020-07-02 10:46:40,114 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_surface_map_3D', 'mip': 'Oyr', 'variable_group': 'dfe', 'short_name': 'dfe', 'diagnostic': 'diag_surface_maps_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,114 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,114 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,115 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,115 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,115 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe 2020-07-02 10:46:40,115 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,116 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,116 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2020-07-02 10:46:40,116 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,116 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,116 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,120 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_no_data/dfe created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:46:40,120 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_surface_maps_no_data/areacello 2020-07-02 10:46:40,120 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'default' task for variable 'areacello' 2020-07-02 10:46:40,121 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'mip': 'fx', 'variable_group': 'areacello', 'short_name': 'areacello', 'diagnostic': 'diag_surface_maps_no_data', 'preprocessor': 'default', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,121 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,121 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,121 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,121 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,122 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello 2020-07-02 10:46:40,122 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/{latestversion}/areacello 2020-07-02 10:46:40,122 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,122 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2020-07-02 10:46:40,123 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:46:40,126 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_surface_maps_no_data/areacello created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:46:40,126 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_surface_maps_no_data/Global_Ocean_surface_map 2020-07-02 10:46:40,127 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_transect_vs_WOA 2020-07-02 10:46:40,127 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_vs_WOA/thetao 2020-07-02 10:46:40,127 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'thetao' 2020-07-02 10:46:40,127 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Omon', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,127 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Omon', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'variable_group': 'thetao', 'short_name': 'thetao', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,127 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,127 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,127 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/thetao 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,128 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao'] 2020-07-02 10:46:40,129 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,129 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:40,129 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,130 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,130 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,130 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,130 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,131 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,131 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,131 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable thetao of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:46:40,131 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,138 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_vs_WOA/thetao created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:46:40,138 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_vs_WOA/so 2020-07-02 10:46:40,138 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'so' 2020-07-02 10:46:40,138 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,138 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Omon', 'variable_group': 'so', 'short_name': 'so', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,138 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,138 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/{latestversion}/so 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,139 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so'] 2020-07-02 10:46:40,140 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,140 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:40,140 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1999 and end_year 2005 2020-07-02 10:46:40,141 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,141 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,141 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,141 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,141 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,142 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,142 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable so of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:46:40,142 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,149 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_vs_WOA/so created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:46:40,149 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_vs_WOA/no3 2020-07-02 10:46:40,150 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'no3' 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'thresholds': [10.0, 20.0, 30.0], 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'thresholds': [10.0, 20.0, 30.0], 'variable_group': 'no3', 'short_name': 'no3', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,150 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/no3 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,151 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,151 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,152 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,152 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,153 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,153 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,153 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,153 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,153 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable no3 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:46:40,153 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,159 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_vs_WOA/no3 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:46:40,160 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_vs_WOA/si 2020-07-02 10:46:40,160 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'si' 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'variable_group': 'si', 'short_name': 'si', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,160 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/si 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,161 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,161 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,162 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,163 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable si of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:46:40,163 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,169 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_vs_WOA/si created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:46:40,170 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_vs_WOA/o2 2020-07-02 10:46:40,170 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'o2' 2020-07-02 10:46:40,170 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'thresholds': [0.03], 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'CMIP5'} 2020-07-02 10:46:40,170 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'thresholds': [0.03], 'variable_group': 'o2', 'short_name': 'o2', 'diagnostic': 'diag_transect_vs_WOA', 'dataset': 'WOA', 'project': 'OBS', 'type': 'clim', 'version': '2013v2', 'start_year': 2000, 'end_year': 2000, 'tier': 2, 'recipe_dataset_index': 1, 'alias': 'OBS'} 2020-07-02 10:46:40,170 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,170 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,170 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/o2 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2020-07-02 10:46:40,171 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,171 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,172 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/obsdata/Tier2/WOA 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS2980K/NTK-data/obsdata/Tier2/WOA 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._config:170 Retrieving OBS configuration 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS2980K/NTK-data/obsdata/Tier2/WOA'] 2020-07-02 10:46:40,173 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,173 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable o2 of dataset WOA: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:46:40,174 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 2000 and end_year 2000 2020-07-02 10:46:40,180 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_vs_WOA/o2 created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:46:40,180 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_transect_vs_WOA/Transects_vs_WOA 2020-07-02 10:46:40,180 UTC [14868] INFO esmvalcore._recipe:1256 Creating tasks for diagnostic diag_transect_no_data 2020-07-02 10:46:40,180 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_no_data/chl 2020-07-02 10:46:40,180 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'chl' 2020-07-02 10:46:40,180 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'variable_group': 'chl', 'short_name': 'chl', 'diagnostic': 'diag_transect_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/chl 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,181 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2020-07-02 10:46:40,182 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,182 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,182 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,184 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_no_data/chl created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:46:40,184 UTC [14868] INFO esmvalcore._recipe:1261 Creating preprocessor task diag_transect_no_data/dfe 2020-07-02 10:46:40,184 UTC [14868] INFO esmvalcore._recipe:861 Creating preprocessor 'prep_transect_AMT' task for variable 'dfe' 2020-07-02 10:46:40,184 UTC [14868] DEBUG esmvalcore._recipe:93 If not present: adding keys from CMOR table to {'preprocessor': 'prep_transect_AMT', 'mip': 'Oyr', 'variable_group': 'dfe', 'short_name': 'dfe', 'diagnostic': 'diag_transect_no_data', 'dataset': 'HadGEM2-ES', 'project': 'CMIP5', 'exp': 'historical', 'ensemble': 'r1i1p1', 'start_year': 2001, 'end_year': 2004, 'recipe_dataset_index': 0, 'institute': ['INPE', 'MOHC'], 'alias': 'HadGEM2-ES'} 2020-07-02 10:46:40,184 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,184 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9252K/ESGF/cmip5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/INPE/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:206 Found /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:209 Skipping non-existent /projects/NS9034K/NORSTORE_OSL_DISK/NS9034K/CMIP5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/{latestversion}/dfe 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:23 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2020-07-02 10:46:40,185 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,186 UTC [14868] INFO esmvalcore._recipe:527 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:46:40,186 UTC [14868] DEBUG esmvalcore._data_finder:75 Found start_year 1960 and end_year 2005 2020-07-02 10:46:40,188 UTC [14868] INFO esmvalcore._recipe:767 PreprocessingTask diag_transect_no_data/dfe created. It will create the files: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:46:40,188 UTC [14868] INFO esmvalcore._recipe:1277 Creating diagnostic task diag_transect_no_data/Transects_no_data 2020-07-02 10:46:40,188 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_timeseries_volume_average_vs_WOA script Global_Volume_Average_timeseries 2020-07-02 10:46:40,189 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/thetao matches ['diag_timeseries_volume_average_vs_WOA/thetao'] 2020-07-02 10:46:40,189 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/so matches ['diag_timeseries_volume_average_vs_WOA/so'] 2020-07-02 10:46:40,189 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/no3 matches ['diag_timeseries_volume_average_vs_WOA/no3'] 2020-07-02 10:46:40,190 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/o2 matches ['diag_timeseries_volume_average_vs_WOA/o2'] 2020-07-02 10:46:40,190 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/si matches ['diag_timeseries_volume_average_vs_WOA/si'] 2020-07-02 10:46:40,190 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_vs_WOA/volcello matches ['diag_timeseries_volume_average_vs_WOA/volcello'] 2020-07-02 10:46:40,190 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_timeseries_volume_average_no_obs script Global_Volume_verage_timeseries 2020-07-02 10:46:40,191 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_no_obs/chl matches ['diag_timeseries_volume_average_no_obs/chl'] 2020-07-02 10:46:40,191 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_no_obs/dfe matches ['diag_timeseries_volume_average_no_obs/dfe'] 2020-07-02 10:46:40,191 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_no_obs/talk matches ['diag_timeseries_volume_average_no_obs/talk'] 2020-07-02 10:46:40,192 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_volume_average_no_obs/volcello matches ['diag_timeseries_volume_average_no_obs/volcello'] 2020-07-02 10:46:40,192 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_timeseries_surface_average_no_obs script Global_Volume_Average_timeseries 2020-07-02 10:46:40,192 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_no_obs/talk matches ['diag_timeseries_surface_average_no_obs/talk'] 2020-07-02 10:46:40,192 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_no_obs/intpp matches ['diag_timeseries_surface_average_no_obs/intpp'] 2020-07-02 10:46:40,193 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_no_obs/chl matches ['diag_timeseries_surface_average_no_obs/chl'] 2020-07-02 10:46:40,193 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_no_obs/areacello matches ['diag_timeseries_surface_average_no_obs/areacello'] 2020-07-02 10:46:40,193 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_timeseries_surface_average_vs_WOA script Global_Volume_Average_timeseries 2020-07-02 10:46:40,194 