2019-07-09 08:39:53,695 UTC [1590] INFO esmvalcore._main:135 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Veronika Eyring (PI; DLR, Germany - veronika.eyring@dlr.de) Bouwe Andela (NLESC, Netherlands - b.andela@esciencecenter.nl) Bjoern Broetz (DLR, Germany - bjoern.broetz@dlr.de) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (NLESC, Netherlands - n.drost@esciencecenter.nl) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) For further help, please read the documentation at http://esmvaltool.readthedocs.io. Have fun! 2019-07-09 08:39:53,695 UTC [1590] INFO esmvalcore._main:137 Using config file /group_workspaces/jasmin2/cp4cds1/nperez/config-user.yml 2019-07-09 08:39:53,696 UTC [1590] INFO esmvalcore._main:138 Writing program log files to: /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/run/main_log.txt /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/run/main_log_debug.txt 2019-07-09 08:39:53,697 UTC [1590] INFO esmvalcore._main:171 Starting the Earth System Model Evaluation Tool v2.0.0b0 at time: 2019-07-09 08:39:53 UTC 2019-07-09 08:39:53,697 UTC [1590] INFO esmvalcore._main:173 ---------------------------------------------------------------------- 2019-07-09 08:39:53,697 UTC [1590] INFO esmvalcore._main:174 RECIPE = /group_workspaces/jasmin2/cp4cds1/nperez/ESMValTool/esmvaltool/recipes/recipe_modes_of_variability.yml 2019-07-09 08:39:53,697 UTC [1590] INFO esmvalcore._main:175 RUNDIR = /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/run 2019-07-09 08:39:53,698 UTC [1590] INFO esmvalcore._main:176 WORKDIR = /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/work 2019-07-09 08:39:53,698 UTC [1590] INFO esmvalcore._main:177 PREPROCDIR = /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc 2019-07-09 08:39:53,698 UTC [1590] INFO esmvalcore._main:178 PLOTDIR = /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/plots 2019-07-09 08:39:53,698 UTC [1590] INFO esmvalcore._main:179 ---------------------------------------------------------------------- 2019-07-09 08:39:53,698 UTC [1590] INFO esmvalcore._main:182 Running tasks using at most 8 processes 2019-07-09 08:39:53,699 UTC [1590] INFO esmvalcore._main:185 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. In that case, try reducing 'max_parallel_tasks' in your user configuration file. 2019-07-09 08:39:53,712 UTC [1590] DEBUG esmvalcore._recipe_checks:45 Checking recipe against schema /home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/recipe_schema.yml 2019-07-09 08:39:53,742 UTC [1590] DEBUG esmvalcore._recipe:833 Retrieving diagnostics from recipe 2019-07-09 08:39:53,742 UTC [1590] DEBUG esmvalcore._recipe:925 Populating list of variables for diagnostic weather_regime 2019-07-09 08:39:53,742 UTC [1590] DEBUG esmvalcore._config:178 Retrieving institutes for dataset bcc-csm1-1 2019-07-09 08:39:53,742 UTC [1590] DEBUG esmvalcore._config:178 Retrieving institutes for dataset bcc-csm1-1 2019-07-09 08:39:53,743 UTC [1590] DEBUG esmvalcore._recipe:951 Setting script for diagnostic weather_regime 2019-07-09 08:39:53,744 UTC [1590] INFO esmvalcore._recipe:1016 Creating tasks from recipe 2019-07-09 08:39:53,744 UTC [1590] INFO esmvalcore._recipe:1020 Creating tasks for diagnostic weather_regime 2019-07-09 08:39:53,744 UTC [1590] INFO esmvalcore._recipe:1025 Creating preprocessor task weather_regime/sic 2019-07-09 08:39:53,744 UTC [1590] INFO esmvalcore._recipe:751 Creating preprocessor 'preproc' task for variable 'sic' 2019-07-09 08:39:53,744 UTC [1590] DEBUG esmvalcore._recipe:99 If not present: adding keys from CMOR table to {'preprocessor': 'preproc', 'mip': 'OImon', 'variable_group': 'sic', 'short_name': 'sic', 'diagnostic': 'weather_regime', 'dataset': 'bcc-csm1-1', 'project': 'CMIP5', 'start_year': 1971, 'end_year': 2000, 'ensemble': 'r1i1p1', 'exp': 'historical', 'recipe_dataset_index': 0, 'cmor_table': 'CMIP5', 'institute': ['BCC']} 2019-07-09 08:39:53,744 UTC [1590] DEBUG esmvalcore._recipe:99 If not present: adding keys from CMOR table to {'preprocessor': 'preproc', 'mip': 'OImon', 'variable_group': 'sic', 'short_name': 'sic', 'diagnostic': 'weather_regime', 'dataset': 'bcc-csm1-1', 'project': 'CMIP5', 'start_year': 2020, 'end_year': 2075, 'ensemble': 'r1i1p1', 'exp': 'rcp85', 'recipe_dataset_index': 1, 'cmor_table': 