From ed45a730244b3e6aa8b18ceea8aa6ef9b79a03bc Mon Sep 17 00:00:00 2001 From: Remco Bouckaert Date: Tue, 21 Jun 2022 10:08:04 +1200 Subject: [PATCH] move tests one directory up #834 --- test/test/{test => }/beast/BEASTTestCase.java | 0 test/test/{test => }/beast/beast2vs1/ClockModelTest.java | 0 test/test/{test => }/beast/beast2vs1/StarBEASTTest.java | 0 test/test/{test => }/beast/beast2vs1/SubstitutionModelTest.java | 0 test/test/{test => }/beast/beast2vs1/TaxonOrderTest.java | 0 test/test/{test => }/beast/beast2vs1/TestFramework.java | 0 test/test/{test => }/beast/beast2vs1/TipTimeTest.java | 0 test/test/{test => }/beast/beast2vs1/TreePriorTest.java | 0 test/test/{test => }/beast/beast2vs1/TreeTest.java | 0 .../test/{test => }/beast/beast2vs1/trace/DiscreteStatistics.java | 0 test/test/{test => }/beast/beast2vs1/trace/Expectation.java | 0 test/test/{test => }/beast/beast2vs1/trace/LogAnalyser.java | 0 test/test/{test => }/beast/beast2vs1/trace/LogFileTraces.java | 0 test/test/{test => }/beast/beast2vs1/trace/NumberFormatter.java | 0 test/test/{test => }/beast/beast2vs1/trace/TraceException.java | 0 test/test/{test => }/beast/beast2vs1/trace/TraceStatistics.java | 0 test/test/{test => }/beast/beast2vs1/trace/TraceType.java | 0 test/test/{test => }/beast/beast2vs1/trace/TrimLineReader.java | 0 .../beast/beast2vs1/tutorials/DivergenceDatingTest.java | 0 .../{test => }/beast/beast2vs1/tutorials/RateTutorialTest.java | 0 test/test/{test => }/beast/core/BEASTInterfaceTest.java | 0 .../{test => }/beast/core/InputForAnnotatedConstructorTest.java | 0 test/test/{test => }/beast/core/InputTest.java | 0 test/test/{test => }/beast/core/LoggerTest.java | 0 test/test/{test => }/beast/core/OperatorScheduleTest.java | 0 test/test/{test => }/beast/core/PrimitiveBeastObject.java | 0 test/test/{test => }/beast/core/PrimitiveInterface.java | 0 test/test/{test => }/beast/core/StateNodeInitialiserTest.java | 0 .../{test => }/beast/core/parameter/BooleanParameterListTest.java | 0 .../{test => }/beast/core/parameter/IntegerParameterListTest.java | 0 test/test/{test => }/beast/core/parameter/ParameterTest.java | 0 .../{test => }/beast/core/parameter/RealParameterListTest.java | 0 test/test/{test => }/beast/core/util/SumTest.java | 0 .../beast/evolution/alignment/FilteredAlignmentTest.java | 0 .../beast/evolution/alignment/UncertainAlignmentTest.java | 0 .../{test => }/beast/evolution/datatype/DataTypeDeEncodeTest.java | 0 .../test/{test => }/beast/evolution/datatype/IntegerDataTest.java | 0 .../{test => }/beast/evolution/likelihood/TreeLikelihoodTest.java | 0 .../evolution/operator/BactrianDeltaExchangeOperatorTest.java | 0 .../beast/evolution/operator/BactrianIntervalOperatorTest.java | 0 .../beast/evolution/operator/BactrianRandomWalkOperatorTest.java | 0 .../beast/evolution/operator/BactrianScaleOperatorTest.java | 0 .../beast/evolution/operator/BactrianUpDownOperatorTest.java | 0 .../beast/evolution/operator/CompoundParameterHelperTest.java | 0 .../beast/evolution/operator/DeltaExchangeOperatorTest.java | 0 .../{test => }/beast/evolution/operator/ExchangeOperatorTest.java | 0 .../beast/evolution/operator/IntRandomWalkOperatorTest.java | 0 .../beast/evolution/operator/KernelDistiburionTest.java | 0 .../{test => }/beast/evolution/operator/ScaleOperatorTest.java | 0 test/test/{test => }/beast/evolution/operator/TestOperator.java | 0 .../beast/evolution/operator/UniformIntegerOperatorTest.java | 0 .../beast/evolution/speciation/BirthDeathGernhard08ModelTest.java | 0 .../test/{test => }/beast/evolution/speciation/YuleModelTest.java | 0 .../beast/evolution/substmodel/BinaryCovarionModelTest.java | 0 test/test/{test => }/beast/evolution/substmodel/GTRTest.java | 0 .../beast/evolution/substmodel/GeneralSubstitutionModelTest.java | 0 test/test/{test => }/beast/evolution/substmodel/HKYTest.java | 0 test/test/{test => }/beast/evolution/tree/NodeTest.java | 0 test/test/{test => }/beast/evolution/tree/RandomTreeTest.java | 0 test/test/{test => }/beast/evolution/tree/TraitSetTest.java | 0 test/test/{test => }/beast/evolution/tree/TreeTest.java | 0 test/test/{test => }/beast/evolution/tree/TreeUtilsTest.java | 0 .../beast/evolution/tree/coalescent/BayesianSkylineTest.java | 0 .../beast/evolution/tree/coalescent/CoalescentTest.java | 0 test/test/{test => }/beast/integration/DependencyTest.java | 0 