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/thetao matches ['diag_timeseries_surface_average_vs_WOA/thetao'] 2020-07-02 10:46:40,194 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/so matches ['diag_timeseries_surface_average_vs_WOA/so'] 2020-07-02 10:46:40,194 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/no3 matches ['diag_timeseries_surface_average_vs_WOA/no3'] 2020-07-02 10:46:40,195 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/o2 matches ['diag_timeseries_surface_average_vs_WOA/o2'] 2020-07-02 10:46:40,195 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/si matches ['diag_timeseries_surface_average_vs_WOA/si'] 2020-07-02 10:46:40,195 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_surface_average_vs_WOA/areacello matches ['diag_timeseries_surface_average_vs_WOA/areacello'] 2020-07-02 10:46:40,195 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_timeseries_scalars script Scalar_timeseries 2020-07-02 10:46:40,196 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_timeseries_scalars/mfo matches ['diag_timeseries_scalars/mfo'] 2020-07-02 10:46:40,196 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_profile_vs_WOA script Global_profile_vs_WOA 2020-07-02 10:46:40,196 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/thetao matches ['diag_profile_vs_WOA/thetao'] 2020-07-02 10:46:40,196 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/so matches ['diag_profile_vs_WOA/so'] 2020-07-02 10:46:40,196 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/no3 matches ['diag_profile_vs_WOA/no3'] 2020-07-02 10:46:40,197 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/o2 matches ['diag_profile_vs_WOA/o2'] 2020-07-02 10:46:40,197 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/si matches ['diag_profile_vs_WOA/si'] 2020-07-02 10:46:40,197 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_vs_WOA/volcello matches ['diag_profile_vs_WOA/volcello'] 2020-07-02 10:46:40,197 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_profile_no_obs script Global_profile_no_obs 2020-07-02 10:46:40,198 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_no_obs/chl matches ['diag_profile_no_obs/chl'] 2020-07-02 10:46:40,198 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_no_obs/dfe matches ['diag_profile_no_obs/dfe'] 2020-07-02 10:46:40,198 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_no_obs/talk matches ['diag_profile_no_obs/talk'] 2020-07-02 10:46:40,198 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_profile_no_obs/volcello matches ['diag_profile_no_obs/volcello'] 2020-07-02 10:46:40,198 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_surface_map 2020-07-02 10:46:40,199 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2020-07-02 10:46:40,199 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2020-07-02 10:46:40,199 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2020-07-02 10:46:40,199 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_model_vs_obs 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2020-07-02 10:46:40,200 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_surface_maps_no_data script Global_Ocean_surface_map 2020-07-02 10:46:40,201 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_no_data/intpp matches ['diag_surface_maps_no_data/intpp'] 2020-07-02 10:46:40,201 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_no_data/fgco2 matches ['diag_surface_maps_no_data/fgco2'] 2020-07-02 10:46:40,201 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_no_data/chl matches ['diag_surface_maps_no_data/chl'] 2020-07-02 10:46:40,202 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_no_data/dfe matches ['diag_surface_maps_no_data/dfe'] 2020-07-02 10:46:40,202 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_surface_maps_no_data/areacello matches ['diag_surface_maps_no_data/areacello'] 2020-07-02 10:46:40,202 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_transect_vs_WOA script Transects_vs_WOA 2020-07-02 10:46:40,202 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_vs_WOA/thetao matches ['diag_transect_vs_WOA/thetao'] 2020-07-02 10:46:40,202 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_vs_WOA/so matches ['diag_transect_vs_WOA/so'] 2020-07-02 10:46:40,203 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_vs_WOA/no3 matches ['diag_transect_vs_WOA/no3'] 2020-07-02 10:46:40,203 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_vs_WOA/si matches ['diag_transect_vs_WOA/si'] 2020-07-02 10:46:40,203 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_vs_WOA/o2 matches ['diag_transect_vs_WOA/o2'] 2020-07-02 10:46:40,203 UTC [14868] DEBUG esmvalcore._recipe:1235 Linking tasks for diagnostic diag_transect_no_data script Transects_no_data 2020-07-02 10:46:40,203 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_no_data/chl matches ['diag_transect_no_data/chl'] 2020-07-02 10:46:40,204 UTC [14868] DEBUG esmvalcore._recipe:1244 Pattern diag_transect_no_data/dfe matches ['diag_transect_no_data/dfe'] 2020-07-02 10:46:40,204 UTC [14868] INFO esmvalcore._recipe:1305 These tasks will be executed: diag_profile_no_obs/dfe, diag_surface_maps_vs_WOA/si, diag_profile_no_obs/talk, diag_surface_maps_no_data/areacello, diag_transect_vs_WOA/so, diag_timeseries_surface_average_vs_WOA/areacello, diag_transect_vs_WOA/si, diag_surface_maps_vs_WOA/no3, diag_surface_maps_no_data/Global_Ocean_surface_map, diag_profile_vs_WOA/o2, diag_timeseries_volume_average_vs_WOA/thetao, diag_surface_maps_no_data/fgco2, diag_timeseries_volume_average_vs_WOA/o2, diag_timeseries_volume_average_no_obs/chl, diag_profile_no_obs/Global_profile_no_obs, diag_timeseries_surface_average_vs_WOA/thetao, diag_timeseries_volume_average_vs_WOA/si, diag_transect_vs_WOA/Transects_vs_WOA, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_surface_maps_vs_WOA/thetao, diag_timeseries_surface_average_no_obs/areacello, diag_timeseries_surface_average_vs_WOA/no3, diag_transect_vs_WOA/no3, diag_surface_maps_vs_WOA/so, diag_profile_no_obs/chl, diag_surface_maps_no_data/intpp, diag_timeseries_surface_average_no_obs/chl, diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries, diag_transect_no_data/Transects_no_data, diag_surface_maps_vs_WOA/o2, diag_profile_vs_WOA/Global_profile_vs_WOA, diag_timeseries_volume_average_no_obs/volcello, diag_timeseries_scalars/mfo, diag_surface_maps_vs_WOA/areacello, diag_timeseries_volume_average_vs_WOA/so, diag_timeseries_surface_average_no_obs/intpp, diag_profile_vs_WOA/so, diag_transect_no_data/dfe, diag_profile_no_obs/volcello, diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs, diag_transect_vs_WOA/o2, diag_surface_maps_no_data/chl, diag_profile_vs_WOA/volcello, diag_timeseries_volume_average_vs_WOA/no3, diag_timeseries_surface_average_vs_WOA/o2, diag_timeseries_surface_average_vs_WOA/si, diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries, diag_surface_maps_no_data/dfe, diag_timeseries_scalars/Scalar_timeseries, diag_timeseries_volume_average_no_obs/dfe, diag_timeseries_volume_average_no_obs/talk, diag_timeseries_volume_average_vs_WOA/volcello, diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries, diag_transect_vs_WOA/thetao, diag_profile_vs_WOA/no3, diag_timeseries_surface_average_no_obs/talk, diag_transect_no_data/chl, diag_timeseries_surface_average_vs_WOA/so, diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries, diag_profile_vs_WOA/thetao, diag_profile_vs_WOA/si 2020-07-02 10:46:40,239 UTC [14868] DEBUG esmvalcore._main:225 Recipe summary: DiagnosticTask: script: ocean/diagnostic_profiles.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_profile_no_obs/Global_profile_no_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_profile_no_obs/Global_profile_no_obs', 'script': 'Global_profile_no_obs', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_profile_no_obs/Global_profile_no_obs', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_profiles.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_profile_vs_WOA/Global_profile_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_profile_vs_WOA/Global_profile_vs_WOA', 'script': 'Global_profile_vs_WOA', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_profile_vs_WOA/Global_profile_vs_WOA', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'annual_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_profile_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_transects.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_transect_vs_WOA/Transects_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_transect_vs_WOA/Transects_vs_WOA', 'script': 'Transects_vs_WOA', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_transect_vs_WOA/Transects_vs_WOA', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_maps.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_transects.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_transect_no_data/Transects_no_data', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_transect_no_data/Transects_no_data', 'script': 'Transects_no_data', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_transect_no_data/Transects_no_data', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_timeseries.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_model_vs_obs.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'script': 'Global_Ocean_model_vs_obs', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'regrid', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_maps.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_surface_maps_no_data/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_surface_maps_no_data/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_surface_maps_no_data/Global_Ocean_surface_map', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'intpp'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'intpp'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'intpp'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'climate_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'fgco2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'fgco2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'fgco2'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'climate_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_timeseries.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'script': 'Global_Volume_verage_timeseries', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'dfe'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'dfe'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_timeseries.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_scalars/Scalar_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_scalars/Scalar_timeseries', 'script': 'Scalar_timeseries', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_scalars/Scalar_timeseries', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'mfo'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'mfo'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'mfo'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_timeseries.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'talk'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'talk'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'intpp'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'intpp'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'intpp'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'chl'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'chl'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'project': 'CMIP5', 'short_name': 'areacello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'areacello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: script: ocean/diagnostic_timeseries.py { 'auxiliary_data_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.0.0b9', 'work_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'thetao'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'project': 'OBS', 'short_name': 'thetao'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'thetao'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'project': 'OBS', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'mon', 'mip': 'Omon', 'project': 'OBS', 'short_name': 'so'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'so'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'mon', 'mip': 'Omon', 'project': 'CMIP5', 'short_name': 'so'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'project': 'OBS', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'no3'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'no3'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'no3'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'project': 'OBS', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'o2'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'o2'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'o2'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics', 'multi_model_statistics', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2005, 'start_day': 1, 'start_month': 1, 'start_year': 2001}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'project': 'CMIP5', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'CMIP5', 'short_name': 'si'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_time': {'end_day': 1, 'end_month': 1, 'end_year': 2001, 'start_day': 1, 'start_month': 1, 'start_year': 2000}, 'fix_data': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'fix_file': {'dataset': 'WOA', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'project': 'OBS', 'short_name': 'si'}, 'fix_metadata': {'check_level': , 'dataset': 'WOA', 'frequency': 'yr', 'mip': 'Oyr', 'project': 'OBS', 'short_name': 'si'}, 'load': {'callback': }, 'multi_model_statistics': {'output_products': {'mean': }, 'span': 'overlap', 'statistics': ['mean']}, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc {'cleanup': {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'volcello'}, 'concatenate': {}, 'fix_data': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_file': {'dataset': 'HadGEM2-ES', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed', 'project': 'CMIP5', 'short_name': 'volcello'}, 'fix_metadata': {'check_level': , 'dataset': 'HadGEM2-ES', 'frequency': 'fx', 'mip': 'fx', 'project': 'CMIP5', 'short_name': 'volcello'}, 'load': {'callback': }, 'save': {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}} ancestors: None 2020-07-02 10:46:40,307 UTC [14868] INFO esmvalcore._task:612 Running 61 tasks sequentially 2020-07-02 10:46:40,308 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/thetao in process [14868] 2020-07-02 10:46:40,313 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:46:40,313 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:46:40,313 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:46:40,314 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'}) 2020-07-02 10:46:40,315 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:46:40,315 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'callback': }) 2020-07-02 10:46:40,315 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:46:41,073 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:46:41,074 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:46:41,227 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:46:41,228 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:46:41,228 