DESCRIPTION

Package: aop
Type: Package
Title: Adverse Outcome Pathway Analysis
Version: 1.0.0
Date: 2015-08-25
Author: Lyle D. Burgoon <Lyle.D.Burgoon@usace.army.mil>
Maintainer: Lyle D. Burgoon <Lyle.D.Burgoon@usace.army.mil>
Description: Provides tools for analyzing adverse outcome pathways
    (AOPs) for pharmacological and toxicological research. Functionality
    includes the ability to perform causal network analysis of networks
    developed in and exported from Cytoscape or existing as R graph objects, and
    identifying the point of departure/screening/risk value from concentration-
    response data.
License: file LICENSE
Suggests:
    RUnit,
    knitr,
    rmarkdown,
    BiocGenerics
Imports:
    graph (>= 1.38.3),
    rjson (>= 0.2.14),
    igraph (>= 0.7.1),
    Rgraphviz (>= 2.10.0),
    methods,
    plyr (>= 1.8.3),
    ggplot2 (>= 1.0.1),
    splines
VignetteBuilder: knitr
LazyData: true
Collate:
    'aopCytoscape_Class.R'
    'aop_cytoscape_methods.R'
    'aop_graph_analysis.R'
    'bmr_Class.R'
    'pod_analysis.R'