test/test/{test => }/beast/integration/DocumentationTest.java | 0 test/test/{test => }/beast/integration/InputTypeTest.java | 0 test/test/{test => }/beast/integration/XMLElementNameTest.java | 0 test/test/{test => }/beast/integration/XMLProducerTest.java | 0 test/test/{test => }/beast/math/distributions/GammaTest.java | 0 test/test/{test => }/beast/math/distributions/InvGammaTest.java | 0 .../beast/math/distributions/LaplaceDistributionTest.java | 0 .../beast/math/distributions/LogNormalDistributionModelTest.java | 0 test/test/{test => }/beast/math/distributions/MRCAPriorTest.java | 0 .../math/distributions/MeanOfParametricDistributionTest.java | 0 .../beast/math/distributions/NormalDistributionTest.java | 0 test/test/{test => }/beast/statistic/RPNCalculatorTest.java | 0 test/test/{test => }/beast/util/AnnotatedRunnableTestClass.java | 0 test/test/{test => }/beast/util/ClusterTreeTest.java | 0 test/test/{test => }/beast/util/NexusParserTest.java | 0 test/test/{test => }/beast/util/RandomizerTest.java | 0 test/test/{test => }/beast/util/TreeParserTest.java | 0 test/test/{test => }/beast/util/XMLParserTest.java | 0 test/test/{test => }/beast/util/XMLTest.java | 0 84 files changed, 0 insertions(+), 0 deletions(-) rename test/test/{test => }/beast/BEASTTestCase.java (100%) rename test/test/{test => }/beast/beast2vs1/ClockModelTest.java (100%) rename test/test/{test => }/beast/beast2vs1/StarBEASTTest.java (100%) rename test/test/{test => }/beast/beast2vs1/SubstitutionModelTest.java (100%) rename test/test/{test => }/beast/beast2vs1/TaxonOrderTest.java (100%) rename test/test/{test => }/beast/beast2vs1/TestFramework.java (100%) rename test/test/{test => }/beast/beast2vs1/TipTimeTest.java (100%) rename test/test/{test => }/beast/beast2vs1/TreePriorTest.java (100%) rename test/test/{test => }/beast/beast2vs1/TreeTest.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/DiscreteStatistics.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/Expectation.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/LogAnalyser.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/LogFileTraces.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/NumberFormatter.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/TraceException.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/TraceStatistics.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/TraceType.java (100%) rename test/test/{test => }/beast/beast2vs1/trace/TrimLineReader.java (100%) rename test/test/{test => }/beast/beast2vs1/tutorials/DivergenceDatingTest.java (100%) rename test/test/{test => }/beast/beast2vs1/tutorials/RateTutorialTest.java (100%) rename test/test/{test => }/beast/core/BEASTInterfaceTest.java (100%) rename test/test/{test => }/beast/core/InputForAnnotatedConstructorTest.java (100%) rename test/test/{test => }/beast/core/InputTest.java (100%) rename test/test/{test => }/beast/core/LoggerTest.java (100%) rename test/test/{test => }/beast/core/OperatorScheduleTest.java (100%) rename test/test/{test => }/beast/core/PrimitiveBeastObject.java (100%) rename test/test/{test => }/beast/core/PrimitiveInterface.java (100%) rename test/test/{test => }/beast/core/StateNodeInitialiserTest.java (100%) rename test/test/{test => }/beast/core/parameter/BooleanParameterListTest.java (100%) rename test/test/{test => }/beast/core/parameter/IntegerParameterListTest.java (100%) rename test/test/{test => }/beast/core/parameter/ParameterTest.java (100%) rename test/test/{test => }/beast/core/parameter/RealParameterListTest.java (100%) rename test/test/{test => }/beast/core/util/SumTest.java (100%) rename test/test/{test => }/beast/evolution/alignment/FilteredAlignmentTest.java (100%) rename test/test/{test => }/beast/evolution/alignment/UncertainAlignmentTest.java (100%) rename test/test/{test => }/beast/evolution/datatype/DataTypeDeEncodeTest.java (100%) rename test/test/{test => }/beast/evolution/datatype/IntegerDataTest.java (100%) rename test/test/{test => }/beast/evolution/likelihood/TreeLikelihoodTest.java (100%) rename test/test/{test => }/beast/evolution/operator/BactrianDeltaExchangeOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/BactrianIntervalOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/BactrianRandomWalkOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/BactrianScaleOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/BactrianUpDownOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/CompoundParameterHelperTest.java (100%) rename test/test/{test => }/beast/evolution/operator/DeltaExchangeOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/ExchangeOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/IntRandomWalkOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/KernelDistiburionTest.java (100%) rename test/test/{test => }/beast/evolution/operator/ScaleOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/operator/TestOperator.java (100%) rename test/test/{test => }/beast/evolution/operator/UniformIntegerOperatorTest.java (100%) rename test/test/{test => }/beast/evolution/speciation/BirthDeathGernhard08ModelTest.java (100%) rename test/test/{test => }/beast/evolution/speciation/YuleModelTest.java (100%) rename test/test/{test => }/beast/evolution/substmodel/BinaryCovarionModelTest.java (100%) rename test/test/{test => }/beast/evolution/substmodel/GTRTest.java (100%) rename test/test/{test => }/beast/evolution/substmodel/GeneralSubstitutionModelTest.java (100%) rename test/test/{test => }/beast/evolution/substmodel/HKYTest.java (100%) rename test/test/{test => }/beast/evolution/tree/NodeTest.java (100%) rename test/test/{test => }/beast/evolution/tree/RandomTreeTest.java (100%) rename test/test/{test => }/beast/evolution/tree/TraitSetTest.java (100%) rename test/test/{test => }/beast/evolution/tree/TreeTest.java (100%) rename test/test/{test => }/beast/evolution/tree/TreeUtilsTest.java (100%) rename test/test/{test => }/beast/evolution/tree/coalescent/BayesianSkylineTest.java (100%) rename test/test/{test => }/beast/evolution/tree/coalescent/CoalescentTest.java (100%) rename test/test/{test => }/beast/integration/DependencyTest.java (100%) rename test/test/{test => }/beast/integration/DocumentationTest.java (100%) rename test/test/{test => }/beast/integration/InputTypeTest.java (100%) rename test/test/{test => }/beast/integration/XMLElementNameTest.java (100%) rename test/test/{test => }/beast/integration/XMLProducerTest.java (100%) rename test/test/{test => }/beast/math/distributions/GammaTest.java (100%) rename test/test/{test => }/beast/math/distributions/InvGammaTest.java (100%) rename test/test/{test => }/beast/math/distributions/LaplaceDistributionTest.java (100%) rename test/test/{test => }/beast/math/distributions/LogNormalDistributionModelTest.java (100%) rename test/test/{test => }/beast/math/distributions/MRCAPriorTest.java (100%) rename test/test/{test => }/beast/math/distributions/MeanOfParametricDistributionTest.java (100%) rename test/test/{test => }/beast/math/distributions/NormalDistributionTest.java (100%) rename test/test/{test => }/beast/statistic/RPNCalculatorTest.java (100%) rename test/test/{test => }/beast/util/AnnotatedRunnableTestClass.java (100%) rename test/test/{test => }/beast/util/ClusterTreeTest.java (100%) rename test/test/{test => }/beast/util/NexusParserTest.java (100%) rename test/test/{test => }/beast/util/RandomizerTest.java (100%) rename test/test/{test => }/beast/util/TreeParserTest.java (100%) rename test/test/{test => }/beast/util/XMLParserTest.java (100%) rename test/test/{test => }/beast/util/XMLTest.java (100%) diff --git a/test/test/test/beast/BEASTTestCase.java b/test/test/beast/BEASTTestCase.java similarity index 100% rename from test/test/test/beast/BEASTTestCase.java rename to test/test/beast/BEASTTestCase.java diff --git a/test/test/test/beast/beast2vs1/ClockModelTest.java b/test/test/beast/beast2vs1/ClockModelTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/ClockModelTest.java rename to test/test/beast/beast2vs1/ClockModelTest.java diff --git a/test/test/test/beast/beast2vs1/StarBEASTTest.java b/test/test/beast/beast2vs1/StarBEASTTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/StarBEASTTest.java rename to test/test/beast/beast2vs1/StarBEASTTest.java diff --git a/test/test/test/beast/beast2vs1/SubstitutionModelTest.java b/test/test/beast/beast2vs1/SubstitutionModelTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/SubstitutionModelTest.java rename to test/test/beast/beast2vs1/SubstitutionModelTest.java diff --git a/test/test/test/beast/beast2vs1/TaxonOrderTest.java b/test/test/beast/beast2vs1/TaxonOrderTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/TaxonOrderTest.java rename to