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:46:41,230 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_potential_temperature / (K) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:46:41,364 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:46:41,366 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_potential_temperature / (K) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:46:41,442 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:46:41,443 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_potential_temperature / (K) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:46:41,444 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:46:41,445 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(sea_water_potential_temperature / (K) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'operator': 'mean'}) 2020-07-02 10:46:41,446 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:02,126 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:47:02,127 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:02,127 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'}) 2020-07-02 10:47:02,128 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:02,128 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc, {'callback': }) 2020-07-02 10:47:02,128 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:47:02,187 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:02,188 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:02,189 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:02,190 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:02,191 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:02,192 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:02,193 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:02,195 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:02,331 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:47:02,331 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:02,333 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:02,333 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:02,335 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:47:02,335 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:03,310 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:03,311 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:47:03,311 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:03,311 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:03,311 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:03,332 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:47:03,332 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:03,332 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:47:03,332 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:03,333 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_potential_temperature / (K) (time: 48) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:03,333 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:03,334 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}) 2020-07-02 10:47:03,336 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:47:03,349 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:03,350 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}) 2020-07-02 10:47:03,350 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:47:03,350 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:03,351 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_potential_temperature / (K) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 2.5 meters, bound=(-2.5, 7.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: depth, longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:03,351 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:03,351 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}) 2020-07-02 10:47:03,351 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:47:03,364 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:03,364 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}) 2020-07-02 10:47:03,369 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/thetao (priority 0) in 0:00:23.061607 2020-07-02 10:47:03,370 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/so in process [14868] 2020-07-02 10:47:03,375 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:03,375 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:47:03,375 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:03,375 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'}) 2020-07-02 10:47:03,376 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:03,376 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc, {'callback': }) 2020-07-02 10:47:03,376 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:47:03,457 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:03,458 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:03,458 UTC [14868] WARNING esmvalcore.cmor.check:196 There were warnings in variable so: Variable so units 0.001 will be converted to psu 2020-07-02 10:47:03,459 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:03,459 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:03,460 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:03,461 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:03,462 UTC [14868] WARNING esmvalcore.cmor.check:196 There were warnings in variable so: Variable so units 0.001 will be converted to psu 2020-07-02 10:47:03,462 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:03,463 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:03,468 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:47:03,468 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:03,470 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:03,471 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:03,472 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:47:03,473 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:04,540 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:47:04,540 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:04,540 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'}) 2020-07-02 10:47:04,540 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:04,540 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'callback': }) 2020-07-02 10:47:04,541 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:47:05,337 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:05,338 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:05,456 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:05,457 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:05,458 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:05,459 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_salinity / (1.0) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:05,576 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:05,578 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_salinity / (1.0) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:05,666 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:05,667 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_salinity / (1.0) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:05,668 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:05,669 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(sea_water_salinity / (1.0) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'operator': 'mean'}) 2020-07-02 10:47:05,669 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:23,304 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:23,305 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:47:23,305 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:23,306 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:23,306 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:23,326 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:47:23,326 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:23,326 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:47:23,326 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:23,327 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_salinity / (1.0) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 2.5 meters, bound=(-2.5, 7.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: depth, longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:23,327 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:23,327 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}) 2020-07-02 10:47:23,328 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:47:23,346 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:23,346 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}) 2020-07-02 10:47:23,346 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:47:23,346 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:23,347 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_salinity / (1.0) (time: 48) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:23,347 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:23,348 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}) 2020-07-02 10:47:23,348 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:47:23,359 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:23,359 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}) 2020-07-02 10:47:23,366 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/so (priority 1) in 0:00:19.996338 2020-07-02 10:47:23,366 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/no3 in process [14868] 2020-07-02 10:47:23,373 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:23,373 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:47:23,373 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:23,373 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'}) 2020-07-02 10:47:23,374 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:23,374 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc, {'callback': }) 2020-07-02 10:47:23,374 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:47:23,488 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:23,488 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:23,490 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:23,490 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:23,491 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:23,492 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:23,493 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:23,494 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:23,499 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:47:23,499 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:23,501 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:23,501 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:23,502 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:47:23,503 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:24,521 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:47:24,521 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:24,522 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'}) 2020-07-02 10:47:24,522 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:24,522 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:24,522 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:25,002 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:25,003 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:25,104 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:25,105 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:25,106 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:25,107 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:25,176 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:25,177 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:25,214 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:25,216 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:25,216 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:25,217 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:25,217 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:26,755 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:26,756 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:47:26,756 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:26,756 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:26,756 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:26,759 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:47:26,760 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:26,760 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:47:26,760 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:26,760 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 2.5 meters, bound=(-2.5, 7.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: depth, longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:26,761 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:26,761 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}) 2020-07-02 10:47:26,763 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:47:26,776 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:26,777 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}) 2020-07-02 10:47:26,777 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:47:26,777 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:26,778 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:26,778 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:26,778 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}) 2020-07-02 10:47:26,778 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:47:26,789 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:26,789 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}) 2020-07-02 10:47:26,794 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/no3 (priority 2) in 0:00:03.427710 2020-07-02 10:47:26,794 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/o2 in process [14868] 2020-07-02 10:47:26,799 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:26,799 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:47:26,799 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:26,799 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'}) 2020-07-02 10:47:26,799 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:26,800 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc, {'callback': }) 2020-07-02 10:47:26,800 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:47:26,865 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:26,866 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:26,867 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:26,868 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:26,868 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:26,869 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:26,870 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:26,871 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:26,876 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:47:26,876 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:26,878 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:26,878 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:26,879 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:47:26,879 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:27,973 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:47:27,973 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:27,974 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'}) 2020-07-02 10:47:27,974 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:27,974 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:27,974 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:28,560 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:28,561 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:28,632 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:28,632 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:28,633 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:28,634 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:28,703 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:28,705 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:28,744 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:28,746 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:28,746 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:28,747 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:28,748 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:30,264 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:30,265 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:47:30,265 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:30,265 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:30,265 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:30,269 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:47:30,269 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:30,269 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:47:30,269 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:30,270 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 2.5 meters, bound=(-2.5, 7.