'CMIP5', 'institute': ['BCC']} 2019-07-09 08:39:53,745 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,745 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,746 UTC [1590] DEBUG esmvalcore._data_finder:232 Looking for input files for variable sic of dataset bcc-csm1-1 2019-07-09 08:39:53,746 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,772 UTC [1590] DEBUG esmvalcore._data_finder:213 Found /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest 2019-07-09 08:39:53,788 UTC [1590] DEBUG esmvalcore._data_finder:216 Skipping non-existent /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/ocean/OImon/r1i1p1/sic/latest 2019-07-09 08:39:53,788 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,788 UTC [1590] DEBUG esmvalcore._data_finder:20 Looking for files matching ['sic_OImon_bcc-csm1-1_historical_r1i1p1_*.nc'] in ['/group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest'] 2019-07-09 08:39:53,816 UTC [1590] INFO esmvalcore._recipe:453 Using input files for variable sic of dataset bcc-csm1-1: /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest/sic_OImon_bcc-csm1-1_historical_r1i1p1_185001-201212.nc 2019-07-09 08:39:53,845 UTC [1590] DEBUG esmvalcore._data_finder:232 Looking for input files for variable sic of dataset bcc-csm1-1 2019-07-09 08:39:53,845 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,863 UTC [1590] DEBUG esmvalcore._data_finder:213 Found /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/rcp85/mon/seaIce/OImon/r1i1p1/sic/latest 2019-07-09 08:39:53,870 UTC [1590] DEBUG esmvalcore._data_finder:216 Skipping non-existent /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/rcp85/mon/ocean/OImon/r1i1p1/sic/latest 2019-07-09 08:39:53,870 UTC [1590] DEBUG esmvalcore._config:170 Retrieving CMIP5 configuration 2019-07-09 08:39:53,870 UTC [1590] DEBUG esmvalcore._data_finder:20 Looking for files matching ['sic_OImon_bcc-csm1-1_rcp85_r1i1p1_*.nc'] in ['/group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/rcp85/mon/seaIce/OImon/r1i1p1/sic/latest'] 2019-07-09 08:39:53,899 UTC [1590] INFO esmvalcore._recipe:453 Using input files for variable sic of dataset bcc-csm1-1: /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/rcp85/mon/seaIce/OImon/r1i1p1/sic/latest/sic_OImon_bcc-csm1-1_rcp85_r1i1p1_200601-209912.nc 2019-07-09 08:39:53,922 UTC [1590] INFO esmvalcore._recipe:667 PreprocessingTask weather_regime/sic created. It will create the files: /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_rcp85_r1i1p1_sic_2020-2075.nc /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_historical_r1i1p1_sic_1971-2000.nc 2019-07-09 08:39:53,922 UTC [1590] INFO esmvalcore._recipe:1037 Creating diagnostic task weather_regime/main 2019-07-09 08:39:53,932 UTC [1590] DEBUG esmvalcore._recipe:1001 Linking tasks for diagnostic weather_regime script main 2019-07-09 08:39:53,932 UTC [1590] DEBUG esmvalcore._recipe:1010 Pattern weather_regime/sic matches ['weather_regime/sic'] 2019-07-09 08:39:53,932 UTC [1590] INFO esmvalcore._recipe:1063 These tasks will be executed: weather_regime/main, weather_regime/sic 2019-07-09 08:39:53,936 UTC [1590] DEBUG esmvalcore._main:203 Recipe summary: DiagnosticTask: script: magic_bsc/weather_regime.r { 'EOFS': False, 'auxiliary_data_dir': '/group_workspaces/jasmin2/cp4cds1/nperez/ESMValTool/auxiliary_data', 'cluster_method': 'kmeans', 'detrend_order': 2, 'frequency': 'SON', 'log_level': 'info', 'max_data_filesize': 100, 'ncenters': 3, 'output_file_type': 'png', 'plot_dir': '/work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/plots/weather_regime/main', 'plot_type': 'polar', 'profile_diagnostic': False, 'recipe': 'recipe_modes_of_variability.yml', 'run_dir': '/work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/run/weather_regime/main', 'script': 'main', 'version': '2.0.0b0', 'work_dir': '/work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/work/weather_regime/main', 'write_netcdf': True, 'write_plots': True} settings: ancestors: PreprocessingTask: order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'regrid', 'extract_region', 'cmor_check_data', 'save', 'cleanup'] PreprocessorFile: /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_rcp85_r1i1p1_sic_2020-2075.nc PreprocessorFile: /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_historical_r1i1p1_sic_1971-2000.nc