test/test/beast/beast2vs1/TaxonOrderTest.java diff --git a/test/test/test/beast/beast2vs1/TestFramework.java b/test/test/beast/beast2vs1/TestFramework.java similarity index 100% rename from test/test/test/beast/beast2vs1/TestFramework.java rename to test/test/beast/beast2vs1/TestFramework.java diff --git a/test/test/test/beast/beast2vs1/TipTimeTest.java b/test/test/beast/beast2vs1/TipTimeTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/TipTimeTest.java rename to test/test/beast/beast2vs1/TipTimeTest.java diff --git a/test/test/test/beast/beast2vs1/TreePriorTest.java b/test/test/beast/beast2vs1/TreePriorTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/TreePriorTest.java rename to test/test/beast/beast2vs1/TreePriorTest.java diff --git a/test/test/test/beast/beast2vs1/TreeTest.java b/test/test/beast/beast2vs1/TreeTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/TreeTest.java rename to test/test/beast/beast2vs1/TreeTest.java diff --git a/test/test/test/beast/beast2vs1/trace/DiscreteStatistics.java b/test/test/beast/beast2vs1/trace/DiscreteStatistics.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/DiscreteStatistics.java rename to test/test/beast/beast2vs1/trace/DiscreteStatistics.java diff --git a/test/test/test/beast/beast2vs1/trace/Expectation.java b/test/test/beast/beast2vs1/trace/Expectation.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/Expectation.java rename to test/test/beast/beast2vs1/trace/Expectation.java diff --git a/test/test/test/beast/beast2vs1/trace/LogAnalyser.java b/test/test/beast/beast2vs1/trace/LogAnalyser.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/LogAnalyser.java rename to test/test/beast/beast2vs1/trace/LogAnalyser.java diff --git a/test/test/test/beast/beast2vs1/trace/LogFileTraces.java b/test/test/beast/beast2vs1/trace/LogFileTraces.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/LogFileTraces.java rename to test/test/beast/beast2vs1/trace/LogFileTraces.java diff --git a/test/test/test/beast/beast2vs1/trace/NumberFormatter.java b/test/test/beast/beast2vs1/trace/NumberFormatter.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/NumberFormatter.java rename to test/test/beast/beast2vs1/trace/NumberFormatter.java diff --git a/test/test/test/beast/beast2vs1/trace/TraceException.java b/test/test/beast/beast2vs1/trace/TraceException.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/TraceException.java rename to test/test/beast/beast2vs1/trace/TraceException.java diff --git a/test/test/test/beast/beast2vs1/trace/TraceStatistics.java b/test/test/beast/beast2vs1/trace/TraceStatistics.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/TraceStatistics.java rename to test/test/beast/beast2vs1/trace/TraceStatistics.java diff --git a/test/test/test/beast/beast2vs1/trace/TraceType.java b/test/test/beast/beast2vs1/trace/TraceType.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/TraceType.java rename to test/test/beast/beast2vs1/trace/TraceType.java diff --git a/test/test/test/beast/beast2vs1/trace/TrimLineReader.java b/test/test/beast/beast2vs1/trace/TrimLineReader.java similarity index 100% rename from test/test/test/beast/beast2vs1/trace/TrimLineReader.java rename to test/test/beast/beast2vs1/trace/TrimLineReader.java diff --git a/test/test/test/beast/beast2vs1/tutorials/DivergenceDatingTest.java b/test/test/beast/beast2vs1/tutorials/DivergenceDatingTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/tutorials/DivergenceDatingTest.java rename to test/test/beast/beast2vs1/tutorials/DivergenceDatingTest.java diff --git a/test/test/test/beast/beast2vs1/tutorials/RateTutorialTest.java b/test/test/beast/beast2vs1/tutorials/RateTutorialTest.java similarity index 100% rename from test/test/test/beast/beast2vs1/tutorials/RateTutorialTest.java rename to test/test/beast/beast2vs1/tutorials/RateTutorialTest.java diff --git a/test/test/test/beast/core/BEASTInterfaceTest.java b/test/test/beast/core/BEASTInterfaceTest.java similarity index 100% rename from test/test/test/beast/core/BEASTInterfaceTest.java rename to test/test/beast/core/BEASTInterfaceTest.java diff --git a/test/test/test/beast/core/InputForAnnotatedConstructorTest.java b/test/test/beast/core/InputForAnnotatedConstructorTest.java similarity index 100% rename from test/test/test/beast/core/InputForAnnotatedConstructorTest.java rename to