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: depth, longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:30,270 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:30,270 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}) 2020-07-02 10:47:30,271 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:47:30,284 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:30,284 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}) 2020-07-02 10:47:30,284 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:47:30,284 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:30,285 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:30,285 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:30,286 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}) 2020-07-02 10:47:30,286 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:47:30,297 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:30,297 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}) 2020-07-02 10:47:30,303 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/o2 (priority 3) in 0:00:03.508343 2020-07-02 10:47:30,303 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/si in process [14868] 2020-07-02 10:47:30,308 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:30,308 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:47:30,308 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:30,308 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'}) 2020-07-02 10:47:30,309 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:30,309 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:30,309 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:30,826 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:30,826 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:30,898 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:30,899 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:30,900 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:30,901 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:30,972 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:30,974 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:31,013 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:31,014 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:31,015 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:31,016 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:31,016 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'}) 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc, {'callback': }) 2020-07-02 10:47:32,536 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:47:32,621 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:32,622 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:32,623 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:32,623 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:32,624 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:32,625 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:32,626 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:32,627 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:32,631 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:47:32,631 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:32,633 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:32,633 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:32,634 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:47:32,634 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:33,630 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:33,631 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:47:33,631 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:33,631 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:33,631 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:33,635 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:47:33,635 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:33,635 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:47:33,635 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:33,636 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:33,636 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:33,636 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}) 2020-07-02 10:47:33,637 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:47:33,651 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:33,651 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}) 2020-07-02 10:47:33,651 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:47:33,651 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:33,652 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 2.5 meters, bound=(-2.5, 7.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: depth, longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:33,652 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:33,653 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}) 2020-07-02 10:47:33,653 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:47:33,664 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:33,664 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}) 2020-07-02 10:47:33,669 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/si (priority 4) in 0:00:03.366081 2020-07-02 10:47:33,669 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/volcello in process [14868] 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data'] 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed'}) 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'callback': }) 2020-07-02 10:47:33,672 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:47:33,708 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:33,709 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:33,710 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:33,710 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:33,711 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:33,712 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'volcello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:33,712 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:33,713 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:33,713 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:33,714 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'volcello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:33,714 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:33,714 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}) 2020-07-02 10:47:33,715 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:47:33,860 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:33,861 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_vs_WOA/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}) 2020-07-02 10:47:33,864 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/volcello (priority 5) in 0:00:00.194938 2020-07-02 10:47:33,864 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries in process [14868] 2020-07-02 10:47:33,869 UTC [14868] INFO esmvalcore._task:406 Running command ['/conda/esmvaltool/2.0.0b4/bin/python', '/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2020-07-02 10:47:33,869 UTC [14868] DEBUG esmvalcore._task:407 in environment {'MPLBACKEND': 'Agg'} 2020-07-02 10:47:33,870 UTC [14868] DEBUG esmvalcore._task:409 in current working directory: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:47:33,870 UTC [14868] INFO esmvalcore._task:410 Writing output to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:47:33,870 UTC [14868] INFO esmvalcore._task:411 Writing plots to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:47:33,870 UTC [14868] INFO esmvalcore._task:412 Writing log to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2020-07-02 10:47:33,870 UTC [14868] INFO esmvalcore._task:418 To re-run this diagnostic script, run: cd /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /conda/esmvaltool/2.0.0b4/bin/python /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2020-07-02 10:47:40,911 UTC [14868] INFO esmvalcore._task:114 Maximum memory used (estimate): 0.3 GB 2020-07-02 10:47:40,912 UTC [14868] INFO esmvalcore._task:116 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2020-07-02 10:47:40,913 UTC [14868] DEBUG esmvalcore._task:506 Script ocean/diagnostic_timeseries.py completed successfully 2020-07-02 10:47:40,913 UTC [14868] WARNING esmvalcore._task:519 No provenance information was written to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2020-07-02 10:47:40,913 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries (priority 6) in 0:00:07.048931 2020-07-02 10:47:40,914 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_no_obs/chl in process [14868] 2020-07-02 10:47:40,918 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:40,918 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:40,918 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:40,918 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'}) 2020-07-02 10:47:40,918 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:40,919 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:40,919 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:41,457 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:41,458 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:41,533 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:41,534 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:41,535 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:41,536 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'chl', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:41,609 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:41,611 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:41,652 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:41,653 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:41,653 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:41,655 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:41,655 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:43,297 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:43,298 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:43,298 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:43,299 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:43,299 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'chl', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:43,300 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:43,300 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}) 2020-07-02 10:47:43,301 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:43,315 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:43,316 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}) 2020-07-02 10:47:43,319 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_no_obs/chl (priority 7) in 0:00:02.405636 2020-07-02 10:47:43,320 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_no_obs/dfe in process [14868] 2020-07-02 10:47:43,323 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:43,323 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:47:43,323 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:43,323 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'dfe', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'}) 2020-07-02 10:47:43,324 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:43,324 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:43,324 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:43,801 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:43,802 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'dfe', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:43,877 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:43,878 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:43,878 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:43,880 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_dissolved_iron_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: dissolved iron in sea water is meant to include both Fe2+ and Fe3+ ions... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i110/1e6 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'dfe', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:43,952 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:43,954 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_dissolved_iron_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: dissolved iron in sea water is meant to include both Fe2+ and Fe3+ ions... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i110/1e6 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:43,996 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:43,998 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_dissolved_iron_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: dissolved iron in sea water is meant to include both Fe2+ and Fe3+ ions... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i110/1e6 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'dfe', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:43,999 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:44,001 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(mole_concentration_of_dissolved_iron_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: dissolved iron in sea water is meant to include both Fe2+ and Fe3+ ions... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i110/1e6 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:44,001 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:45,598 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:45,598 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:47:45,598 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:45,598 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:45,598 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:45,598 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:45,599 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:45,599 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:47:45,599 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:45,599 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_dissolved_iron_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: dissolved iron in sea water is meant to include both Fe2+ and Fe3+ ions... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i110/1e6 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'dfe', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:45,600 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:45,600 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}) 2020-07-02 10:47:45,602 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2020-07-02 10:47:45,616 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:45,616 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}) 2020-07-02 10:47:45,620 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_no_obs/dfe (priority 8) in 0:00:02.300074 2020-07-02 10:47:45,620 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_no_obs/talk in process [14868] 2020-07-02 10:47:45,623 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'volume_statistics'] 2020-07-02 10:47:45,623 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:45,623 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:45,624 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'}) 2020-07-02 10:47:45,624 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:45,624 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:45,624 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:46,101 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:46,102 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:46,176 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:46,177 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:46,177 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:46,179 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'talk', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:46,251 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:46,253 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:46,294 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:46,295 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:46,296 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step volume_statistics 2020-07-02 10:47:46,297 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running volume_statistics(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:46,298 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:47,843 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:47,843 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:47,844 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:47,844 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 10.0 m, bound=(0.0, 20.0) m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: depth, longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'talk', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:47,844 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:47,845 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}) 2020-07-02 10:47:47,846 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:47,861 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:47,861 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}) 2020-07-02 10:47:47,864 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_no_obs/talk (priority 9) in 0:00:02.244076 2020-07-02 10:47:47,864 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_no_obs/volcello in process [14868] 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data'] 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed'}) 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'callback': }) 2020-07-02 10:47:47,867 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:47:47,881 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:47,882 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:47,883 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:47,883 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:47,884 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:47,885 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'volcello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:47,885 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:47,886 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'volcello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:47,886 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:47,887 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(ocean_volume / (m3) (depth: 40; latitude: 216; longitude: 360) Dimension coordinates: depth x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 comment: grid-cell volume ca. 2000. contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='volcello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'volcello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:47,887 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:47,887 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'}) 2020-07-02 10:47:47,888 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc 2020-07-02 10:47:47,987 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:47,987 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_volume_average_no_obs/volcello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_volcello_fixed']}) 2020-07-02 10:47:47,991 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_no_obs/volcello (priority 10) in 0:00:00.126778 2020-07-02 10:47:47,991 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries in process [14868] 2020-07-02 10:47:47,995 UTC [14868] INFO esmvalcore._task:406 Running command ['/conda/esmvaltool/2.0.0b4/bin/python', '/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml'] 2020-07-02 10:47:47,996 UTC [14868] DEBUG esmvalcore._task:407 in environment {'MPLBACKEND': 'Agg'} 2020-07-02 10:47:47,996 UTC [14868] DEBUG esmvalcore._task:409 in current working directory: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2020-07-02 10:47:47,996 UTC [14868] INFO esmvalcore._task:410 Writing output to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2020-07-02 10:47:47,996 UTC [14868] INFO esmvalcore._task:411 Writing plots to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2020-07-02 10:47:47,996 UTC [14868] INFO esmvalcore._task:412 Writing log to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/log.txt 2020-07-02 10:47:47,996 UTC [14868] INFO esmvalcore._task:418 To re-run this diagnostic script, run: cd /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries; MPLBACKEND="Agg" /conda/esmvaltool/2.0.0b4/bin/python /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml 2020-07-02 10:47:52,027 UTC [14868] INFO esmvalcore._task:114 Maximum memory used (estimate): 0.2 GB 2020-07-02 10:47:52,028 UTC [14868] INFO esmvalcore._task:116 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2020-07-02 10:47:52,028 UTC [14868] DEBUG esmvalcore._task:506 Script ocean/diagnostic_timeseries.py completed successfully 2020-07-02 10:47:52,029 UTC [14868] WARNING esmvalcore._task:519 No provenance information was written to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diagnostic_provenance.yml 2020-07-02 10:47:52,029 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries (priority 11) in 0:00:04.037641 2020-07-02 10:47:52,029 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_no_obs/talk in process [14868] 2020-07-02 10:47:52,033 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:47:52,033 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:52,033 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:52,034 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'}) 2020-07-02 10:47:52,034 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:52,034 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:52,034 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:52,054 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:52,055 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:52,130 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:52,131 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:52,132 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:52,135 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'talk', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:52,210 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:52,212 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:52,254 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:52,255 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'talk', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:52,256 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:47:52,257 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:47:52,729 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:47:52,730 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:52,731 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:52,733 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (4, 216, 360) 2020-07-02 10:47:52,740 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:52,740 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:52,741 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:52,741 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:52,742 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_alkalinity_expressed_as_mole_equivalent / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: total alkalinity equivalent concentration (including carbonate, nitrogen,... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i104/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'talk', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:52,742 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:52,742 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}) 2020-07-02 10:47:52,744 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2020-07-02 10:47:52,760 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:52,761 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}) 2020-07-02 10:47:52,764 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_no_obs/talk (priority 12) in 0:00:00.735232 2020-07-02 10:47:52,765 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_no_obs/intpp in process [14868] 2020-07-02 10:47:52,768 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'area_statistics'] 2020-07-02 10:47:52,768 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:47:52,768 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:52,769 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'intpp', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed'}) 2020-07-02 10:47:52,769 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:52,769 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc, {'callback': }) 2020-07-02 10:47:52,769 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2020-07-02 10:47:53,418 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:53,419 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'intpp', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:54,462 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:54,462 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:54,463 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:54,464 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(net_primary_mole_productivity_of_carbon_by_phytoplankton / (mol m-2 s-1) (time: 553; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: Vertically integrated total primary (organic carbon) production by phytoplankton.... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s30i400*9.63703e-07 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'intpp', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:55,543 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:55,544 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(net_primary_mole_productivity_of_carbon_by_phytoplankton / (mol m-2 s-1) (time: 553; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: Vertically integrated total primary (organic carbon) production by phytoplankton.... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s30i400*9.63703e-07 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:56,078 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:56,080 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(net_primary_mole_productivity_of_carbon_by_phytoplankton / (mol m-2 s-1) (time: 48; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: Vertically integrated total primary (organic carbon) production by phytoplankton.... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s30i400*9.63703e-07 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'intpp', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:56,080 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:47:56,082 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(net_primary_mole_productivity_of_carbon_by_phytoplankton / (mol m-2 s-1) (time: 48; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: Vertically integrated total primary (organic carbon) production by phytoplankton.... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s30i400*9.63703e-07 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:56,082 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:56,085 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (48, 216, 360) 2020-07-02 10:47:56,166 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:56,167 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:47:56,167 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:56,168 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(net_primary_mole_productivity_of_carbon_by_phytoplankton / (mol m-2 s-1) (time: 48) Dimension coordinates: time x Scalar coordinates: latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: Vertically integrated total primary (organic carbon) production by phytoplankton.... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s30i400*9.63703e-07 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'intpp', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:47:56,168 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:56,169 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}) 2020-07-02 10:47:56,169 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2020-07-02 10:47:56,292 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:56,292 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}) 2020-07-02 10:47:56,298 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_no_obs/intpp (priority 13) in 0:00:03.532836 2020-07-02 10:47:56,298 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_no_obs/chl in process [14868] 2020-07-02 10:47:56,303 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:47:56,303 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:56,303 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:56,304 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'}) 2020-07-02 10:47:56,304 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:56,304 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:47:56,304 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:47:56,351 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:56,352 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:56,424 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:56,425 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:56,426 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:56,427 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'chl', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:56,497 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:47:56,498 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:47:56,549 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:56,551 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'chl', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:56,551 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:47:56,553 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:47:56,932 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:47:56,933 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:47:56,933 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:47:56,935 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (4, 216, 360) 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({}, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:47:56,941 UTC [14868] INFO esmvalcore.preprocessor._multimodel:342 Single dataset in list: will not compute statistics. 