ancestors: None 2019-07-09 08:39:53,982 UTC [1590] INFO esmvalcore._task:620 Running 2 tasks using at most 8 processes 2019-07-09 08:39:53,990 UTC [1646] INFO esmvalcore._task:226 Starting task weather_regime/sic in process [1646] 2019-07-09 08:39:54,003 UTC [1646] DEBUG esmvalcore.preprocessor:384 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'extract_time', 'fix_data', 'regrid', 'extract_region', 'cmor_check_data'] 2019-07-09 08:39:54,003 UTC [1646] DEBUG esmvalcore.preprocessor:391 Applying single-model steps to PreprocessorFile: /work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_historical_r1i1p1_sic_1971-2000.nc 2019-07-09 08:39:54,004 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step fix_file 2019-07-09 08:39:54,005 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running fix_file(/group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest/sic_OImon_bcc-csm1-1_historical_r1i1p1_185001-201212.nc, {'project': 'CMIP5', 'dataset': 'bcc-csm1-1', 'short_name': 'sic', 'output_dir': '/work/scratch-nompiio/nperez/recipe_modes_of_variability_20190709_083953/preproc/weather_regime/sic/CMIP5_bcc-csm1-1_OImon_historical_r1i1p1_sic_1971-2000_fixed'}) 2019-07-09 08:39:54,030 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step load 2019-07-09 08:39:54,031 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running load(/group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest/sic_OImon_bcc-csm1-1_historical_r1i1p1_185001-201212.nc, {'callback': }) 2019-07-09 08:39:54,031 UTC [1646] DEBUG esmvalcore.preprocessor._io:55 Loading: /group_workspaces/jasmin2/cp4cds1/data/c3s-cmip5/output1/BCC/bcc-csm1-1/historical/mon/seaIce/OImon/r1i1p1/sic/latest/sic_OImon_bcc-csm1-1_historical_r1i1p1_185001-201212.nc 2019-07-09 08:39:54,073 UTC [1646] WARNING py.warnings:110 /home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/iris/fileformats/cf.py:798: UserWarning: Missing CF-netCDF measure variable 'areacello', referenced by netCDF variable 'sic' warnings.warn(message % (variable_name, nc_var_name)) 2019-07-09 08:39:54,083 UTC [1590] INFO esmvalcore._task:663 Progress: 1 tasks running or queued, 1 tasks waiting for ancestors, 0/2 done 2019-07-09 08:39:57,788 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step fix_metadata 2019-07-09 08:39:57,789 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running fix_metadata([], {'project': 'CMIP5', 'dataset': 'bcc-csm1-1', 'short_name': 'sic', 'cmor_table': 'CMIP5', 'mip': 'OImon', 'frequency': 'mon'}) 2019-07-09 08:40:04,332 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step concatenate 2019-07-09 08:40:04,333 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running concatenate([], {}) 2019-07-09 08:40:10,393 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step cmor_check_metadata 2019-07-09 08:40:10,397 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running cmor_check_metadata(sea_ice_area_fraction / (%) (time: 1956; grid_latitude: 232; grid_longitude: 360) Dimension coordinates: time x - - grid_latitude - x - grid_longitude - - x Auxiliary coordinates: day_of_month x - - day_of_year x - - month_number x - - year x - - latitude - x x longitude - x x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_seaIce_fx_bcc-csm1-1_historical_r0i0p0.nc... branch_time: 470.0 cmor_version: 2.5.6 comment: fraction of grid cell covered by sea ice. contact: Dr. Tongwen Wu (twwu@cma.gov.cn) experiment: historical experiment_id: historical forcing: Nat Ant GHG SD Oz Sl Vl SS Ds BC OC frequency: mon initialization_method: 1 institute_id: BCC institution: Beijing Climate Center(BCC),China Meteorological Administration,China model_id: bcc-csm1-1 modeling_realm: seaIce ocean original_name: CN parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 source: bcc-csm1-1:atmosphere: BCC_AGCM2.1 (T42L26); land: BCC_AVIM1.0;ocean:... table_id: Table OImon (11 April 2011) c685058342b6615c12d34dc34a53e6fa title: bcc-csm1-1 model output prepared for CMIP5 historical Cell methods: mean: time, {'cmor_table': 'CMIP5', 'mip': 'OImon', 'short_name': 'sic', 'frequency': 'mon'}) 2019-07-09 08:40:13,799 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step extract_time 2019-07-09 08:40:13,802 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running