test/test/beast/core/InputForAnnotatedConstructorTest.java diff --git a/test/test/test/beast/core/InputTest.java b/test/test/beast/core/InputTest.java similarity index 100% rename from test/test/test/beast/core/InputTest.java rename to test/test/beast/core/InputTest.java diff --git a/test/test/test/beast/core/LoggerTest.java b/test/test/beast/core/LoggerTest.java similarity index 100% rename from test/test/test/beast/core/LoggerTest.java rename to test/test/beast/core/LoggerTest.java diff --git a/test/test/test/beast/core/OperatorScheduleTest.java b/test/test/beast/core/OperatorScheduleTest.java similarity index 100% rename from test/test/test/beast/core/OperatorScheduleTest.java rename to test/test/beast/core/OperatorScheduleTest.java diff --git a/test/test/test/beast/core/PrimitiveBeastObject.java b/test/test/beast/core/PrimitiveBeastObject.java similarity index 100% rename from test/test/test/beast/core/PrimitiveBeastObject.java rename to test/test/beast/core/PrimitiveBeastObject.java diff --git a/test/test/test/beast/core/PrimitiveInterface.java b/test/test/beast/core/PrimitiveInterface.java similarity index 100% rename from test/test/test/beast/core/PrimitiveInterface.java rename to test/test/beast/core/PrimitiveInterface.java diff --git a/test/test/test/beast/core/StateNodeInitialiserTest.java b/test/test/beast/core/StateNodeInitialiserTest.java similarity index 100% rename from test/test/test/beast/core/StateNodeInitialiserTest.java rename to test/test/beast/core/StateNodeInitialiserTest.java diff --git a/test/test/test/beast/core/parameter/BooleanParameterListTest.java b/test/test/beast/core/parameter/BooleanParameterListTest.java similarity index 100% rename from test/test/test/beast/core/parameter/BooleanParameterListTest.java rename to test/test/beast/core/parameter/BooleanParameterListTest.java diff --git a/test/test/test/beast/core/parameter/IntegerParameterListTest.java b/test/test/beast/core/parameter/IntegerParameterListTest.java similarity index 100% rename from test/test/test/beast/core/parameter/IntegerParameterListTest.java rename to test/test/beast/core/parameter/IntegerParameterListTest.java diff --git a/test/test/test/beast/core/parameter/ParameterTest.java b/test/test/beast/core/parameter/ParameterTest.java similarity index 100% rename from test/test/test/beast/core/parameter/ParameterTest.java rename to test/test/beast/core/parameter/ParameterTest.java diff --git a/test/test/test/beast/core/parameter/RealParameterListTest.java b/test/test/beast/core/parameter/RealParameterListTest.java similarity index 100% rename from test/test/test/beast/core/parameter/RealParameterListTest.java rename to test/test/beast/core/parameter/RealParameterListTest.java diff --git a/test/test/test/beast/core/util/SumTest.java b/test/test/beast/core/util/SumTest.java similarity index 100% rename from test/test/test/beast/core/util/SumTest.java rename to test/test/beast/core/util/SumTest.java diff --git a/test/test/test/beast/evolution/alignment/FilteredAlignmentTest.java b/test/test/beast/evolution/alignment/FilteredAlignmentTest.java similarity index 100% rename from test/test/test/beast/evolution/alignment/FilteredAlignmentTest.java rename to test/test/beast/evolution/alignment/FilteredAlignmentTest.java diff --git a/test/test/test/beast/evolution/alignment/UncertainAlignmentTest.java b/test/test/beast/evolution/alignment/UncertainAlignmentTest.java similarity index 100% rename from test/test/test/beast/evolution/alignment/UncertainAlignmentTest.java rename to test/test/beast/evolution/alignment/UncertainAlignmentTest.java diff --git a/test/test/test/beast/evolution/datatype/DataTypeDeEncodeTest.java b/test/test/beast/evolution/datatype/DataTypeDeEncodeTest.java similarity index 100% rename from test/test/test/beast/evolution/datatype/DataTypeDeEncodeTest.java rename to test/test/beast/evolution/datatype/DataTypeDeEncodeTest.java diff --git a/test/test/test/beast/evolution/datatype/IntegerDataTest.java b/test/test/beast/evolution/datatype/IntegerDataTest.java similarity index 100% rename from test/test/test/beast/evolution/datatype/IntegerDataTest.java rename to test/test/beast/evolution/datatype/IntegerDataTest.java diff --git a/test/test/test/beast/evolution/likelihood/TreeLikelihoodTest.java b/test/test/beast/evolution/likelihood/TreeLikelihoodTest.java similarity index 