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:56,941 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:56,942 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water / (kg m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 comment: sum of chlorophyll from all phytoplankton group concentrations. In most... contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i106+m02s00i111)*1.98915625E-06 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'chl', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:47:56,943 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:56,943 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}) 2020-07-02 10:47:56,944 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2020-07-02 10:47:56,965 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:56,965 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}) 2020-07-02 10:47:56,969 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_no_obs/chl (priority 14) in 0:00:00.670961 2020-07-02 10:47:56,969 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_no_obs/areacello in process [14868] 2020-07-02 10:47:56,972 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data'] 2020-07-02 10:47:56,972 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:47:56,972 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:47:56,972 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'}) 2020-07-02 10:47:56,972 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:47:56,973 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'callback': }) 2020-07-02 10:47:56,973 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:47:56,982 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:47:56,983 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:56,983 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:47:56,984 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:47:56,984 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:47:56,985 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'areacello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:56,985 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:47:56,986 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:56,986 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:47:56,987 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'areacello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:47:56,987 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:47:56,987 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}) 2020-07-02 10:47:57,010 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:47:57,026 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:47:57,026 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}) 2020-07-02 10:47:57,029 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_no_obs/areacello (priority 15) in 0:00:00.060191 2020-07-02 10:47:57,030 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries in process [14868] 2020-07-02 10:47:57,035 UTC [14868] INFO esmvalcore._task:406 Running command ['/conda/esmvaltool/2.0.0b4/bin/python', '/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml'] 2020-07-02 10:47:57,035 UTC [14868] DEBUG esmvalcore._task:407 in environment {'MPLBACKEND': 'Agg'} 2020-07-02 10:47:57,035 UTC [14868] DEBUG esmvalcore._task:409 in current working directory: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2020-07-02 10:47:57,035 UTC [14868] INFO esmvalcore._task:410 Writing output to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2020-07-02 10:47:57,035 UTC [14868] INFO esmvalcore._task:411 Writing plots to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2020-07-02 10:47:57,035 UTC [14868] INFO esmvalcore._task:412 Writing log to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/log.txt 2020-07-02 10:47:57,035 UTC [14868] INFO esmvalcore._task:418 To re-run this diagnostic script, run: cd /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /conda/esmvaltool/2.0.0b4/bin/python /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml 2020-07-02 10:48:01,070 UTC [14868] INFO esmvalcore._task:114 Maximum memory used (estimate): 0.2 GB 2020-07-02 10:48:01,070 UTC [14868] INFO esmvalcore._task:116 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2020-07-02 10:48:01,071 UTC [14868] DEBUG esmvalcore._task:506 Script ocean/diagnostic_timeseries.py completed successfully 2020-07-02 10:48:01,071 UTC [14868] WARNING esmvalcore._task:519 No provenance information was written to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2020-07-02 10:48:01,071 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries (priority 16) in 0:00:04.041419 2020-07-02 10:48:01,071 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/thetao in process [14868] 2020-07-02 10:48:01,080 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:48:01,080 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:48:01,081 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:01,081 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'}) 2020-07-02 10:48:01,081 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:01,081 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'callback': }) 2020-07-02 10:48:01,081 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:48:01,856 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:01,857 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:01,974 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:01,975 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:01,976 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:01,977 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_potential_temperature / (K) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:02,090 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:02,092 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_potential_temperature / (K) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:02,147 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:02,148 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_potential_temperature / (K) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:02,149 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:02,150 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(sea_water_potential_temperature / (K) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:07,309 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:07,311 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(sea_water_potential_temperature / (K) (time: 48; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'operator': 'mean'}) 2020-07-02 10:48:07,311 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:07,314 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (48, 216, 360) 2020-07-02 10:48:07,370 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:48:07,370 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:07,370 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'}) 2020-07-02 10:48:07,371 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:07,371 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc, {'callback': }) 2020-07-02 10:48:07,371 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2020-07-02 10:48:07,434 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:07,435 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,436 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:07,436 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:07,437 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:07,438 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,439 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:07,440 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:07,446 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:48:07,446 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:07,447 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'thetao', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,447 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:07,449 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:07,454 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:07,455 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(sea_water_potential_temperature / (K) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:48:07,455 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:07,457 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (1, 180, 360) 2020-07-02 10:48:07,474 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:48:07,475 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:48:07,475 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:48:07,475 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:48:07,475 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:48:07,517 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:48:07,518 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:48:07,518 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:48:07,518 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:07,519 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_potential_temperature / (K) (time: 48) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i101 + 273.15 parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,519 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:07,519 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}) 2020-07-02 10:48:07,521 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2020-07-02 10:48:07,534 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:07,535 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}) 2020-07-02 10:48:07,535 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:48:07,535 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:07,536 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_potential_temperature / (K) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'thetao', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,536 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:07,536 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}) 2020-07-02 10:48:07,536 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2020-07-02 10:48:07,576 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:07,576 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}) 2020-07-02 10:48:07,582 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/thetao (priority 17) in 0:00:06.510435 2020-07-02 10:48:07,582 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/so in process [14868] 2020-07-02 10:48:07,589 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:48:07,589 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:48:07,589 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:07,589 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'}) 2020-07-02 10:48:07,589 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:07,590 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc, {'callback': }) 2020-07-02 10:48:07,590 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2020-07-02 10:48:07,655 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:07,656 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,657 UTC [14868] WARNING esmvalcore.cmor.check:196 There were warnings in variable so: Variable so units 0.001 will be converted to psu 2020-07-02 10:48:07,657 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:07,657 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:07,658 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:07,659 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,660 UTC [14868] WARNING esmvalcore.cmor.check:196 There were warnings in variable so: Variable so units 0.001 will be converted to psu 2020-07-02 10:48:07,660 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:07,661 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:07,666 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:48:07,666 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:07,668 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:07,669 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:07,671 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:07,676 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:07,677 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(sea_water_salinity / (1.0) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:48:07,677 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:07,679 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (1, 180, 360) 2020-07-02 10:48:07,691 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:48:07,691 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:07,691 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'}) 2020-07-02 10:48:07,691 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:07,692 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc, {'callback': }) 2020-07-02 10:48:07,692 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2020-07-02 10:48:08,247 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:08,248 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:08,366 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:08,367 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:08,367 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:08,369 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(sea_water_salinity / (1.0) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:08,484 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:08,485 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(sea_water_salinity / (1.0) (time: 73; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:08,547 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:08,548 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(sea_water_salinity / (1.0) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'so', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:08,548 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:08,550 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(sea_water_salinity / (1.0) (time: 48; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:13,468 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:13,470 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(sea_water_salinity / (1.0) (time: 48; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time, {'operator': 'mean'}) 2020-07-02 10:48:13,470 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:13,472 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (48, 216, 360) 2020-07-02 10:48:13,552 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:48:13,553 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:48:13,553 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:48:13,553 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:48:13,553 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:48:13,594 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:48:13,594 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:48:13,594 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:48:13,594 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:13,595 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_salinity / (1.0) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Omon modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:13,595 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:13,595 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}) 2020-07-02 10:48:13,596 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2020-07-02 10:48:13,709 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:13,710 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}) 2020-07-02 10:48:13,710 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:48:13,710 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:13,711 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(sea_water_salinity / (1.0) (time: 48) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocean_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: mon initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: m02s00i102*1000.