extract_time(sea_ice_area_fraction / (%) (time: 1956; grid_latitude: 232; grid_longitude: 360) Dimension coordinates: time x - - grid_latitude - x - grid_longitude - - x Auxiliary coordinates: day_of_month x - - day_of_year x - - month_number x - - year x - - latitude - x x longitude - x x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_seaIce_fx_bcc-csm1-1_historical_r0i0p0.nc... branch_time: 470.0 cmor_version: 2.5.6 comment: fraction of grid cell covered by sea ice. contact: Dr. Tongwen Wu (twwu@cma.gov.cn) experiment: historical experiment_id: historical forcing: Nat Ant GHG SD Oz Sl Vl SS Ds BC OC frequency: mon initialization_method: 1 institute_id: BCC institution: Beijing Climate Center(BCC),China Meteorological Administration,China model_id: bcc-csm1-1 modeling_realm: seaIce ocean original_name: CN parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 source: bcc-csm1-1:atmosphere: BCC_AGCM2.1 (T42L26); land: BCC_AVIM1.0;ocean:... table_id: Table OImon (11 April 2011) c685058342b6615c12d34dc34a53e6fa title: bcc-csm1-1 model output prepared for CMIP5 historical Cell methods: mean: time, {'start_year': 1971, 'end_year': 2001, 'start_month': 1, 'end_month': 1, 'start_day': 1, 'end_day': 1}) 2019-07-09 08:40:16,365 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step fix_data 2019-07-09 08:40:16,368 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running fix_data(sea_ice_area_fraction / (%) (time: 360; grid_latitude: 232; grid_longitude: 360) Dimension coordinates: time x - - grid_latitude - x - grid_longitude - - x Auxiliary coordinates: day_of_month x - - day_of_year x - - month_number x - - year x - - latitude - x x longitude - x x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_seaIce_fx_bcc-csm1-1_historical_r0i0p0.nc... branch_time: 470.0 cmor_version: 2.5.6 comment: fraction of grid cell covered by sea ice. contact: Dr. Tongwen Wu (twwu@cma.gov.cn) experiment: historical experiment_id: historical forcing: Nat Ant GHG SD Oz Sl Vl SS Ds BC OC frequency: mon initialization_method: 1 institute_id: BCC institution: Beijing Climate Center(BCC),China Meteorological Administration,China model_id: bcc-csm1-1 modeling_realm: seaIce ocean original_name: CN parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 source: bcc-csm1-1:atmosphere: BCC_AGCM2.1 (T42L26); land: BCC_AVIM1.0;ocean:... table_id: Table OImon (11 April 2011) c685058342b6615c12d34dc34a53e6fa title: bcc-csm1-1 model output prepared for CMIP5 historical Cell methods: mean: time, {'project': 'CMIP5', 'dataset': 'bcc-csm1-1', 'short_name': 'sic', 'cmor_table': 'CMIP5', 'mip': 'OImon', 'frequency': 'mon'}) 2019-07-09 08:40:16,368 UTC [1646] DEBUG esmvalcore.preprocessor:197 Running preprocessor step regrid 2019-07-09 08:40:16,371 UTC [1646] DEBUG esmvalcore.preprocessor:187 Running regrid(sea_ice_area_fraction / (%) (time: 360; grid_latitude: 232; grid_longitude: 360) Dimension coordinates: time x - - grid_latitude - x - grid_longitude - - x Auxiliary coordinates: day_of_month x - - day_of_year x - - month_number x - - year x - - latitude - x x longitude - x x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_seaIce_fx_bcc-csm1-1_historical_r0i0p0.nc... branch_time: 470.0 cmor_version: 2.5.6 comment: fraction of grid cell covered by sea ice. contact: Dr. Tongwen Wu (twwu@cma.gov.cn) experiment: historical experiment_id: historical forcing: Nat Ant GHG SD Oz Sl Vl SS Ds BC OC frequency: mon initialization_method: 1 institute_id: BCC institution: Beijing Climate Center(BCC),China Meteorological Administration,China model_id: bcc-csm1-1 modeling_realm: seaIce ocean original_name: CN parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 source: bcc-csm1-1:atmosphere: BCC_AGCM2.1 (T42L26); land: BCC_AVIM1.0;ocean:... table_id: Table OImon (11 April 2011) c685058342b6615c12d34dc34a53e6fa title: bcc-csm1-1 model output prepared for CMIP5 historical Cell methods: mean: time, {'target_grid': '1x1', 'scheme': 'nearest'}) 2019-07-09 08:40:16,394 UTC [1646] ERROR esmvalcore.preprocessor:191 Failed to run regrid(sea_ice_area_fraction / (%) (time: 360; grid_latitude: 232; grid_longitude: 360) Dimension coordinates: time x - - grid_latitude - x - grid_longitude - - x Auxiliary coordinates: day_of_month x - - day_of_year