100% rename from test/test/test/beast/evolution/likelihood/TreeLikelihoodTest.java rename to test/test/beast/evolution/likelihood/TreeLikelihoodTest.java diff --git a/test/test/test/beast/evolution/operator/BactrianDeltaExchangeOperatorTest.java b/test/test/beast/evolution/operator/BactrianDeltaExchangeOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/BactrianDeltaExchangeOperatorTest.java rename to test/test/beast/evolution/operator/BactrianDeltaExchangeOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/BactrianIntervalOperatorTest.java b/test/test/beast/evolution/operator/BactrianIntervalOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/BactrianIntervalOperatorTest.java rename to test/test/beast/evolution/operator/BactrianIntervalOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/BactrianRandomWalkOperatorTest.java b/test/test/beast/evolution/operator/BactrianRandomWalkOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/BactrianRandomWalkOperatorTest.java rename to test/test/beast/evolution/operator/BactrianRandomWalkOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/BactrianScaleOperatorTest.java b/test/test/beast/evolution/operator/BactrianScaleOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/BactrianScaleOperatorTest.java rename to test/test/beast/evolution/operator/BactrianScaleOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/BactrianUpDownOperatorTest.java b/test/test/beast/evolution/operator/BactrianUpDownOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/BactrianUpDownOperatorTest.java rename to test/test/beast/evolution/operator/BactrianUpDownOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/CompoundParameterHelperTest.java b/test/test/beast/evolution/operator/CompoundParameterHelperTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/CompoundParameterHelperTest.java rename to test/test/beast/evolution/operator/CompoundParameterHelperTest.java diff --git a/test/test/test/beast/evolution/operator/DeltaExchangeOperatorTest.java b/test/test/beast/evolution/operator/DeltaExchangeOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/DeltaExchangeOperatorTest.java rename to test/test/beast/evolution/operator/DeltaExchangeOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/ExchangeOperatorTest.java b/test/test/beast/evolution/operator/ExchangeOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/ExchangeOperatorTest.java rename to test/test/beast/evolution/operator/ExchangeOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/IntRandomWalkOperatorTest.java b/test/test/beast/evolution/operator/IntRandomWalkOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/IntRandomWalkOperatorTest.java rename to test/test/beast/evolution/operator/IntRandomWalkOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/KernelDistiburionTest.java b/test/test/beast/evolution/operator/KernelDistiburionTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/KernelDistiburionTest.java rename to test/test/beast/evolution/operator/KernelDistiburionTest.java diff --git a/test/test/test/beast/evolution/operator/ScaleOperatorTest.java b/test/test/beast/evolution/operator/ScaleOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/ScaleOperatorTest.java rename to test/test/beast/evolution/operator/ScaleOperatorTest.java diff --git a/test/test/test/beast/evolution/operator/TestOperator.java b/test/test/beast/evolution/operator/TestOperator.java similarity index 100% rename from test/test/test/beast/evolution/operator/TestOperator.java rename to test/test/beast/evolution/operator/TestOperator.java diff --git a/test/test/test/beast/evolution/operator/UniformIntegerOperatorTest.java b/test/test/beast/evolution/operator/UniformIntegerOperatorTest.java similarity index 100% rename from test/test/test/beast/evolution/operator/UniformIntegerOperatorTest.java rename to test/test/beast/evolution/operator/UniformIntegerOperatorTest.java diff --git a/test/test/test/beast/evolution/speciation/BirthDeathGernhard08ModelTest.java b/test/test/beast/evolution/speciation/BirthDeathGernhard08ModelTest.java similarity index 100% rename from test/test/test/beast/evolution/speciation/BirthDeathGernhard08ModelTest.java rename to test/test/beast/evolution/speciation/BirthDeathGernhard08ModelTest.java diff --git a/test/test/test/beast/evolution/speciation/YuleModelTest.java