+35. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Omon (27 April 2011) 340eddd4fd838d90fa9ffe1345ecbd73 title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Omon', 'short_name': 'so', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:13,711 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:13,711 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}) 2020-07-02 10:48:13,711 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2020-07-02 10:48:13,725 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:13,725 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}) 2020-07-02 10:48:13,730 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/so (priority 18) in 0:00:06.148350 2020-07-02 10:48:13,731 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/no3 in process [14868] 2020-07-02 10:48:13,739 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:48:13,739 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:48:13,739 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:13,739 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'}) 2020-07-02 10:48:13,740 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:13,740 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc, {'callback': }) 2020-07-02 10:48:13,740 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2020-07-02 10:48:13,790 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:13,791 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:13,792 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:13,792 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:13,793 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:13,794 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:13,795 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:13,796 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:13,801 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:48:13,801 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:13,803 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:13,803 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:13,804 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:13,809 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:13,811 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:48:13,811 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:13,812 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (1, 180, 360) 2020-07-02 10:48:13,825 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:48:13,825 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:13,825 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'}) 2020-07-02 10:48:13,825 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:13,826 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:48:13,826 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:48:14,162 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:14,163 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:14,235 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:14,236 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:14,236 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:14,238 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:14,308 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:14,310 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:14,351 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:14,352 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'no3', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:14,353 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:14,354 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:15,007 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:15,008 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:48:15,009 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:15,010 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (4, 216, 360) 2020-07-02 10:48:15,018 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:48:15,019 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:48:15,019 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:48:15,019 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:48:15,019 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:48:15,025 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:48:15,025 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:48:15,025 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:48:15,025 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:15,026 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,026 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:15,026 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}) 2020-07-02 10:48:15,027 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2020-07-02 10:48:15,071 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:15,071 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}) 2020-07-02 10:48:15,071 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:48:15,071 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:15,072 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: (m02s00i105-m02s00i118)/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'no3', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,072 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:15,072 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}) 2020-07-02 10:48:15,073 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2020-07-02 10:48:15,086 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:15,086 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}) 2020-07-02 10:48:15,092 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/no3 (priority 19) in 0:00:01.360819 2020-07-02 10:48:15,092 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/o2 in process [14868] 2020-07-02 10:48:15,097 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:48:15,097 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:48:15,097 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:15,097 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'}) 2020-07-02 10:48:15,098 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:15,098 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc, {'callback': }) 2020-07-02 10:48:15,098 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2020-07-02 10:48:15,139 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:15,140 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,141 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:15,142 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:15,143 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:15,144 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,144 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:15,146 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:15,151 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:48:15,151 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:15,152 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,152 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:15,154 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:15,159 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:15,160 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:48:15,160 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:15,162 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (1, 180, 360) 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'}) 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:48:15,174 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:48:15,460 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:15,461 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,536 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:15,537 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:15,537 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:15,539 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,611 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:15,612 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:15,655 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:15,657 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'o2', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:15,657 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:15,658 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:16,134 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:16,135 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:48:16,136 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:16,137 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (4, 216, 360) 2020-07-02 10:48:16,143 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:48:16,143 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:48:16,143 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:48:16,144 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:48:16,144 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:48:16,150 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:48:16,150 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:48:16,150 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:48:16,150 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:16,151 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:16,151 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:16,151 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}) 2020-07-02 10:48:16,152 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2020-07-02 10:48:16,187 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:16,187 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}) 2020-07-02 10:48:16,187 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:48:16,187 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:16,188 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... invalid_standard_name: mole_concentration_of_molecular_oxygen_in_sea_water mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i115/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'o2', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:16,189 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:16,189 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}) 2020-07-02 10:48:16,189 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2020-07-02 10:48:16,202 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:16,202 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}) 2020-07-02 10:48:16,208 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/o2 (priority 20) in 0:00:01.115844 2020-07-02 10:48:16,208 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/si in process [14868] 2020-07-02 10:48:16,213 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'extract_levels', 'area_statistics'] 2020-07-02 10:48:16,213 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:48:16,213 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:16,213 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'}) 2020-07-02 10:48:16,214 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:16,214 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc, {'callback': }) 2020-07-02 10:48:16,214 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2020-07-02 10:48:16,533 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:16,534 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:16,607 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:16,608 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:16,609 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:16,610 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:16,700 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:16,702 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 46; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'start_year': 2001, 'end_year': 2005, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:16,775 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:16,777 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:16,777 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:16,778 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4; depth: 40; latitude: 216; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:17,260 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:17,261 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4; latitude: 216; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 m Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area, {'operator': 'mean'}) 2020-07-02 10:48:17,261 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:17,263 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (4, 216, 360) 2020-07-02 10:48:17,269 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:48:17,269 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:17,270 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'}) 2020-07-02 10:48:17,270 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:17,270 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc, {'callback': }) 2020-07-02 10:48:17,270 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS2980K/NTK-data/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2020-07-02 10:48:17,321 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:17,322 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:17,323 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:17,324 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:17,324 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:17,326 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:17,326 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_time 2020-07-02 10:48:17,328 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_time(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'start_year': 2000, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2020-07-02 10:48:17,332 UTC [14868] DEBUG esmvalcore.preprocessor._time:104 No change needed to time. 2020-07-02 10:48:17,333 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:17,334 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'project': 'OBS', 'dataset': 'WOA', 'short_name': 'si', 'mip': 'Oyr', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:17,334 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step extract_levels 2020-07-02 10:48:17,336 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running extract_levels(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'levels': [0.0], 'scheme': 'linear_horizontal_extrapolate_vertical'}) 2020-07-02 10:48:17,340 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step area_statistics 2020-07-02 10:48:17,342 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running area_statistics(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time, {'operator': 'mean'}) 2020-07-02 10:48:17,342 UTC [14868] WARNING py.warnings:109 /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. warnings.warn("Using DEFAULT_SPHERICAL_EARTH_RADIUS.") 