x - - month_number x - - year x - - latitude - x x longitude - x x Attributes: Conventions: CF-1.4 associated_files: baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation gridspecFile: gridspec_seaIce_fx_bcc-csm1-1_historical_r0i0p0.nc... branch_time: 470.0 cmor_version: 2.5.6 comment: fraction of grid cell covered by sea ice. contact: Dr. Tongwen Wu (twwu@cma.gov.cn) experiment: historical experiment_id: historical forcing: Nat Ant GHG SD Oz Sl Vl SS Ds BC OC frequency: mon initialization_method: 1 institute_id: BCC institution: Beijing Climate Center(BCC),China Meteorological Administration,China model_id: bcc-csm1-1 modeling_realm: seaIce ocean original_name: CN parent_experiment: pre-industrial control parent_experiment_id: piControl parent_experiment_rip: r1i1p1 physics_version: 1 product: output project_id: CMIP5 realization: 1 source: bcc-csm1-1:atmosphere: BCC_AGCM2.1 (T42L26); land: BCC_AVIM1.0;ocean:... table_id: Table OImon (11 April 2011) c685058342b6615c12d34dc34a53e6fa title: bcc-csm1-1 model output prepared for CMIP5 historical Cell methods: mean: time, {'target_grid': '1x1', 'scheme': 'nearest'}) 2019-07-09 08:40:17,399 UTC [1590] ERROR esmvalcore._main:236 Program terminated abnormally, see stack trace below for more information multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/multiprocessing/pool.py", line 121, in worker result = (True, func(*args, **kwds)) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_task.py", line 671, in _run_task output_files = task.run() File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_task.py", line 227, in run self.output_files = self._run(input_files) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/__init__.py", line 394, in _run product.apply(step, self.debug) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/__init__.py", line 261, in apply self.cubes = preprocess(self.cubes, step, **self.settings[step]) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/__init__.py", line 206, in preprocess result.append(_run_preproc_function(function, item, settings)) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/__init__.py", line 189, in _run_preproc_function return function(items, **kwargs) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid.py", line 255, in regrid cube = esmpy_regrid(cube, target_grid, scheme) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid_esmpy.py", line 322, in regrid regridder = build_regridder(src_rep, dst_rep, method) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid_esmpy.py", line 221, in build_regridder regrid_method, mask_threshold) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid_esmpy.py", line 150, in build_regridder_2d src_field = cube_to_empty_field(src_rep) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid_esmpy.py", line 128, in cube_to_empty_field circular = is_lon_circular(lon) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/preprocessor/_regrid_esmpy.py", line 112, in is_lon_circular seam = (lon.bounds[1:-1, -1, (1, 2)] TypeError: 'NoneType' object is not subscriptable """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_main.py", line 228, in run conf = main(args) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_main.py", line 156, in main process_recipe(recipe_file=recipe, config_user=cfg) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_main.py", line 206, in process_recipe recipe.run() File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_recipe.py", line 1081, in run self.tasks, max_parallel_tasks=self._cfg['max_parallel_tasks']) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_task.py", line 596, in run_tasks _run_tasks_parallel(tasks, max_parallel_tasks) File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/site-packages/esmvalcore/_task.py", line 641, in _run_tasks_parallel task.output_files, updated_products = result.get() File "/home/users/nperez/miniconda3/envs/esmvaltool/lib/python3.7/multiprocessing/pool.py", line 657, in get raise self._value TypeError: 'NoneType' object is not subscriptable 2019-07-09 08:40:17,403 UTC [1590] INFO esmvalcore._main:238 If you suspect this is a bug or need help, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues and attach the run/recipe_*.yml and run/main_log_debug.txt files from the output directory.