b/test/test/beast/evolution/speciation/YuleModelTest.java similarity index 100% rename from test/test/test/beast/evolution/speciation/YuleModelTest.java rename to test/test/beast/evolution/speciation/YuleModelTest.java diff --git a/test/test/test/beast/evolution/substmodel/BinaryCovarionModelTest.java b/test/test/beast/evolution/substmodel/BinaryCovarionModelTest.java similarity index 100% rename from test/test/test/beast/evolution/substmodel/BinaryCovarionModelTest.java rename to test/test/beast/evolution/substmodel/BinaryCovarionModelTest.java diff --git a/test/test/test/beast/evolution/substmodel/GTRTest.java b/test/test/beast/evolution/substmodel/GTRTest.java similarity index 100% rename from test/test/test/beast/evolution/substmodel/GTRTest.java rename to test/test/beast/evolution/substmodel/GTRTest.java diff --git a/test/test/test/beast/evolution/substmodel/GeneralSubstitutionModelTest.java b/test/test/beast/evolution/substmodel/GeneralSubstitutionModelTest.java similarity index 100% rename from test/test/test/beast/evolution/substmodel/GeneralSubstitutionModelTest.java rename to test/test/beast/evolution/substmodel/GeneralSubstitutionModelTest.java diff --git a/test/test/test/beast/evolution/substmodel/HKYTest.java b/test/test/beast/evolution/substmodel/HKYTest.java similarity index 100% rename from test/test/test/beast/evolution/substmodel/HKYTest.java rename to test/test/beast/evolution/substmodel/HKYTest.java diff --git a/test/test/test/beast/evolution/tree/NodeTest.java b/test/test/beast/evolution/tree/NodeTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/NodeTest.java rename to test/test/beast/evolution/tree/NodeTest.java diff --git a/test/test/test/beast/evolution/tree/RandomTreeTest.java b/test/test/beast/evolution/tree/RandomTreeTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/RandomTreeTest.java rename to test/test/beast/evolution/tree/RandomTreeTest.java diff --git a/test/test/test/beast/evolution/tree/TraitSetTest.java b/test/test/beast/evolution/tree/TraitSetTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/TraitSetTest.java rename to test/test/beast/evolution/tree/TraitSetTest.java diff --git a/test/test/test/beast/evolution/tree/TreeTest.java b/test/test/beast/evolution/tree/TreeTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/TreeTest.java rename to test/test/beast/evolution/tree/TreeTest.java diff --git a/test/test/test/beast/evolution/tree/TreeUtilsTest.java b/test/test/beast/evolution/tree/TreeUtilsTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/TreeUtilsTest.java rename to test/test/beast/evolution/tree/TreeUtilsTest.java diff --git a/test/test/test/beast/evolution/tree/coalescent/BayesianSkylineTest.java b/test/test/beast/evolution/tree/coalescent/BayesianSkylineTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/coalescent/BayesianSkylineTest.java rename to test/test/beast/evolution/tree/coalescent/BayesianSkylineTest.java diff --git a/test/test/test/beast/evolution/tree/coalescent/CoalescentTest.java b/test/test/beast/evolution/tree/coalescent/CoalescentTest.java similarity index 100% rename from test/test/test/beast/evolution/tree/coalescent/CoalescentTest.java rename to test/test/beast/evolution/tree/coalescent/CoalescentTest.java diff --git a/test/test/test/beast/integration/DependencyTest.java b/test/test/beast/integration/DependencyTest.java similarity index 100% rename from test/test/test/beast/integration/DependencyTest.java rename to test/test/beast/integration/DependencyTest.java diff --git a/test/test/test/beast/integration/DocumentationTest.java b/test/test/beast/integration/DocumentationTest.java similarity index 100% rename from test/test/test/beast/integration/DocumentationTest.java rename to test/test/beast/integration/DocumentationTest.java diff --git a/test/test/test/beast/integration/InputTypeTest.java b/test/test/beast/integration/InputTypeTest.java similarity index 100% rename from test/test/test/beast/integration/InputTypeTest.java rename to test/test/beast/integration/InputTypeTest.java diff --git a/test/test/test/beast/integration/XMLElementNameTest.java b/test/test/beast/integration/XMLElementNameTest.java similarity index 100% rename from test/test/test/beast/integration/XMLElementNameTest.java rename to test/test/beast/integration/XMLElementNameTest.java diff --git