2020-07-02 10:48:17,343 UTC [14868] INFO esmvalcore.preprocessor._area:261 Calculated grid area shape: (1, 180, 360) 2020-07-02 10:48:17,355 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['multi_model_statistics'] 2020-07-02 10:48:17,356 UTC [14868] DEBUG esmvalcore.preprocessor:358 Applying multi_model_statistics to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:48:17,356 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step multi_model_statistics 2020-07-02 10:48:17,356 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running multi_model_statistics({, }, {'span': 'overlap', 'statistics': ['mean'], 'output_products': {'mean': }}) 2020-07-02 10:48:17,356 UTC [14868] DEBUG esmvalcore.preprocessor._multimodel:340 Multimodel statistics: computing: ['mean'] 2020-07-02 10:48:17,362 UTC [14868] INFO esmvalcore.preprocessor._multimodel:349 Time overlap between cubes is none or a single point.check datasets: will not compute statistics. 2020-07-02 10:48:17,362 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['cmor_check_data'] 2020-07-02 10:48:17,362 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:48:17,362 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:17,363 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 4) Dimension coordinates: time x Scalar coordinates: depth: 0.0 m latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 179.5 degrees_east, bound=(-0.5, 359.5) degrees_east Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_ocnBgchem_fx_HadGEM2-ES_historical_r0i0p0.nc... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk, john.hughes@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: yr initialization_method: 1 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocnBgchem original_name: mo: m02s00i114/1000. parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 references: Bellouin N. et al, (2007) Improved representation of aerosols for HadGEM2.... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table Oyr (27 April 2011) a816306750f284585dc77210f193f7bb title: HadGEM2-ES model output prepared for CMIP5 historical Cell methods: mean: time mean where sea: area mean: longitude, latitude, {'cmor_table': 'CMIP5', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:17,363 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:17,363 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}) 2020-07-02 10:48:17,364 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2020-07-02 10:48:17,377 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:17,378 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}) 2020-07-02 10:48:17,378 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:48:17,378 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:17,379 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1) Dimension coordinates: time x Scalar coordinates: depth: 0.0 meters, bound=(-2.5, 2.5) meters latitude: 0.0 degrees_north, bound=(-90.0, 90.0) degrees_north longitude: 180.0 degrees_east, bound=(0.0, 360.0) degrees_east Attributes: Conventions: CF-1.5 comment: host: unknown host mip: Oyr modeling_realm: clim project_id: CMIP5 reference: Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013. source: https://data.nodc.noaa.gov/woa/WOA13/DATAv2/ tier: 2 title: WOA data reformatted for ESMValTool v2.0a2 user: hca063 version: 2013v2 Cell methods: mean: area mean: depth mean: time mean: longitude, latitude, {'cmor_table': 'OBS', 'mip': 'Oyr', 'short_name': 'si', 'frequency': 'yr', 'check_level': }) 2020-07-02 10:48:17,379 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:17,379 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}) 2020-07-02 10:48:17,379 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2020-07-02 10:48:17,415 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:17,416 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}) 2020-07-02 10:48:17,421 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/si (priority 21) in 0:00:01.213090 2020-07-02 10:48:17,421 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/areacello in process [14868] 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data'] 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'}) 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc, {'callback': }) 2020-07-02 10:48:17,424 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2020-07-02 10:48:17,434 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:17,434 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:48:17,435 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step concatenate 2020-07-02 10:48:17,436 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running concatenate([], {}) 2020-07-02 10:48:17,436 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_metadata 2020-07-02 10:48:17,437 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_metadata(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'areacello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:48:17,437 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_data 2020-07-02 10:48:17,438 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_data(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'areacello', 'mip': 'fx', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:48:17,438 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cmor_check_data 2020-07-02 10:48:17,439 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cmor_check_data(cell_area / (m2) (latitude: 216; longitude: 360) Dimension coordinates: latitude x - longitude - x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: g... branch_time: 0.0 cmor_version: 2.7.1 contact: chris.d.jones@metoffice.gov.uk experiment: historical experiment_id: historical forcing: GHG, Oz, SA, LU, Sl, Vl, BC, OC, (GHG = CO2, N2O, CH4, CFCs) frequency: fx initialization_method: 0 institute_id: MOHC institution: Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK, (h... mo_runid: ajhoh model_id: HadGEM2-ES modeling_realm: ocean original_name: mo: Idl(func='areacello', args='', stashcode='m02s00i101') parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 0 product: output project_id: CMIP5 realization: 0 references: Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,... source: HadGEM2-ES (2009) atmosphere: HadGAM2 (N96L38); ocean: HadGOM2 (lat: 1.0-0.3... table_id: Table fx (12 January 2012) 31f8e82ffa2e23ae0de67d9bcd483d93 title: HadGEM2-ES model output prepared for CMIP5 historical, {'cmor_table': 'CMIP5', 'mip': 'fx', 'short_name': 'areacello', 'frequency': 'fx', 'check_level': }) 2020-07-02 10:48:17,439 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step save 2020-07-02 10:48:17,439 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running save([], {'compress': False, 'filename': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}) 2020-07-02 10:48:17,440 UTC [14868] DEBUG esmvalcore.preprocessor._io:170 Saving cubes [] to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2020-07-02 10:48:17,456 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step cleanup 2020-07-02 10:48:17,456 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running cleanup(['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'], {'remove': ['/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}) 2020-07-02 10:48:17,459 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/areacello (priority 22) in 0:00:00.038012 2020-07-02 10:48:17,459 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries in process [14868] 2020-07-02 10:48:17,465 UTC [14868] INFO esmvalcore._task:406 Running command ['/conda/esmvaltool/2.0.0b4/bin/python', '/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2020-07-02 10:48:17,465 UTC [14868] DEBUG esmvalcore._task:407 in environment {'MPLBACKEND': 'Agg'} 2020-07-02 10:48:17,465 UTC [14868] DEBUG esmvalcore._task:409 in current working directory: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:48:17,465 UTC [14868] INFO esmvalcore._task:410 Writing output to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:48:17,465 UTC [14868] INFO esmvalcore._task:411 Writing plots to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2020-07-02 10:48:17,465 UTC [14868] INFO esmvalcore._task:412 Writing log to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2020-07-02 10:48:17,465 UTC [14868] INFO esmvalcore._task:418 To re-run this diagnostic script, run: cd /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /conda/esmvaltool/2.0.0b4/bin/python /conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2020-07-02 10:48:24,515 UTC [14868] INFO esmvalcore._task:114 Maximum memory used (estimate): 0.3 GB 2020-07-02 10:48:24,516 UTC [14868] INFO esmvalcore._task:116 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2020-07-02 10:48:24,516 UTC [14868] DEBUG esmvalcore._task:506 Script ocean/diagnostic_timeseries.py completed successfully 2020-07-02 10:48:24,517 UTC [14868] WARNING esmvalcore._task:519 No provenance information was written to /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2020-07-02 10:48:24,517 UTC [14868] INFO esmvalcore._task:241 Successfully completed task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries (priority 23) in 0:00:07.057197 2020-07-02 10:48:24,517 UTC [14868] INFO esmvalcore._task:236 Starting task diag_timeseries_scalars/mfo in process [14868] 2020-07-02 10:48:24,520 UTC [14868] DEBUG esmvalcore.preprocessor:416 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'cmor_check_data'] 2020-07-02 10:48:24,520 UTC [14868] DEBUG esmvalcore.preprocessor:423 Applying single-model steps to PreprocessorFile: /projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2020-07-02 10:48:24,520 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_file 2020-07-02 10:48:24,520 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_file(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc, {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'mfo', 'mip': 'Omon', 'output_dir': '/projects/NS9252K/share/tomast/test_ipcc_node/esmvaltool_output/recipe_ocean_bgc_20200702_104638/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed'}) 2020-07-02 10:48:24,521 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step load 2020-07-02 10:48:24,521 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running load(/projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc, {'callback': }) 2020-07-02 10:48:24,521 UTC [14868] DEBUG esmvalcore.preprocessor._io:57 Loading: /projects/NS9252K/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/v20110916/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2020-07-02 10:48:24,532 UTC [14868] DEBUG esmvalcore.preprocessor:230 Running preprocessor step fix_metadata 2020-07-02 10:48:24,532 UTC [14868] DEBUG esmvalcore.preprocessor:220 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'mfo', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:24,533 UTC [14868] ERROR esmvalcore.preprocessor:224 Failed to run fix_metadata([], {'project': 'CMIP5', 'dataset': 'HadGEM2-ES', 'short_name': 'mfo', 'mip': 'Omon', 'frequency': 'mon', 'check_level': }) 2020-07-02 10:48:24,795 UTC [14868] INFO esmvalcore._task:114 Maximum memory used (estimate): 4.6 GB 2020-07-02 10:48:24,796 UTC [14868] INFO esmvalcore._task:116 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2020-07-02 10:48:24,796 UTC [14868] ERROR esmvalcore._main:247 Program terminated abnormally, see stack trace below for more information Traceback (most recent call last): File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_main.py", line 242, in run conf = main(args) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_main.py", line 176, in main process_recipe(recipe_file=recipe, config_user=cfg) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_main.py", line 228, in process_recipe recipe.run() File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_recipe.py", line 1323, in run run_tasks(self.tasks, File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_task.py", line 604, in run_tasks _run_tasks_sequential(tasks) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_task.py", line 616, in _run_tasks_sequential task.run() File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_task.py", line 235, in run input_files.extend(task.run()) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/_task.py", line 239, in run self.output_files = self._run(input_files) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/preprocessor/__init__.py", line 426, in _run product.apply(step, self.debug) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/preprocessor/__init__.py", line 294, in apply self.cubes = preprocess(self.cubes, step, **self.settings[step]) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/preprocessor/__init__.py", line 236, in preprocess result.append(_run_preproc_function(function, items, settings)) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/preprocessor/__init__.py", line 222, in _run_preproc_function return function(items, **kwargs) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/fix.py", line 118, in fix_metadata cube = checker(cube).check_metadata() File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 121, in check_metadata self._check_coords() File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 397, in _check_coords self._check_coord(coordinate, coord, var_name) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 439, in _check_coord self._check_coord_values(cmor, coord, var_name) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 497, in _check_coord_values self._check_requested_values(coord, coord_info, var_name) File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 552, in _check_requested_values cmor_points = [float(val) for val in coord_info.requested] File "/conda/esmvaltool/2.0.0b4/lib/python3.8/site-packages/esmvalcore/cmor/check.py", line 552, in cmor_points = [float(val) for val in coord_info.requested] ValueError: could not convert string to float: 'barents_opening' 2020-07-02 10:48:24,799 UTC [14868] INFO esmvalcore._main:251 If you suspect this is a bug or need help, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues and attach the run/recipe_*.yml and run/main_log_debug.txt files from the output directory.