a/test/test/test/beast/integration/XMLProducerTest.java b/test/test/beast/integration/XMLProducerTest.java similarity index 100% rename from test/test/test/beast/integration/XMLProducerTest.java rename to test/test/beast/integration/XMLProducerTest.java diff --git a/test/test/test/beast/math/distributions/GammaTest.java b/test/test/beast/math/distributions/GammaTest.java similarity index 100% rename from test/test/test/beast/math/distributions/GammaTest.java rename to test/test/beast/math/distributions/GammaTest.java diff --git a/test/test/test/beast/math/distributions/InvGammaTest.java b/test/test/beast/math/distributions/InvGammaTest.java similarity index 100% rename from test/test/test/beast/math/distributions/InvGammaTest.java rename to test/test/beast/math/distributions/InvGammaTest.java diff --git a/test/test/test/beast/math/distributions/LaplaceDistributionTest.java b/test/test/beast/math/distributions/LaplaceDistributionTest.java similarity index 100% rename from test/test/test/beast/math/distributions/LaplaceDistributionTest.java rename to test/test/beast/math/distributions/LaplaceDistributionTest.java diff --git a/test/test/test/beast/math/distributions/LogNormalDistributionModelTest.java b/test/test/beast/math/distributions/LogNormalDistributionModelTest.java similarity index 100% rename from test/test/test/beast/math/distributions/LogNormalDistributionModelTest.java rename to test/test/beast/math/distributions/LogNormalDistributionModelTest.java diff --git a/test/test/test/beast/math/distributions/MRCAPriorTest.java b/test/test/beast/math/distributions/MRCAPriorTest.java similarity index 100% rename from test/test/test/beast/math/distributions/MRCAPriorTest.java rename to test/test/beast/math/distributions/MRCAPriorTest.java diff --git a/test/test/test/beast/math/distributions/MeanOfParametricDistributionTest.java b/test/test/beast/math/distributions/MeanOfParametricDistributionTest.java similarity index 100% rename from test/test/test/beast/math/distributions/MeanOfParametricDistributionTest.java rename to test/test/beast/math/distributions/MeanOfParametricDistributionTest.java diff --git a/test/test/test/beast/math/distributions/NormalDistributionTest.java b/test/test/beast/math/distributions/NormalDistributionTest.java similarity index 100% rename from test/test/test/beast/math/distributions/NormalDistributionTest.java rename to test/test/beast/math/distributions/NormalDistributionTest.java diff --git a/test/test/test/beast/statistic/RPNCalculatorTest.java b/test/test/beast/statistic/RPNCalculatorTest.java similarity index 100% rename from test/test/test/beast/statistic/RPNCalculatorTest.java rename to test/test/beast/statistic/RPNCalculatorTest.java diff --git a/test/test/test/beast/util/AnnotatedRunnableTestClass.java b/test/test/beast/util/AnnotatedRunnableTestClass.java similarity index 100% rename from test/test/test/beast/util/AnnotatedRunnableTestClass.java rename to test/test/beast/util/AnnotatedRunnableTestClass.java diff --git a/test/test/test/beast/util/ClusterTreeTest.java b/test/test/beast/util/ClusterTreeTest.java similarity index 100% rename from test/test/test/beast/util/ClusterTreeTest.java rename to test/test/beast/util/ClusterTreeTest.java diff --git a/test/test/test/beast/util/NexusParserTest.java b/test/test/beast/util/NexusParserTest.java similarity index 100% rename from test/test/test/beast/util/NexusParserTest.java rename to test/test/beast/util/NexusParserTest.java diff --git a/test/test/test/beast/util/RandomizerTest.java b/test/test/beast/util/RandomizerTest.java similarity index 100% rename from test/test/test/beast/util/RandomizerTest.java rename to test/test/beast/util/RandomizerTest.java diff --git a/test/test/test/beast/util/TreeParserTest.java b/test/test/beast/util/TreeParserTest.java similarity index 100% rename from test/test/test/beast/util/TreeParserTest.java rename to test/test/beast/util/TreeParserTest.java diff --git a/test/test/test/beast/util/XMLParserTest.java b/test/test/beast/util/XMLParserTest.java similarity index 100% rename from test/test/test/beast/util/XMLParserTest.java rename to test/test/beast/util/XMLParserTest.java diff --git a/test/test/test/beast/util/XMLTest.java b/test/test/beast/util/XMLTest.java similarity index 100% rename from test/test/test/beast/util/XMLTest.java rename to test/test/beast/util/XMLTest.java